Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:59:34 (4339): wrapper (7.7.26015): starting
10:59:34 (4339): wrapper: running run_atlas (--nthreads 8)
[2026-01-14 10:59:34] Arguments: --nthreads 8
[2026-01-14 10:59:34] Threads: 8
[2026-01-14 10:59:34] Checking for CVMFS
[2026-01-14 10:59:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 10:59:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 10:59:36] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 10:59:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 10:59:38] 2.11.2.0 27707 42466 101880 155125 3 60 16396719 25165824 96 130560 0 16966279 99.859 10315366 2857 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-14 10:59:38] CVMFS is ok
[2026-01-14 10:59:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 10:59:38] Checking for apptainer binary...
[2026-01-14 10:59:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 10:59:38] Running /usr/bin/apptainer --version
[2026-01-14 10:59:38] apptainer version 1.3.2-1.el7
[2026-01-14 10:59:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 10:59:55] cg-vwn470.simple-grid.lan
[2026-01-14 10:59:55] apptainer works
[2026-01-14 10:59:55] Set ATHENA_PROC_NUMBER=8
[2026-01-14 10:59:55] Set ATHENA_CORE_NUMBER=8
[2026-01-14 10:59:55] Starting ATLAS job with PandaID=6969271948
[2026-01-14 10:59:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 13:49:46]  *** The last 200 lines of the pilot log: ***
[2026-01-14 13:49:46] 2026-01-14 12:48:47,614 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-14 13:49:46] 2026-01-14 12:48:47,615 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2026-01-14 13:49:46] 2026-01-14 12:48:47,617 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6969271948/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 13:49:46] 2026-01-14 12:48:47,617 | INFO     | extracted standard info from prmon json
[2026-01-14 13:49:46] 2026-01-14 12:48:47,617 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 13:49:46] 2026-01-14 12:48:47,618 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 13:49:46] 2026-01-14 12:48:47,618 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 13:49:46] 2026-01-14 12:48:47,618 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 13:49:46] 2026-01-14 12:48:47,621 | INFO     | fitting pss+swap vs Time
[2026-01-14 13:49:46] 2026-01-14 12:48:47,622 | INFO     | sum of square deviations: 1067554900.0
[2026-01-14 13:49:46] 2026-01-14 12:48:47,623 | INFO     | sum of deviations: 45033739769.0
[2026-01-14 13:49:46] 2026-01-14 12:48:47,623 | INFO     | mean x: 1768390189.0
[2026-01-14 13:49:46] 2026-01-14 12:48:47,623 | INFO     | mean y: 2475130.728476821
[2026-01-14 13:49:46] 2026-01-14 12:48:47,623 | INFO     | intersect: -74595303008.3431
[2026-01-14 13:49:46] 2026-01-14 12:48:47,624 | INFO     | chi2: 8.096257357746962
[2026-01-14 13:49:46] 2026-01-14 12:48:47,624 | INFO     | sum of square deviations: 964976232.5
[2026-01-14 13:49:46] 2026-01-14 12:48:47,625 | INFO     | sum of deviations: 54117729229.0
[2026-01-14 13:49:46] 2026-01-14 12:48:47,625 | INFO     | mean x: 1768390036.5
[2026-01-14 13:49:46] 2026-01-14 12:48:47,625 | INFO     | mean y: 2488230.904109589
