Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:38:07 (1468): wrapper (7.7.26015): starting
00:38:07 (1468): wrapper: running run_atlas (--nthreads 12)
[2026-01-14 00:38:07] Arguments: --nthreads 12
[2026-01-14 00:38:07] Threads: 12
[2026-01-14 00:38:07] Checking for CVMFS
[2026-01-14 00:38:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 00:38:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 00:38:07] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 00:38:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 00:38:07] 2.11.2.0 2925 357832 99068 155120 3 59 11597797 20275200 1 130560 1 148838666 99.954 20847736 16089 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-14 00:38:07] CVMFS is ok
[2026-01-14 00:38:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 00:38:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 00:38:07] Further information can be found at the LHC@home message board.
[2026-01-14 00:38:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 00:38:07] Checking for apptainer binary...
[2026-01-14 00:38:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 00:38:07] Running /usr/bin/apptainer --version
[2026-01-14 00:38:07] apptainer version 1.3.2-1.el7
[2026-01-14 00:38:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 00:38:08] c-205-10.aglt2.org
[2026-01-14 00:38:08] apptainer works
[2026-01-14 00:38:08] Set ATHENA_PROC_NUMBER=12
[2026-01-14 00:38:08] Set ATHENA_CORE_NUMBER=12
[2026-01-14 00:38:08] Starting ATLAS job with PandaID=6969263948
[2026-01-14 00:38:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 01:27:35]  *** The last 200 lines of the pilot log: ***
[2026-01-14 01:27:35]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-14 01:27:35]  replicas=None
[2026-01-14 01:27:35]  scope=mc23_13p6TeV
[2026-01-14 01:27:35]  status=None
[2026-01-14 01:27:35]  status_code=0
[2026-01-14 01:27:35]  storage_token=
[2026-01-14 01:27:35]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6969263948/log.48215263._004029.job.log.tgz.1
[2026-01-14 01:27:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7e/d6/log.48215263._004029.job.log.tgz.1
[2026-01-14 01:27:35]  workdir=None
[2026-01-14 01:27:35] ]
[2026-01-14 01:27:35] 2026-01-14 06:26:55,579 | INFO     | transferring file log.48215263._004029.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6969263948/log.48215263._004029.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-14 01:27:35] 2026-01-14 06:26:55,579 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6969263948/log.48215263._004029.job.log.tgz.1 /tmp/boinchome/slots/0/log.48215263._004029.job
[2026-01-14 01:27:35] 2026-01-14 06:26:55,602 | INFO     | adding to output.list: log.48215263._004029.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7e/d6/log.48215263._004029.job.log.tg
[2026-01-14 01:27:35] 2026-01-14 06:26:55,603 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-14 01:27:35] 2026-01-14 06:26:55,603 | INFO     | summary of transferred files:
[2026-01-14 01:27:35] 2026-01-14 06:26:55,604 | INFO     |  -- lfn=log.48215263._004029.job.log.tgz.1, status_code=0, status=transferred
[2026-01-14 01:27:35] 2026-01-14 06:26:55,604 | INFO     | stage-out finished correctly
[2026-01-14 01:27:35] 2026-01-14 06:26:55,687 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-14 01:27:35] 2026-01-14 06:26:56,092 | INFO     | time since job start (2912s) is within the limit (349056.0s)
[2026-01-14 01:27:35] 2026-01-14 06:26:56,764 | INFO     | monitor loop #221: job 0:6969263948 is in state 'finished'
[2026-01-14 01:27:35] 2026-01-14 06:26:56,764 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 01:27:35] 2026-01-14 06:26:57,844 | INFO     | job 6969263948 has state=finished
[2026-01-14 01:27:35] 2026-01-14 06:26:57,845 | INFO     | preparing for final server update for job 6969263948 in state='finished'
[2026-01-14 01:27:35] 2026-01-14 06:26:57,845 | INFO     | this job has now completed (state=finished)
