Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:32:37 (182932): wrapper (7.7.26015): starting
11:32:37 (182932): wrapper: running run_atlas (--nthreads 2)
[2026-01-14 11:32:37] Arguments: --nthreads 2
[2026-01-14 11:32:37] Threads: 2
[2026-01-14 11:32:37] Checking for CVMFS
[2026-01-14 11:32:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 11:32:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 11:32:37] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 11:32:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 11:32:37] 2.9.2.0 4158477 736 55428 155128 1 56 27282052 36864001 0 130560 0 592831 99.990 30163 23060 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-14 11:32:37] CVMFS is ok
[2026-01-14 11:32:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 11:32:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 11:32:37] Further information can be found at the LHC@home message board.
[2026-01-14 11:32:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 11:32:37] Checking for apptainer binary...
[2026-01-14 11:32:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 11:32:37] Running /usr/bin/apptainer --version
[2026-01-14 11:32:37] apptainer version 1.4.1-1.1
[2026-01-14 11:32:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 11:32:38] magicA244
[2026-01-14 11:32:38] apptainer works
[2026-01-14 11:32:38] Set ATHENA_PROC_NUMBER=2
[2026-01-14 11:32:38] Set ATHENA_CORE_NUMBER=2
[2026-01-14 11:32:38] Starting ATLAS job with PandaID=6969271966
[2026-01-14 11:32:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 12:52:05]  *** The last 200 lines of the pilot log: ***
[2026-01-14 12:52:05] 2026-01-14 11:51:06,546 | INFO     | aborting loop
[2026-01-14 12:52:05] 2026-01-14 11:51:06,758 | INFO     | [job] queue monitor thread has finished
[2026-01-14 12:52:05] 2026-01-14 11:51:06,759 | INFO     | [job] retrieve thread has finished
[2026-01-14 12:52:05] 2026-01-14 11:51:06,864 | INFO     | [payload] control thread has finished
[2026-01-14 12:52:05] 2026-01-14 11:51:06,872 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 12:52:05] 2026-01-14 11:51:06,886 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 12:52:05] 2026-01-14 11:51:06,908 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 12:52:05] 2026-01-14 11:51:07,116 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 12:52:05] 2026-01-14 11:51:07,140 | INFO     | [data] control thread has finished
[2026-01-14 12:52:05] 2026-01-14 11:51:07,429 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 12:52:05] 2026-01-14 11:51:07,473 | INFO     | [job] control thread has finished
[2026-01-14 12:52:05] 2026-01-14 11:51:07,552 | INFO     | [job] job monitor thread has finished
[2026-01-14 12:52:05] 2026-01-14 11:51:07,654 | INFO     | [data] copytool_in thread has finished
[2026-01-14 12:52:05] 2026-01-14 11:51:07,800 | INFO     | [payload] failed_post thread has finished
[2026-01-14 12:52:05] 2026-01-14 11:51:08,245 | INFO     | [job] validate thread has finished
[2026-01-14 12:52:05] 2026-01-14 11:51:08,328 | INFO     | [payload] validate_post thread has finished
[2026-01-14 12:52:05] 2026-01-14 11:51:08,893 | INFO     | [data] copytool_out thread has finished
