Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:30:45 (2436238): wrapper (7.7.26015): starting
02:30:45 (2436238): wrapper: running run_atlas (--nthreads 11)
[2026-01-14 02:30:46] Arguments: --nthreads 11
[2026-01-14 02:30:46] Threads: 11
[2026-01-14 02:30:46] Checking for CVMFS
[2026-01-14 02:30:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 02:30:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 02:30:47] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 02:30:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 02:30:48] 2.13.3.0 12161 100312 361844 155123 2 506 24121985 40960001 14840 16776704 0 268266662 99.544 319609601 37772 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-14 02:30:48] CVMFS is ok
[2026-01-14 02:30:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 02:30:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 02:30:48] Further information can be found at the LHC@home message board.
[2026-01-14 02:30:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 02:30:48] Checking for apptainer binary...
[2026-01-14 02:30:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 02:30:48] Running /usr/bin/apptainer --version
[2026-01-14 02:30:48] apptainer version 1.4.5-2.el9
[2026-01-14 02:30:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 02:30:49] c6-5-7-1.aglt2.org
[2026-01-14 02:30:49] apptainer works
[2026-01-14 02:30:49] Set ATHENA_PROC_NUMBER=11
[2026-01-14 02:30:49] Set ATHENA_CORE_NUMBER=11
[2026-01-14 02:30:49] Starting ATLAS job with PandaID=6969274995
[2026-01-14 02:30:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 05:08:51]  *** The last 200 lines of the pilot log: ***
[2026-01-14 05:08:51] 2026-01-14 10:08:11,114 | WARNING  | process 2458152 can no longer be monitored (due to stat problems) - aborting
[2026-01-14 05:08:51] 2026-01-14 10:08:11,115 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6969274995/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 05:08:51] 2026-01-14 10:08:11,407 | INFO     | number of running child processes to parent process 2458152: 1
[2026-01-14 05:08:51] 2026-01-14 10:08:11,407 | INFO     | maximum number of monitored processes: 6
[2026-01-14 05:08:51] 2026-01-14 10:08:12,461 | INFO     | time since job start (9404s) is within the limit (349056.0s)
[2026-01-14 05:08:51] 2026-01-14 10:08:13,912 | INFO     | monitor loop #590: job 0:6969274995 is in state 'finished'
[2026-01-14 05:08:51] 2026-01-14 10:08:13,912 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 05:08:51] 2026-01-14 10:08:14,197 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-14 05:08:51] 2026-01-14 10:08:14,205 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3004.7547500000005
[2026-01-14 05:08:51] 2026-01-14 10:08:14,214 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6969274995/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 05:08:51] 2026-01-14 10:08:14,215 | INFO     | extracted standard info from prmon json
[2026-01-14 05:08:51] 2026-01-14 10:08:14,215 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 05:08:51] 2026-01-14 10:08:14,215 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 05:08:51] 2026-01-14 10:08:14,215 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 05:08:51] 2026-01-14 10:08:14,215 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 05:08:51] 2026-01-14 10:08:14,218 | INFO     | fitting pss+swap vs Time
[2026-01-14 05:08:51] 2026-01-14 10:08:14,218 | INFO     | sum of square deviations: 1110325486.470585