[2026-01-14 01:27:35] 2026-01-14 06:26:57,846 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-14 01:27:35] 2026-01-14 06:26:57,846 | INFO     | log transfer has been attempted: DONE
[2026-01-14 01:27:35] 2026-01-14 06:26:57,846 | INFO     | job 6969263948 has finished - writing final server update
[2026-01-14 01:27:35] 2026-01-14 06:26:57,846 | INFO     | total number of processed events: 400 (read)
[2026-01-14 01:27:35] 2026-01-14 06:26:57,847 | INFO     | executing command: lscpu
[2026-01-14 01:27:35] 2026-01-14 06:26:57,874 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-14 01:27:35] 2026-01-14 06:26:58,098 | INFO     | time since job start (2914s) is within the limit (349056.0s)
[2026-01-14 01:27:35] 2026-01-14 06:26:59,267 | INFO     | monitor loop #222: job 0:6969263948 is in state 'finished'
[2026-01-14 01:27:35] 2026-01-14 06:26:59,267 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 01:27:35] 2026-01-14 06:27:00,105 | INFO     | time since job start (2916s) is within the limit (349056.0s)
[2026-01-14 01:27:35] 2026-01-14 06:27:01,770 | INFO     | monitor loop #223: job 0:6969263948 is in state 'finished'
[2026-01-14 01:27:35] 2026-01-14 06:27:01,770 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 01:27:35] 2026-01-14 06:27:02,111 | INFO     | time since job start (2918s) is within the limit (349056.0s)
[2026-01-14 01:27:35] 2026-01-14 06:27:02,111 | INFO     | 2921s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-14 01:27:35] 2026-01-14 06:27:03,235 | INFO     | PID=5296 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-14 01:27:35] 2026-01-14 06:27:03,995 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-14 01:27:35] 2026-01-14 06:27:03,998 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.6666666666667
[2026-01-14 01:27:35] 2026-01-14 06:27:04,000 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6969263948/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 01:27:35] 2026-01-14 06:27:04,000 | INFO     | extracted standard info from prmon json
[2026-01-14 01:27:35] 2026-01-14 06:27:04,000 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 01:27:35] 2026-01-14 06:27:04,001 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 01:27:35] 2026-01-14 06:27:04,001 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 01:27:35] 2026-01-14 06:27:04,001 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 01:27:35] 2026-01-14 06:27:04,002 | INFO     | fitting pss+swap vs Time
[2026-01-14 01:27:35] 2026-01-14 06:27:04,002 | INFO     | sum of square deviations: 21358540.0
[2026-01-14 01:27:35] 2026-01-14 06:27:04,003 | INFO     | sum of deviations: -300770748.0000002
[2026-01-14 01:27:35] 2026-01-14 06:27:04,003 | INFO     | mean x: 1768370658.0
[2026-01-14 01:27:35] 2026-01-14 06:27:04,003 | INFO     | mean y: 2969211.2926829266
[2026-01-14 01:27:35] 2026-01-14 06:27:04,003 | INFO     | intersect: 24905147241.62212
[2026-01-14 01:27:35] 2026-01-14 06:27:04,003 | INFO     | chi2: 0.06796867372382184
[2026-01-14 01:27:35] 2026-01-14 06:27:04,003 | INFO     | current memory leak: -14.08 B/s (using 41 data points, chi2=0.07)
[2026-01-14 01:27:35] 2026-01-14 06:27:04,004 | INFO     | could have reported an average CPU frequency of 1904 MHz (5 samples)
[2026-01-14 01:27:35] 2026-01-14 06:27:04,004 | INFO     | ..............................
[2026-01-14 01:27:35] 2026-01-14 06:27:04,004 | INFO     | . Timing measurements:
[2026-01-14 01:27:35] 2026-01-14 06:27:04,004 | INFO     | . get job = 0 s
[2026-01-14 01:27:35] 2026-01-14 06:27:04,004 | INFO     | . initial setup = 2 s
[2026-01-14 01:27:35] 2026-01-14 06:27:04,004 | INFO     | . payload setup = 7 s
[2026-01-14 01:27:35] 2026-01-14 06:27:04,004 | INFO     | . stage-in = 0 s
[2026-01-14 01:27:35] 2026-01-14 06:27:04,004 | INFO     | . payload execution = 2882 s
[2026-01-14 01:27:35] 2026-01-14 06:27:04,005 | INFO     | . stage-out = 0 s
[2026-01-14 01:27:35] 2026-01-14 06:27:04,005 | INFO     | . log creation = 0 s
[2026-01-14 01:27:35] 2026-01-14 06:27:04,005 | INFO     | ..............................
