Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:38:08 (3462176): wrapper (7.7.26015): starting
07:38:08 (3462176): wrapper: running run_atlas (--nthreads 4)
[2026-02-04 07:38:08] Arguments: --nthreads 4
[2026-02-04 07:38:08] Threads: 4
[2026-02-04 07:38:08] Checking for CVMFS
[2026-02-04 07:38:08] No cvmfs_config command found, will try listing directly
[2026-02-04 07:38:08] CVMFS is ok
[2026-02-04 07:38:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-04 07:38:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-04 07:38:08] Further information can be found at the LHC@home message board.
[2026-02-04 07:38:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 07:38:08] Checking for apptainer binary...
[2026-02-04 07:38:08] which: no apptainer in ((null))
[2026-02-04 07:38:08] apptainer is not installed, using version from CVMFS
[2026-02-04 07:38:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 07:38:08] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2026-02-04 07:38:08] apptainer works
[2026-02-04 07:38:08] Set ATHENA_PROC_NUMBER=4
[2026-02-04 07:38:08] Set ATHENA_CORE_NUMBER=4
[2026-02-04 07:38:08] Starting ATLAS job with PandaID=6969273115
[2026-02-04 07:38:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 09:49:35]  *** The last 200 lines of the pilot log: ***
[2026-02-04 09:49:35] 2026-02-04 08:35:31,200 | INFO     | time since job start (7029s) is within the limit (349056.0s)
[2026-02-04 09:49:35] 2026-02-04 08:35:31,783 | INFO     | monitor loop #482: job 0:6969273115 is in state 'finished'
[2026-02-04 09:49:35] 2026-02-04 08:35:31,783 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-04 09:49:35] 2026-02-04 08:35:33,121 | INFO     | PID=3466187 has CPU usage=16.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-04 09:49:35] 2026-02-04 08:35:33,122 | INFO     | .. there are 20 such processes running
[2026-02-04 09:49:35] 2026-02-04 08:35:34,123 | INFO     | time since job start (7032s) is within the limit (349056.0s)
[2026-02-04 09:49:35] 2026-02-04 08:35:34,286 | INFO     | monitor loop #483: job 0:6969273115 is in state 'finished'
[2026-02-04 09:49:35] 2026-02-04 08:35:34,287 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-04 09:49:35] 2026-02-04 08:35:34,305 | INFO     | CPU arch script returned: x86-64-v3
[2026-02-04 09:49:35] 2026-02-04 08:35:34,326 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2722.2050546875003
[2026-02-04 09:49:35] 2026-02-04 08:35:34,350 | INFO     | using path: /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6969273115/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 09:49:35] 2026-02-04 08:35:34,350 | INFO     | extracted standard info from prmon json
[2026-02-04 09:49:35] 2026-02-04 08:35:34,350 | INFO     | extracted standard memory fields from prmon json
[2026-02-04 09:49:35] 2026-02-04 08:35:34,351 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-04 09:49:35] 2026-02-04 08:35:34,351 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-04 09:49:35] 2026-02-04 08:35:34,351 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 09:49:35] 2026-02-04 08:35:34,353 | INFO     | fitting pss+swap vs Time
[2026-02-04 09:49:35] 2026-02-04 08:35:34,354 | INFO     | sum of square deviations: 471562330.0
[2026-02-04 09:49:35] 2026-02-04 08:35:34,354 | INFO     | sum of deviations: 15162898466.0