[2026-01-14 12:52:05] 2026-01-14 11:51:11,435 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 12:52:05] 2026-01-14 11:51:16,700 | INFO     | job.realtimelogging is not enabled
[2026-01-14 12:52:05] 2026-01-14 11:51:17,706 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 12:52:05] 2026-01-14 11:51:35,686 | INFO     | PID=186644 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-14 12:52:05] 2026-01-14 11:51:35,686 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 12:52:05] 2026-01-14 11:51:35,686 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 12:52:05] 2026-01-14 11:51:35,686 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 12:52:05] 2026-01-14 11:51:58,009 | INFO     | [monitor] cgroup control has ended
[2026-01-14 12:52:05] 2026-01-14 11:52:00,078 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140635342882624)>', '<ExcThread(monitor, started 140634409137920)>']
[2026-01-14 12:52:05] 2026-01-14 11:52:00,818 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 12:52:05] 2026-01-14 11:52:00,818 | INFO     | [monitor] control thread has ended
[2026-01-14 12:52:05] 2026-01-14 11:52:05,104 | INFO     | all workflow threads have been joined
[2026-01-14 12:52:05] 2026-01-14 11:52:05,104 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 12:52:05] 2026-01-14 11:52:05,105 | INFO     | traces error code: 0
[2026-01-14 12:52:05] 2026-01-14 11:52:05,105 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 12:52:05] 2026-01-14 11:52:05,149 [wrapper] ==== pilot stdout END ====
[2026-01-14 12:52:05] 2026-01-14 11:52:05,152 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 12:52:05] 2026-01-14 11:52:05,154 [wrapper] pilotpid: 186644
[2026-01-14 12:52:05] 2026-01-14 11:52:05,157 [wrapper] Pilot exit status: 0
[2026-01-14 12:52:05] 2026-01-14 11:52:05,163 [wrapper] pandaids: 6969271966
[2026-01-14 12:52:05] 2026-01-14 11:52:05,176 [wrapper] cleanup supervisor_pilot  205047 186645
[2026-01-14 12:52:05] 2026-01-14 11:52:05,179 [wrapper] Test setup, not cleaning
[2026-01-14 12:52:05] 2026-01-14 11:52:05,181 [wrapper] apfmon messages muted
[2026-01-14 12:52:05] 2026-01-14 11:52:05,183 [wrapper] ==== wrapper stdout END ====
[2026-01-14 12:52:05] 2026-01-14 11:52:05,185 [wrapper] ==== wrapper stderr END ====
[2026-01-14 12:52:05]  *** Error codes and diagnostics ***
[2026-01-14 12:52:05]     "exeErrorCode": 0,
[2026-01-14 12:52:05]     "exeErrorDiag": "",
[2026-01-14 12:52:05]     "pilotErrorCode": 0,
[2026-01-14 12:52:05]     "pilotErrorDiag": "",
[2026-01-14 12:52:05]  *** Listing of results directory ***
[2026-01-14 12:52:05] total 731284
[2026-01-14 12:52:05] -rwx------ 1 boinc boinc     36322 Jan 13 23:02 runpilot2-wrapper.sh
[2026-01-14 12:52:05] -rw-r--r-- 1 boinc boinc    579449 Jan 13 23:12 pilot3.tar.gz
[2026-01-14 12:52:05] -rw-r--r-- 1 boinc boinc      5112 Jan 13 23:20 queuedata.json
[2026-01-14 12:52:05] -rw-r--r-- 1 boinc boinc       100 Jan 14 11:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 12:52:05] -rwxr-xr-x 1 boinc boinc      7986 Jan 14 11:32 run_atlas
[2026-01-14 12:52:05] -rw-r--r-- 1 boinc boinc       105 Jan 14 11:32 job.xml
[2026-01-14 12:52:05] -rw-r--r-- 2 boinc boinc 598418649 Jan 14 11:32 EVNT.32794306._000278.pool.root.1