[2026-01-14 05:08:51] 2026-01-14 10:08:14,219 | INFO     | sum of deviations: 23771021891.588264
[2026-01-14 05:08:51] 2026-01-14 10:08:14,219 | INFO     | mean x: 1768380632.72549
[2026-01-14 05:08:51] 2026-01-14 10:08:14,219 | INFO     | mean y: 2649754.4901960786
[2026-01-14 05:08:51] 2026-01-14 10:08:14,219 | INFO     | intersect: -37856712428.395226
[2026-01-14 05:08:51] 2026-01-14 10:08:14,220 | INFO     | chi2: 3.224948157741988
[2026-01-14 05:08:51] 2026-01-14 10:08:14,220 | INFO     | sum of square deviations: 1004962379.641893
[2026-01-14 05:08:51] 2026-01-14 10:08:14,221 | INFO     | sum of deviations: 33117606361.331078
[2026-01-14 05:08:51] 2026-01-14 10:08:14,221 | INFO     | mean x: 1768380480.2229729
[2026-01-14 05:08:51] 2026-01-14 10:08:14,221 | INFO     | mean y: 2662882.0202702703
[2026-01-14 05:08:51] 2026-01-14 10:08:14,221 | INFO     | intersect: -58272681377.09005
[2026-01-14 05:08:51] 2026-01-14 10:08:14,221 | INFO     | chi2: 2.535042478520604
[2026-01-14 05:08:51] 2026-01-14 10:08:14,221 | INFO     | current chi2=2.535042478520604 (change=21.392768053190515 %)
[2026-01-14 05:08:51] 2026-01-14 10:08:14,221 | INFO     | right removable region: 147
[2026-01-14 05:08:51] 2026-01-14 10:08:14,222 | INFO     | sum of square deviations: 1004931513.75
[2026-01-14 05:08:51] 2026-01-14 10:08:14,222 | INFO     | sum of deviations: -13822302004.500008
[2026-01-14 05:08:51] 2026-01-14 10:08:14,222 | INFO     | mean x: 1768380785.25
[2026-01-14 05:08:51] 2026-01-14 10:08:14,222 | INFO     | mean y: 2703703.9324324327
[2026-01-14 05:08:51] 2026-01-14 10:08:14,222 | INFO     | intersect: 24325847060.705658
[2026-01-14 05:08:51] 2026-01-14 10:08:14,223 | INFO     | chi2: 0.8438007183829048
[2026-01-14 05:08:51] 2026-01-14 10:08:14,223 | INFO     | current chi2=0.8438007183829048 (change=73.83521603728015 %)
[2026-01-14 05:08:51] 2026-01-14 10:08:14,223 | INFO     | sum of square deviations: 906421390.8391601
[2026-01-14 05:08:51] 2026-01-14 10:08:14,224 | INFO     | sum of deviations: -18138170806.265724
[2026-01-14 05:08:51] 2026-01-14 10:08:14,224 | INFO     | mean x: 1768380937.7762237
[2026-01-14 05:08:51] 2026-01-14 10:08:14,224 | INFO     | mean y: 2710220.804195804
[2026-01-14 05:08:51] 2026-01-14 10:08:14,224 | INFO     | intersect: 35389337041.50893
[2026-01-14 05:08:51] 2026-01-14 10:08:14,224 | INFO     | chi2: 0.7594172471918048
[2026-01-14 05:08:51] 2026-01-14 10:08:14,224 | INFO     | current chi2=0.7594172471918048 (change=10.000402862042597 %)
[2026-01-14 05:08:51] 2026-01-14 10:08:14,224 | INFO     | left removable region: 20
[2026-01-14 05:08:51] 2026-01-14 10:08:14,224 | INFO     | sum of square deviations: 634843881.2598407
[2026-01-14 05:08:51] 2026-01-14 10:08:14,225 | INFO     | sum of deviations: -5033546456.157478
[2026-01-14 05:08:51] 2026-01-14 10:08:14,225 | INFO     | mean x: 1768381059.7874017
[2026-01-14 05:08:51] 2026-01-14 10:08:14,225 | INFO     | mean y: 2720813.401574803
[2026-01-14 05:08:51] 2026-01-14 10:08:14,225 | INFO     | intersect: 14023850227.084341
[2026-01-14 05:08:51] 2026-01-14 10:08:14,225 | INFO     | chi2: 0.02513438958836569
[2026-01-14 05:08:51] 2026-01-14 10:08:14,226 | INFO     | current memory leak: -7.93 B/s (using 127 data points, chi2=0.03)
[2026-01-14 05:08:51] 2026-01-14 10:08:14,226 | INFO     | could have reported an average CPU frequency of 3022 MHz (9 samples)
[2026-01-14 05:08:51] 2026-01-14 10:08:14,226 | INFO     | ..............................
