Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:39:48 (3484231): wrapper (7.7.26015): starting
09:39:48 (3484231): wrapper: running run_atlas (--nthreads 3)
[2026-01-14 09:39:48] Arguments: --nthreads 3
[2026-01-14 09:39:48] Threads: 3
[2026-01-14 09:39:48] Checking for CVMFS
[2026-01-14 09:39:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 09:39:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 09:39:48] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 09:39:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 09:39:48] 2.9.2.0 3329477 390 68272 155124 3 57 20817479 36864001 0 130560 0 421702 99.990 19233 602 http://cvmfs-egi.gridpp.rl.ac.uk:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-14 09:39:48] CVMFS is ok
[2026-01-14 09:39:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 09:39:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 09:39:48] Further information can be found at the LHC@home message board.
[2026-01-14 09:39:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 09:39:48] Checking for apptainer binary...
[2026-01-14 09:39:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 09:39:48] Running /usr/bin/apptainer --version
[2026-01-14 09:39:48] apptainer version 1.4.1-1.1
[2026-01-14 09:39:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 09:39:48] magicA252
[2026-01-14 09:39:48] apptainer works
[2026-01-14 09:39:48] Set ATHENA_PROC_NUMBER=3
[2026-01-14 09:39:48] Set ATHENA_CORE_NUMBER=3
[2026-01-14 09:39:48] Starting ATLAS job with PandaID=6969273912
[2026-01-14 09:39:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 10:36:03]  *** The last 200 lines of the pilot log: ***
[2026-01-14 10:36:03] 2026-01-14 09:35:08,313 | INFO     | update_server=False
[2026-01-14 10:36:03] 2026-01-14 09:35:08,313 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 10:36:03] 2026-01-14 09:35:08,313 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 10:36:03] 2026-01-14 09:35:08,313 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 10:36:03] 2026-01-14 09:35:08,314 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 10:36:03] 2026-01-14 09:35:08,314 | INFO     | aborting loop
[2026-01-14 10:36:03] 2026-01-14 09:35:08,314 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 10:36:03] 2026-01-14 09:35:08,799 | INFO     | all payload control threads have been joined
[2026-01-14 10:36:03] 2026-01-14 09:35:09,021 | INFO     | all data control threads have been joined
[2026-01-14 10:36:03] 2026-01-14 09:35:09,318 | INFO     | [job] retrieve thread has finished
[2026-01-14 10:36:03] 2026-01-14 09:35:09,319 | INFO     | [job] job monitor thread has finished
[2026-01-14 10:36:03] 2026-01-14 09:35:09,319 | INFO     | [job] queue monitor thread has finished
[2026-01-14 10:36:03] 2026-01-14 09:35:09,329 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 10:36:03] 2026-01-14 09:35:09,331 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 10:36:03] 2026-01-14 09:35:09,385 | INFO     | all job control threads have been joined
[2026-01-14 10:36:03] 2026-01-14 09:35:09,603 | INFO     | [payload] validate_post thread has finished
[2026-01-14 10:36:03] 2026-01-14 09:35:09,805 | INFO     | [payload] control thread has finished
[2026-01-14 10:36:03] 2026-01-14 09:35:10,027 | INFO     | [data] control thread has finished
[2026-01-14 10:36:03] 2026-01-14 09:35:10,124 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 10:36:03] 2026-01-14 09:35:10,319 | INFO     | [data] copytool_out thread has finished
