Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:12:06 (1748874): wrapper (7.7.26015): starting
02:12:06 (1748874): wrapper: running run_atlas (--nthreads 8)
[2026-01-14 02:12:06] Arguments: --nthreads 8
[2026-01-14 02:12:06] Threads: 8
[2026-01-14 02:12:06] Checking for CVMFS
[2026-01-14 02:12:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 02:12:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 02:12:06] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 02:12:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 02:12:06] 2.13.3.0 44796 100153 374196 155122 2 167 32690882 32947201 21384 16776704 0 328913999 99.473 467814093 34358 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-14 02:12:06] CVMFS is ok
[2026-01-14 02:12:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 02:12:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 02:12:06] Further information can be found at the LHC@home message board.
[2026-01-14 02:12:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 02:12:06] Checking for apptainer binary...
[2026-01-14 02:12:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 02:12:06] Running /usr/bin/apptainer --version
[2026-01-14 02:12:06] apptainer version 1.4.5-2.el9
[2026-01-14 02:12:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 02:12:07] c6-6-8-2.aglt2.org
[2026-01-14 02:12:07] apptainer works
[2026-01-14 02:12:07] Set ATHENA_PROC_NUMBER=8
[2026-01-14 02:12:07] Set ATHENA_CORE_NUMBER=8
[2026-01-14 02:12:07] Starting ATLAS job with PandaID=6969262136
[2026-01-14 02:12:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 03:41:39]  *** The last 200 lines of the pilot log: ***
[2026-01-14 03:41:39] 2026-01-14 08:40:07,549 | INFO     | monitor loop #345: job 0:6969262136 is in state 'finished'
[2026-01-14 03:41:39] 2026-01-14 08:40:07,550 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 03:41:39] 2026-01-14 08:40:07,785 | INFO     | time since job start (5264s) is within the limit (349056.0s)
[2026-01-14 03:41:39] 2026-01-14 08:40:09,798 | INFO     | time since job start (5266s) is within the limit (349056.0s)
[2026-01-14 03:41:39] 2026-01-14 08:40:10,055 | INFO     | monitor loop #346: job 0:6969262136 is in state 'finished'
[2026-01-14 03:41:39] 2026-01-14 08:40:10,056 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 03:41:39] 2026-01-14 08:40:11,818 | INFO     | time since job start (5268s) is within the limit (349056.0s)
[2026-01-14 03:41:39] 2026-01-14 08:40:12,561 | INFO     | monitor loop #347: job 0:6969262136 is in state 'finished'
[2026-01-14 03:41:39] 2026-01-14 08:40:12,562 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 03:41:39] 2026-01-14 08:40:13,826 | INFO     | time since job start (5270s) is within the limit (349056.0s)
[2026-01-14 03:41:39] 2026-01-14 08:40:15,066 | INFO     | monitor loop #348: job 0:6969262136 is in state 'finished'
[2026-01-14 03:41:39] 2026-01-14 08:40:15,067 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 03:41:39] 2026-01-14 08:40:15,832 | INFO     | time since job start (5272s) is within the limit (349056.0s)
[2026-01-14 03:41:39] 2026-01-14 08:40:17,571 | INFO     | monitor loop #349: job 0:6969262136 is in state 'finished'
[2026-01-14 03:41:39] 2026-01-14 08:40:17,572 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 03:41:39] 2026-01-14 08:40:17,839 | INFO     | time since job start (5274s) is within the limit (349056.0s)
[2026-01-14 03:41:39] 2026-01-14 08:40:19,848 | INFO     | time since job start (5276s) is within the limit (349056.0s)
[2026-01-14 03:41:39] 2026-01-14 08:40:20,088 | INFO     | monitor loop #350: job 0:6969262136 is in state 'finished'
[2026-01-14 03:41:39] 2026-01-14 08:40:20,088 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 03:41:39] 2026-01-14 08:40:21,855 | INFO     | time since job start (5278s) is within the limit (349056.0s)
[2026-01-14 03:41:39] 2026-01-14 08:40:22,593 | INFO     | monitor loop #351: job 0:6969262136 is in state 'finished'
[2026-01-14 03:41:39] 2026-01-14 08:40:22,594 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 03:41:39] 2026-01-14 08:40:23,861 | INFO     | time since job start (5280s) is within the limit (349056.0s)
