Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:06 (2201337): wrapper (7.7.26015): starting
00:02:06 (2201337): wrapper: running run_atlas (--nthreads 12)
[2026-01-14 00:02:06] Arguments: --nthreads 12
[2026-01-14 00:02:06] Threads: 12
[2026-01-14 00:02:06] Checking for CVMFS
[2026-01-14 00:02:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 00:02:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 00:02:08] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 00:02:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 00:02:10] 2.13.3.0 13071 36831 310940 155118 2 164 31221819 32935937 23707 16776704 0 36195980 99.731 31493993 14060 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-14 00:02:10] CVMFS is ok
[2026-01-14 00:02:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 00:02:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 00:02:10] Further information can be found at the LHC@home message board.
[2026-01-14 00:02:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 00:02:10] Checking for apptainer binary...
[2026-01-14 00:02:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 00:02:10] Running /usr/bin/apptainer --version
[2026-01-14 00:02:10] apptainer version 1.4.5-2.el9
[2026-01-14 00:02:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 00:02:12] c6-12-25-1.aglt2.org
[2026-01-14 00:02:12] apptainer works
[2026-01-14 00:02:12] Set ATHENA_PROC_NUMBER=12
[2026-01-14 00:02:12] Set ATHENA_CORE_NUMBER=12
[2026-01-14 00:02:12] Starting ATLAS job with PandaID=6969280102
[2026-01-14 00:02:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 13:20:51]  *** The last 200 lines of the pilot log: ***
[2026-01-14 13:20:51] 2026-01-14 18:04:59,775 | INFO     | extracted standard info from prmon json
[2026-01-14 13:20:51] 2026-01-14 18:04:59,775 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 13:20:51] 2026-01-14 18:04:59,775 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 13:20:51] 2026-01-14 18:04:59,799 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 13:20:51] 2026-01-14 18:04:59,799 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 13:20:51] 2026-01-14 18:05:00,026 | INFO     | fitting pss+swap vs Time
[2026-01-14 13:20:51] 2026-01-14 18:05:00,050 | INFO     | sum of square deviations: 137742701739.95276
[2026-01-14 13:20:51] 2026-01-14 18:05:00,181 | INFO     | time since job start (46852s) is within the limit (349056.0s)
[2026-01-14 13:20:51] 2026-01-14 18:05:00,278 | INFO     | sum of deviations: 743540654242.2843
[2026-01-14 13:20:51] 2026-01-14 18:05:00,278 | INFO     | mean x: 1768390521.9921362
[2026-01-14 13:20:51] 2026-01-14 18:05:00,279 | INFO     | mean y: 2663151.880733945
[2026-01-14 13:20:51] 2026-01-14 18:05:00,279 | INFO     | intersect: -9543180141.945883
[2026-01-14 13:20:51] 2026-01-14 18:05:00,297 | INFO     | chi2: 11.348360925792184
[2026-01-14 13:20:51] 2026-01-14 18:05:00,309 | INFO     | sum of square deviations: 135053105603.46678
[2026-01-14 13:20:51] 2026-01-14 18:05:00,541 | INFO     | sum of deviations: 1013488882428.6509
[2026-01-14 13:20:51] 2026-01-14 18:05:00,542 | INFO     | mean x: 1768390369.5065963
[2026-01-14 13:20:51] 2026-01-14 18:05:00,542 | INFO     | mean y: 2678458.6701846966
[2026-01-14 13:20:51] 2026-01-14 18:05:00,543 | INFO     | intersect: -13267982525.24741