[2026-02-04 09:49:35] 2026-02-04 08:35:34,354 | INFO     | mean x: 1770190612.0
[2026-02-04 09:49:35] 2026-02-04 08:35:34,355 | INFO     | mean y: 2320806.486956522
[2026-02-04 09:49:35] 2026-02-04 08:35:34,355 | INFO     | intersect: -56917451634.24724
[2026-02-04 09:49:35] 2026-02-04 08:35:34,355 | INFO     | chi2: 1.3473994118967845
[2026-02-04 09:49:35] 2026-02-04 08:35:34,355 | INFO     | sum of square deviations: 412686807.5
[2026-02-04 09:49:35] 2026-02-04 08:35:34,356 | INFO     | sum of deviations: 14263287942.499998
[2026-02-04 09:49:35] 2026-02-04 08:35:34,356 | INFO     | mean x: 1770190459.5
[2026-02-04 09:49:35] 2026-02-04 08:35:34,356 | INFO     | mean y: 2318495.790909091
[2026-02-04 09:49:35] 2026-02-04 08:35:34,356 | INFO     | intersect: -61179032053.95953
[2026-02-04 09:49:35] 2026-02-04 08:35:34,356 | INFO     | chi2: 1.3489443003823
[2026-02-04 09:49:35] 2026-02-04 08:35:34,356 | INFO     | current chi2=1.3489443003823 (change=-0.11465705505547141 %)
[2026-02-04 09:49:35] 2026-02-04 08:35:34,356 | INFO     | right removable region: 109
[2026-02-04 09:49:35] 2026-02-04 08:35:34,357 | INFO     | sum of square deviations: 412686807.5
[2026-02-04 09:49:35] 2026-02-04 08:35:34,357 | INFO     | sum of deviations: 195080836.5
[2026-02-04 09:49:35] 2026-02-04 08:35:34,357 | INFO     | mean x: 1770190764.5
[2026-02-04 09:49:35] 2026-02-04 08:35:34,357 | INFO     | mean y: 2358750.1
[2026-02-04 09:49:35] 2026-02-04 08:35:34,357 | INFO     | intersect: -834426649.4508071
[2026-02-04 09:49:35] 2026-02-04 08:35:34,358 | INFO     | chi2: 0.0014336751086769415
[2026-02-04 09:49:35] 2026-02-04 08:35:34,358 | INFO     | current chi2=0.0014336751086769415 (change=99.89359687290803 %)
[2026-02-04 09:49:35] 2026-02-04 08:35:34,358 | INFO     | sum of square deviations: 358927660.0
[2026-02-04 09:49:35] 2026-02-04 08:35:34,358 | INFO     | sum of deviations: -45337335.00000012
[2026-02-04 09:49:35] 2026-02-04 08:35:34,359 | INFO     | mean x: 1770190917.0
[2026-02-04 09:49:35] 2026-02-04 08:35:34,359 | INFO     | mean y: 2359421.6666666665
[2026-02-04 09:49:35] 2026-02-04 08:35:34,359 | INFO     | intersect: 225958067.1931396
[2026-02-04 09:49:35] 2026-02-04 08:35:34,359 | INFO     | chi2: 0.0011774115881212
[2026-02-04 09:49:35] 2026-02-04 08:35:34,359 | INFO     | current chi2=0.0011774115881212 (change=17.87458811307904 %)
[2026-02-04 09:49:35] 2026-02-04 08:35:34,359 | INFO     | left removable region: 20
[2026-02-04 09:49:35] 2026-02-04 08:35:34,359 | INFO     | sum of square deviations: 218571540.0
[2026-02-04 09:49:35] 2026-02-04 08:35:34,360 | INFO     | sum of deviations: -51846705.999999985
[2026-02-04 09:49:35] 2026-02-04 08:35:34,360 | INFO     | mean x: 1770191039.0
[2026-02-04 09:49:35] 2026-02-04 08:35:34,360 | INFO     | mean y: 2358091.6853932585
[2026-02-04 09:49:35] 2026-02-04 08:35:34,360 | INFO     | intersect: 422259851.827027
[2026-02-04 09:49:35] 2026-02-04 08:35:34,361 | INFO     | chi2: 0.000339474612563823
[2026-02-04 09:49:35] 2026-02-04 08:35:34,361 | INFO     | current memory leak: -0.24 B/s (using 89 data points, chi2=0.00)
[2026-02-04 09:49:35] 2026-02-04 08:35:34,361 | INFO     | could have reported an average CPU frequency of 2706 MHz (7 samples)
[2026-02-04 09:49:35] 2026-02-04 08:35:34,361 | INFO     | ..............................