[2026-01-14 05:08:51] 2026-01-14 10:08:14,226 | INFO     | . Timing measurements:
[2026-01-14 05:08:51] 2026-01-14 10:08:14,226 | INFO     | . get job = 0 s
[2026-01-14 05:08:51] 2026-01-14 10:08:14,227 | INFO     | . initial setup = 4 s
[2026-01-14 05:08:51] 2026-01-14 10:08:14,227 | INFO     | . payload setup = 25 s
[2026-01-14 05:08:51] 2026-01-14 10:08:14,227 | INFO     | . stage-in = 0 s
[2026-01-14 05:08:51] 2026-01-14 10:08:14,227 | INFO     | . payload execution = 9313 s
[2026-01-14 05:08:51] 2026-01-14 10:08:14,227 | INFO     | . stage-out = 0 s
[2026-01-14 05:08:51] 2026-01-14 10:08:14,227 | INFO     | . log creation = 0 s
[2026-01-14 05:08:51] 2026-01-14 10:08:14,227 | INFO     | ..............................
[2026-01-14 05:08:51] 2026-01-14 10:08:14,315 | INFO     | 
[2026-01-14 05:08:51] 2026-01-14 10:08:14,315 | INFO     | job summary report
[2026-01-14 05:08:51] 2026-01-14 10:08:14,315 | INFO     | --------------------------------------------------
[2026-01-14 05:08:51] 2026-01-14 10:08:14,315 | INFO     | PanDA job id: 6969274995
[2026-01-14 05:08:51] 2026-01-14 10:08:14,315 | INFO     | task id: 48215263
[2026-01-14 05:08:51] 2026-01-14 10:08:14,315 | INFO     | errors: (none)
[2026-01-14 05:08:51] 2026-01-14 10:08:14,315 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 05:08:51] 2026-01-14 10:08:14,315 | INFO     | pilot state: finished 
[2026-01-14 05:08:51] 2026-01-14 10:08:14,316 | INFO     | transexitcode: 0
[2026-01-14 05:08:51] 2026-01-14 10:08:14,316 | INFO     | exeerrorcode: 0
[2026-01-14 05:08:51] 2026-01-14 10:08:14,316 | INFO     | exeerrordiag: 
[2026-01-14 05:08:51] 2026-01-14 10:08:14,316 | INFO     | exitcode: 0
[2026-01-14 05:08:51] 2026-01-14 10:08:14,316 | INFO     | exitmsg: OK
[2026-01-14 05:08:51] 2026-01-14 10:08:14,316 | INFO     | cpuconsumptiontime: 25803 s
[2026-01-14 05:08:51] 2026-01-14 10:08:14,316 | INFO     | nevents: 400
[2026-01-14 05:08:51] 2026-01-14 10:08:14,316 | INFO     | neventsw: 0
[2026-01-14 05:08:51] 2026-01-14 10:08:14,316 | INFO     | pid: 2458152
[2026-01-14 05:08:51] 2026-01-14 10:08:14,316 | INFO     | pgrp: 2458152
[2026-01-14 05:08:51] 2026-01-14 10:08:14,316 | INFO     | corecount: 11
[2026-01-14 05:08:51] 2026-01-14 10:08:14,316 | INFO     | event service: False
[2026-01-14 05:08:51] 2026-01-14 10:08:14,316 | INFO     | sizes: {0: 2283773, 1: 2283972, 12: 2283972, 22: 2283972, 23: 2284262, 33: 2284290, 9342: 2312752, 9344: 2321806, 9350: 2322008}
[2026-01-14 05:08:51] 2026-01-14 10:08:14,316 | INFO     | --------------------------------------------------
[2026-01-14 05:08:51] 2026-01-14 10:08:14,317 | INFO     | 
[2026-01-14 05:08:51] 2026-01-14 10:08:14,317 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-14 05:08:51] 2026-01-14 10:08:14,336 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 05:08:51] 2026-01-14 10:08:14,337 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 05:08:51] 2026-01-14 10:08:14,337 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 05:08:51] 2026-01-14 10:08:14,337 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 05:08:51] 2026-01-14 10:08:14,337 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 05:08:51] 2026-01-14 10:08:14,337 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 05:08:51] 2026-01-14 10:08:14,337 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 