Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:45:55 (579): wrapper (7.7.26015): starting
01:45:55 (579): wrapper: running run_atlas (--nthreads 8)
[2026-01-14 01:45:55] Arguments: --nthreads 8
[2026-01-14 01:45:55] Threads: 8
[2026-01-14 01:45:55] Checking for CVMFS
[2026-01-14 01:45:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 01:45:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 01:45:55] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 01:45:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 01:45:55] 2.11.2.0 8318 187967 130404 155121 0 57 13985016 18432000 1833 130560 0 124450219 99.979 7424491 31674 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-14 01:45:55] CVMFS is ok
[2026-01-14 01:45:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 01:45:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 01:45:55] Further information can be found at the LHC@home message board.
[2026-01-14 01:45:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 01:45:55] Checking for apptainer binary...
[2026-01-14 01:45:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 01:45:55] Running /usr/bin/apptainer --version
[2026-01-14 01:45:55] apptainer version 1.3.2-1.el7
[2026-01-14 01:45:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 01:45:56] c-206-28.aglt2.org
[2026-01-14 01:45:56] apptainer works
[2026-01-14 01:45:56] Set ATHENA_PROC_NUMBER=8
[2026-01-14 01:45:56] Set ATHENA_CORE_NUMBER=8
[2026-01-14 01:45:56] Starting ATLAS job with PandaID=6969273105
[2026-01-14 01:45:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 03:39:24]  *** The last 200 lines of the pilot log: ***
[2026-01-14 03:39:24] 2026-01-14 08:38:35,202 | INFO     | maximum number of monitored processes: 6
[2026-01-14 03:39:24] 2026-01-14 08:38:35,290 | INFO     | time since job start (6748s) is within the limit (349056.0s)
[2026-01-14 03:39:24] 2026-01-14 08:38:36,709 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-14 03:39:24] 2026-01-14 08:38:36,713 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2394.7083333333335
[2026-01-14 03:39:24] 2026-01-14 08:38:36,715 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6969273105/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 03:39:24] 2026-01-14 08:38:36,716 | INFO     | extracted standard info from prmon json
[2026-01-14 03:39:24] 2026-01-14 08:38:36,716 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 03:39:24] 2026-01-14 08:38:36,716 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 03:39:24] 2026-01-14 08:38:36,716 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 03:39:24] 2026-01-14 08:38:36,716 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 03:39:24] 2026-01-14 08:38:36,718 | INFO     | fitting pss+swap vs Time
[2026-01-14 03:39:24] 2026-01-14 08:38:36,718 | INFO     | sum of square deviations: 424045160.0
[2026-01-14 03:39:24] 2026-01-14 08:38:36,719 | INFO     | sum of deviations: 904179880.9999971
[2026-01-14 03:39:24] 2026-01-14 08:38:36,719 | INFO     | mean x: 1768376547.0
[2026-01-14 03:39:24] 2026-01-14 08:38:36,719 | INFO     | mean y: 2493147.603603604
[2026-01-14 03:39:24] 2026-01-14 08:38:36,719 | INFO     | intersect: -3768167731.604747
[2026-01-14 03:39:24] 2026-01-14 08:38:36,719 | INFO     | chi2: 2.2129730077040746
[2026-01-14 03:39:24] 2026-01-14 08:38:36,720 | INFO     | sum of square deviations: 369281342.5
[2026-01-14 03:39:24] 2026-01-14 08:38:36,720 | INFO     | sum of deviations: 8075703318.999997