[2026-01-14 13:20:51] 2026-01-14 18:05:00,558 | INFO     | chi2: 7.526088753929002
[2026-01-14 13:20:51] 2026-01-14 18:05:00,559 | INFO     | current chi2=7.526088753929002 (change=33.6812707743199 %)
[2026-01-14 13:20:51] 2026-01-14 18:05:00,583 | INFO     | sum of square deviations: 132398303947.95213
[2026-01-14 13:20:51] 2026-01-14 18:05:00,836 | INFO     | sum of deviations: 1004235421773.2627
[2026-01-14 13:20:51] 2026-01-14 18:05:00,836 | INFO     | mean x: 1768390217.0079682
[2026-01-14 13:20:51] 2026-01-14 18:05:00,837 | INFO     | mean y: 2677927.289508632
[2026-01-14 13:20:51] 2026-01-14 18:05:00,837 | INFO     | intersect: -13410485553.526945
[2026-01-14 13:20:51] 2026-01-14 18:05:00,839 | INFO     | chi2: 7.525541734418846
[2026-01-14 13:20:51] 2026-01-14 18:05:00,864 | INFO     | current chi2=7.525541734418846 (change=0.007268310646346979 %)
[2026-01-14 13:20:51] 2026-01-14 18:05:00,864 | INFO     | right removable region: 752
[2026-01-14 13:20:51] 2026-01-14 18:05:00,869 | INFO     | sum of square deviations: 135051899127.39331
[2026-01-14 13:20:51] 2026-01-14 18:05:01,058 | INFO     | sum of deviations: 477746585665.5598
[2026-01-14 13:20:51] 2026-01-14 18:05:01,058 | INFO     | mean x: 1768390674.5118732
[2026-01-14 13:20:51] 2026-01-14 18:05:01,059 | INFO     | mean y: 2678211.993403694
[2026-01-14 13:20:51] 2026-01-14 18:05:01,059 | INFO     | intersect: -6253010247.995826
[2026-01-14 13:20:51] 2026-01-14 18:05:01,061 | INFO     | chi2: 7.544386014208272
[2026-01-14 13:20:51] 2026-01-14 18:05:01,084 | INFO     | current chi2=7.544386014208272 (change=33.52003814875469 %)
[2026-01-14 13:20:51] 2026-01-14 18:05:01,106 | INFO     | sum of square deviations: 132396491840.41443
[2026-01-14 13:20:51] 2026-01-14 18:05:01,326 | INFO     | sum of deviations: 286691089601.2595
[2026-01-14 13:20:51] 2026-01-14 18:05:01,327 | INFO     | mean x: 1768390827.0278885
[2026-01-14 13:20:51] 2026-01-14 18:05:01,327 | INFO     | mean y: 2689181.892430279
[2026-01-14 13:20:51] 2026-01-14 18:05:01,327 | INFO     | intersect: -3826580657.4670143
[2026-01-14 13:20:51] 2026-01-14 18:05:01,359 | INFO     | chi2: 5.661071995462302
[2026-01-14 13:20:51] 2026-01-14 18:05:01,360 | INFO     | current chi2=5.661071995462302 (change=24.9631184724528 %)
[2026-01-14 13:20:51] 2026-01-14 18:05:01,360 | INFO     | left removable region: 20
[2026-01-14 13:20:51] 2026-01-14 18:05:01,370 | INFO     | sum of square deviations: 121625473410.40318
[2026-01-14 13:20:51] 2026-01-14 18:05:01,540 | INFO     | sum of deviations: 339407469477.49194
[2026-01-14 13:20:51] 2026-01-14 18:05:01,540 | INFO     | mean x: 1768390796.579235
[2026-01-14 13:20:51] 2026-01-14 18:05:01,541 | INFO     | mean y: 2717069.6639344264
[2026-01-14 13:20:51] 2026-01-14 18:05:01,541 | INFO     | intersect: -4932145903.39896
[2026-01-14 13:20:51] 2026-01-14 18:05:01,544 | INFO     | chi2: 0.6478034072589635
[2026-01-14 13:20:51] 2026-01-14 18:05:01,545 | INFO     | current memory leak: 2.79 B/s (using 732 data points, chi2=0.65)
[2026-01-14 13:20:51] 2026-01-14 18:05:01,547 | INFO     | could have reported an average CPU frequency of 999 MHz (29 samples)
[2026-01-14 13:20:51] 2026-01-14 18:05:01,548 | INFO     | ..............................