[2026-01-14 01:27:35] 2026-01-14 06:27:04,085 | INFO     | 
[2026-01-14 01:27:35] 2026-01-14 06:27:04,085 | INFO     | job summary report
[2026-01-14 01:27:35] 2026-01-14 06:27:04,085 | INFO     | --------------------------------------------------
[2026-01-14 01:27:35] 2026-01-14 06:27:04,086 | INFO     | PanDA job id: 6969263948
[2026-01-14 01:27:35] 2026-01-14 06:27:04,086 | INFO     | task id: 48215263
[2026-01-14 01:27:35] 2026-01-14 06:27:04,086 | INFO     | errors: (none)
[2026-01-14 01:27:35] 2026-01-14 06:27:04,086 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 01:27:35] 2026-01-14 06:27:04,086 | INFO     | pilot state: finished 
[2026-01-14 01:27:35] 2026-01-14 06:27:04,086 | INFO     | transexitcode: 0
[2026-01-14 01:27:35] 2026-01-14 06:27:04,086 | INFO     | exeerrorcode: 0
[2026-01-14 01:27:35] 2026-01-14 06:27:04,087 | INFO     | exeerrordiag: 
[2026-01-14 01:27:35] 2026-01-14 06:27:04,087 | INFO     | exitcode: 0
[2026-01-14 01:27:35] 2026-01-14 06:27:04,087 | INFO     | exitmsg: OK
[2026-01-14 01:27:35] 2026-01-14 06:27:04,087 | INFO     | cpuconsumptiontime: 29667 s
[2026-01-14 01:27:35] 2026-01-14 06:27:04,087 | INFO     | nevents: 400
[2026-01-14 01:27:35] 2026-01-14 06:27:04,087 | INFO     | neventsw: 0
[2026-01-14 01:27:35] 2026-01-14 06:27:04,088 | INFO     | pid: 11654
[2026-01-14 01:27:35] 2026-01-14 06:27:04,088 | INFO     | pgrp: 11654
[2026-01-14 01:27:35] 2026-01-14 06:27:04,088 | INFO     | corecount: 12
[2026-01-14 01:27:35] 2026-01-14 06:27:04,088 | INFO     | event service: False
[2026-01-14 01:27:35] 2026-01-14 06:27:04,088 | INFO     | sizes: {0: 2283774, 1: 2283973, 6: 2284235, 11: 2284263, 2893: 2309530, 2896: 2318740, 2904: 2318910}
[2026-01-14 01:27:35] 2026-01-14 06:27:04,088 | INFO     | --------------------------------------------------
[2026-01-14 01:27:35] 2026-01-14 06:27:04,089 | INFO     | 
[2026-01-14 01:27:35] 2026-01-14 06:27:04,089 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-14 01:27:35] 2026-01-14 06:27:04,113 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 01:27:35] 2026-01-14 06:27:04,114 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 01:27:35] 2026-01-14 06:27:04,114 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 01:27:35] 2026-01-14 06:27:04,114 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 01:27:35] 2026-01-14 06:27:04,114 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 01:27:35] 2026-01-14 06:27:04,114 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 01:27:35] 2026-01-14 06:27:04,115 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 01:27:35] 2026-01-14 06:27:04,115 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 01:27:35] 2026-01-14 06:27:04,115 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 01:27:35] 2026-01-14 06:27:04,115 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 01:27:35] 2026-01-14 06:27:04,115 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 01:27:35] 2026-01-14 06:27:04,115 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 01:27:35] 2026-01-14 06:27:04,116 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 01:27:35] 2026-01-14 06:27:04,116 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 01:27:35] 2026-01-14 06:27:04,116 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 01:27:35] 2026-01-14 06:27:04,116 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 01:27:35] 2026-01-14 06:27:04,116 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 01:27:35] 2026-01-14 06:27:04,116 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 01:27:35] 2026-01-14 06:27:04,117 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 01:27:35] 2026-01-14 06:27:04,117 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 01:27:35] 2026-01-14 06:27:04,117 | INFO     | job 6969263948 has completed (purged errors)
[2026-01-14 01:27:35] 2026-01-14 06:27:04,117 | INFO     | overall cleanup function is called