[2026-02-04 09:49:35] 2026-02-04 08:35:34,361 | INFO     | . Timing measurements:
[2026-02-04 09:49:35] 2026-02-04 08:35:34,361 | INFO     | . get job = 0 s
[2026-02-04 09:49:35] 2026-02-04 08:35:34,361 | INFO     | . initial setup = 1 s
[2026-02-04 09:49:35] 2026-02-04 08:35:34,362 | INFO     | . payload setup = 8 s
[2026-02-04 09:49:35] 2026-02-04 08:35:34,362 | INFO     | . stage-in = 0 s
[2026-02-04 09:49:35] 2026-02-04 08:35:34,362 | INFO     | . payload execution = 6987 s
[2026-02-04 09:49:35] 2026-02-04 08:35:34,362 | INFO     | . stage-out = 0 s
[2026-02-04 09:49:35] 2026-02-04 08:35:34,362 | INFO     | . log creation = 0 s
[2026-02-04 09:49:35] 2026-02-04 08:35:34,362 | INFO     | ..............................
[2026-02-04 09:49:35] 2026-02-04 08:35:34,429 | INFO     | 
[2026-02-04 09:49:35] 2026-02-04 08:35:34,429 | INFO     | job summary report
[2026-02-04 09:49:35] 2026-02-04 08:35:34,429 | INFO     | --------------------------------------------------
[2026-02-04 09:49:35] 2026-02-04 08:35:34,429 | INFO     | PanDA job id: 6969273115
[2026-02-04 09:49:35] 2026-02-04 08:35:34,429 | INFO     | task id: 48215263
[2026-02-04 09:49:35] 2026-02-04 08:35:34,429 | INFO     | errors: (none)
[2026-02-04 09:49:35] 2026-02-04 08:35:34,429 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 09:49:35] 2026-02-04 08:35:34,429 | INFO     | pilot state: finished 
[2026-02-04 09:49:35] 2026-02-04 08:35:34,429 | INFO     | transexitcode: 0
[2026-02-04 09:49:35] 2026-02-04 08:35:34,429 | INFO     | exeerrorcode: 0
[2026-02-04 09:49:35] 2026-02-04 08:35:34,429 | INFO     | exeerrordiag: 
[2026-02-04 09:49:35] 2026-02-04 08:35:34,429 | INFO     | exitcode: 0
[2026-02-04 09:49:35] 2026-02-04 08:35:34,429 | INFO     | exitmsg: OK
[2026-02-04 09:49:35] 2026-02-04 08:35:34,429 | INFO     | cpuconsumptiontime: 26321 s
[2026-02-04 09:49:35] 2026-02-04 08:35:34,430 | INFO     | nevents: 400
[2026-02-04 09:49:35] 2026-02-04 08:35:34,430 | INFO     | neventsw: 0
[2026-02-04 09:49:35] 2026-02-04 08:35:34,430 | INFO     | pid: 3473576
[2026-02-04 09:49:35] 2026-02-04 08:35:34,430 | INFO     | pgrp: 3473576
[2026-02-04 09:49:35] 2026-02-04 08:35:34,430 | INFO     | corecount: 4
[2026-02-04 09:49:35] 2026-02-04 08:35:34,430 | INFO     | event service: False
[2026-02-04 09:49:35] 2026-02-04 08:35:34,430 | INFO     | sizes: {0: 2277987, 7: 2278249, 11: 2278277, 7000: 2305834, 7001: 2314854, 7004: 2314938, 7015: 2315260}
[2026-02-04 09:49:35] 2026-02-04 08:35:34,430 | INFO     | --------------------------------------------------
[2026-02-04 09:49:35] 2026-02-04 08:35:34,430 | INFO     | 
[2026-02-04 09:49:35] 2026-02-04 08:35:34,430 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2026-02-04 09:49:35] 2026-02-04 08:35:34,454 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 09:49:35] 2026-02-04 08:35:34,454 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 09:49:35] 2026-02-04 08:35:34,454 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 09:49:35] 2026-02-04 08:35:34,454 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 09:49:35] 2026-02-04 08:35:34,454 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 09:49:35] 