[2026-01-14 13:20:51] 2026-01-14 18:05:01,548 | INFO     | . Timing measurements:
[2026-01-14 13:20:51] 2026-01-14 18:05:01,548 | INFO     | . get job = 1 s
[2026-01-14 13:20:51] 2026-01-14 18:05:01,548 | INFO     | . initial setup = 11 s
[2026-01-14 13:20:51] 2026-01-14 18:05:01,549 | INFO     | . payload setup = 68 s
[2026-01-14 13:20:51] 2026-01-14 18:05:01,549 | INFO     | . stage-in = 0 s
[2026-01-14 13:20:51] 2026-01-14 18:05:01,549 | INFO     | . payload execution = 46586 s
[2026-01-14 13:20:51] 2026-01-14 18:05:01,549 | INFO     | . stage-out = 14 s
[2026-01-14 13:20:51] 2026-01-14 18:05:01,549 | INFO     | . log creation = 2 s
[2026-01-14 13:20:51] 2026-01-14 18:05:01,550 | INFO     | ..............................
[2026-01-14 13:20:51] 2026-01-14 18:05:02,064 | INFO     | 
[2026-01-14 13:20:51] 2026-01-14 18:05:02,064 | INFO     | job summary report
[2026-01-14 13:20:51] 2026-01-14 18:05:02,065 | INFO     | --------------------------------------------------
[2026-01-14 13:20:51] 2026-01-14 18:05:02,065 | INFO     | PanDA job id: 6969280102
[2026-01-14 13:20:51] 2026-01-14 18:05:02,065 | INFO     | task id: 48215263
[2026-01-14 13:20:51] 2026-01-14 18:05:02,065 | INFO     | errors: (none)
[2026-01-14 13:20:51] 2026-01-14 18:05:02,065 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 13:20:51] 2026-01-14 18:05:02,066 | INFO     | pilot state: finished 
[2026-01-14 13:20:51] 2026-01-14 18:05:02,066 | INFO     | transexitcode: 0
[2026-01-14 13:20:51] 2026-01-14 18:05:02,066 | INFO     | exeerrorcode: 0
[2026-01-14 13:20:51] 2026-01-14 18:05:02,066 | INFO     | exeerrordiag: 
[2026-01-14 13:20:51] 2026-01-14 18:05:02,066 | INFO     | exitcode: 0
[2026-01-14 13:20:51] 2026-01-14 18:05:02,067 | INFO     | exitmsg: OK
[2026-01-14 13:20:51] 2026-01-14 18:05:02,067 | INFO     | cpuconsumptiontime: 72097 s
[2026-01-14 13:20:51] 2026-01-14 18:05:02,067 | INFO     | nevents: 400
[2026-01-14 13:20:51] 2026-01-14 18:05:02,067 | INFO     | neventsw: 0
[2026-01-14 13:20:51] 2026-01-14 18:05:02,067 | INFO     | pid: 2243673
[2026-01-14 13:20:51] 2026-01-14 18:05:02,090 | INFO     | pgrp: 2243673
[2026-01-14 13:20:51] 2026-01-14 18:05:02,090 | INFO     | corecount: 12
[2026-01-14 13:20:51] 2026-01-14 18:05:02,090 | INFO     | event service: False
[2026-01-14 13:20:51] 2026-01-14 18:05:02,091 | INFO     | sizes: {0: 2283121, 1: 2283722, 2: 2283806, 3: 2283862, 4: 2283862, 5: 2284217, 17: 2284217, 28: 2284245, 40: 2284273, 52: 2284503, 55: 2284591, 64: 2284899, 46661
[2026-01-14 13:20:51] 2026-01-14 18:05:02,091 | INFO     | --------------------------------------------------
[2026-01-14 13:20:51] 2026-01-14 18:05:02,091 | INFO     | 
[2026-01-14 13:20:51] 2026-01-14 18:05:02,091 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2026-01-14 13:20:51] 2026-01-14 18:05:02,211 | INFO     | time since job start (46854s) is within the limit (349056.0s)
[2026-01-14 13:20:51] 2026-01-14 18:05:02,296 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 13:20:51] 2026-01-14 18:05:02,297 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 13:20:51] 2026-01-14 18:05:02,297 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 13:20:51] 2026-01-14 18:05:02,297 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 13:20:51] 2026-01-14 18:05:02,297 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 13:20:51] 2026-01-14 18:05:02,297 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 