Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:12:07 (158526): wrapper (7.7.26015): starting
10:12:07 (158526): wrapper: running run_atlas (--nthreads 2)
[2026-01-14 10:12:07] Arguments: --nthreads 2
[2026-01-14 10:12:07] Threads: 2
[2026-01-14 10:12:07] Checking for CVMFS
[2026-01-14 10:12:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 10:12:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 10:12:07] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 10:12:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 10:12:07] 2.9.2.0 4158477 655 55072 155124 1 57 27262922 36864001 0 130560 0 526980 99.991 24686 21447 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-14 10:12:07] CVMFS is ok
[2026-01-14 10:12:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 10:12:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 10:12:07] Further information can be found at the LHC@home message board.
[2026-01-14 10:12:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 10:12:07] Checking for apptainer binary...
[2026-01-14 10:12:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 10:12:07] Running /usr/bin/apptainer --version
[2026-01-14 10:12:07] apptainer version 1.4.1-1.1
[2026-01-14 10:12:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 10:12:07] magicA244
[2026-01-14 10:12:07] apptainer works
[2026-01-14 10:12:07] Set ATHENA_PROC_NUMBER=2
[2026-01-14 10:12:07] Set ATHENA_CORE_NUMBER=2
[2026-01-14 10:12:07] Starting ATLAS job with PandaID=6969271963
[2026-01-14 10:12:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 11:32:33]  *** The last 200 lines of the pilot log: ***
[2026-01-14 11:32:33] 2026-01-14 10:31:31,950 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 11:32:33] 2026-01-14 10:31:32,421 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 11:32:33] 2026-01-14 10:31:32,421 | INFO     | aborting loop
[2026-01-14 11:32:33] 2026-01-14 10:31:32,467 | INFO     | all data control threads have been joined
[2026-01-14 11:32:33] 2026-01-14 10:31:32,948 | INFO     | [job] retrieve thread has finished
[2026-01-14 11:32:33] 2026-01-14 10:31:32,955 | INFO     | [job] queue monitor thread has finished
[2026-01-14 11:32:33] 2026-01-14 10:31:33,075 | INFO     | all job control threads have been joined
[2026-01-14 11:32:33] 2026-01-14 10:31:33,195 | INFO     | [data] copytool_in thread has finished
[2026-01-14 11:32:33] 2026-01-14 10:31:33,427 | INFO     | [job] job monitor thread has finished
[2026-01-14 11:32:33] 2026-01-14 10:31:33,437 | INFO     | all payload control threads have been joined
[2026-01-14 11:32:33] 2026-01-14 10:31:33,472 | INFO     | [data] control thread has finished
[2026-01-14 11:32:33] 2026-01-14 10:31:33,660 | INFO     | [payload] validate_post thread has finished
[2026-01-14 11:32:33] 2026-01-14 10:31:33,955 | INFO     | [data] copytool_out thread has finished
[2026-01-14 11:32:33] 2026-01-14 10:31:34,073 | INFO     | [payload] failed_post thread has finished
[2026-01-14 11:32:33] 2026-01-14 10:31:34,081 | INFO     | [job] control thread has finished
[2026-01-14 11:32:33] 2026-01-14 10:31:34,124 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 11:32:33] 2026-01-14 10:31:34,140 | INFO     | [job] validate thread has finished