2026-02-04 08:35:34,455 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 09:49:35] 2026-02-04 08:35:34,455 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 09:49:35] 2026-02-04 08:35:34,455 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 09:49:35] 2026-02-04 08:35:34,455 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 09:49:35] 2026-02-04 08:35:34,455 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 09:49:35] 2026-02-04 08:35:34,455 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 09:49:35] 2026-02-04 08:35:34,455 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 09:49:35] 2026-02-04 08:35:34,455 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 09:49:35] 2026-02-04 08:35:34,455 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 09:49:35] 2026-02-04 08:35:34,455 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 09:49:35] 2026-02-04 08:35:34,455 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 09:49:35] 2026-02-04 08:35:34,455 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 09:49:35] 2026-02-04 08:35:34,455 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 09:49:35] 2026-02-04 08:35:34,455 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 09:49:35] 2026-02-04 08:35:34,455 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 09:49:35] 2026-02-04 08:35:34,455 | INFO     | job 6969273115 has completed (purged errors)
[2026-02-04 09:49:35] 2026-02-04 08:35:34,456 | INFO     | overall cleanup function is called
[2026-02-04 09:49:35] 2026-02-04 08:35:35,463 | INFO     | --- collectZombieJob: --- 10, [3473576]
[2026-02-04 09:49:35] 2026-02-04 08:35:35,464 | INFO     | zombie collector waiting for pid 3473576
[2026-02-04 09:49:35] 2026-02-04 08:35:35,464 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 09:49:35] 2026-02-04 08:35:35,464 | INFO     | collected zombie processes
[2026-02-04 09:49:35] 2026-02-04 08:35:35,464 | INFO     | will attempt to kill all subprocesses of pid=3473576
[2026-02-04 09:49:35] 2026-02-04 08:35:36,250 | INFO     | process IDs to be killed: [3473576] (in reverse order)
[2026-02-04 09:49:35] 2026-02-04 08:35:36,532 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 09:49:35] 2026-02-04 08:35:36,533 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 09:49:35] 2026-02-04 08:35:36,562 | INFO     | did not find any defunct processes belonging to 3473576
[2026-02-04 09:49:35] 2026-02-04 08:35:36,590 | INFO     | did not find any defunct processes belonging to 3473576
[2026-02-04 09:49:35] 2026-02-04 08:35:36,591 | INFO     | ready for new job
[2026-02-04 09:49:35] 2026-02-04 08:35:36,591 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 09:49:35] 2026-02-04 08:35:36,594 | INFO     | ***************************************
[2026-02-04 09:49:35] 2026-02-04 08:35:36,594 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-02-04 09:49:35] 2026-02-04 08:35:36,594 | INFO     | ***************************************
[2026-02-04 09:49:35] 2026-02-04 08:35:36,594 | INFO     | 
[2026-02-04 09:49:35] 2026-02-04 08:35:36,603 | INFO     | architecture information:
[2026-02-04 09:49:35] 2026-02-04 08:35:36,604 | INFO     | executing command: cat /etc/os-release