13:20:51] 2026-01-14 18:05:02,298 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 13:20:51] 2026-01-14 18:05:02,298 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 13:20:51] 2026-01-14 18:05:02,298 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 13:20:51] 2026-01-14 18:05:02,298 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 13:20:51] 2026-01-14 18:05:02,298 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 13:20:51] 2026-01-14 18:05:02,299 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 13:20:51] 2026-01-14 18:05:02,299 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 13:20:51] 2026-01-14 18:05:02,299 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 13:20:51] 2026-01-14 18:05:02,299 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 13:20:51] 2026-01-14 18:05:02,299 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 13:20:51] 2026-01-14 18:05:02,303 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 13:20:51] 2026-01-14 18:05:02,303 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 13:20:51] 2026-01-14 18:05:02,303 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 13:20:51] 2026-01-14 18:05:02,304 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 13:20:51] 2026-01-14 18:05:02,304 | INFO     | job 6969280102 has completed (purged errors)
[2026-01-14 13:20:51] 2026-01-14 18:05:02,304 | INFO     | overall cleanup function is called
[2026-01-14 13:20:51] 2026-01-14 18:05:03,369 | INFO     | --- collectZombieJob: --- 10, [2243673]
[2026-01-14 13:20:51] 2026-01-14 18:05:03,370 | INFO     | zombie collector waiting for pid 2243673
[2026-01-14 13:20:51] 2026-01-14 18:05:03,370 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 13:20:51] 2026-01-14 18:05:03,370 | INFO     | collected zombie processes
[2026-01-14 13:20:51] 2026-01-14 18:05:03,371 | INFO     | will attempt to kill all subprocesses of pid=2243673
[2026-01-14 13:20:51] 2026-01-14 18:05:15,370 | INFO     | process IDs to be killed: [2243673] (in reverse order)
[2026-01-14 13:20:51] 2026-01-14 18:05:15,855 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 13:20:51] 2026-01-14 18:05:15,856 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 13:20:51] 2026-01-14 18:05:16,506 | INFO     | did not find any defunct processes belonging to 2243673
[2026-01-14 13:20:51] 2026-01-14 18:05:16,609 | INFO     | did not find any defunct processes belonging to 2243673
[2026-01-14 13:20:51] 2026-01-14 18:05:16,610 | INFO     | ready for new job
[2026-01-14 13:20:51] 2026-01-14 18:05:16,610 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 13:20:51] 2026-01-14 18:05:16,630 | INFO     | ***************************************
[2026-01-14 13:20:51] 2026-01-14 18:05:16,630 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 13:20:51] 2026-01-14 18:05:16,630 | INFO     | ***************************************
[2026-01-14 13:20:51] 2026-01-14 18:05:16,631 | INFO     | 
[2026-01-14 13:20:51] 2026-01-14 18:05:16,658 | INFO     | architecture information:
[2026-01-14 13:20:51] 2026-01-14 18:05:16,659 | INFO     | executing command: cat /etc/os-release
[2026-01-14 13:20:51] 2026-01-14 18:05:16,800 | INFO     | cat /etc/os-release:
[2026-01-14 13:20:51] NAME="CentOS Linux"
[2026-01-14 13:20:51] VERSION="7 (Core)"
[2026-01-14 13:20:51] ID="centos"
[2026-01-14 13:20:51] ID_LIKE="rhel fedora"
[2026-01-14 13:20:51] VERSION_ID="7"