[2026-01-14 11:32:33] 2026-01-14 10:31:34,226 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 11:32:33] 2026-01-14 10:31:34,256 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 11:32:33] 2026-01-14 10:31:34,443 | INFO     | [payload] control thread has finished
[2026-01-14 11:32:33] 2026-01-14 10:31:35,955 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 11:32:33] 2026-01-14 10:31:42,074 | INFO     | job.realtimelogging is not enabled
[2026-01-14 11:32:33] 2026-01-14 10:31:43,080 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 11:32:33] 2026-01-14 10:32:27,872 | INFO     | [monitor] cgroup control has ended
[2026-01-14 11:32:33] 2026-01-14 10:32:28,120 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139662611490624)>', '<ExcThread(monitor, started 139661984913152)>']
[2026-01-14 11:32:33] 2026-01-14 10:32:28,227 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 11:32:33] 2026-01-14 10:32:28,228 | INFO     | [monitor] control thread has ended
[2026-01-14 11:32:33] 2026-01-14 10:32:33,146 | INFO     | all workflow threads have been joined
[2026-01-14 11:32:33] 2026-01-14 10:32:33,147 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 11:32:33] 2026-01-14 10:32:33,147 | INFO     | traces error code: 0
[2026-01-14 11:32:33] 2026-01-14 10:32:33,147 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 11:32:33] 2026-01-14 10:32:33,191 [wrapper] ==== pilot stdout END ====
[2026-01-14 11:32:33] 2026-01-14 10:32:33,194 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 11:32:33] 2026-01-14 10:32:33,196 [wrapper] pilotpid: 162236
[2026-01-14 11:32:33] 2026-01-14 10:32:33,198 [wrapper] Pilot exit status: 0
[2026-01-14 11:32:33] 2026-01-14 10:32:33,205 [wrapper] pandaids: 6969271963
[2026-01-14 11:32:33] 2026-01-14 10:32:33,219 [wrapper] cleanup supervisor_pilot  180354 162237
[2026-01-14 11:32:33] 2026-01-14 10:32:33,221 [wrapper] Test setup, not cleaning
[2026-01-14 11:32:33] 2026-01-14 10:32:33,223 [wrapper] apfmon messages muted
[2026-01-14 11:32:33] 2026-01-14 10:32:33,225 [wrapper] ==== wrapper stdout END ====
[2026-01-14 11:32:33] 2026-01-14 10:32:33,227 [wrapper] ==== wrapper stderr END ====
[2026-01-14 11:32:33]  *** Error codes and diagnostics ***
[2026-01-14 11:32:33]     "exeErrorCode": 0,
[2026-01-14 11:32:33]     "exeErrorDiag": "",
[2026-01-14 11:32:33]     "pilotErrorCode": 0,
[2026-01-14 11:32:33]     "pilotErrorDiag": "",
[2026-01-14 11:32:33]  *** Listing of results directory ***
[2026-01-14 11:32:33] total 735400
[2026-01-14 11:32:33] -rwx------ 1 boinc boinc     36322 Jan 13 23:02 runpilot2-wrapper.sh
[2026-01-14 11:32:33] -rw-r--r-- 1 boinc boinc    579449 Jan 13 23:12 pilot3.tar.gz
[2026-01-14 11:32:33] -rw-r--r-- 1 boinc boinc      5112 Jan 13 23:20 queuedata.json
[2026-01-14 11:32:33] -rw-r--r-- 1 boinc boinc       100 Jan 14 10:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 11:32:33] -rwxr-xr-x 1 boinc boinc      7986 Jan 14 10:12 run_atlas
[2026-01-14 11:32:33] -rw-r--r-- 1 boinc boinc       105 Jan 14 10:12 job.xml
[2026-01-14 11:32:33] -rw-r--r-- 2 boinc boinc 598418649 Jan 14 10:12 EVNT.32794306._000278.pool.root.1