[2026-02-04 09:49:35] 2026-02-04 08:35:36,633 | INFO     | cat /etc/os-release:
[2026-02-04 09:49:35] NAME="CentOS Linux"
[2026-02-04 09:49:35] VERSION="7 (Core)"
[2026-02-04 09:49:35] ID="centos"
[2026-02-04 09:49:35] ID_LIKE="rhel fedora"
[2026-02-04 09:49:35] VERSION_ID="7"
[2026-02-04 09:49:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 09:49:35] ANSI_COLOR="0;31"
[2026-02-04 09:49:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 09:49:35] HOME_URL="https://www.centos.org/"
[2026-02-04 09:49:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 09:49:35] 
[2026-02-04 09:49:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 09:49:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 09:49:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 09:49:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 09:49:35] 
[2026-02-04 09:49:35] 2026-02-04 08:35:36,633 | INFO     | ***************************************
[2026-02-04 09:49:35] 2026-02-04 08:35:37,136 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2026-02-04 09:49:35] 2026-02-04 08:35:37,164 | INFO     | sufficient remaining disk space (3200241369088 B)
[2026-02-04 09:49:35] 2026-02-04 08:35:37,165 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 09:49:35] 2026-02-04 08:35:37,165 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 09:49:35] 2026-02-04 08:35:37,165 | INFO     | update_server=False
[2026-02-04 09:49:35] 2026-02-04 08:35:37,165 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 09:49:35] 2026-02-04 08:35:37,165 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 09:49:35] 2026-02-04 08:35:37,795 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 09:49:35] 2026-02-04 08:35:37,795 | INFO     | aborting loop
[2026-02-04 09:49:35] 2026-02-04 08:35:37,848 | INFO     | all job control threads have been joined
[2026-02-04 09:49:35] 2026-02-04 08:35:37,859 | INFO     | all data control threads have been joined
[2026-02-04 09:49:35] 2026-02-04 08:35:38,170 | INFO     | [job] retrieve thread has finished
[2026-02-04 09:49:35] 2026-02-04 08:35:38,271 | INFO     | [job] validate thread has finished
[2026-02-04 09:49:35] 2026-02-04 08:35:38,285 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 09:49:35] 2026-02-04 08:35:38,290 | INFO     | all payload control threads have been joined
[2026-02-04 09:49:35] 2026-02-04 08:35:38,457 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 09:49:35] 2026-02-04 08:35:38,693 | INFO     | [payload] validate_post thread has finished
[2026-02-04 09:49:35] 2026-02-04 08:35:38,724 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 09:49:35] 2026-02-04 08:35:38,800 | INFO     | [job] job monitor thread has finished
[2026-02-04 09:49:35] 2026-02-04 08:35:38,854 | INFO     | [job] control thread has finished
[2026-02-04 09:49:35] 2026-02-04 08:35:38,861 | INFO     | [data] control thread has finished
[2026-02-04 09:49:35] 2026-02-04 08:35:39,172 | INFO     | [data] copytool_out thread has finished
[2026-02-04 09:49:35] 2026-02-04 08:35:39,268 | INFO     | [data] copytool_in thread has finished
[2026-02-04 09:49:35] 2026-02-04 08:35:39,295 | INFO     | [payload] control thread has finished