[2026-01-14 13:20:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 13:20:51] ANSI_COLOR="0;31"
[2026-01-14 13:20:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 13:20:51] HOME_URL="https://www.centos.org/"
[2026-01-14 13:20:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 13:20:51] 
[2026-01-14 13:20:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 13:20:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 13:20:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 13:20:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 13:20:51] 
[2026-01-14 13:20:51] 2026-01-14 18:05:16,801 | INFO     | ***************************************
[2026-01-14 13:20:51] 2026-01-14 18:05:16,924 | INFO     | PID=2212154 has CPU usage=11.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-14 13:20:51] 2026-01-14 18:05:16,924 | INFO     | .. there are 39 such processes running
[2026-01-14 13:20:51] 2026-01-14 18:05:17,305 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2026-01-14 13:20:51] 2026-01-14 18:05:17,498 | INFO     | sufficient remaining disk space (68176314368 B)
[2026-01-14 13:20:51] 2026-01-14 18:05:17,498 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 13:20:51] 2026-01-14 18:05:17,499 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 13:20:51] 2026-01-14 18:05:17,499 | INFO     | update_server=False
[2026-01-14 13:20:51] 2026-01-14 18:05:17,499 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 13:20:51] 2026-01-14 18:05:17,500 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-14 13:20:51] 2026-01-14 18:05:17,500 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 13:20:51] 2026-01-14 18:05:17,500 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 13:20:51] 2026-01-14 18:05:17,501 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 13:20:51] 2026-01-14 18:05:17,589 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-14 13:20:51] 2026-01-14 18:05:17,590 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-14 13:20:51] 2026-01-14 18:05:17,590 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 13:20:51] 2026-01-14 18:05:17,590 | INFO     | will abort loop
[2026-01-14 13:20:51] 2026-01-14 18:05:18,424 | INFO     | all data control threads have been joined
[2026-01-14 13:20:51] 2026-01-14 18:05:18,504 | INFO     | [job] retrieve thread has finished
[2026-01-14 13:20:51] 2026-01-14 18:05:18,599 | INFO     | [job] job monitor thread has finished
[2026-01-14 13:20:51] 2026-01-14 18:05:18,790 | INFO     | [payload] validate_post thread has finished
[2026-01-14 13:20:51] 2026-01-14 18:05:18,801 | INFO     | [payload] failed_post thread has finished
[2026-01-14 13:20:51] 2026-01-14 18:05:18,839 | INFO     | all job control threads have been joined
[2026-01-14 13:20:51] 2026-01-14 18:05:18,850 | INFO     | all payload control threads have been joined
[2026-01-14 13:20:51] 2026-01-14 18:05:18,883 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 13:20:51] 2026-01-14 18:05:19,351 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 13:20:51] 2026-01-14 18:05:19,440 | INFO     | [data] control thread has finished
[2026-01-14 13:20:51] 2026-01-14 18:05:19,588 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 13:20:51] 2026-01-14 18:05:19,594 | INFO     | [data] copytool_in thread has finished
[2026-01-14 13:20:51] 2026-01-14 18:05:19,601 | INFO     | [job] validate thread has finished