[2026-01-14 03:39:24] 2026-01-14 08:38:36,720 | INFO     | mean x: 1768376394.5
[2026-01-14 03:39:24] 2026-01-14 08:38:36,720 | INFO     | mean y: 2512368.396226415
[2026-01-14 03:39:24] 2026-01-14 08:38:36,720 | INFO     | intersect: -38669582521.70751
[2026-01-14 03:39:24] 2026-01-14 08:38:36,721 | INFO     | chi2: 1.4475937684380045
[2026-01-14 03:39:24] 2026-01-14 08:38:36,721 | INFO     | current chi2=1.4475937684380045 (change=34.586017841227054 %)
[2026-01-14 03:39:24] 2026-01-14 08:38:36,721 | INFO     | sum of square deviations: 319447850.0
[2026-01-14 03:39:24] 2026-01-14 08:38:36,721 | INFO     | sum of deviations: 7724561333.0
[2026-01-14 03:39:24] 2026-01-14 08:38:36,721 | INFO     | mean x: 1768376242.0
[2026-01-14 03:39:24] 2026-01-14 08:38:36,721 | INFO     | mean y: 2511294.1584158414
[2026-01-14 03:39:24] 2026-01-14 08:38:36,722 | INFO     | intersect: -42758555155.80846
[2026-01-14 03:39:24] 2026-01-14 08:38:36,722 | INFO     | chi2: 1.4506675688423563
[2026-01-14 03:39:24] 2026-01-14 08:38:36,722 | INFO     | current chi2=1.4506675688423563 (change=-0.21233860433569765 %)
[2026-01-14 03:39:24] 2026-01-14 08:38:36,722 | INFO     | right removable region: 100
[2026-01-14 03:39:24] 2026-01-14 08:38:36,722 | INFO     | sum of square deviations: 369281342.5
[2026-01-14 03:39:24] 2026-01-14 08:38:36,723 | INFO     | sum of deviations: -14778809007.5
[2026-01-14 03:39:24] 2026-01-14 08:38:36,723 | INFO     | mean x: 1768376699.5
[2026-01-14 03:39:24] 2026-01-14 08:38:36,723 | INFO     | mean y: 2535900.2735849055
[2026-01-14 03:39:24] 2026-01-14 08:38:36,723 | INFO     | intersect: 70773783963.59464
[2026-01-14 03:39:24] 2026-01-14 08:38:36,723 | INFO     | chi2: 0.8794770670992618
[2026-01-14 03:39:24] 2026-01-14 08:38:36,723 | INFO     | current chi2=0.8794770670992618 (change=60.25812045436082 %)
[2026-01-14 03:39:24] 2026-01-14 08:38:36,724 | INFO     | sum of square deviations: 319447850.0
[2026-01-14 03:39:24] 2026-01-14 08:38:36,724 | INFO     | sum of deviations: -12784694516.0
[2026-01-14 03:39:24] 2026-01-14 08:38:36,724 | INFO     | mean x: 1768376852.0
[2026-01-14 03:39:24] 2026-01-14 08:38:36,724 | INFO     | mean y: 2529652.1386138615
[2026-01-14 03:39:24] 2026-01-14 08:38:36,724 | INFO     | intersect: 70775138833.84305
[2026-01-14 03:39:24] 2026-01-14 08:38:36,725 | INFO     | chi2: 0.8668697991121785
[2026-01-14 03:39:24] 2026-01-14 08:38:36,725 | INFO     | current chi2=0.8668697991121785 (change=1.4334959328348595 %)
[2026-01-14 03:39:24] 2026-01-14 08:38:36,725 | INFO     | left removable region: 20
[2026-01-14 03:39:24] 2026-01-14 08:38:36,725 | INFO     | sum of square deviations: 158737860.0
[2026-01-14 03:39:24] 2026-01-14 08:38:36,725 | INFO     | sum of deviations: 529886687.0
[2026-01-14 03:39:24] 2026-01-14 08:38:36,725 | INFO     | mean x: 1768376821.5
[2026-01-14 03:39:24] 2026-01-14 08:38:36,725 | INFO     | mean y: 2527439.275
[2026-01-14 03:39:24] 2026-01-14 08:38:36,726 | INFO     | intersect: -5900533968.45864
[2026-01-14 03:39:24] 2026-01-14 08:38:36,726 | INFO     | chi2: 0.00014887376946435475
[2026-01-14 03:39:24] 2026-01-14 08:38:36,726 | INFO     | current memory leak: 3.34 B/s (using 80 data points, chi2=0.00)
[2026-01-14 03:39:24] 2026-01-14 08:38:36,726 | INFO     | could have reported an average CPU frequency of 2527 MHz (7 samples)
[2026-01-14 03:39:24] 2026-01-14 08:38:36,726 | INFO     | ..............................
