Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:49:47 (32317): wrapper (7.7.26015): starting
00:49:47 (32317): wrapper: running run_atlas (--nthreads 12)
[2026-01-14 00:49:47] Arguments: --nthreads 12
[2026-01-14 00:49:47] Threads: 12
[2026-01-14 00:49:47] Checking for CVMFS
[2026-01-14 00:49:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 00:49:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 00:49:48] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 00:49:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 00:49:48] 2.11.2.0 2916 357797 98316 155120 3 59 16789045 20275201 1 130560 1 149709010 99.944 22163641 17012 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-14 00:49:48] CVMFS is ok
[2026-01-14 00:49:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 00:49:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 00:49:48] Further information can be found at the LHC@home message board.
[2026-01-14 00:49:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 00:49:48] Checking for apptainer binary...
[2026-01-14 00:49:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 00:49:48] Running /usr/bin/apptainer --version
[2026-01-14 00:49:48] apptainer version 1.3.2-1.el7
[2026-01-14 00:49:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 00:49:50] c-205-23.aglt2.org
[2026-01-14 00:49:50] apptainer works
[2026-01-14 00:49:50] Set ATHENA_PROC_NUMBER=12
[2026-01-14 00:49:50] Set ATHENA_CORE_NUMBER=12
[2026-01-14 00:49:50] Starting ATLAS job with PandaID=6969268853
[2026-01-14 00:49:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 01:39:16]  *** The last 200 lines of the pilot log: ***
[2026-01-14 01:39:16]  is_altstaged=None
[2026-01-14 01:39:16]  is_tar=False
[2026-01-14 01:39:16]  lfn=log.48215263._006161.job.log.tgz.1
[2026-01-14 01:39:16]  mtime=0
[2026-01-14 01:39:16]  protocol_id=None
[2026-01-14 01:39:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-14 01:39:16]  replicas=None
[2026-01-14 01:39:16]  scope=mc23_13p6TeV
[2026-01-14 01:39:16]  status=None
[2026-01-14 01:39:16]  status_code=0
[2026-01-14 01:39:16]  storage_token=
[2026-01-14 01:39:16]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6969268853/log.48215263._006161.job.log.tgz.1
[2026-01-14 01:39:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7c/95/log.48215263._006161.job.log.tgz.1
[2026-01-14 01:39:16]  workdir=None
[2026-01-14 01:39:16] ]
[2026-01-14 01:39:16] 2026-01-14 06:38:33,094 | INFO     | transferring file log.48215263._006161.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6969268853/log.48215263._006161.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-14 01:39:16] 2026-01-14 06:38:33,094 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6969268853/log.48215263._006161.job.log.tgz.1 /tmp/boinchome/slots/0/log.48215263._006161.job
[2026-01-14 01:39:16] 2026-01-14 06:38:33,105 | INFO     | monitor loop #219: job 0:6969268853 is in state 'stageout'
[2026-01-14 01:39:16] 2026-01-14 06:38:33,105 | WARNING  | aborting job monitor tasks since payload process 11675 is not running
[2026-01-14 01:39:16] 2026-01-14 06:38:33,115 | INFO     | adding to output.list: log.48215263._006161.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7c/95/log.48215263._006161.job.log.tg
[2026-01-14 01:39:16] 2026-01-14 06:38:33,116 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-14 01:39:16] 2026-01-14 06:38:33,116 | INFO     | summary of transferred files:
[2026-01-14 01:39:16] 2026-01-14 06:38:33,116 | INFO     |  -- lfn=log.48215263._006161.job.log.tgz.1, status_code=0, status=transferred
[2026-01-14 01:39:16] 2026-01-14 06:38:33,116 | INFO     | stage-out finished correctly
[2026-01-14 01:39:16] 2026-01-14 06:38:33,199 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-14 01:39:16] 2026-01-14 06:38:33,277 | INFO     | job 6969268853 has state=finished