[2026-01-14 12:52:05] -rw-r--r-- 2 boinc boinc    592391 Jan 14 11:32 input.tar.gz
[2026-01-14 12:52:05] -rw-r--r-- 2 boinc boinc     15847 Jan 14 11:32 start_atlas.sh
[2026-01-14 12:52:05] drwxrwx--x 2 boinc boinc      4096 Jan 14 11:32 shared
[2026-01-14 12:52:05] -rw-r--r-- 1 boinc boinc         0 Jan 14 11:32 boinc_setup_complete
[2026-01-14 12:52:05] -rw-r--r-- 1 boinc boinc      6209 Jan 14 11:32 init_data.xml
[2026-01-14 12:52:05] -rw-r--r-- 1 boinc boinc         0 Jan 14 11:32 boinc_lockfile
[2026-01-14 12:52:05] -rw-r--r-- 1 boinc boinc      2504 Jan 14 11:32 pandaJob.out
[2026-01-14 12:52:05] -rw------- 1 boinc boinc    997226 Jan 14 11:32 agis_schedconf.cvmfs.json
[2026-01-14 12:52:05] -rw------- 1 boinc boinc   1516246 Jan 14 11:32 agis_ddmendpoints.agis.ALL.json
[2026-01-14 12:52:05] drwx------ 5 boinc boinc      4096 Jan 14 11:32 pilot3
[2026-01-14 12:52:05] -rw------- 1 boinc boinc 144641166 Jan 14 12:50 HITS.48215263._006947.pool.root.1
[2026-01-14 12:52:05] -rw-r--r-- 1 boinc boinc       529 Jan 14 12:50 boinc_task_state.xml
[2026-01-14 12:52:05] -rw------- 1 boinc boinc      1018 Jan 14 12:50 memory_monitor_summary.json
[2026-01-14 12:52:05] -rw------- 1 boinc boinc    245143 Jan 14 12:50 log.48215263._006947.job.log.tgz.1
[2026-01-14 12:52:05] -rw------- 1 boinc boinc      7755 Jan 14 12:51 heartbeat.json
[2026-01-14 12:52:05] -rw------- 1 boinc boinc        95 Jan 14 12:51 pilot_heartbeat.json
[2026-01-14 12:52:05] -rw-r--r-- 1 boinc boinc        26 Jan 14 12:52 wrapper_checkpoint.txt
[2026-01-14 12:52:05] -rw-r--r-- 1 boinc boinc      8192 Jan 14 12:52 boinc_mmap_file
[2026-01-14 12:52:05] -rw------- 1 boinc boinc      4823 Jan 14 12:52 pilotlog.txt
[2026-01-14 12:52:05] -rw------- 1 boinc boinc    691953 Jan 14 12:52 log.48215263._006947.job.log.1
[2026-01-14 12:52:05] -rw------- 1 boinc boinc       357 Jan 14 12:52 output.list
[2026-01-14 12:52:05] -rw-r--r-- 1 boinc boinc       620 Jan 14 12:52 runtime_log
[2026-01-14 12:52:05] -rw------- 1 boinc boinc    952320 Jan 14 12:52 result.tar.gz
[2026-01-14 12:52:05] -rw-r--r-- 1 boinc boinc      8912 Jan 14 12:52 runtime_log.err
[2026-01-14 12:52:05] -rw------- 1 boinc boinc       659 Jan 14 12:52 SDBODmJe1z8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmWGpKDm7sSxbn.diag
[2026-01-14 12:52:05] -rw-r--r-- 1 boinc boinc      6725 Jan 14 12:52 stderr.txt
[2026-01-14 12:52:05] HITS file was successfully produced:
[2026-01-14 12:52:05] -rw------- 1 boinc boinc 144641166 Jan 14 12:50 shared/HITS.pool.root.1
[2026-01-14 12:52:05]  *** Contents of shared directory: ***
[2026-01-14 12:52:05] total 727184
[2026-01-14 12:52:05] -rw-r--r-- 2 boinc boinc 598418649 Jan 14 11:32 ATLAS.root_0
[2026-01-14 12:52:05] -rw-r--r-- 2 boinc boinc    592391 Jan 14 11:32 input.tar.gz
[2026-01-14 12:52:05] -rw-r--r-- 2 boinc boinc     15847 Jan 14 11:32 start_atlas.sh
[2026-01-14 12:52:05] -rw------- 1 boinc boinc 144641166 Jan 14 12:50 HITS.pool.root.1
[2026-01-14 12:52:05] -rw------- 1 boinc boinc    952320 Jan 14 12:52 result.tar.gz
12:52:07 (182932): run_atlas exited; CPU time 8996.931292
12:52:07 (182932): called boinc_finish(0)

</stderr_txt>
]]>

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