05:08:51] 2026-01-14 10:08:14,337 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 05:08:51] 2026-01-14 10:08:14,337 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 05:08:51] 2026-01-14 10:08:14,337 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 05:08:51] 2026-01-14 10:08:14,337 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 05:08:51] 2026-01-14 10:08:14,338 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 05:08:51] 2026-01-14 10:08:14,338 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 05:08:51] 2026-01-14 10:08:14,338 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 05:08:51] 2026-01-14 10:08:14,338 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 05:08:51] 2026-01-14 10:08:14,338 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 05:08:51] 2026-01-14 10:08:14,338 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 05:08:51] 2026-01-14 10:08:14,338 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 05:08:51] 2026-01-14 10:08:14,338 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 05:08:51] 2026-01-14 10:08:14,338 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 05:08:51] 2026-01-14 10:08:14,338 | INFO     | job 6969274995 has completed (purged errors)
[2026-01-14 05:08:51] 2026-01-14 10:08:14,339 | INFO     | overall cleanup function is called
[2026-01-14 05:08:51] 2026-01-14 10:08:15,350 | INFO     | --- collectZombieJob: --- 10, [2458152]
[2026-01-14 05:08:51] 2026-01-14 10:08:15,350 | INFO     | zombie collector waiting for pid 2458152
[2026-01-14 05:08:51] 2026-01-14 10:08:15,350 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 05:08:51] 2026-01-14 10:08:15,350 | INFO     | collected zombie processes
[2026-01-14 05:08:51] 2026-01-14 10:08:15,351 | INFO     | will attempt to kill all subprocesses of pid=2458152
[2026-01-14 05:08:51] 2026-01-14 10:08:15,713 | INFO     | process IDs to be killed: [2458152] (in reverse order)
[2026-01-14 05:08:51] 2026-01-14 10:08:15,808 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 05:08:51] 2026-01-14 10:08:15,808 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 05:08:51] 2026-01-14 10:08:15,820 | INFO     | did not find any defunct processes belonging to 2458152
[2026-01-14 05:08:51] 2026-01-14 10:08:15,832 | INFO     | did not find any defunct processes belonging to 2458152
[2026-01-14 05:08:51] 2026-01-14 10:08:15,832 | INFO     | ready for new job
[2026-01-14 05:08:51] 2026-01-14 10:08:15,832 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 05:08:51] 2026-01-14 10:08:15,834 | INFO     | ***************************************
[2026-01-14 05:08:51] 2026-01-14 10:08:15,834 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 05:08:51] 2026-01-14 10:08:15,834 | INFO     | ***************************************
[2026-01-14 05:08:51] 2026-01-14 10:08:15,834 | INFO     | 
[2026-01-14 05:08:51] 2026-01-14 10:08:15,838 | INFO     | architecture information:
[2026-01-14 05:08:51] 2026-01-14 10:08:15,838 | INFO     | executing command: cat /etc/os-release
[2026-01-14 05:08:51] 2026-01-14 10:08:15,853 | INFO     | cat /etc/os-release:
[2026-01-14 05:08:51] NAME="CentOS Linux"
[2026-01-14 05:08:51] VERSION="7 (Core)"
[2026-01-14 05:08:51] ID="centos"
[2026-01-14 05:08:51] ID_LIKE="rhel fedora"
[2026-01-14 05:08:51] VERSION_ID="7"