[2026-01-14 01:39:16] 2026-01-14 06:38:33,278 | INFO     | preparing for final server update for job 6969268853 in state='finished'
[2026-01-14 01:39:16] 2026-01-14 06:38:33,278 | INFO     | this job has now completed (state=finished)
[2026-01-14 01:39:16] 2026-01-14 06:38:33,279 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-14 01:39:16] 2026-01-14 06:38:33,279 | INFO     | log transfer has been attempted: DONE
[2026-01-14 01:39:16] 2026-01-14 06:38:33,279 | INFO     | job 6969268853 has finished - writing final server update
[2026-01-14 01:39:16] 2026-01-14 06:38:33,279 | INFO     | total number of processed events: 400 (read)
[2026-01-14 01:39:16] 2026-01-14 06:38:33,280 | INFO     | executing command: lscpu
[2026-01-14 01:39:16] 2026-01-14 06:38:33,303 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-14 01:39:16] 2026-01-14 06:38:35,046 | INFO     | time since job start (2909s) is within the limit (349056.0s)
[2026-01-14 01:39:16] 2026-01-14 06:38:35,608 | INFO     | monitor loop #220: job 0:6969268853 is in state 'finished'
[2026-01-14 01:39:16] 2026-01-14 06:38:35,608 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 01:39:16] 2026-01-14 06:38:37,051 | INFO     | time since job start (2911s) is within the limit (349056.0s)
[2026-01-14 01:39:16] 2026-01-14 06:38:38,006 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-14 01:39:16] 2026-01-14 06:38:38,010 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2026-01-14 01:39:16] 2026-01-14 06:38:38,011 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6969268853/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 01:39:16] 2026-01-14 06:38:38,012 | INFO     | extracted standard info from prmon json
[2026-01-14 01:39:16] 2026-01-14 06:38:38,012 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 01:39:16] 2026-01-14 06:38:38,012 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 01:39:16] 2026-01-14 06:38:38,012 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 01:39:16] 2026-01-14 06:38:38,012 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 01:39:16] 2026-01-14 06:38:38,014 | INFO     | fitting pss+swap vs Time
[2026-01-14 01:39:16] 2026-01-14 06:38:38,014 | INFO     | sum of square deviations: 21358540.0
[2026-01-14 01:39:16] 2026-01-14 06:38:38,014 | INFO     | sum of deviations: -3097876215.9999995
[2026-01-14 01:39:16] 2026-01-14 06:38:38,014 | INFO     | mean x: 1768371360.0
[2026-01-14 01:39:16] 2026-01-14 06:38:38,014 | INFO     | mean y: 2907199.6829268294
[2026-01-14 01:39:16] 2026-01-14 06:38:38,014 | INFO     | intersect: 256490269032.4474
[2026-01-14 01:39:16] 2026-01-14 06:38:38,015 | INFO     | chi2: 0.036873219998790244
[2026-01-14 01:39:16] 2026-01-14 06:38:38,015 | INFO     | current memory leak: -145.04 B/s (using 41 data points, chi2=0.04)
[2026-01-14 01:39:16] 2026-01-14 06:38:38,015 | INFO     | could have reported an average CPU frequency of 1904 MHz (5 samples)
[2026-01-14 01:39:16] 2026-01-14 06:38:38,015 | INFO     | ..............................
[2026-01-14 01:39:16] 2026-01-14 06:38:38,015 | INFO     | . Timing measurements:
[2026-01-14 01:39:16] 2026-01-14 06:38:38,015 | INFO     | . get job = 0 s
[2026-01-14 01:39:16] 2026-01-14 06:38:38,015 | INFO     | . initial setup = 2 s
[2026-01-14 01:39:16] 2026-01-14 06:38:38,016 | INFO     | . payload setup = 7 s
[2026-01-14 01:39:16] 2026-01-14 06:38:38,016 | INFO     | . stage-in = 0 s
[2026-01-14 01:39:16] 2026-01-14 06:38:38,016 | INFO     | . payload execution = 2878 s
[2026-01-14 01:39:16] 2026-01-14 06:38:38,016 | INFO     | . stage-out = 0 s
[2026-01-14 01:39:16] 2026-01-14 06:38:38,016 | INFO     | . log creation = 0 s
[2026-01-14 01:39:16] 2026-01-14 06:38:38,016 | INFO     | ..............................