[2026-01-14 03:39:24] 2026-01-14 08:38:36,726 | INFO     | . Timing measurements:
[2026-01-14 03:39:24] 2026-01-14 08:38:36,727 | INFO     | . get job = 0 s
[2026-01-14 03:39:24] 2026-01-14 08:38:36,727 | INFO     | . initial setup = 2 s
[2026-01-14 03:39:24] 2026-01-14 08:38:36,727 | INFO     | . payload setup = 4 s
[2026-01-14 03:39:24] 2026-01-14 08:38:36,727 | INFO     | . stage-in = 0 s
[2026-01-14 03:39:24] 2026-01-14 08:38:36,727 | INFO     | . payload execution = 6720 s
[2026-01-14 03:39:24] 2026-01-14 08:38:36,727 | INFO     | . stage-out = 0 s
[2026-01-14 03:39:24] 2026-01-14 08:38:36,727 | INFO     | . log creation = 0 s
[2026-01-14 03:39:24] 2026-01-14 08:38:36,727 | INFO     | ..............................
[2026-01-14 03:39:24] 2026-01-14 08:38:37,094 | INFO     | 
[2026-01-14 03:39:24] 2026-01-14 08:38:37,094 | INFO     | job summary report
[2026-01-14 03:39:24] 2026-01-14 08:38:37,094 | INFO     | --------------------------------------------------
[2026-01-14 03:39:24] 2026-01-14 08:38:37,094 | INFO     | PanDA job id: 6969273105
[2026-01-14 03:39:24] 2026-01-14 08:38:37,094 | INFO     | task id: 48215263
[2026-01-14 03:39:24] 2026-01-14 08:38:37,094 | INFO     | errors: (none)
[2026-01-14 03:39:24] 2026-01-14 08:38:37,094 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 03:39:24] 2026-01-14 08:38:37,094 | INFO     | pilot state: finished 
[2026-01-14 03:39:24] 2026-01-14 08:38:37,094 | INFO     | transexitcode: 0
[2026-01-14 03:39:24] 2026-01-14 08:38:37,095 | INFO     | exeerrorcode: 0
[2026-01-14 03:39:24] 2026-01-14 08:38:37,095 | INFO     | exeerrordiag: 
[2026-01-14 03:39:24] 2026-01-14 08:38:37,095 | INFO     | exitcode: 0
[2026-01-14 03:39:24] 2026-01-14 08:38:37,095 | INFO     | exitmsg: OK
[2026-01-14 03:39:24] 2026-01-14 08:38:37,095 | INFO     | cpuconsumptiontime: 49964 s
[2026-01-14 03:39:24] 2026-01-14 08:38:37,095 | INFO     | nevents: 400
[2026-01-14 03:39:24] 2026-01-14 08:38:37,095 | INFO     | neventsw: 0
[2026-01-14 03:39:24] 2026-01-14 08:38:37,095 | INFO     | pid: 10903
[2026-01-14 03:39:24] 2026-01-14 08:38:37,095 | INFO     | pgrp: 10903
[2026-01-14 03:39:24] 2026-01-14 08:38:37,095 | INFO     | corecount: 8
[2026-01-14 03:39:24] 2026-01-14 08:38:37,095 | INFO     | event service: False
[2026-01-14 03:39:24] 2026-01-14 08:38:37,096 | INFO     | sizes: {0: 2283117, 1: 2283973, 2: 2283973, 5: 2284263, 13: 2284319, 6728: 2311559, 6730: 2320613, 6734: 2320751}
[2026-01-14 03:39:24] 2026-01-14 08:38:37,096 | INFO     | --------------------------------------------------
[2026-01-14 03:39:24] 2026-01-14 08:38:37,096 | INFO     | 
[2026-01-14 03:39:24] 2026-01-14 08:38:37,096 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-14 03:39:24] 2026-01-14 08:38:37,124 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 03:39:24] 2026-01-14 08:38:37,125 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 03:39:24] 2026-01-14 08:38:37,125 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 03:39:24] 2026-01-14 08:38:37,125 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 03:39:24] 2026-01-14 08:38:37,125 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 03:39:24] 2026-01-14 08:38:37,126 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 03:39:24] 2026-01-14 08:38:37,126 