[2026-01-14 01:27:35] 2026-01-14 06:27:05,125 | INFO     | --- collectZombieJob: --- 10, [11654]
[2026-01-14 01:27:35] 2026-01-14 06:27:05,125 | INFO     | zombie collector waiting for pid 11654
[2026-01-14 01:27:35] 2026-01-14 06:27:05,125 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 01:27:35] 2026-01-14 06:27:05,125 | INFO     | collected zombie processes
[2026-01-14 01:27:35] 2026-01-14 06:27:05,126 | INFO     | will attempt to kill all subprocesses of pid=11654
[2026-01-14 01:27:35] 2026-01-14 06:27:05,224 | INFO     | process IDs to be killed: [11654] (in reverse order)
[2026-01-14 01:27:35] 2026-01-14 06:27:05,279 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 01:27:35] 2026-01-14 06:27:05,279 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 01:27:35] 2026-01-14 06:27:05,283 | INFO     | did not find any defunct processes belonging to 11654
[2026-01-14 01:27:35] 2026-01-14 06:27:05,286 | INFO     | did not find any defunct processes belonging to 11654
[2026-01-14 01:27:35] 2026-01-14 06:27:05,287 | INFO     | ready for new job
[2026-01-14 01:27:35] 2026-01-14 06:27:05,287 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 01:27:35] 2026-01-14 06:27:05,288 | INFO     | ***************************************
[2026-01-14 01:27:35] 2026-01-14 06:27:05,288 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 01:27:35] 2026-01-14 06:27:05,288 | INFO     | ***************************************
[2026-01-14 01:27:35] 2026-01-14 06:27:05,288 | INFO     | 
[2026-01-14 01:27:35] 2026-01-14 06:27:05,289 | INFO     | architecture information:
[2026-01-14 01:27:35] 2026-01-14 06:27:05,289 | INFO     | executing command: cat /etc/os-release
[2026-01-14 01:27:35] 2026-01-14 06:27:05,306 | INFO     | cat /etc/os-release:
[2026-01-14 01:27:35] NAME="CentOS Linux"
[2026-01-14 01:27:35] VERSION="7 (Core)"
[2026-01-14 01:27:35] ID="centos"
[2026-01-14 01:27:35] ID_LIKE="rhel fedora"
[2026-01-14 01:27:35] VERSION_ID="7"
[2026-01-14 01:27:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 01:27:35] ANSI_COLOR="0;31"
[2026-01-14 01:27:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 01:27:35] HOME_URL="https://www.centos.org/"
[2026-01-14 01:27:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 01:27:35] 
[2026-01-14 01:27:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 01:27:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 01:27:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 01:27:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 01:27:35] 
[2026-01-14 01:27:35] 2026-01-14 06:27:05,306 | INFO     | ***************************************
[2026-01-14 01:27:35] 2026-01-14 06:27:05,808 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-14 01:27:35] 2026-01-14 06:27:05,825 | INFO     | sufficient remaining disk space (28631367680 B)
[2026-01-14 01:27:35] 2026-01-14 06:27:05,825 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 01:27:35] 2026-01-14 06:27:05,825 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 01:27:35] 2026-01-14 06:27:05,826 | INFO     | update_server=False
[2026-01-14 01:27:35] 2026-01-14 06:27:05,826 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 01:27:35] 2026-01-14 06:27:05,826 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 01:27:35] 2026-01-14 06:27:05,826 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 01:27:35] 2026-01-14 06:27:05,827 | INFO     | aborting loop
[2026-01-14 01:27:35] 2026-01-14 06:27:05,959 | INFO     | all payload control threads have been joined
[2026-01-14 01:27:35] 2026-01-14 06:27:06,199 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 01:27:35] 2026-01-14 06:27:06,275 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 01:27:35] 2026-01-14 06:27:06,829 | INFO     | [job] retrieve thread has finished
[2026-01-14 01:27:35] 2026-01-14 06:27:06,832 | INFO     | [job] queue monitor thread has finished