[2026-01-14 01:39:16] 2026-01-14 06:38:38,097 | INFO     | 
[2026-01-14 01:39:16] 2026-01-14 06:38:38,097 | INFO     | job summary report
[2026-01-14 01:39:16] 2026-01-14 06:38:38,097 | INFO     | --------------------------------------------------
[2026-01-14 01:39:16] 2026-01-14 06:38:38,098 | INFO     | PanDA job id: 6969268853
[2026-01-14 01:39:16] 2026-01-14 06:38:38,098 | INFO     | task id: 48215263
[2026-01-14 01:39:16] 2026-01-14 06:38:38,098 | INFO     | errors: (none)
[2026-01-14 01:39:16] 2026-01-14 06:38:38,098 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 01:39:16] 2026-01-14 06:38:38,098 | INFO     | pilot state: finished 
[2026-01-14 01:39:16] 2026-01-14 06:38:38,098 | INFO     | transexitcode: 0
[2026-01-14 01:39:16] 2026-01-14 06:38:38,099 | INFO     | exeerrorcode: 0
[2026-01-14 01:39:16] 2026-01-14 06:38:38,099 | INFO     | exeerrordiag: 
[2026-01-14 01:39:16] 2026-01-14 06:38:38,099 | INFO     | exitcode: 0
[2026-01-14 01:39:16] 2026-01-14 06:38:38,099 | INFO     | exitmsg: OK
[2026-01-14 01:39:16] 2026-01-14 06:38:38,099 | INFO     | cpuconsumptiontime: 29951 s
[2026-01-14 01:39:16] 2026-01-14 06:38:38,099 | INFO     | nevents: 400
[2026-01-14 01:39:16] 2026-01-14 06:38:38,099 | INFO     | neventsw: 0
[2026-01-14 01:39:16] 2026-01-14 06:38:38,100 | INFO     | pid: 11675
[2026-01-14 01:39:16] 2026-01-14 06:38:38,100 | INFO     | pgrp: 11675
[2026-01-14 01:39:16] 2026-01-14 06:38:38,100 | INFO     | corecount: 12
[2026-01-14 01:39:16] 2026-01-14 06:38:38,100 | INFO     | event service: False
[2026-01-14 01:39:16] 2026-01-14 06:38:38,100 | INFO     | sizes: {0: 2283944, 5: 2284206, 11: 2284262, 2889: 2309557, 2890: 2318611, 2895: 2318781}
[2026-01-14 01:39:16] 2026-01-14 06:38:38,100 | INFO     | --------------------------------------------------
[2026-01-14 01:39:16] 2026-01-14 06:38:38,100 | INFO     | 
[2026-01-14 01:39:16] 2026-01-14 06:38:38,100 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-14 01:39:16] 2026-01-14 06:38:38,123 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 01:39:16] 2026-01-14 06:38:38,123 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 01:39:16] 2026-01-14 06:38:38,124 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 01:39:16] 2026-01-14 06:38:38,124 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 01:39:16] 2026-01-14 06:38:38,124 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 01:39:16] 2026-01-14 06:38:38,124 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 01:39:16] 2026-01-14 06:38:38,124 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 01:39:16] 2026-01-14 06:38:38,124 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 01:39:16] 2026-01-14 06:38:38,124 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 01:39:16] 2026-01-14 06:38:38,125 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 01:39:16] 2026-01-14 06:38:38,125 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 01:39:16] 2026-01-14 06:38:38,125 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 01:39:16] 2026-01-14 06:38:38,125 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 01:39:16] 2026-01-14 06:38:38,125 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 01:39:16] 2026-01-14 06:38:38,125 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 01:39:16] 2026-01-14 06:38:38,126 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 01:39:16] 2026-01-14 06:38:38,126 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 01:39:16] 2026-01-14 06:38:38,126 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 01:39:16] 2026-01-14 06:38:38,126 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 01:39:16] 2026-01-14 06:38:38,126 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 01:39:16] 2026-01-14 06:38:38,126 | INFO     | job 6969268853 has completed (purged errors)
[2026-01-14 01:39:16] 2026-01-14 06:38:38,126 | INFO     | overall cleanup function is called