[2026-01-14 05:08:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 05:08:51] ANSI_COLOR="0;31"
[2026-01-14 05:08:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 05:08:51] HOME_URL="https://www.centos.org/"
[2026-01-14 05:08:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 05:08:51] 
[2026-01-14 05:08:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 05:08:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 05:08:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 05:08:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 05:08:51] 
[2026-01-14 05:08:51] 2026-01-14 10:08:15,853 | INFO     | ***************************************
[2026-01-14 05:08:51] 2026-01-14 10:08:16,356 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-14 05:08:51] 2026-01-14 10:08:16,373 | INFO     | sufficient remaining disk space (72924266496 B)
[2026-01-14 05:08:51] 2026-01-14 10:08:16,373 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 05:08:51] 2026-01-14 10:08:16,373 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 05:08:51] 2026-01-14 10:08:16,373 | INFO     | update_server=False
[2026-01-14 05:08:51] 2026-01-14 10:08:16,373 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 05:08:51] 2026-01-14 10:08:16,374 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 05:08:51] 2026-01-14 10:08:16,417 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-14 05:08:51] 2026-01-14 10:08:16,417 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-14 05:08:51] 2026-01-14 10:08:16,417 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 05:08:51] 2026-01-14 10:08:16,417 | INFO     | will abort loop
[2026-01-14 05:08:51] 2026-01-14 10:08:16,773 | INFO     | all data control threads have been joined
[2026-01-14 05:08:51] 2026-01-14 10:08:17,244 | INFO     | all job control threads have been joined
[2026-01-14 05:08:51] 2026-01-14 10:08:17,369 | INFO     | all payload control threads have been joined
[2026-01-14 05:08:51] 2026-01-14 10:08:17,378 | INFO     | [job] retrieve thread has finished
[2026-01-14 05:08:51] 2026-01-14 10:08:17,422 | INFO     | [job] job monitor thread has finished
[2026-01-14 05:08:51] 2026-01-14 10:08:17,428 | INFO     | [data] copytool_in thread has finished
[2026-01-14 05:08:51] 2026-01-14 10:08:17,626 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 05:08:51] 2026-01-14 10:08:17,779 | INFO     | [data] control thread has finished
[2026-01-14 05:08:51] 2026-01-14 10:08:17,785 | INFO     | [job] validate thread has finished
[2026-01-14 05:08:51] 2026-01-14 10:08:17,833 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 05:08:51] 2026-01-14 10:08:17,983 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 05:08:51] 2026-01-14 10:08:18,182 | INFO     | [payload] failed_post thread has finished
[2026-01-14 05:08:51] 2026-01-14 10:08:18,249 | INFO     | [job] control thread has finished
[2026-01-14 05:08:51] 2026-01-14 10:08:18,374 | INFO     | [payload] control thread has finished
[2026-01-14 05:08:51] 2026-01-14 10:08:18,379 | INFO     | [data] copytool_out thread has finished
[2026-01-14 05:08:51] 2026-01-14 10:08:18,524 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 05:08:51] 2026-01-14 10:08:18,730 | INFO     | [payload] validate_post thread has finished
[2026-01-14 05:08:51] 2026-01-14 10:08:18,926 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 05:08:51] 2026-01-14 10:08:19,328 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 05:08:51] 2026-01-14 10:08:20,334 | INFO     | [job] queue monitor thread has finished