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 03:39:24] 2026-01-14 08:38:37,126 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 03:39:24] 2026-01-14 08:38:37,126 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 03:39:24] 2026-01-14 08:38:37,126 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 03:39:24] 2026-01-14 08:38:37,126 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 03:39:24] 2026-01-14 08:38:37,127 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 03:39:24] 2026-01-14 08:38:37,127 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 03:39:24] 2026-01-14 08:38:37,127 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 03:39:24] 2026-01-14 08:38:37,127 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 03:39:24] 2026-01-14 08:38:37,127 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 03:39:24] 2026-01-14 08:38:37,128 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 03:39:24] 2026-01-14 08:38:37,128 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 03:39:24] 2026-01-14 08:38:37,128 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 03:39:24] 2026-01-14 08:38:37,128 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 03:39:24] 2026-01-14 08:38:37,128 | INFO     | job 6969273105 has completed (purged errors)
[2026-01-14 03:39:24] 2026-01-14 08:38:37,129 | INFO     | overall cleanup function is called
[2026-01-14 03:39:24] 2026-01-14 08:38:38,137 | INFO     | --- collectZombieJob: --- 10, [10903]
[2026-01-14 03:39:24] 2026-01-14 08:38:38,138 | INFO     | zombie collector waiting for pid 10903
[2026-01-14 03:39:24] 2026-01-14 08:38:38,138 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 03:39:24] 2026-01-14 08:38:38,138 | INFO     | collected zombie processes
[2026-01-14 03:39:24] 2026-01-14 08:38:38,138 | INFO     | will attempt to kill all subprocesses of pid=10903
[2026-01-14 03:39:24] 2026-01-14 08:38:38,305 | INFO     | process IDs to be killed: [10903] (in reverse order)
[2026-01-14 03:39:24] 2026-01-14 08:38:38,352 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 03:39:24] 2026-01-14 08:38:38,352 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 03:39:24] 2026-01-14 08:38:38,355 | INFO     | did not find any defunct processes belonging to 10903
[2026-01-14 03:39:24] 2026-01-14 08:38:38,357 | INFO     | did not find any defunct processes belonging to 10903
[2026-01-14 03:39:24] 2026-01-14 08:38:38,358 | INFO     | ready for new job
[2026-01-14 03:39:24] 2026-01-14 08:38:38,358 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 03:39:24] 2026-01-14 08:38:38,359 | INFO     | ***************************************
[2026-01-14 03:39:24] 2026-01-14 08:38:38,359 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 03:39:24] 2026-01-14 08:38:38,359 | INFO     | ***************************************
[2026-01-14 03:39:24] 2026-01-14 08:38:38,359 | INFO     | 
[2026-01-14 03:39:24] 2026-01-14 08:38:38,360 | INFO     | architecture information:
[2026-01-14 03:39:24] 2026-01-14 08:38:38,360 | INFO     | executing command: cat /etc/os-release
[2026-01-14 03:39:24] 2026-01-14 08:38:38,370 | INFO     | cat /etc/os-release:
[2026-01-14 03:39:24] NAME="CentOS Linux"
[2026-01-14 03:39:24] VERSION="7 (Core)"
[2026-01-14 03:39:24] ID="centos"
[2026-01-14 03:39:24] ID_LIKE="rhel fedora"