[2026-01-14 03:41:39] 2026-01-14 08:40:25,102 | INFO     | monitor loop #352: job 0:6969262136 is in state 'finished'
[2026-01-14 03:41:39] 2026-01-14 08:40:25,103 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 03:41:39] 2026-01-14 08:40:25,871 | INFO     | time since job start (5282s) is within the limit (349056.0s)
[2026-01-14 03:41:39] 2026-01-14 08:40:27,620 | INFO     | monitor loop #353: job 0:6969262136 is in state 'finished'
[2026-01-14 03:41:39] 2026-01-14 08:40:27,621 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 03:41:39] 2026-01-14 08:40:27,879 | INFO     | time since job start (5284s) is within the limit (349056.0s)
[2026-01-14 03:41:39] 2026-01-14 08:40:30,166 | INFO     | monitor loop #354: job 0:6969262136 is in state 'finished'
[2026-01-14 03:41:39] 2026-01-14 08:40:30,167 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 03:41:39] 2026-01-14 08:40:32,699 | INFO     | monitor loop #355: job 0:6969262136 is in state 'finished'
[2026-01-14 03:41:39] 2026-01-14 08:40:32,700 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 03:41:39] 2026-01-14 08:40:33,129 | INFO     | PID=1752610 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-14 03:41:39] 2026-01-14 08:40:33,129 | INFO     | .. there are 24 such processes running
[2026-01-14 03:41:39] 2026-01-14 08:40:34,130 | INFO     | time since job start (5291s) is within the limit (349056.0s)
[2026-01-14 03:41:39] 2026-01-14 08:40:35,164 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-14 03:41:39] 2026-01-14 08:40:35,204 | INFO     | monitor loop #356: job 0:6969262136 is in state 'finished'
[2026-01-14 03:41:39] 2026-01-14 08:40:35,205 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 03:41:39] 2026-01-14 08:40:35,212 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2649.998802083334
[2026-01-14 03:41:39] 2026-01-14 08:40:35,341 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6969262136/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 03:41:39] 2026-01-14 08:40:35,342 | INFO     | extracted standard info from prmon json
[2026-01-14 03:41:39] 2026-01-14 08:40:35,342 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 03:41:39] 2026-01-14 08:40:35,342 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 03:41:39] 2026-01-14 08:40:35,343 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 03:41:39] 2026-01-14 08:40:35,343 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 03:41:39] 2026-01-14 08:40:35,364 | INFO     | fitting pss+swap vs Time
[2026-01-14 03:41:39] 2026-01-14 08:40:35,364 | INFO     | sum of square deviations: 152855020.98734194
[2026-01-14 03:41:39] 2026-01-14 08:40:35,365 | INFO     | sum of deviations: -3251278339.493671
[2026-01-14 03:41:39] 2026-01-14 08:40:35,365 | INFO     | mean x: 1768377460.012658
[2026-01-14 03:41:39] 2026-01-14 08:40:35,365 | INFO     | mean y: 2639429.493670886
[2026-01-14 03:41:39] 2026-01-14 08:40:35,365 | INFO     | intersect: 37616630089.729225
[2026-01-14 03:41:39] 2026-01-14 08:40:35,365 | INFO     | chi2: 0.018852257860663243
[2026-01-14 03:41:39] 2026-01-14 08:40:35,365 | INFO     | current memory leak: -21.27 B/s (using 79 data points, chi2=0.02)
[2026-01-14 03:41:39] 2026-01-14 08:40:35,366 | INFO     | could have reported an average CPU frequency of 2647 MHz (6 samples)
[2026-01-14 03:41:39] 2026-01-14 08:40:35,366 | INFO     | ..............................
[2026-01-14 03:41:39] 2026-01-14 08:40:35,366 | INFO     | . Timing measurements:
[2026-01-14 03:41:39] 2026-01-14 08:40:35,366 | INFO     | . get job = 0 s
[2026-01-14 03:41:39] 2026-01-14 08:40:35,392 | INFO     | . initial setup = 2 s
[2026-01-14 03:41:39] 2026-01-14 08:40:35,393 | INFO     | . payload setup = 9 s
[2026-01-14 03:41:39] 2026-01-14 08:40:35,393 | INFO     | . stage-in = 0 s
[2026-01-14 03:41:39] 2026-01-14 08:40:35,393 | INFO     | . payload execution = 5225 s
[2026-01-14 03:41:39] 2026-01-14 08:40:35,393 | INFO     | . stage-out = 3 s
[2026-01-14 03:41:39] 2026-01-14 08:40:35,393 | INFO     | . log creation = 0 s
[2026-01-14 03:41:39] 2026-01-14 08:40:35,393 | INFO     | ..............................