[2026-01-14 01:39:16] 2026-01-14 06:38:39,134 | INFO     | --- collectZombieJob: --- 10, [11675]
[2026-01-14 01:39:16] 2026-01-14 06:38:39,135 | INFO     | zombie collector waiting for pid 11675
[2026-01-14 01:39:16] 2026-01-14 06:38:39,135 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 01:39:16] 2026-01-14 06:38:39,135 | INFO     | collected zombie processes
[2026-01-14 01:39:16] 2026-01-14 06:38:39,135 | INFO     | will attempt to kill all subprocesses of pid=11675
[2026-01-14 01:39:16] 2026-01-14 06:38:39,228 | INFO     | process IDs to be killed: [11675] (in reverse order)
[2026-01-14 01:39:16] 2026-01-14 06:38:39,279 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 01:39:16] 2026-01-14 06:38:39,279 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 01:39:16] 2026-01-14 06:38:39,283 | INFO     | did not find any defunct processes belonging to 11675
[2026-01-14 01:39:16] 2026-01-14 06:38:39,287 | INFO     | did not find any defunct processes belonging to 11675
[2026-01-14 01:39:16] 2026-01-14 06:38:39,287 | INFO     | ready for new job
[2026-01-14 01:39:16] 2026-01-14 06:38:39,287 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 01:39:16] 2026-01-14 06:38:39,288 | INFO     | ***************************************
[2026-01-14 01:39:16] 2026-01-14 06:38:39,289 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 01:39:16] 2026-01-14 06:38:39,289 | INFO     | ***************************************
[2026-01-14 01:39:16] 2026-01-14 06:38:39,289 | INFO     | 
[2026-01-14 01:39:16] 2026-01-14 06:38:39,290 | INFO     | architecture information:
[2026-01-14 01:39:16] 2026-01-14 06:38:39,290 | INFO     | executing command: cat /etc/os-release
[2026-01-14 01:39:16] 2026-01-14 06:38:39,304 | INFO     | cat /etc/os-release:
[2026-01-14 01:39:16] NAME="CentOS Linux"
[2026-01-14 01:39:16] VERSION="7 (Core)"
[2026-01-14 01:39:16] ID="centos"
[2026-01-14 01:39:16] ID_LIKE="rhel fedora"
[2026-01-14 01:39:16] VERSION_ID="7"
[2026-01-14 01:39:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 01:39:16] ANSI_COLOR="0;31"
[2026-01-14 01:39:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 01:39:16] HOME_URL="https://www.centos.org/"
[2026-01-14 01:39:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 01:39:16] 
[2026-01-14 01:39:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 01:39:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 01:39:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 01:39:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 01:39:16] 
[2026-01-14 01:39:16] 2026-01-14 06:38:39,305 | INFO     | ***************************************
[2026-01-14 01:39:16] 2026-01-14 06:38:39,808 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-14 01:39:16] 2026-01-14 06:38:39,825 | INFO     | sufficient remaining disk space (28639756288 B)
[2026-01-14 01:39:16] 2026-01-14 06:38:39,825 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 01:39:16] 2026-01-14 06:38:39,825 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 01:39:16] 2026-01-14 06:38:39,825 | INFO     | update_server=False
[2026-01-14 01:39:16] 2026-01-14 06:38:39,825 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 01:39:16] 2026-01-14 06:38:39,826 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 01:39:16] 2026-01-14 06:38:39,826 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 01:39:16] 2026-01-14 06:38:39,826 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 01:39:16] 2026-01-14 06:38:39,827 | INFO     | aborting loop
[2026-01-14 01:39:16] 2026-01-14 06:38:40,083 | INFO     | all payload control threads have been joined
[2026-01-14 01:39:16] 2026-01-14 06:38:40,515 | INFO     | all job control threads have been joined
[2026-01-14 01:39:16] 2026-01-14 06:38:40,831 | INFO     | [job] retrieve thread has finished
[2026-01-14 01:39:16] 2026-01-14 06:38:40,832 | INFO     | [job] queue monitor thread has finished
[2026-01-14 01:39:16] 2026-01-14 06:38:40,833 | INFO     | [job] job monitor thread has finished