[2026-01-14 03:39:24] VERSION_ID="7"
[2026-01-14 03:39:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 03:39:24] ANSI_COLOR="0;31"
[2026-01-14 03:39:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 03:39:24] HOME_URL="https://www.centos.org/"
[2026-01-14 03:39:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 03:39:24] 
[2026-01-14 03:39:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 03:39:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 03:39:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 03:39:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 03:39:24] 
[2026-01-14 03:39:24] 2026-01-14 08:38:38,370 | INFO     | ***************************************
[2026-01-14 03:39:24] 2026-01-14 08:38:38,873 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-14 03:39:24] 2026-01-14 08:38:38,896 | INFO     | sufficient remaining disk space (25891438592 B)
[2026-01-14 03:39:24] 2026-01-14 08:38:38,896 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 03:39:24] 2026-01-14 08:38:38,897 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 03:39:24] 2026-01-14 08:38:38,897 | INFO     | update_server=False
[2026-01-14 03:39:24] 2026-01-14 08:38:38,897 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 03:39:24] 2026-01-14 08:38:38,897 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 03:39:24] 2026-01-14 08:38:38,898 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 03:39:24] 2026-01-14 08:38:38,898 | INFO     | aborting loop
[2026-01-14 03:39:24] 2026-01-14 08:38:39,157 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 03:39:24] 2026-01-14 08:38:39,320 | INFO     | all payload control threads have been joined
[2026-01-14 03:39:24] 2026-01-14 08:38:39,535 | INFO     | all data control threads have been joined
[2026-01-14 03:39:24] 2026-01-14 08:38:39,903 | INFO     | [job] retrieve thread has finished
[2026-01-14 03:39:24] 2026-01-14 08:38:39,904 | INFO     | [job] job monitor thread has finished
[2026-01-14 03:39:24] 2026-01-14 08:38:40,005 | INFO     | [payload] validate_post thread has finished
[2026-01-14 03:39:24] 2026-01-14 08:38:40,081 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 03:39:24] 2026-01-14 08:38:40,123 | INFO     | all job control threads have been joined
[2026-01-14 03:39:24] 2026-01-14 08:38:40,326 | INFO     | [payload] control thread has finished
[2026-01-14 03:39:24] 2026-01-14 08:38:40,369 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 03:39:24] 2026-01-14 08:38:40,411 | INFO     | [payload] failed_post thread has finished
[2026-01-14 03:39:24] 2026-01-14 08:38:40,541 | INFO     | [data] control thread has finished
[2026-01-14 03:39:24] 2026-01-14 08:38:40,654 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 03:39:24] 2026-01-14 08:38:40,897 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 03:39:24] 2026-01-14 08:38:40,904 | INFO     | [data] copytool_out thread has finished
[2026-01-14 03:39:24] 2026-01-14 08:38:40,973 | INFO     | [data] copytool_in thread has finished
[2026-01-14 03:39:24] 2026-01-14 08:38:41,129 | INFO     | [job] control thread has finished
[2026-01-14 03:39:24] 2026-01-14 08:38:41,386 | INFO     | [job] validate thread has finished
[2026-01-14 03:39:24] 2026-01-14 08:38:41,814 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 03:39:24] 2026-01-14 08:38:42,820 | INFO     | [job] queue monitor thread has finished