[2026-01-14 13:49:46] 2026-01-14 12:48:47,625 | INFO     | intersect: -99172237470.5068
[2026-01-14 13:49:46] 2026-01-14 12:48:47,626 | INFO     | chi2: 7.430491453185762
[2026-01-14 13:49:46] 2026-01-14 12:48:47,626 | INFO     | current chi2=7.430491453185762 (change=8.223131690893664 %)
[2026-01-14 13:49:46] 2026-01-14 12:48:47,626 | INFO     | right removable region: 145
[2026-01-14 13:49:46] 2026-01-14 12:48:47,626 | INFO     | sum of square deviations: 964976232.5
[2026-01-14 13:49:46] 2026-01-14 12:48:47,627 | INFO     | sum of deviations: -8297498404.000002
[2026-01-14 13:49:46] 2026-01-14 12:48:47,627 | INFO     | mean x: 1768390341.5
[2026-01-14 13:49:46] 2026-01-14 12:48:47,628 | INFO     | mean y: 2554333.1506849313
[2026-01-14 13:49:46] 2026-01-14 12:48:47,628 | INFO     | intersect: 15208334063.321674
[2026-01-14 13:49:46] 2026-01-14 12:48:47,628 | INFO     | chi2: 2.8068584436469077
[2026-01-14 13:49:46] 2026-01-14 12:48:47,628 | INFO     | current chi2=2.8068584436469077 (change=65.3314078391895 %)
[2026-01-14 13:49:46] 2026-01-14 12:48:47,628 | INFO     | sum of square deviations: 869188390.0
[2026-01-14 13:49:46] 2026-01-14 12:48:47,629 | INFO     | sum of deviations: -38300835855.0
[2026-01-14 13:49:46] 2026-01-14 12:48:47,629 | INFO     | mean x: 1768390494.0
[2026-01-14 13:49:46] 2026-01-14 12:48:47,630 | INFO     | mean y: 2601737.744680851
[2026-01-14 13:49:46] 2026-01-14 12:48:47,630 | INFO     | intersect: 77926829462.68744
[2026-01-14 13:49:46] 2026-01-14 12:48:47,630 | INFO     | chi2: 0.9857441197246437
[2026-01-14 13:49:46] 2026-01-14 12:48:47,630 | INFO     | current chi2=0.9857441197246437 (change=64.88087520210382 %)
[2026-01-14 13:49:46] 2026-01-14 12:48:47,630 | INFO     | sum of square deviations: 779958810.0
[2026-01-14 13:49:46] 2026-01-14 12:48:47,640 | INFO     | sum of deviations: -40080574905.0
[2026-01-14 13:49:46] 2026-01-14 12:48:47,640 | INFO     | mean x: 1768390646.5
[2026-01-14 13:49:46] 2026-01-14 12:48:47,640 | INFO     | mean y: 2604648.617647059
[2026-01-14 13:49:46] 2026-01-14 12:48:47,640 | INFO     | intersect: 90876780130.19804
[2026-01-14 13:49:46] 2026-01-14 12:48:47,640 | INFO     | chi2: 0.9232536692857898
[2026-01-14 13:49:46] 2026-01-14 12:48:47,640 | INFO     | current chi2=0.9232536692857898 (change=6.3394190427745 %)
[2026-01-14 13:49:46] 2026-01-14 12:48:47,640 | INFO     | left removable region: 30
[2026-01-14 13:49:46] 2026-01-14 12:48:47,641 | INFO     | sum of square deviations: 471562330.0
[2026-01-14 13:49:46] 2026-01-14 12:48:47,641 | INFO     | sum of deviations: -18902220181.999996
[2026-01-14 13:49:46] 2026-01-14 12:48:47,642 | INFO     | mean x: 1768390921.0
[2026-01-14 13:49:46] 2026-01-14 12:48:47,642 | INFO     | mean y: 2602832.0956521737
[2026-01-14 13:49:46] 2026-01-14 12:48:47,642 | INFO     | intersect: 70887218565.90916
[2026-01-14 13:49:46] 2026-01-14 12:48:47,642 | INFO     | chi2: 0.11387085868255538
[2026-01-14 13:49:46] 2026-01-14 12:48:47,642 | INFO     | current memory leak: -40.08 B/s (using 115 data points, chi2=0.11)
[2026-01-14 13:49:46] 2026-01-14 12:48:47,643 | INFO     | could have reported an average CPU frequency of 2249 MHz (8 samples)
[2026-01-14 13:49:46] 2026-01-14 12:48:47,643 | INFO     | ..............................