[2026-01-14 01:39:16] 2026-01-14 06:38:40,888 | INFO     | [payload] validate_post thread has finished
[2026-01-14 01:39:16] 2026-01-14 06:38:40,910 | INFO     | all data control threads have been joined
[2026-01-14 01:39:16] 2026-01-14 06:38:41,087 | INFO     | [payload] control thread has finished
[2026-01-14 01:39:16] 2026-01-14 06:38:41,210 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 01:39:16] 2026-01-14 06:38:41,264 | INFO     | [job] validate thread has finished
[2026-01-14 01:39:16] 2026-01-14 06:38:41,332 | INFO     | [payload] failed_post thread has finished
[2026-01-14 01:39:16] 2026-01-14 06:38:41,520 | INFO     | [job] control thread has finished
[2026-01-14 01:39:16] 2026-01-14 06:38:41,616 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 01:39:16] 2026-01-14 06:38:41,626 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 01:39:16] 2026-01-14 06:38:41,809 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 01:39:16] 2026-01-14 06:38:41,914 | INFO     | [data] control thread has finished
[2026-01-14 01:39:16] 2026-01-14 06:38:42,044 | INFO     | [data] copytool_in thread has finished
[2026-01-14 01:39:16] 2026-01-14 06:38:43,216 | INFO     | [data] copytool_out thread has finished
[2026-01-14 01:39:16] 2026-01-14 06:38:43,832 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 01:39:16] 2026-01-14 06:38:50,556 | INFO     | job.realtimelogging is not enabled
[2026-01-14 01:39:16] 2026-01-14 06:38:51,561 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 01:39:16] 2026-01-14 06:39:10,235 | INFO     | PID=4387 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-14 01:39:16] 2026-01-14 06:39:10,235 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 01:39:16] 2026-01-14 06:39:10,235 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 01:39:16] 2026-01-14 06:39:10,236 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 01:39:16] 2026-01-14 06:39:10,290 | INFO     | [monitor] cgroup control has ended
[2026-01-14 01:39:16] 2026-01-14 06:39:10,889 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139890370373440)>', '<ExcThread(monitor, started 139889492354816)>']
[2026-01-14 01:39:16] 2026-01-14 06:39:11,237 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 01:39:16] 2026-01-14 06:39:11,238 | INFO     | [monitor] control thread has ended
[2026-01-14 01:39:16] 2026-01-14 06:39:15,893 | INFO     | all workflow threads have been joined
[2026-01-14 01:39:16] 2026-01-14 06:39:15,893 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 01:39:16] 2026-01-14 06:39:15,893 | INFO     | traces error code: 0
[2026-01-14 01:39:16] 2026-01-14 06:39:15,893 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 01:39:16] 2026-01-14 06:39:15,980 [wrapper] ==== pilot stdout END ====
[2026-01-14 01:39:16] 2026-01-14 06:39:15,984 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 01:39:16] 2026-01-14 06:39:15,988 [wrapper] pilotpid: 4387
[2026-01-14 01:39:16] 2026-01-14 06:39:15,992 [wrapper] Pilot exit status: 0
[2026-01-14 01:39:16] 2026-01-14 06:39:16,009 [wrapper] pandaids: 6969268853
[2026-01-14 01:39:16] 2026-01-14 06:39:16,050 [wrapper] cleanup supervisor_pilot 29444 4389
[2026-01-14 01:39:16] 2026-01-14 06:39:16,054 [wrapper] Test setup, not cleaning
[2026-01-14 01:39:16] 2026-01-14 06:39:16,058 [wrapper] apfmon messages muted
[2026-01-14 01:39:16] 2026-01-14 06:39:16,062 [wrapper] ==== wrapper stdout END ====
[2026-01-14 01:39:16] 2026-01-14 06:39:16,066 [wrapper] ==== wrapper stderr END ====
[2026-01-14 01:39:16]  *** Error codes and diagnostics ***
[2026-01-14 01:39:16]     "exeErrorCode": 0,
[2026-01-14 01:39:16]     "exeErrorDiag": "",
[2026-01-14 01:39:16]     "pilotErrorCode": 0,
[2026-01-14 01:39:16]     "pilotErrorDiag": "",
[2026-01-14 01:39:16]  *** Listing of results directory ***
[2026-01-14 01:39:16] total 732804
[2026-01-14 01:39:16] -rwx------ 1 boincer umatlas     36322 Jan 13 16:59 runpilot2-wrapper.sh