[2026-01-14 03:39:24] 2026-01-14 08:38:43,164 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 03:39:24] 2026-01-14 08:39:08,529 | INFO     | PID=4497 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-14 03:39:24] 2026-01-14 08:39:08,529 | INFO     | .. there are 3 such processes running
[2026-01-14 03:39:24] 2026-01-14 08:39:08,529 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 03:39:24] 2026-01-14 08:39:08,529 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 03:39:24] 2026-01-14 08:39:08,529 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 03:39:24] 2026-01-14 08:39:17,535 | INFO     | [monitor] cgroup control has ended
[2026-01-14 03:39:24] 2026-01-14 08:39:18,971 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140068446111552)>', '<ExcThread(monitor, started 140067699926784)>']
[2026-01-14 03:39:24] 2026-01-14 08:39:19,585 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 03:39:24] 2026-01-14 08:39:19,586 | INFO     | [monitor] control thread has ended
[2026-01-14 03:39:24] 2026-01-14 08:39:23,994 | INFO     | all workflow threads have been joined
[2026-01-14 03:39:24] 2026-01-14 08:39:23,994 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 03:39:24] 2026-01-14 08:39:23,994 | INFO     | traces error code: 0
[2026-01-14 03:39:24] 2026-01-14 08:39:23,995 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 03:39:24] 2026-01-14 08:39:24,120 [wrapper] ==== pilot stdout END ====
[2026-01-14 03:39:24] 2026-01-14 08:39:24,122 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 03:39:24] 2026-01-14 08:39:24,124 [wrapper] pilotpid: 4497
[2026-01-14 03:39:24] 2026-01-14 08:39:24,126 [wrapper] Pilot exit status: 0
[2026-01-14 03:39:24] 2026-01-14 08:39:24,136 [wrapper] pandaids: 6969273105
[2026-01-14 03:39:24] 2026-01-14 08:39:24,164 [wrapper] cleanup supervisor_pilot 29135 4498
[2026-01-14 03:39:24] 2026-01-14 08:39:24,166 [wrapper] Test setup, not cleaning
[2026-01-14 03:39:24] 2026-01-14 08:39:24,169 [wrapper] apfmon messages muted
[2026-01-14 03:39:24] 2026-01-14 08:39:24,171 [wrapper] ==== wrapper stdout END ====
[2026-01-14 03:39:24] 2026-01-14 08:39:24,173 [wrapper] ==== wrapper stderr END ====
[2026-01-14 03:39:24]  *** Error codes and diagnostics ***
[2026-01-14 03:39:24]     "exeErrorCode": 0,
[2026-01-14 03:39:24]     "exeErrorDiag": "",
[2026-01-14 03:39:24]     "pilotErrorCode": 0,
[2026-01-14 03:39:24]     "pilotErrorDiag": "",
[2026-01-14 03:39:24]  *** Listing of results directory ***
[2026-01-14 03:39:24] total 735280
[2026-01-14 03:39:24] -rw-r--r-- 1 boincer umatlas    579449 Jan 13 18:46 pilot3.tar.gz
[2026-01-14 03:39:24] -rwx------ 1 boincer umatlas     36322 Jan 13 18:46 runpilot2-wrapper.sh
[2026-01-14 03:39:24] -rw-r--r-- 1 boincer umatlas      5112 Jan 13 18:46 queuedata.json
[2026-01-14 03:39:24] -rw-r--r-- 1 boincer umatlas       100 Jan 14 01:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 03:39:24] -rwxr-xr-x 1 boincer umatlas      7986 Jan 14 01:45 run_atlas
[2026-01-14 03:39:24] -rw-r--r-- 1 boincer umatlas       105 Jan 14 01:45 job.xml
[2026-01-14 03:39:24] -rw-r--r-- 2 boincer umatlas 594980897 Jan 14 01:45 EVNT.32794306._000298.pool.root.1