[2026-01-14 13:49:46] 2026-01-14 12:48:47,643 | INFO     | . Timing measurements:
[2026-01-14 13:49:46] 2026-01-14 12:48:47,643 | INFO     | . get job = 0 s
[2026-01-14 13:49:46] 2026-01-14 12:48:47,643 | INFO     | . initial setup = 11 s
[2026-01-14 13:49:46] 2026-01-14 12:48:47,643 | INFO     | . payload setup = 158 s
[2026-01-14 13:49:46] 2026-01-14 12:48:47,644 | INFO     | . stage-in = 0 s
[2026-01-14 13:49:46] 2026-01-14 12:48:47,644 | INFO     | . payload execution = 9371 s
[2026-01-14 13:49:46] 2026-01-14 12:48:47,644 | INFO     | . stage-out = 3 s
[2026-01-14 13:49:46] 2026-01-14 12:48:47,644 | INFO     | . log creation = 1 s
[2026-01-14 13:49:46] 2026-01-14 12:48:47,644 | INFO     | ..............................
[2026-01-14 13:49:46] 2026-01-14 12:48:47,777 | INFO     | 
[2026-01-14 13:49:46] 2026-01-14 12:48:47,777 | INFO     | job summary report
[2026-01-14 13:49:46] 2026-01-14 12:48:47,777 | INFO     | --------------------------------------------------
[2026-01-14 13:49:46] 2026-01-14 12:48:47,777 | INFO     | PanDA job id: 6969271948
[2026-01-14 13:49:46] 2026-01-14 12:48:47,777 | INFO     | task id: 48215263
[2026-01-14 13:49:46] 2026-01-14 12:48:47,777 | INFO     | errors: (none)
[2026-01-14 13:49:46] 2026-01-14 12:48:47,778 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 13:49:46] 2026-01-14 12:48:47,778 | INFO     | pilot state: finished 
[2026-01-14 13:49:46] 2026-01-14 12:48:47,778 | INFO     | transexitcode: 0
[2026-01-14 13:49:46] 2026-01-14 12:48:47,778 | INFO     | exeerrorcode: 0
[2026-01-14 13:49:46] 2026-01-14 12:48:47,778 | INFO     | exeerrordiag: 
[2026-01-14 13:49:46] 2026-01-14 12:48:47,778 | INFO     | exitcode: 0
[2026-01-14 13:49:46] 2026-01-14 12:48:47,778 | INFO     | exitmsg: OK
[2026-01-14 13:49:46] 2026-01-14 12:48:47,778 | INFO     | cpuconsumptiontime: 33445 s
[2026-01-14 13:49:46] 2026-01-14 12:48:47,778 | INFO     | nevents: 400
[2026-01-14 13:49:46] 2026-01-14 12:48:47,778 | INFO     | neventsw: 0
[2026-01-14 13:49:46] 2026-01-14 12:48:47,778 | INFO     | pid: 14606
[2026-01-14 13:49:46] 2026-01-14 12:48:47,779 | INFO     | pgrp: 14606
[2026-01-14 13:49:46] 2026-01-14 12:48:47,779 | INFO     | corecount: 8
[2026-01-14 13:49:46] 2026-01-14 12:48:47,779 | INFO     | event service: False
[2026-01-14 13:49:46] 2026-01-14 12:48:47,779 | INFO     | sizes: {0: 2283717, 1: 2283972, 12: 2283972, 23: 2284000, 34: 2284028, 44: 2284056, 55: 2284212, 66: 2284240, 77: 2284268, 87: 2284324, 98: 2284352, 104: 2284922, 
[2026-01-14 13:49:46] 2026-01-14 12:48:47,779 | INFO     | --------------------------------------------------
[2026-01-14 13:49:46] 2026-01-14 12:48:47,779 | INFO     | 
[2026-01-14 13:49:46] 2026-01-14 12:48:47,779 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-01-14 13:49:46] 2026-01-14 12:48:48,240 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 13:49:46] 2026-01-14 12:48:48,241 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 13:49:46] 2026-01-14 12:48:48,241 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 13:49:46] 2026-01-14 12:48:48,241 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 13:49:46] 2026-01-14 12:48:48,241 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 13:49:46] 2026-01-14 12:48:48,241 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 