[2026-01-14 01:39:16] -rw-r--r-- 1 boincer umatlas    579449 Jan 13 17:12 pilot3.tar.gz
[2026-01-14 01:39:16] -rw-r--r-- 1 boincer umatlas      5112 Jan 13 17:20 queuedata.json
[2026-01-14 01:39:16] -rw-r--r-- 1 boincer umatlas       100 Jan 14 00:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 01:39:16] -rwxr-xr-x 1 boincer umatlas      7986 Jan 14 00:49 run_atlas
[2026-01-14 01:39:16] -rw-r--r-- 1 boincer umatlas       105 Jan 14 00:49 job.xml
[2026-01-14 01:39:16] -rw-r--r-- 2 boincer umatlas 594201230 Jan 14 00:49 EVNT.32794306._000247.pool.root.1
[2026-01-14 01:39:16] -rw-r--r-- 2 boincer umatlas     15847 Jan 14 00:49 start_atlas.sh
[2026-01-14 01:39:16] drwxrwx--x 2 boincer umatlas      4096 Jan 14 00:49 shared
[2026-01-14 01:39:16] -rw-r--r-- 2 boincer umatlas    592393 Jan 14 00:49 input.tar.gz
[2026-01-14 01:39:16] -rw-r--r-- 1 boincer umatlas         0 Jan 14 00:49 boinc_lockfile
[2026-01-14 01:39:16] -rw-r--r-- 1 boincer umatlas      2504 Jan 14 00:49 pandaJob.out
[2026-01-14 01:39:16] -rw------- 1 boincer umatlas        57 Jan 14 00:49 setup.sh.local
[2026-01-14 01:39:16] -rw------- 1 boincer umatlas    997226 Jan 14 00:50 agis_schedconf.cvmfs.json
[2026-01-14 01:39:16] -rw------- 1 boincer umatlas   1516246 Jan 14 00:50 agis_ddmendpoints.agis.ALL.json
[2026-01-14 01:39:16] drwx------ 5 boincer umatlas      4096 Jan 14 00:50 pilot3
[2026-01-14 01:39:16] -rw-r--r-- 1 boincer umatlas      5952 Jan 14 01:28 init_data.xml
[2026-01-14 01:39:16] -rw------- 1 boincer umatlas 150669005 Jan 14 01:38 HITS.48215263._006161.pool.root.1
[2026-01-14 01:39:16] -rw------- 1 boincer umatlas      1044 Jan 14 01:38 memory_monitor_summary.json
[2026-01-14 01:39:16] -rw-r--r-- 1 boincer umatlas       530 Jan 14 01:38 boinc_task_state.xml
[2026-01-14 01:39:16] -rw------- 1 boincer umatlas    359311 Jan 14 01:38 log.48215263._006161.job.log.tgz.1
[2026-01-14 01:39:16] -rw------- 1 boincer umatlas      7847 Jan 14 01:38 heartbeat.json
[2026-01-14 01:39:16] -rw-r--r-- 1 boincer umatlas      8192 Jan 14 01:39 boinc_mmap_file
[2026-01-14 01:39:16] -rw-r--r-- 1 boincer umatlas        27 Jan 14 01:39 wrapper_checkpoint.txt
[2026-01-14 01:39:16] -rw------- 1 boincer umatlas        95 Jan 14 01:39 pilot_heartbeat.json
[2026-01-14 01:39:16] -rw------- 1 boincer umatlas      4817 Jan 14 01:39 pilotlog.txt
[2026-01-14 01:39:16] -rw------- 1 boincer umatlas    441493 Jan 14 01:39 log.48215263._006161.job.log.1
[2026-01-14 01:39:16] -rw------- 1 boincer umatlas       357 Jan 14 01:39 output.list
[2026-01-14 01:39:16] -rw-r--r-- 1 boincer umatlas       620 Jan 14 01:39 runtime_log
[2026-01-14 01:39:16] -rw------- 1 boincer umatlas    819200 Jan 14 01:39 result.tar.gz
[2026-01-14 01:39:16] -rw-r--r-- 1 boincer umatlas      9344 Jan 14 01:39 runtime_log.err
[2026-01-14 01:39:16] -rw------- 1 boincer umatlas       659 Jan 14 01:39 DLPMDmLb1z8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmT1oKDmX9QkPo.diag
[2026-01-14 01:39:16] -rw-r--r-- 1 boincer umatlas     21466 Jan 14 01:39 stderr.txt
[2026-01-14 01:39:16] HITS file was successfully produced:
[2026-01-14 01:39:16] -rw------- 1 boincer umatlas 150669005 Jan 14 01:38 shared/HITS.pool.root.1
[2026-01-14 01:39:16]  *** Contents of shared directory: ***
[2026-01-14 01:39:16] total 728816
[2026-01-14 01:39:16] -rw-r--r-- 2 boincer umatlas 594201230 Jan 14 00:49 ATLAS.root_0
[2026-01-14 01:39:16] -rw-r--r-- 2 boincer umatlas     15847 Jan 14 00:49 start_atlas.sh
[2026-01-14 01:39:16] -rw-r--r-- 2 boincer umatlas    592393 Jan 14 00:49 input.tar.gz
[2026-01-14 01:39:16] -rw------- 1 boincer umatlas 150669005 Jan 14 01:38 HITS.pool.root.1
[2026-01-14 01:39:16] -rw------- 1 boincer umatlas    819200 Jan 14 01:39 result.tar.gz
01:39:17 (32317): run_atlas exited; CPU time 29928.659003
01:39:17 (32317): called boinc_finish(0)

</stderr_txt>
]]>

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