[2026-01-14 10:36:03] 2026-01-14 09:35:10,390 | INFO     | [job] control thread has finished
[2026-01-14 10:36:03] 2026-01-14 09:35:10,500 | INFO     | [data] copytool_in thread has finished
[2026-01-14 10:36:03] 2026-01-14 09:35:10,674 | INFO     | [payload] failed_post thread has finished
[2026-01-14 10:36:03] 2026-01-14 09:35:10,710 | INFO     | [job] validate thread has finished
[2026-01-14 10:36:03] 2026-01-14 09:35:12,320 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 10:36:03] 2026-01-14 09:35:19,031 | INFO     | job.realtimelogging is not enabled
[2026-01-14 10:36:03] 2026-01-14 09:35:20,037 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 10:36:03] 2026-01-14 09:35:38,777 | INFO     | PID=3487957 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-14 10:36:03] 2026-01-14 09:35:38,777 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 10:36:03] 2026-01-14 09:35:38,777 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 10:36:03] 2026-01-14 09:35:38,777 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 10:36:03] 2026-01-14 09:35:57,984 | INFO     | [monitor] cgroup control has ended
[2026-01-14 10:36:03] 2026-01-14 09:35:58,114 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140137198270272)>', '<ExcThread(monitor, started 140136570406656)>']
[2026-01-14 10:36:03] 2026-01-14 09:35:58,844 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 10:36:03] 2026-01-14 09:35:58,844 | INFO     | [monitor] control thread has ended
[2026-01-14 10:36:03] 2026-01-14 09:36:03,140 | INFO     | all workflow threads have been joined
[2026-01-14 10:36:03] 2026-01-14 09:36:03,140 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 10:36:03] 2026-01-14 09:36:03,140 | INFO     | traces error code: 0
[2026-01-14 10:36:03] 2026-01-14 09:36:03,140 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 10:36:03] 2026-01-14 09:36:03,191 [wrapper] ==== pilot stdout END ====
[2026-01-14 10:36:03] 2026-01-14 09:36:03,193 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 10:36:03] 2026-01-14 09:36:03,196 [wrapper] pilotpid: 3487957
[2026-01-14 10:36:03] 2026-01-14 09:36:03,198 [wrapper] Pilot exit status: 0
[2026-01-14 10:36:03] 2026-01-14 09:36:03,206 [wrapper] pandaids: 6969273912
[2026-01-14 10:36:03] 2026-01-14 09:36:03,225 [wrapper] cleanup supervisor_pilot 3503588 3487958
[2026-01-14 10:36:03] 2026-01-14 09:36:03,227 [wrapper] Test setup, not cleaning
[2026-01-14 10:36:03] 2026-01-14 09:36:03,230 [wrapper] apfmon messages muted
[2026-01-14 10:36:03] 2026-01-14 09:36:03,232 [wrapper] ==== wrapper stdout END ====
[2026-01-14 10:36:03] 2026-01-14 09:36:03,235 [wrapper] ==== wrapper stderr END ====
[2026-01-14 10:36:03]  *** Error codes and diagnostics ***
[2026-01-14 10:36:03]     "exeErrorCode": 0,
[2026-01-14 10:36:03]     "exeErrorDiag": "",
[2026-01-14 10:36:03]     "pilotErrorCode": 0,
[2026-01-14 10:36:03]     "pilotErrorDiag": "",
[2026-01-14 10:36:03]  *** Listing of results directory ***
[2026-01-14 10:36:03] total 738036
[2026-01-14 10:36:03] -rw-r--r-- 1 boinc boinc    579449 Jan 14 00:46 pilot3.tar.gz
[2026-01-14 10:36:03] -rwx------ 1 boinc boinc     36322 Jan 14 00:47 runpilot2-wrapper.sh
[2026-01-14 10:36:03] -rw-r--r-- 1 boinc boinc      5112 Jan 14 00:49 queuedata.json
[2026-01-14 10:36:03] -rw-r--r-- 1 boinc boinc       100 Jan 14 09:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 10:36:03] -rwxr-xr-x 1 boinc boinc      7986 Jan 14 09:39 run_atlas