13:49:46] 2026-01-14 12:48:48,241 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 13:49:46] 2026-01-14 12:48:48,241 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 13:49:46] 2026-01-14 12:48:48,241 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 13:49:46] 2026-01-14 12:48:48,241 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 13:49:46] 2026-01-14 12:48:48,242 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 13:49:46] 2026-01-14 12:48:48,242 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 13:49:46] 2026-01-14 12:48:48,242 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 13:49:46] 2026-01-14 12:48:48,242 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 13:49:46] 2026-01-14 12:48:48,242 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 13:49:46] 2026-01-14 12:48:48,242 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 13:49:46] 2026-01-14 12:48:48,242 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 13:49:46] 2026-01-14 12:48:48,242 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 13:49:46] 2026-01-14 12:48:48,242 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 13:49:46] 2026-01-14 12:48:48,243 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 13:49:46] 2026-01-14 12:48:48,243 | INFO     | job 6969271948 has completed (purged errors)
[2026-01-14 13:49:46] 2026-01-14 12:48:48,243 | INFO     | overall cleanup function is called
[2026-01-14 13:49:46] 2026-01-14 12:48:49,252 | INFO     | --- collectZombieJob: --- 10, [14606]
[2026-01-14 13:49:46] 2026-01-14 12:48:49,252 | INFO     | zombie collector waiting for pid 14606
[2026-01-14 13:49:46] 2026-01-14 12:48:49,252 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 13:49:46] 2026-01-14 12:48:49,252 | INFO     | collected zombie processes
[2026-01-14 13:49:46] 2026-01-14 12:48:49,252 | INFO     | will attempt to kill all subprocesses of pid=14606
[2026-01-14 13:49:46] 2026-01-14 12:48:49,339 | INFO     | process IDs to be killed: [14606] (in reverse order)
[2026-01-14 13:49:46] 2026-01-14 12:48:49,925 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 13:49:46] 2026-01-14 12:48:49,925 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 13:49:46] 2026-01-14 12:48:49,927 | INFO     | did not find any defunct processes belonging to 14606
[2026-01-14 13:49:46] 2026-01-14 12:48:49,929 | INFO     | did not find any defunct processes belonging to 14606
[2026-01-14 13:49:46] 2026-01-14 12:48:49,929 | INFO     | ready for new job
[2026-01-14 13:49:46] 2026-01-14 12:48:49,929 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 13:49:46] 2026-01-14 12:48:49,931 | INFO     | ***************************************
[2026-01-14 13:49:46] 2026-01-14 12:48:49,931 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 13:49:46] 2026-01-14 12:48:49,931 | INFO     | ***************************************
[2026-01-14 13:49:46] 2026-01-14 12:48:49,932 | INFO     | 
[2026-01-14 13:49:46] 2026-01-14 12:48:49,932 | INFO     | pilot is running in a VM
[2026-01-14 13:49:46] 2026-01-14 12:48:49,932 | INFO     | architecture information:
[2026-01-14 13:49:46] 2026-01-14 12:48:49,945 | INFO     | executing command: cat /etc/os-release
[2026-01-14 13:49:46] 2026-01-14 12:48:50,245 | INFO     | cat /etc/os-release:
[2026-01-14 13:49:46] NAME="CentOS Linux"