[2026-02-04 09:49:35] 2026-02-04 08:35:39,439 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 09:49:35] 2026-02-04 08:35:39,576 | INFO     | [payload] failed_post thread has finished
[2026-02-04 09:49:35] 2026-02-04 08:35:39,671 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 09:49:35] 2026-02-04 08:35:40,445 | INFO     | [job] queue monitor thread has finished
[2026-02-04 09:49:35] 2026-02-04 08:35:42,731 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 09:49:35] 2026-02-04 08:35:47,391 | INFO     | job.realtimelogging is not enabled
[2026-02-04 09:49:35] 2026-02-04 08:35:48,395 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 09:49:35] 2026-02-04 08:36:08,089 | INFO     | PID=3466187 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-04 09:49:35] 2026-02-04 08:36:08,090 | INFO     | .. there are 20 such processes running
[2026-02-04 09:49:35] 2026-02-04 08:36:08,093 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 09:49:35] 2026-02-04 08:36:08,093 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 09:49:35] 2026-02-04 08:36:08,093 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 09:49:35] 2026-02-04 08:36:33,599 | INFO     | [monitor] cgroup control has ended
[2026-02-04 09:49:35] 2026-02-04 08:36:35,310 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22875377596224)>', '<ExcThread(monitor, started 22875138389760)>']
[2026-02-04 09:49:35] 2026-02-04 08:36:36,234 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 09:49:35] 2026-02-04 08:36:36,235 | INFO     | [monitor] control thread has ended
[2026-02-04 09:49:35] 2026-02-04 08:36:40,335 | INFO     | all workflow threads have been joined
[2026-02-04 09:49:35] 2026-02-04 08:36:40,336 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 09:49:35] 2026-02-04 08:36:40,336 | INFO     | traces error code: 0
[2026-02-04 09:49:35] 2026-02-04 08:36:40,336 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 09:49:35] 2026-02-04 08:36:40,488 [wrapper] ==== pilot stdout END ====
[2026-02-04 09:49:35] 2026-02-04 08:36:40,492 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 09:49:35] 2026-02-04 08:36:40,496 [wrapper] pilotpid: 3466187
[2026-02-04 09:49:35] 2026-02-04 08:36:40,500 [wrapper] Pilot exit status: 0
[2026-02-04 09:49:35] 2026-02-04 08:36:40,518 [wrapper] pandaids: 6969273115
[2026-02-04 09:49:35] 2026-02-04 08:36:40,689 [wrapper] cleanup supervisor_pilot 3624854 3466188
[2026-02-04 09:49:35] 2026-02-04 08:36:40,694 [wrapper] Test setup, not cleaning
[2026-02-04 09:49:35] 2026-02-04 08:36:40,698 [wrapper] apfmon messages muted
[2026-02-04 09:49:35] 2026-02-04 08:36:40,701 [wrapper] ==== wrapper stdout END ====
[2026-02-04 09:49:35] 2026-02-04 08:36:40,705 [wrapper] ==== wrapper stderr END ====
[2026-02-04 09:49:35]  *** Error codes and diagnostics ***
[2026-02-04 09:49:35]     "exeErrorCode": 0,
[2026-02-04 09:49:35]     "exeErrorDiag": "",
[2026-02-04 09:49:35]     "pilotErrorCode": 0,
[2026-02-04 09:49:35]     "pilotErrorDiag": "",
[2026-02-04 09:49:35]  *** Listing of results directory ***
[2026-02-04 09:49:35] total 3944676