[2026-01-14 13:20:51] 2026-01-14 18:05:19,607 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 13:20:51] 2026-01-14 18:05:19,612 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 13:20:51] 2026-01-14 18:05:19,657 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 13:20:51] 2026-01-14 18:05:19,851 | INFO     | [job] control thread has finished
[2026-01-14 13:20:51] 2026-01-14 18:05:19,857 | INFO     | [payload] control thread has finished
[2026-01-14 13:20:51] 2026-01-14 18:05:20,356 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 13:20:51] 2026-01-14 18:05:20,357 | INFO     | [job] queue monitor thread has finished
[2026-01-14 13:20:51] 2026-01-14 18:05:20,891 | INFO     | [data] copytool_out thread has finished
[2026-01-14 13:20:51] 2026-01-14 18:05:24,390 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 13:20:51] 2026-01-14 18:05:46,898 | INFO     | [monitor] cgroup control has ended
[2026-01-14 13:20:51] 2026-01-14 18:05:48,318 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140462602291008)>', '<ExcThread(monitor, started 140462258116352)>']
[2026-01-14 13:20:51] 2026-01-14 18:05:48,786 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 13:20:51] 2026-01-14 18:05:48,786 | INFO     | [monitor] control thread has ended
[2026-01-14 13:20:51] 2026-01-14 18:05:53,344 | INFO     | all workflow threads have been joined
[2026-01-14 13:20:51] 2026-01-14 18:05:53,344 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 13:20:51] 2026-01-14 18:05:53,345 | INFO     | traces error code: 0
[2026-01-14 13:20:51] 2026-01-14 18:05:53,345 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 13:20:51] 2026-01-14 18:05:53,728 [wrapper] ==== pilot stdout END ====
[2026-01-14 13:20:51] 2026-01-14 18:05:53,740 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 13:20:51] 2026-01-14 18:05:53,745 [wrapper] pilotpid: 2212154
[2026-01-14 13:20:51] 2026-01-14 18:05:53,750 [wrapper] Pilot exit status: 0
[2026-01-14 13:20:51] 2026-01-14 18:05:53,806 [wrapper] pandaids: 6969280102
[2026-01-14 13:20:51] 2026-01-14 18:05:54,066 [wrapper] cleanup supervisor_pilot  642254 2212155
[2026-01-14 13:20:51] 2026-01-14 18:05:54,100 [wrapper] Test setup, not cleaning
[2026-01-14 13:20:51] 2026-01-14 18:05:54,129 [wrapper] apfmon messages muted
[2026-01-14 13:20:51] 2026-01-14 18:05:54,135 [wrapper] ==== wrapper stdout END ====
[2026-01-14 13:20:51] 2026-01-14 18:05:54,140 [wrapper] ==== wrapper stderr END ====
[2026-01-14 13:20:51]  *** Error codes and diagnostics ***
[2026-01-14 13:20:51]     "exeErrorCode": 0,
[2026-01-14 13:20:51]     "exeErrorDiag": "",
[2026-01-14 13:20:51]     "pilotErrorCode": 0,
[2026-01-14 13:20:51]     "pilotErrorDiag": "",
[2026-01-14 13:20:51]  *** Listing of results directory ***
[2026-01-14 13:20:51] total 742084
[2026-01-14 13:20:51] -rw-r--r--. 1 boincer umatlas    579449 Jan 13 20:50 pilot3.tar.gz
[2026-01-14 13:20:51] -rwx------. 1 boincer umatlas     36322 Jan 13 20:51 runpilot2-wrapper.sh
[2026-01-14 13:20:51] -rw-r--r--. 1 boincer umatlas      5112 Jan 13 20:54 queuedata.json
[2026-01-14 13:20:51] -rw-r--r--. 1 boincer umatlas       100 Jan 14 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 13:20:51] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 14 00:02 run_atlas
[2026-01-14 13:20:51] -rw-r--r--. 1 boincer umatlas       105 Jan 14 00:02 job.xml
[2026-01-14 13:20:51] -rw-r--r--. 2 boincer umatlas 595548855 Jan 14 00:02 EVNT.32794306._000441.pool.root.1