[2026-01-14 13:49:46] VERSION="7 (Core)"
[2026-01-14 13:49:46] ID="centos"
[2026-01-14 13:49:46] ID_LIKE="rhel fedora"
[2026-01-14 13:49:46] VERSION_ID="7"
[2026-01-14 13:49:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 13:49:46] ANSI_COLOR="0;31"
[2026-01-14 13:49:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 13:49:46] HOME_URL="https://www.centos.org/"
[2026-01-14 13:49:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 13:49:46] 
[2026-01-14 13:49:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 13:49:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 13:49:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 13:49:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 13:49:46] 
[2026-01-14 13:49:46] 2026-01-14 12:48:50,246 | INFO     | ***************************************
[2026-01-14 13:49:46] 2026-01-14 12:48:50,749 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-01-14 13:49:46] 2026-01-14 12:48:51,007 | INFO     | sufficient remaining disk space (493802749952 B)
[2026-01-14 13:49:46] 2026-01-14 12:48:51,008 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 13:49:46] 2026-01-14 12:48:51,008 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 13:49:46] 2026-01-14 12:48:51,008 | INFO     | update_server=False
[2026-01-14 13:49:46] 2026-01-14 12:48:51,008 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 13:49:46] 2026-01-14 12:48:51,009 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 13:49:46] 2026-01-14 12:48:51,087 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 13:49:46] 2026-01-14 12:48:51,087 | INFO     | aborting loop
[2026-01-14 13:49:46] 2026-01-14 12:48:51,237 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 13:49:46] 2026-01-14 12:48:51,769 | INFO     | all job control threads have been joined
[2026-01-14 13:49:46] 2026-01-14 12:48:51,808 | INFO     | all data control threads have been joined
[2026-01-14 13:49:46] 2026-01-14 12:48:51,915 | INFO     | all payload control threads have been joined
[2026-01-14 13:49:46] 2026-01-14 12:48:52,014 | INFO     | [job] retrieve thread has finished
[2026-01-14 13:49:46] 2026-01-14 12:48:52,093 | INFO     | [job] job monitor thread has finished
[2026-01-14 13:49:46] 2026-01-14 12:48:52,126 | INFO     | [payload] failed_post thread has finished
[2026-01-14 13:49:46] 2026-01-14 12:48:52,131 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 13:49:46] 2026-01-14 12:48:52,471 | INFO     | [payload] validate_post thread has finished
[2026-01-14 13:49:46] 2026-01-14 12:48:52,535 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 13:49:46] 2026-01-14 12:48:52,775 | INFO     | [job] control thread has finished
[2026-01-14 13:49:46] 2026-01-14 12:48:52,786 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 13:49:46] 2026-01-14 12:48:52,814 | INFO     | [data] control thread has finished
[2026-01-14 13:49:46] 2026-01-14 12:48:52,819 | INFO     | [job] validate thread has finished
[2026-01-14 13:49:46] 2026-01-14 12:48:52,921 | INFO     | [payload] control thread has finished
[2026-01-14 13:49:46] 2026-01-14 12:48:53,016 | INFO     | [data] copytool_out thread has finished
[2026-01-14 13:49:46] 2026-01-14 12:48:53,267 | INFO     | [data] copytool_in thread has finished