[2026-01-14 10:36:03] -rw-r--r-- 1 boinc boinc       105 Jan 14 09:39 job.xml
[2026-01-14 10:36:03] -rw-r--r-- 2 boinc boinc 594691891 Jan 14 09:39 EVNT.32794306._000326.pool.root.1
[2026-01-14 10:36:03] -rw-r--r-- 2 boinc boinc    592396 Jan 14 09:39 input.tar.gz
[2026-01-14 10:36:03] -rw-r--r-- 2 boinc boinc     15847 Jan 14 09:39 start_atlas.sh
[2026-01-14 10:36:03] drwxrwx--x 2 boinc boinc      4096 Jan 14 09:39 shared
[2026-01-14 10:36:03] -rw-r--r-- 1 boinc boinc         0 Jan 14 09:39 boinc_setup_complete
[2026-01-14 10:36:03] -rw-r--r-- 1 boinc boinc      6448 Jan 14 09:39 init_data.xml
[2026-01-14 10:36:03] -rw-r--r-- 1 boinc boinc         0 Jan 14 09:39 boinc_lockfile
[2026-01-14 10:36:03] -rw-r--r-- 1 boinc boinc      2504 Jan 14 09:39 pandaJob.out
[2026-01-14 10:36:03] -rw------- 1 boinc boinc    997218 Jan 14 09:39 agis_schedconf.cvmfs.json
[2026-01-14 10:36:03] -rw------- 1 boinc boinc   1516246 Jan 14 09:39 agis_ddmendpoints.agis.ALL.json
[2026-01-14 10:36:03] drwx------ 5 boinc boinc      4096 Jan 14 09:39 pilot3
[2026-01-14 10:36:03] -rw------- 1 boinc boinc 155671064 Jan 14 10:34 HITS.48215263._008144.pool.root.1
[2026-01-14 10:36:03] -rw-r--r-- 1 boinc boinc       529 Jan 14 10:34 boinc_task_state.xml
[2026-01-14 10:36:03] -rw------- 1 boinc boinc      1016 Jan 14 10:34 memory_monitor_summary.json
[2026-01-14 10:36:03] -rw------- 1 boinc boinc    238688 Jan 14 10:34 log.48215263._008144.job.log.tgz.1
[2026-01-14 10:36:03] -rw------- 1 boinc boinc      7743 Jan 14 10:35 heartbeat.json
[2026-01-14 10:36:03] -rw------- 1 boinc boinc        95 Jan 14 10:35 pilot_heartbeat.json
[2026-01-14 10:36:03] -rw-r--r-- 1 boinc boinc      8192 Jan 14 10:35 boinc_mmap_file
[2026-01-14 10:36:03] -rw-r--r-- 1 boinc boinc        26 Jan 14 10:35 wrapper_checkpoint.txt
[2026-01-14 10:36:03] -rw------- 1 boinc boinc      4824 Jan 14 10:36 pilotlog.txt
[2026-01-14 10:36:03] -rw------- 1 boinc boinc    502946 Jan 14 10:36 log.48215263._008144.job.log.1
[2026-01-14 10:36:03] -rw------- 1 boinc boinc       357 Jan 14 10:36 output.list
[2026-01-14 10:36:03] -rw-r--r-- 1 boinc boinc       620 Jan 14 10:36 runtime_log
[2026-01-14 10:36:03] -rw------- 1 boinc boinc    757760 Jan 14 10:36 result.tar.gz
[2026-01-14 10:36:03] -rw-r--r-- 1 boinc boinc      8912 Jan 14 10:36 runtime_log.err
[2026-01-14 10:36:03] -rw------- 1 boinc boinc       659 Jan 14 10:36 S2aLDmII3z8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmy6iKDmSQ5p3n.diag
[2026-01-14 10:36:03] -rw-r--r-- 1 boinc boinc      7508 Jan 14 10:36 stderr.txt
[2026-01-14 10:36:03] HITS file was successfully produced:
[2026-01-14 10:36:03] -rw------- 1 boinc boinc 155671064 Jan 14 10:34 shared/HITS.pool.root.1
[2026-01-14 10:36:03]  *** Contents of shared directory: ***
[2026-01-14 10:36:03] total 734124
[2026-01-14 10:36:03] -rw-r--r-- 2 boinc boinc 594691891 Jan 14 09:39 ATLAS.root_0
[2026-01-14 10:36:03] -rw-r--r-- 2 boinc boinc    592396 Jan 14 09:39 input.tar.gz
[2026-01-14 10:36:03] -rw-r--r-- 2 boinc boinc     15847 Jan 14 09:39 start_atlas.sh
[2026-01-14 10:36:03] -rw------- 1 boinc boinc 155671064 Jan 14 10:34 HITS.pool.root.1
[2026-01-14 10:36:03] -rw------- 1 boinc boinc    757760 Jan 14 10:36 result.tar.gz
10:36:04 (3484231): run_atlas exited; CPU time 9231.223133
10:36:04 (3484231): called boinc_finish(0)

</stderr_txt>
]]>

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