[2026-01-14 05:08:51] 2026-01-14 10:08:22,933 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 05:08:51] 2026-01-14 10:08:43,882 | INFO     | [monitor] cgroup control has ended
[2026-01-14 05:08:51] 2026-01-14 10:08:45,747 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140359712704320)>', '<ExcThread(monitor, started 140358851749632)>']
[2026-01-14 05:08:51] 2026-01-14 10:08:45,884 | INFO     | PID=2442623 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-14 05:08:51] 2026-01-14 10:08:45,884 | INFO     | .. there are 16 such processes running
[2026-01-14 05:08:51] 2026-01-14 10:08:45,885 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 05:08:51] 2026-01-14 10:08:45,885 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 05:08:51] 2026-01-14 10:08:45,885 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 05:08:51] 2026-01-14 10:08:45,885 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 05:08:51] 2026-01-14 10:08:45,886 | INFO     | [monitor] control thread has ended
[2026-01-14 05:08:51] 2026-01-14 10:08:50,772 | INFO     | all workflow threads have been joined
[2026-01-14 05:08:51] 2026-01-14 10:08:50,772 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 05:08:51] 2026-01-14 10:08:50,773 | INFO     | traces error code: 0
[2026-01-14 05:08:51] 2026-01-14 10:08:50,773 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 05:08:51] 2026-01-14 10:08:50,916 [wrapper] ==== pilot stdout END ====
[2026-01-14 05:08:51] 2026-01-14 10:08:50,920 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 05:08:51] 2026-01-14 10:08:50,923 [wrapper] pilotpid: 2442623
[2026-01-14 05:08:51] 2026-01-14 10:08:50,925 [wrapper] Pilot exit status: 0
[2026-01-14 05:08:51] 2026-01-14 10:08:50,948 [wrapper] pandaids: 6969274995
[2026-01-14 05:08:51] 2026-01-14 10:08:51,010 [wrapper] cleanup supervisor_pilot 2905586 2442624
[2026-01-14 05:08:51] 2026-01-14 10:08:51,012 [wrapper] Test setup, not cleaning
[2026-01-14 05:08:51] 2026-01-14 10:08:51,014 [wrapper] apfmon messages muted
[2026-01-14 05:08:51] 2026-01-14 10:08:51,016 [wrapper] ==== wrapper stdout END ====
[2026-01-14 05:08:51] 2026-01-14 10:08:51,018 [wrapper] ==== wrapper stderr END ====
[2026-01-14 05:08:51]  *** Error codes and diagnostics ***
[2026-01-14 05:08:51]     "exeErrorCode": 0,
[2026-01-14 05:08:51]     "exeErrorDiag": "",
[2026-01-14 05:08:51]     "pilotErrorCode": 0,
[2026-01-14 05:08:51]     "pilotErrorDiag": "",
[2026-01-14 05:08:51]  *** Listing of results directory ***
[2026-01-14 05:08:51] total 744996
[2026-01-14 05:08:51] -rw-r--r--. 1 boincer umatlas    579449 Jan 13 18:46 pilot3.tar.gz
[2026-01-14 05:08:51] -rwx------. 1 boincer umatlas     36322 Jan 13 18:48 runpilot2-wrapper.sh
[2026-01-14 05:08:51] -rw-r--r--. 1 boincer umatlas      5112 Jan 13 18:49 queuedata.json
[2026-01-14 05:08:51] -rw-r--r--. 1 boincer umatlas       100 Jan 14 02:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 05:08:51] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 14 02:30 run_atlas
[2026-01-14 05:08:51] -rw-r--r--. 1 boincer umatlas       105 Jan 14 02:30 job.xml
[2026-01-14 05:08:51] -rw-r--r--. 2 boincer umatlas 601176029 Jan 14 02:30 EVNT.32794306._000358.pool.root.1