[2026-01-14 13:49:46] 2026-01-14 12:48:53,398 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 13:49:46] 2026-01-14 12:48:53,499 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 13:49:46] 2026-01-14 12:48:53,792 | INFO     | [job] queue monitor thread has finished
[2026-01-14 13:49:46] 2026-01-14 12:48:55,246 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 13:49:46] 2026-01-14 12:48:58,014 [wrapper] supervise_pilot (15 min periods counter: 12)
[2026-01-14 13:49:46] 2026-01-14 12:49:19,817 | INFO     | PID=8082 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-14 13:49:46] 2026-01-14 12:49:19,817 | INFO     | .. there are 2 such processes running
[2026-01-14 13:49:46] 2026-01-14 12:49:19,817 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 13:49:46] 2026-01-14 12:49:19,817 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 13:49:46] 2026-01-14 12:49:19,817 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 13:49:46] 2026-01-14 12:49:34,275 | INFO     | [monitor] cgroup control has ended
[2026-01-14 13:49:46] 2026-01-14 12:49:35,152 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140506958001984)>', '<ExcThread(monitor, started 140506231207680)>']
[2026-01-14 13:49:46] 2026-01-14 12:49:35,913 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 13:49:46] 2026-01-14 12:49:35,913 | INFO     | [monitor] control thread has ended
[2026-01-14 13:49:46] 2026-01-14 12:49:40,188 | INFO     | all workflow threads have been joined
[2026-01-14 13:49:46] 2026-01-14 12:49:40,188 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 13:49:46] 2026-01-14 12:49:40,188 | INFO     | traces error code: 0
[2026-01-14 13:49:46] 2026-01-14 12:49:40,188 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 13:49:46] 2026-01-14 12:49:40,691 [wrapper] ==== pilot stdout END ====
[2026-01-14 13:49:46] 2026-01-14 12:49:40,774 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 13:49:46] 2026-01-14 12:49:40,880 [wrapper] pilotpid: 8082
[2026-01-14 13:49:46] 2026-01-14 12:49:40,982 [wrapper] Pilot exit status: 0
[2026-01-14 13:49:46] 2026-01-14 12:49:41,552 [wrapper] pandaids: 6969271948
[2026-01-14 13:49:46] 2026-01-14 12:49:42,676 [wrapper] cleanup supervisor_pilot  1314 8083
[2026-01-14 13:49:46] 2026-01-14 12:49:42,745 [wrapper] Test setup, not cleaning
[2026-01-14 13:49:46] 2026-01-14 12:49:42,839 [wrapper] apfmon messages muted
[2026-01-14 13:49:46] 2026-01-14 12:49:42,936 [wrapper] ==== wrapper stdout END ====
[2026-01-14 13:49:46] 2026-01-14 12:49:43,038 [wrapper] ==== wrapper stderr END ====
[2026-01-14 13:49:46]  *** Error codes and diagnostics ***
[2026-01-14 13:49:46]     "exeErrorCode": 0,
[2026-01-14 13:49:46]     "exeErrorDiag": "",
[2026-01-14 13:49:46]     "pilotErrorCode": 0,
[2026-01-14 13:49:46]     "pilotErrorDiag": "",
[2026-01-14 13:49:46]  *** Listing of results directory ***
[2026-01-14 13:49:46] total 740004
[2026-01-14 13:49:46] -rwx------. 1 boinc boinc     36322 Jan 13 23:02 runpilot2-wrapper.sh
[2026-01-14 13:49:46] -rw-r--r--. 1 boinc boinc    579449 Jan 13 23:12 pilot3.tar.gz
[2026-01-14 13:49:46] -rw-r--r--. 1 boinc boinc      5112 Jan 13 23:20 queuedata.json
[2026-01-14 13:49:46] -rw-r--r--. 1 boinc boinc       100 Jan 14 10:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 13:49:46] -rwxr-xr-x. 1 boinc boinc      7986 Jan 14 10:59 run_atlas