[2026-02-04 09:49:35] -rw-r--r-- 1 boinc boinc    579449 Jan 14 00:46 pilot3.tar.gz
[2026-02-04 09:49:35] -rwx------ 1 boinc boinc     36322 Jan 14 00:46 runpilot2-wrapper.sh
[2026-02-04 09:49:35] -rw-r--r-- 1 boinc boinc      5112 Jan 14 00:46 queuedata.json
[2026-02-04 09:49:35] -rw-r--r-- 1 boinc boinc       100 Jan 20 20:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 09:49:35] -rwxr-xr-x 1 boinc boinc      7986 Jan 20 20:28 run_atlas
[2026-02-04 09:49:35] -rw-r--r-- 1 boinc boinc       105 Jan 20 20:28 job.xml
[2026-02-04 09:49:35] -rw------- 2 boinc boinc  64356352 Jan 20 20:44 copy_DGLD8P
[2026-02-04 09:49:35] -rw------- 2 boinc boinc  21299200 Jan 23 14:59 copy_kqctlg
[2026-02-04 09:49:35] -rw------- 2 boinc boinc 116654080 Jan 23 16:15 copy_eiXOjE
[2026-02-04 09:49:35] -rw------- 2 boinc boinc   5439488 Jan 23 17:31 copy_ZV0gL3
[2026-02-04 09:49:35] -rw------- 2 boinc boinc 408879104 Jan 23 19:27 copy_86k7dO
[2026-02-04 09:49:35] -rw------- 2 boinc boinc  12582912 Jan 25 01:57 copy_kPvWtG
[2026-02-04 09:49:35] -rw------- 2 boinc boinc  58785792 Jan 26 11:07 copy_2xJITD
[2026-02-04 09:49:35] -rw------- 2 boinc boinc 427032576 Jan 26 18:35 copy_5Yje6k
[2026-02-04 09:49:35] -rw------- 2 boinc boinc 252444672 Jan 29 02:21 copy_VfjMCo
[2026-02-04 09:49:35] -rw------- 2 boinc boinc 312672256 Jan 30 09:53 copy_WwrnqM
[2026-02-04 09:49:35] -rw------- 2 boinc boinc 231997440 Jan 31 15:54 copy_sO1Qtg
[2026-02-04 09:49:35] -rw------- 2 boinc boinc 510001152 Jan 31 18:40 copy_6cudWO
[2026-02-04 09:49:35] -rw------- 2 boinc boinc 377290752 Jan 31 20:48 copy_meP62h
[2026-02-04 09:49:35] -rw------- 2 boinc boinc 118358016 Jan 31 21:58 copy_Ejvwlj
[2026-02-04 09:49:35] -rw------- 2 boinc boinc   5963776 Feb  2 01:22 copy_UwfeQi
[2026-02-04 09:49:35] -rw------- 2 boinc boinc 356188160 Feb  2 05:13 copy_9AcIDO
[2026-02-04 09:49:35] -rw-r--r-- 1 boinc boinc      6687 Feb  4 07:38 init_data.xml
[2026-02-04 09:49:35] -rw-r--r-- 2 boinc boinc 594980897 Feb  4 07:38 EVNT.32794306._000298.pool.root.1
[2026-02-04 09:49:35] -rw-r--r-- 2 boinc boinc     15847 Feb  4 07:38 start_atlas.sh
[2026-02-04 09:49:35] drwxrwx--x 2 boinc boinc      4096 Feb  4 07:38 shared
[2026-02-04 09:49:35] -rw-r--r-- 2 boinc boinc    592384 Feb  4 07:38 input.tar.gz
[2026-02-04 09:49:35] -rw-r--r-- 1 boinc boinc         0 Feb  4 07:38 boinc_lockfile
[2026-02-04 09:49:35] -rw-r--r-- 1 boinc boinc      2505 Feb  4 07:38 pandaJob.out
[2026-02-04 09:49:35] -rw------- 1 boinc boinc   1009228 Feb  4 07:38 agis_schedconf.cvmfs.json
[2026-02-04 09:49:35] -rw------- 1 boinc boinc   1511668 Feb  4 07:38 agis_ddmendpoints.agis.ALL.json
[2026-02-04 09:49:35] drwx------ 5 boinc boinc      4096 Feb  4 07:38 pilot3
[2026-02-04 09:49:35] -rw------- 1 boinc boinc 157824872 Feb  4 09:34 HITS.48215263._007441.pool.root.1
[2026-02-04 09:49:35] -rw-r--r-- 1 boinc boinc       530 Feb  4 09:34 boinc_task_state.xml
[2026-02-04 09:49:35] -rw------- 1 boinc boinc      1028 Feb  4 09:35 memory_monitor_summary.json
[2026-02-04 09:49:35] -rw------- 1 boinc boinc    303727 Feb  4 09:35 log.48215263._007441.job.log.tgz.1
[2026-02-04 09:49:35] -rw------- 1 boinc boinc      7774 Feb  4 09:35 heartbeat.json