[2026-01-14 03:39:24] -rw-r--r-- 2 boincer umatlas     15847 Jan 14 01:45 start_atlas.sh
[2026-01-14 03:39:24] drwxrwx--x 2 boincer umatlas      4096 Jan 14 01:45 shared
[2026-01-14 03:39:24] -rw-r--r-- 2 boincer umatlas    592382 Jan 14 01:45 input.tar.gz
[2026-01-14 03:39:24] -rw-r--r-- 1 boincer umatlas         0 Jan 14 01:45 boinc_lockfile
[2026-01-14 03:39:24] -rw-r--r-- 1 boincer umatlas      2505 Jan 14 01:45 pandaJob.out
[2026-01-14 03:39:24] -rw------- 1 boincer umatlas        57 Jan 14 01:45 setup.sh.local
[2026-01-14 03:39:24] -rw------- 1 boincer umatlas    997218 Jan 14 01:46 agis_schedconf.cvmfs.json
[2026-01-14 03:39:24] -rw------- 1 boincer umatlas   1516246 Jan 14 01:46 agis_ddmendpoints.agis.ALL.json
[2026-01-14 03:39:24] drwx------ 5 boincer umatlas      4096 Jan 14 01:46 pilot3
[2026-01-14 03:39:24] -rw-r--r-- 1 boincer umatlas      5951 Jan 14 03:28 init_data.xml
[2026-01-14 03:39:24] -rw------- 1 boincer umatlas 151388353 Jan 14 03:38 HITS.48215263._007431.pool.root.1
[2026-01-14 03:39:24] -rw-r--r-- 1 boincer umatlas       531 Jan 14 03:38 boinc_task_state.xml
[2026-01-14 03:39:24] -rw------- 1 boincer umatlas        95 Jan 14 03:38 pilot_heartbeat.json
[2026-01-14 03:39:24] -rw------- 1 boincer umatlas      1055 Jan 14 03:38 memory_monitor_summary.json
[2026-01-14 03:39:24] -rw------- 1 boincer umatlas    348244 Jan 14 03:38 log.48215263._007431.job.log.tgz.1
[2026-01-14 03:39:24] -rw------- 1 boincer umatlas      7844 Jan 14 03:38 heartbeat.json
[2026-01-14 03:39:24] -rw-r--r-- 1 boincer umatlas      8192 Jan 14 03:38 boinc_mmap_file
[2026-01-14 03:39:24] -rw-r--r-- 1 boincer umatlas        27 Jan 14 03:38 wrapper_checkpoint.txt
[2026-01-14 03:39:24] -rw------- 1 boincer umatlas      4820 Jan 14 03:39 pilotlog.txt
[2026-01-14 03:39:24] -rw------- 1 boincer umatlas    966050 Jan 14 03:39 log.48215263._007431.job.log.1
[2026-01-14 03:39:24] -rw------- 1 boincer umatlas       357 Jan 14 03:39 output.list
[2026-01-14 03:39:24] -rw-r--r-- 1 boincer umatlas       620 Jan 14 03:39 runtime_log
[2026-01-14 03:39:24] -rw------- 1 boincer umatlas   1331200 Jan 14 03:39 result.tar.gz
[2026-01-14 03:39:24] -rw-r--r-- 1 boincer umatlas      9342 Jan 14 03:39 runtime_log.err
[2026-01-14 03:39:24] -rw------- 1 boincer umatlas       658 Jan 14 03:39 jDuLDmKH3z8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmW2iKDmCn0qkn.diag
[2026-01-14 03:39:24] -rw-r--r-- 1 boincer umatlas     21019 Jan 14 03:39 stderr.txt
[2026-01-14 03:39:24] HITS file was successfully produced:
[2026-01-14 03:39:24] -rw------- 1 boincer umatlas 151388353 Jan 14 03:38 shared/HITS.pool.root.1
[2026-01-14 03:39:24]  *** Contents of shared directory: ***
[2026-01-14 03:39:24] total 730788
[2026-01-14 03:39:24] -rw-r--r-- 2 boincer umatlas 594980897 Jan 14 01:45 ATLAS.root_0
[2026-01-14 03:39:24] -rw-r--r-- 2 boincer umatlas     15847 Jan 14 01:45 start_atlas.sh
[2026-01-14 03:39:24] -rw-r--r-- 2 boincer umatlas    592382 Jan 14 01:45 input.tar.gz
[2026-01-14 03:39:24] -rw------- 1 boincer umatlas 151388353 Jan 14 03:38 HITS.pool.root.1
[2026-01-14 03:39:24] -rw------- 1 boincer umatlas   1331200 Jan 14 03:39 result.tar.gz
03:39:25 (579): run_atlas exited; CPU time 50039.925497
03:39:25 (579): called boinc_finish(0)

</stderr_txt>
]]>

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