[2026-01-14 13:49:46] -rw-r--r--. 1 boinc boinc       105 Jan 14 10:59 job.xml
[2026-01-14 13:49:46] -rw-r--r--. 1 boinc boinc      6389 Jan 14 10:59 init_data.xml
[2026-01-14 13:49:46] -rw-r--r--. 2 boinc boinc 598418649 Jan 14 10:59 EVNT.32794306._000278.pool.root.1
[2026-01-14 13:49:46] -rw-r--r--. 2 boinc boinc     15847 Jan 14 10:59 start_atlas.sh
[2026-01-14 13:49:46] drwxrwx--x. 2 boinc boinc        68 Jan 14 10:59 shared
[2026-01-14 13:49:46] -rw-r--r--. 2 boinc boinc    592394 Jan 14 10:59 input.tar.gz
[2026-01-14 13:49:46] -rw-r--r--. 1 boinc boinc         0 Jan 14 10:59 boinc_lockfile
[2026-01-14 13:49:46] -rw-r--r--. 1 boinc boinc      2504 Jan 14 10:59 pandaJob.out
[2026-01-14 13:49:46] -rw-------. 1 boinc boinc    997218 Jan 14 11:04 agis_schedconf.cvmfs.json
[2026-01-14 13:49:46] -rw-------. 1 boinc boinc   1516246 Jan 14 11:04 agis_ddmendpoints.agis.ALL.json
[2026-01-14 13:49:46] drwx------. 5 boinc boinc      4096 Jan 14 11:04 pilot3
[2026-01-14 13:49:46] -rw-------. 1 boinc boinc 152014044 Jan 14 13:45 HITS.48215263._006929.pool.root.1
[2026-01-14 13:49:46] -rw-r--r--. 1 boinc boinc       531 Jan 14 13:46 boinc_task_state.xml
[2026-01-14 13:49:46] -rw-------. 1 boinc boinc      1028 Jan 14 13:46 memory_monitor_summary.json
[2026-01-14 13:49:46] -rw-------. 1 boinc boinc    381125 Jan 14 13:46 log.48215263._006929.job.log.tgz.1
[2026-01-14 13:49:46] -rw-------. 1 boinc boinc        95 Jan 14 13:48 pilot_heartbeat.json
[2026-01-14 13:49:46] -rw-------. 1 boinc boinc      7777 Jan 14 13:48 heartbeat.json
[2026-01-14 13:49:46] -rw-r--r--. 1 boinc boinc      8192 Jan 14 13:49 boinc_mmap_file
[2026-01-14 13:49:46] -rw-r--r--. 1 boinc boinc        28 Jan 14 13:49 wrapper_checkpoint.txt
[2026-01-14 13:49:46] -rw-------. 1 boinc boinc      4883 Jan 14 13:49 pilotlog.txt
[2026-01-14 13:49:46] -rw-------. 1 boinc boinc   1328707 Jan 14 13:49 log.48215263._006929.job.log.1
[2026-01-14 13:49:46] -rw-------. 1 boinc boinc       357 Jan 14 13:49 output.list
[2026-01-14 13:49:46] -rw-r--r--. 1 boinc boinc       620 Jan 14 13:49 runtime_log
[2026-01-14 13:49:46] -rw-------. 1 boinc boinc   1730560 Jan 14 13:49 result.tar.gz
[2026-01-14 13:49:46] -rw-r--r--. 1 boinc boinc      8817 Jan 14 13:49 runtime_log.err
[2026-01-14 13:49:46] -rw-------. 1 boinc boinc       655 Jan 14 13:49 RomNDmJe1z8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmEGpKDmSeNVNo.diag
[2026-01-14 13:49:46] -rw-r--r--. 1 boinc boinc     20727 Jan 14 13:49 stderr.txt
[2026-01-14 13:49:46] HITS file was successfully produced:
[2026-01-14 13:49:46] -rw-------. 1 boinc boinc 152014044 Jan 14 13:45 shared/HITS.pool.root.1
[2026-01-14 13:49:46]  *** Contents of shared directory: ***
[2026-01-14 13:49:46] total 735136
[2026-01-14 13:49:46] -rw-r--r--. 2 boinc boinc 598418649 Jan 14 10:59 ATLAS.root_0
[2026-01-14 13:49:46] -rw-r--r--. 2 boinc boinc     15847 Jan 14 10:59 start_atlas.sh
[2026-01-14 13:49:46] -rw-r--r--. 2 boinc boinc    592394 Jan 14 10:59 input.tar.gz
[2026-01-14 13:49:46] -rw-------. 1 boinc boinc 152014044 Jan 14 13:45 HITS.pool.root.1
[2026-01-14 13:49:46] -rw-------. 1 boinc boinc   1730560 Jan 14 13:49 result.tar.gz
13:49:47 (4339): run_atlas exited; CPU time 33541.922603
13:49:47 (4339): called boinc_finish(0)

</stderr_txt>
]]>

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