[2026-01-14 01:27:35] 2026-01-14 06:27:06,833 | INFO     | [job] job monitor thread has finished
[2026-01-14 01:27:35] 2026-01-14 06:27:06,895 | INFO     | all data control threads have been joined
[2026-01-14 01:27:35] 2026-01-14 06:27:06,933 | INFO     | [data] copytool_in thread has finished
[2026-01-14 01:27:35] 2026-01-14 06:27:06,965 | INFO     | [payload] control thread has finished
[2026-01-14 01:27:35] 2026-01-14 06:27:07,229 | INFO     | [payload] validate_post thread has finished
[2026-01-14 01:27:35] 2026-01-14 06:27:07,390 | INFO     | all job control threads have been joined
[2026-01-14 01:27:35] 2026-01-14 06:27:07,745 | INFO     | [job] validate thread has finished
[2026-01-14 01:27:35] 2026-01-14 06:27:07,848 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 01:27:35] 2026-01-14 06:27:07,901 | INFO     | [data] control thread has finished
[2026-01-14 01:27:35] 2026-01-14 06:27:07,901 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 01:27:35] 2026-01-14 06:27:07,982 | INFO     | [payload] failed_post thread has finished
[2026-01-14 01:27:35] 2026-01-14 06:27:08,195 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 01:27:35] 2026-01-14 06:27:08,205 | INFO     | [data] copytool_out thread has finished
[2026-01-14 01:27:35] 2026-01-14 06:27:08,262 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 01:27:35] 2026-01-14 06:27:08,395 | INFO     | [job] control thread has finished
[2026-01-14 01:27:35] 2026-01-14 06:27:10,281 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 01:27:35] 2026-01-14 06:27:28,064 | INFO     | [monitor] cgroup control has ended
[2026-01-14 01:27:35] 2026-01-14 06:27:29,283 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140485978466112)>', '<ExcThread(monitor, started 140484924126976)>']
[2026-01-14 01:27:35] 2026-01-14 06:27:34,308 | INFO     | all workflow threads have been joined
[2026-01-14 01:27:35] 2026-01-14 06:27:34,308 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 01:27:35] 2026-01-14 06:27:34,308 | INFO     | traces error code: 0
[2026-01-14 01:27:35] 2026-01-14 06:27:34,309 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 01:27:35] 2026-01-14 06:27:35,435 | INFO     | PID=5296 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-14 01:27:35] 2026-01-14 06:27:35,435 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 01:27:35] 2026-01-14 06:27:35,436 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 01:27:35] 2026-01-14 06:27:35,436 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 01:27:35] 2026-01-14 06:27:35,436 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 01:27:35] 2026-01-14 06:27:35,436 | INFO     | [monitor] control thread has ended
[2026-01-14 01:27:35] 2026-01-14 06:27:35,529 [wrapper] ==== pilot stdout END ====
[2026-01-14 01:27:35] 2026-01-14 06:27:35,533 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 01:27:35] 2026-01-14 06:27:35,537 [wrapper] pilotpid: 5296
[2026-01-14 01:27:35] 2026-01-14 06:27:35,541 [wrapper] Pilot exit status: 0
[2026-01-14 01:27:35] 2026-01-14 06:27:35,557 [wrapper] pandaids: 6969263948
[2026-01-14 01:27:35] 2026-01-14 06:27:35,598 [wrapper] cleanup supervisor_pilot 30728 5297
[2026-01-14 01:27:35] 2026-01-14 06:27:35,602 [wrapper] Test setup, not cleaning
[2026-01-14 01:27:35] 2026-01-14 06:27:35,606 [wrapper] apfmon messages muted
[2026-01-14 01:27:35] 2026-01-14 06:27:35,610 [wrapper] ==== wrapper stdout END ====
[2026-01-14 01:27:35] 2026-01-14 06:27:35,614 [wrapper] ==== wrapper stderr END ====
[2026-01-14 01:27:35]  *** Error codes and diagnostics ***
[2026-01-14 01:27:35]     "exeErrorCode": 0,
[2026-01-14 01:27:35]     "exeErrorDiag": "",
[2026-01-14 01:27:35]     "pilotErrorCode": 0,
[2026-01-14 01:27:35]     "pilotErrorDiag": "",
[2026-01-14 01:27:35]  *** Listing of results directory ***
[2026-01-14 01:27:35] total 736328
[2026-01-14 01:27:35] -rwx------ 1 boincer umatlas     36322 Jan 13 17:01 runpilot2-wrapper.sh