[2026-02-04 09:49:35] -rw------- 1 boinc boinc        95 Feb  4 09:36 pilot_heartbeat.json
[2026-02-04 09:49:35] -rw------- 1 boinc boinc      4907 Feb  4 09:36 pilotlog.txt
[2026-02-04 09:49:35] -rw------- 1 boinc boinc    997580 Feb  4 09:36 log.48215263._007441.job.log.1
[2026-02-04 09:49:35] -rw------- 1 boinc boinc       357 Feb  4 09:36 output.list
[2026-02-04 09:49:35] -rw-r--r-- 1 boinc boinc       620 Feb  4 09:36 runtime_log
[2026-02-04 09:49:35] -rw------- 1 boinc boinc   1320960 Feb  4 09:36 result.tar.gz
[2026-02-04 09:49:35] -rw-r--r-- 1 boinc boinc      9205 Feb  4 09:36 runtime_log.err
[2026-02-04 09:49:35] -rw------- 1 boinc boinc       663 Feb  4 09:36 bEIMDmKH3z8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmb2iKDm3sVb8n.diag
[2026-02-04 09:49:35] -rw-r--r-- 1 boinc boinc        27 Feb  4 09:49 wrapper_checkpoint.txt
[2026-02-04 09:49:35] -rw-r--r-- 1 boinc boinc      8192 Feb  4 09:49 boinc_mmap_file
[2026-02-04 09:49:35] -rw-r--r-- 1 boinc boinc     21135 Feb  4 09:49 stderr.txt
[2026-02-04 09:49:35] HITS file was successfully produced:
[2026-02-04 09:49:35] -rw------- 1 boinc boinc 157824872 Feb  4 09:34 shared/HITS.pool.root.1
[2026-02-04 09:49:35]  *** Contents of shared directory: ***
[2026-02-04 09:49:35] total 3940192
[2026-02-04 09:49:35] -rw------- 2 boinc boinc  64356352 Jan 20 20:44 copy_DGLD8P
[2026-02-04 09:49:35] -rw------- 2 boinc boinc  21299200 Jan 23 14:59 copy_kqctlg
[2026-02-04 09:49:35] -rw------- 2 boinc boinc 116654080 Jan 23 16:15 copy_eiXOjE
[2026-02-04 09:49:35] -rw------- 2 boinc boinc   5439488 Jan 23 17:31 copy_ZV0gL3
[2026-02-04 09:49:35] -rw------- 2 boinc boinc 408879104 Jan 23 19:27 copy_86k7dO
[2026-02-04 09:49:35] -rw------- 2 boinc boinc  12582912 Jan 25 01:57 copy_kPvWtG
[2026-02-04 09:49:35] -rw------- 2 boinc boinc  58785792 Jan 26 11:07 copy_2xJITD
[2026-02-04 09:49:35] -rw------- 2 boinc boinc 427032576 Jan 26 18:35 copy_5Yje6k
[2026-02-04 09:49:35] -rw------- 2 boinc boinc 252444672 Jan 29 02:21 copy_VfjMCo
[2026-02-04 09:49:35] -rw------- 2 boinc boinc 312672256 Jan 30 09:53 copy_WwrnqM
[2026-02-04 09:49:35] -rw------- 2 boinc boinc 231997440 Jan 31 15:54 copy_sO1Qtg
[2026-02-04 09:49:35] -rw------- 2 boinc boinc 510001152 Jan 31 18:40 copy_6cudWO
[2026-02-04 09:49:35] -rw------- 2 boinc boinc 377290752 Jan 31 20:48 copy_meP62h
[2026-02-04 09:49:35] -rw------- 2 boinc boinc 118358016 Jan 31 21:58 copy_Ejvwlj
[2026-02-04 09:49:35] -rw------- 2 boinc boinc   5963776 Feb  2 01:22 copy_UwfeQi
[2026-02-04 09:49:35] -rw------- 2 boinc boinc 356188160 Feb  2 05:13 copy_9AcIDO
[2026-02-04 09:49:35] -rw-r--r-- 2 boinc boinc 594980897 Feb  4 07:38 ATLAS.root_0
[2026-02-04 09:49:35] -rw-r--r-- 2 boinc boinc     15847 Feb  4 07:38 start_atlas.sh
[2026-02-04 09:49:35] -rw-r--r-- 2 boinc boinc    592384 Feb  4 07:38 input.tar.gz
[2026-02-04 09:49:35] -rw------- 1 boinc boinc 157824872 Feb  4 09:34 HITS.pool.root.1
[2026-02-04 09:49:35] -rw------- 1 boinc boinc   1320960 Feb  4 09:36 result.tar.gz
09:49:36 (3462176): run_atlas exited; CPU time 26666.382632
09:49:36 (3462176): called boinc_finish(0)

</stderr_txt>
]]>

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