[2026-01-14 11:32:33] -rw-r--r-- 2 boinc boinc    592397 Jan 14 10:12 input.tar.gz
[2026-01-14 11:32:33] -rw-r--r-- 2 boinc boinc     15847 Jan 14 10:12 start_atlas.sh
[2026-01-14 11:32:33] drwxrwx--x 2 boinc boinc      4096 Jan 14 10:12 shared
[2026-01-14 11:32:33] -rw-r--r-- 1 boinc boinc         0 Jan 14 10:12 boinc_setup_complete
[2026-01-14 11:32:33] -rw-r--r-- 1 boinc boinc      6209 Jan 14 10:12 init_data.xml
[2026-01-14 11:32:33] -rw-r--r-- 1 boinc boinc         0 Jan 14 10:12 boinc_lockfile
[2026-01-14 11:32:33] -rw-r--r-- 1 boinc boinc      2504 Jan 14 10:12 pandaJob.out
[2026-01-14 11:32:33] -rw------- 1 boinc boinc    997218 Jan 14 10:12 agis_schedconf.cvmfs.json
[2026-01-14 11:32:33] -rw------- 1 boinc boinc   1516246 Jan 14 10:12 agis_ddmendpoints.agis.ALL.json
[2026-01-14 11:32:33] drwx------ 5 boinc boinc      4096 Jan 14 10:12 pilot3
[2026-01-14 11:32:33] -rw------- 1 boinc boinc        95 Jan 14 11:30 pilot_heartbeat.json
[2026-01-14 11:32:33] -rw------- 1 boinc boinc 148839807 Jan 14 11:31 HITS.48215263._006944.pool.root.1
[2026-01-14 11:32:33] -rw-r--r-- 1 boinc boinc       529 Jan 14 11:31 boinc_task_state.xml
[2026-01-14 11:32:33] -rw------- 1 boinc boinc      1010 Jan 14 11:31 memory_monitor_summary.json
[2026-01-14 11:32:33] -rw------- 1 boinc boinc    242442 Jan 14 11:31 log.48215263._006944.job.log.tgz.1
[2026-01-14 11:32:33] -rw------- 1 boinc boinc      7747 Jan 14 11:31 heartbeat.json
[2026-01-14 11:32:33] -rw-r--r-- 1 boinc boinc      8192 Jan 14 11:32 boinc_mmap_file
[2026-01-14 11:32:33] -rw-r--r-- 1 boinc boinc        26 Jan 14 11:32 wrapper_checkpoint.txt
[2026-01-14 11:32:33] -rw------- 1 boinc boinc      4628 Jan 14 11:32 pilotlog.txt
[2026-01-14 11:32:33] -rw------- 1 boinc boinc    699743 Jan 14 11:32 log.48215263._006944.job.log.1
[2026-01-14 11:32:33] -rw------- 1 boinc boinc       357 Jan 14 11:32 output.list
[2026-01-14 11:32:33] -rw-r--r-- 1 boinc boinc       620 Jan 14 11:32 runtime_log
[2026-01-14 11:32:33] -rw------- 1 boinc boinc    962560 Jan 14 11:32 result.tar.gz
[2026-01-14 11:32:33] -rw-r--r-- 1 boinc boinc      8912 Jan 14 11:32 runtime_log.err
[2026-01-14 11:32:33] -rw------- 1 boinc boinc       659 Jan 14 11:32 AX7NDmJe1z8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTGpKDm8oHa0m.diag
[2026-01-14 11:32:33] -rw-r--r-- 1 boinc boinc      6454 Jan 14 11:32 stderr.txt
[2026-01-14 11:32:33] HITS file was successfully produced:
[2026-01-14 11:32:33] -rw------- 1 boinc boinc 148839807 Jan 14 11:31 shared/HITS.pool.root.1
[2026-01-14 11:32:33]  *** Contents of shared directory: ***
[2026-01-14 11:32:33] total 731292
[2026-01-14 11:32:33] -rw-r--r-- 2 boinc boinc 598418649 Jan 14 10:12 ATLAS.root_0
[2026-01-14 11:32:33] -rw-r--r-- 2 boinc boinc    592397 Jan 14 10:12 input.tar.gz
[2026-01-14 11:32:33] -rw-r--r-- 2 boinc boinc     15847 Jan 14 10:12 start_atlas.sh
[2026-01-14 11:32:33] -rw------- 1 boinc boinc 148839807 Jan 14 11:31 HITS.pool.root.1
[2026-01-14 11:32:33] -rw------- 1 boinc boinc    962560 Jan 14 11:32 result.tar.gz
11:32:34 (158526): run_atlas exited; CPU time 9096.719563
11:32:34 (158526): called boinc_finish(0)

</stderr_txt>
]]>

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