[2026-01-14 01:27:35] -rw-r--r-- 1 boincer umatlas    579449 Jan 13 17:12 pilot3.tar.gz
[2026-01-14 01:27:35] -rw-r--r-- 1 boincer umatlas      5112 Jan 13 17:20 queuedata.json
[2026-01-14 01:27:35] -rw-r--r-- 1 boincer umatlas       100 Jan 14 00:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 01:27:35] -rwxr-xr-x 1 boincer umatlas      7986 Jan 14 00:38 run_atlas
[2026-01-14 01:27:35] -rw-r--r-- 1 boincer umatlas       105 Jan 14 00:38 job.xml
[2026-01-14 01:27:35] -rw-r--r-- 2 boincer umatlas 597263426 Jan 14 00:38 EVNT.32794306._000162.pool.root.1
[2026-01-14 01:27:35] -rw-r--r-- 2 boincer umatlas     15847 Jan 14 00:38 start_atlas.sh
[2026-01-14 01:27:35] drwxrwx--x 2 boincer umatlas      4096 Jan 14 00:38 shared
[2026-01-14 01:27:35] -rw-r--r-- 2 boincer umatlas    592392 Jan 14 00:38 input.tar.gz
[2026-01-14 01:27:35] -rw-r--r-- 1 boincer umatlas         0 Jan 14 00:38 boinc_lockfile
[2026-01-14 01:27:35] -rw-r--r-- 1 boincer umatlas      2505 Jan 14 00:38 pandaJob.out
[2026-01-14 01:27:35] -rw------- 1 boincer umatlas        57 Jan 14 00:38 setup.sh.local
[2026-01-14 01:27:35] -rw------- 1 boincer umatlas    997226 Jan 14 00:38 agis_schedconf.cvmfs.json
[2026-01-14 01:27:35] -rw------- 1 boincer umatlas   1516246 Jan 14 00:38 agis_ddmendpoints.agis.ALL.json
[2026-01-14 01:27:35] drwx------ 5 boincer umatlas      4096 Jan 14 00:38 pilot3
[2026-01-14 01:27:35] -rw-r--r-- 1 boincer umatlas      5953 Jan 14 01:21 init_data.xml
[2026-01-14 01:27:35] -rw------- 1 boincer umatlas 151228553 Jan 14 01:26 HITS.48215263._004029.pool.root.1
[2026-01-14 01:27:35] -rw-r--r-- 1 boincer umatlas       530 Jan 14 01:26 boinc_task_state.xml
[2026-01-14 01:27:35] -rw------- 1 boincer umatlas      1046 Jan 14 01:26 memory_monitor_summary.json
[2026-01-14 01:27:35] -rw------- 1 boincer umatlas    349867 Jan 14 01:26 log.48215263._004029.job.log.tgz.1
[2026-01-14 01:27:35] -rw------- 1 boincer umatlas        95 Jan 14 01:26 pilot_heartbeat.json
[2026-01-14 01:27:35] -rw------- 1 boincer umatlas      7841 Jan 14 01:27 heartbeat.json
[2026-01-14 01:27:35] -rw-r--r-- 1 boincer umatlas      8192 Jan 14 01:27 boinc_mmap_file
[2026-01-14 01:27:35] -rw-r--r-- 1 boincer umatlas        27 Jan 14 01:27 wrapper_checkpoint.txt
[2026-01-14 01:27:35] -rw------- 1 boincer umatlas       744 Jan 14 01:27 pilotlog.txt
[2026-01-14 01:27:35] -rw------- 1 boincer umatlas    444002 Jan 14 01:27 log.48215263._004029.job.log.1
[2026-01-14 01:27:35] -rw------- 1 boincer umatlas       357 Jan 14 01:27 output.list
[2026-01-14 01:27:35] -rw-r--r-- 1 boincer umatlas       620 Jan 14 01:27 runtime_log
[2026-01-14 01:27:35] -rw------- 1 boincer umatlas    808960 Jan 14 01:27 result.tar.gz
[2026-01-14 01:27:35] -rw-r--r-- 1 boincer umatlas      9344 Jan 14 01:27 runtime_log.err
[2026-01-14 01:27:35] -rw------- 1 boincer umatlas       659 Jan 14 01:27 LIwKDmCd1z8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmV6oKDmyxCIen.diag
[2026-01-14 01:27:35] -rw-r--r-- 1 boincer umatlas     22047 Jan 14 01:27 stderr.txt
[2026-01-14 01:27:35] HITS file was successfully produced:
[2026-01-14 01:27:35] -rw------- 1 boincer umatlas 151228553 Jan 14 01:26 shared/HITS.pool.root.1
[2026-01-14 01:27:35]  *** Contents of shared directory: ***
[2026-01-14 01:27:35] total 732348
[2026-01-14 01:27:35] -rw-r--r-- 2 boincer umatlas 597263426 Jan 14 00:38 ATLAS.root_0
[2026-01-14 01:27:35] -rw-r--r-- 2 boincer umatlas     15847 Jan 14 00:38 start_atlas.sh
[2026-01-14 01:27:35] -rw-r--r-- 2 boincer umatlas    592392 Jan 14 00:38 input.tar.gz
[2026-01-14 01:27:35] -rw------- 1 boincer umatlas 151228553 Jan 14 01:26 HITS.pool.root.1
[2026-01-14 01:27:35] -rw------- 1 boincer umatlas    808960 Jan 14 01:27 result.tar.gz
01:27:37 (1468): run_atlas exited; CPU time 29589.973274
01:27:37 (1468): called boinc_finish(0)

</stderr_txt>
]]>

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