[2026-01-14 05:08:51] -rw-r--r--. 2 boincer umatlas    592388 Jan 14 02:30 input.tar.gz
[2026-01-14 05:08:51] -rw-r--r--. 2 boincer umatlas     15847 Jan 14 02:30 start_atlas.sh
[2026-01-14 05:08:51] drwxrwx--x. 2 boincer umatlas      4096 Jan 14 02:30 shared
[2026-01-14 05:08:51] -rw-r--r--. 1 boincer umatlas         0 Jan 14 02:30 boinc_lockfile
[2026-01-14 05:08:51] -rw-r--r--. 1 boincer umatlas      2504 Jan 14 02:30 pandaJob.out
[2026-01-14 05:08:51] -rw-------. 1 boincer umatlas        57 Jan 14 02:30 setup.sh.local
[2026-01-14 05:08:51] -rw-------. 1 boincer umatlas    997226 Jan 14 02:31 agis_schedconf.cvmfs.json
[2026-01-14 05:08:51] -rw-------. 1 boincer umatlas   1516246 Jan 14 02:31 agis_ddmendpoints.agis.ALL.json
[2026-01-14 05:08:51] drwx------. 5 boincer umatlas      4096 Jan 14 02:31 pilot3
[2026-01-14 05:08:51] -rw-r--r--. 1 boincer umatlas      6842 Jan 14 05:04 init_data.xml
[2026-01-14 05:08:51] -rw-r--r--. 1 boincer umatlas       530 Jan 14 05:07 boinc_task_state.xml
[2026-01-14 05:08:51] -rw-------. 1 boincer umatlas 154455888 Jan 14 05:07 HITS.48215263._008941.pool.root.1
[2026-01-14 05:08:51] -rw-------. 1 boincer umatlas      1037 Jan 14 05:08 memory_monitor_summary.json
[2026-01-14 05:08:51] -rw-------. 1 boincer umatlas    437821 Jan 14 05:08 log.48215263._008941.job.log.tgz.1
[2026-01-14 05:08:51] -rw-------. 1 boincer umatlas      7811 Jan 14 05:08 heartbeat.json
[2026-01-14 05:08:51] -rw-------. 1 boincer umatlas        95 Jan 14 05:08 pilot_heartbeat.json
[2026-01-14 05:08:51] -rw-r--r--. 1 boincer umatlas      8192 Jan 14 05:08 boinc_mmap_file
[2026-01-14 05:08:51] -rw-------. 1 boincer umatlas      5010 Jan 14 05:08 pilotlog.txt
[2026-01-14 05:08:51] -rw-r--r--. 1 boincer umatlas        27 Jan 14 05:08 wrapper_checkpoint.txt
[2026-01-14 05:08:51] -rw-------. 1 boincer umatlas   1220795 Jan 14 05:08 log.48215263._008941.job.log.1
[2026-01-14 05:08:51] -rw-------. 1 boincer umatlas       357 Jan 14 05:08 output.list
[2026-01-14 05:08:51] -rw-r--r--. 1 boincer umatlas       620 Jan 14 05:08 runtime_log
[2026-01-14 05:08:51] -rw-------. 1 boincer umatlas   1679360 Jan 14 05:08 result.tar.gz
[2026-01-14 05:08:51] -rw-r--r--. 1 boincer umatlas      9344 Jan 14 05:08 runtime_log.err
[2026-01-14 05:08:51] -rw-------. 1 boincer umatlas       652 Jan 14 05:08 gCIKDmUI3z8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmk8iKDmo4J2fn.diag
[2026-01-14 05:08:51] -rw-r--r--. 1 boincer umatlas     21413 Jan 14 05:08 stderr.txt
[2026-01-14 05:08:51] HITS file was successfully produced:
[2026-01-14 05:08:51] -rw-------. 1 boincer umatlas 154455888 Jan 14 05:07 shared/HITS.pool.root.1
[2026-01-14 05:08:51]  *** Contents of shared directory: ***
[2026-01-14 05:08:51] total 740168
[2026-01-14 05:08:51] -rw-r--r--. 2 boincer umatlas 601176029 Jan 14 02:30 ATLAS.root_0
[2026-01-14 05:08:51] -rw-r--r--. 2 boincer umatlas    592388 Jan 14 02:30 input.tar.gz
[2026-01-14 05:08:51] -rw-r--r--. 2 boincer umatlas     15847 Jan 14 02:30 start_atlas.sh
[2026-01-14 05:08:51] -rw-------. 1 boincer umatlas 154455888 Jan 14 05:07 HITS.pool.root.1
[2026-01-14 05:08:51] -rw-------. 1 boincer umatlas   1679360 Jan 14 05:08 result.tar.gz
05:08:52 (2436238): run_atlas exited; CPU time 26035.930618
05:08:52 (2436238): called boinc_finish(0)

</stderr_txt>
]]>

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