[2026-01-14 13:20:51] -rw-r--r--. 2 boincer umatlas     15847 Jan 14 00:02 start_atlas.sh
[2026-01-14 13:20:51] drwxrwx--x. 2 boincer umatlas      4096 Jan 14 00:02 shared
[2026-01-14 13:20:51] -rw-r--r--. 2 boincer umatlas    592399 Jan 14 00:02 input.tar.gz
[2026-01-14 13:20:51] -rw-r--r--. 1 boincer umatlas         0 Jan 14 00:02 boinc_lockfile
[2026-01-14 13:20:51] -rw-r--r--. 1 boincer umatlas      2507 Jan 14 00:02 pandaJob.out
[2026-01-14 13:20:51] -rw-------. 1 boincer umatlas        57 Jan 14 00:02 setup.sh.local
[2026-01-14 13:20:51] -rw-------. 1 boincer umatlas    997226 Jan 14 00:03 agis_schedconf.cvmfs.json
[2026-01-14 13:20:51] drwx------. 5 boincer umatlas      4096 Jan 14 00:04 pilot3
[2026-01-14 13:20:51] -rw-------. 1 boincer umatlas 150880219 Jan 14 12:57 HITS.48215263._011018.pool.root.1
[2026-01-14 13:20:51] -rw-r--r--. 1 boincer umatlas       532 Jan 14 12:58 boinc_task_state.xml
[2026-01-14 13:20:51] -rw-------. 1 boincer umatlas      1042 Jan 14 13:03 memory_monitor_summary.json
[2026-01-14 13:20:51] -rw-------. 1 boincer umatlas   1516246 Jan 14 13:03 agis_ddmendpoints.agis.ALL.json
[2026-01-14 13:20:51] -rw-------. 1 boincer umatlas    814842 Jan 14 13:03 log.48215263._011018.job.log.tgz.1
[2026-01-14 13:20:51] -rw-------. 1 boincer umatlas        96 Jan 14 13:04 pilot_heartbeat.json
[2026-01-14 13:20:51] -rw-------. 1 boincer umatlas      7834 Jan 14 13:05 heartbeat.json
[2026-01-14 13:20:51] -rw-------. 1 boincer umatlas      5134 Jan 14 13:05 pilotlog.txt
[2026-01-14 13:20:51] -rw-------. 1 boincer umatlas   3955115 Jan 14 13:05 log.48215263._011018.job.log.1
[2026-01-14 13:20:51] -rw-------. 1 boincer umatlas       357 Jan 14 13:05 output.list
[2026-01-14 13:20:51] -rw-r--r--. 1 boincer umatlas       620 Jan 14 13:05 runtime_log
[2026-01-14 13:20:51] -rw-------. 1 boincer umatlas   4792320 Jan 14 13:05 result.tar.gz
[2026-01-14 13:20:51] -rw-------. 1 boincer umatlas       660 Jan 14 13:05 RmIKDmsD5z8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmBUjKDm0XOUwn.diag
[2026-01-14 13:20:51] -rw-r--r--. 1 boincer umatlas      9355 Jan 14 13:05 runtime_log.err
[2026-01-14 13:20:51] -rw-r--r--. 1 boincer umatlas      6858 Jan 14 13:20 init_data.xml
[2026-01-14 13:20:51] -rw-r--r--. 1 boincer umatlas      8192 Jan 14 13:20 boinc_mmap_file
[2026-01-14 13:20:51] -rw-r--r--. 1 boincer umatlas        27 Jan 14 13:20 wrapper_checkpoint.txt
[2026-01-14 13:20:51] -rw-r--r--. 1 boincer umatlas     21211 Jan 14 13:20 stderr.txt
[2026-01-14 13:20:51] HITS file was successfully produced:
[2026-01-14 13:20:51] -rw-------. 1 boincer umatlas 150880219 Jan 14 12:57 shared/HITS.pool.root.1
[2026-01-14 13:20:51]  *** Contents of shared directory: ***
[2026-01-14 13:20:51] total 734220
[2026-01-14 13:20:51] -rw-r--r--. 2 boincer umatlas 595548855 Jan 14 00:02 ATLAS.root_0
[2026-01-14 13:20:51] -rw-r--r--. 2 boincer umatlas     15847 Jan 14 00:02 start_atlas.sh
[2026-01-14 13:20:51] -rw-r--r--. 2 boincer umatlas    592399 Jan 14 00:02 input.tar.gz
[2026-01-14 13:20:51] -rw-------. 1 boincer umatlas 150880219 Jan 14 12:57 HITS.pool.root.1
[2026-01-14 13:20:51] -rw-------. 1 boincer umatlas   4792320 Jan 14 13:05 result.tar.gz
13:20:53 (2201337): run_atlas exited; CPU time 75563.477221
13:20:53 (2201337): called boinc_finish(0)

</stderr_txt>
]]>

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