[2026-01-14 03:41:39] 2026-01-14 08:40:35,839 | INFO     | 
[2026-01-14 03:41:39] 2026-01-14 08:40:35,840 | INFO     | job summary report
[2026-01-14 03:41:39] 2026-01-14 08:40:35,840 | INFO     | --------------------------------------------------
[2026-01-14 03:41:39] 2026-01-14 08:40:35,840 | INFO     | PanDA job id: 6969262136
[2026-01-14 03:41:39] 2026-01-14 08:40:35,840 | INFO     | task id: 48215263
[2026-01-14 03:41:39] 2026-01-14 08:40:35,840 | INFO     | errors: (none)
[2026-01-14 03:41:39] 2026-01-14 08:40:35,840 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 03:41:39] 2026-01-14 08:40:35,840 | INFO     | pilot state: finished 
[2026-01-14 03:41:39] 2026-01-14 08:40:35,840 | INFO     | transexitcode: 0
[2026-01-14 03:41:39] 2026-01-14 08:40:35,840 | INFO     | exeerrorcode: 0
[2026-01-14 03:41:39] 2026-01-14 08:40:35,840 | INFO     | exeerrordiag: 
[2026-01-14 03:41:39] 2026-01-14 08:40:35,840 | INFO     | exitcode: 0
[2026-01-14 03:41:39] 2026-01-14 08:40:35,841 | INFO     | exitmsg: OK
[2026-01-14 03:41:39] 2026-01-14 08:40:35,841 | INFO     | cpuconsumptiontime: 27822 s
[2026-01-14 03:41:39] 2026-01-14 08:40:35,841 | INFO     | nevents: 400
[2026-01-14 03:41:39] 2026-01-14 08:40:35,841 | INFO     | neventsw: 0
[2026-01-14 03:41:39] 2026-01-14 08:40:35,841 | INFO     | pid: 1759700
[2026-01-14 03:41:39] 2026-01-14 08:40:35,841 | INFO     | pgrp: 1759700
[2026-01-14 03:41:39] 2026-01-14 08:40:35,841 | INFO     | corecount: 8
[2026-01-14 03:41:39] 2026-01-14 08:40:35,841 | INFO     | event service: False
[2026-01-14 03:41:39] 2026-01-14 08:40:35,841 | INFO     | sizes: {0: 2283774, 1: 2283973, 7: 2284235, 12: 2284263, 5238: 2310682, 5239: 2310681, 5243: 2319863, 5245: 2319919, 5276: 2320113}
[2026-01-14 03:41:39] 2026-01-14 08:40:35,841 | INFO     | --------------------------------------------------
[2026-01-14 03:41:39] 2026-01-14 08:40:35,841 | INFO     | 
[2026-01-14 03:41:39] 2026-01-14 08:40:35,841 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-14 03:41:39] 2026-01-14 08:40:35,932 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 03:41:39] 2026-01-14 08:40:35,932 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 03:41:39] 2026-01-14 08:40:35,932 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 03:41:39] 2026-01-14 08:40:35,932 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 03:41:39] 2026-01-14 08:40:35,932 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 03:41:39] 2026-01-14 08:40:35,932 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 03:41:39] 2026-01-14 08:40:35,932 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 03:41:39] 2026-01-14 08:40:35,933 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 03:41:39] 2026-01-14 08:40:35,933 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 03:41:39] 2026-01-14 08:40:35,933 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 03:41:39] 2026-01-14 08:40:35,933 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 03:41:39] 2026-01-14 08:40:35,933 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 03:41:39] 2026-01-14 08:40:35,933 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 03:41:39] 2026-01-14 08:40:35,933 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 03:41:39] 2026-01-14 08:40:35,933 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 03:41:39] 2026-01-14 08:40:35,933 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 03:41:39] 2026-01-14 08:40:35,933 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 03:41:39] 2026-01-14 08:40:35,933 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 03:41:39] 2026-01-14 08:40:35,933 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 03:41:39] 2026-01-14 08:40:35,934 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 03:41:39] 2026-01-14 08:40:35,934 | INFO     | job 6969262136 has completed (purged errors)
[2026-01-14 03:41:39] 2026-01-14 08:40:35,934 | INFO     | overall cleanup function is called
[2026-01-14 03:41:39] 2026-01-14 08:40:36,955 | INFO     | --- collectZombieJob: --- 10, [1759700]
[2026-01-14 03:41:39] 2026-01-14 08:40:36,956 | INFO     | zombie collector waiting for pid 1759700
[2026-01-14 03:41:39] 2026-01-14 08:40:36,956 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 03:41:39] 2026-01-14 08:40:36,956 | INFO     | collected zombie processes
[2026-01-14 03:41:39] 2026-01-14 08:40:36,956 | INFO     | will attempt to kill all subprocesses of pid=1759700
[2026-01-14 03:41:39] 2026-01-14 08:40:38,086 | INFO     | process IDs to be killed: [1759700] (in reverse order)
[2026-01-14 03:41:39] 2026-01-14 08:40:38,284 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 03:41:39] 2026-01-14 08:40:38,284 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 03:41:39] 2026-01-14 08:40:38,379 | INFO     | did not find any defunct processes belonging to 1759700
[2026-01-14 03:41:39] 2026-01-14 08:40:38,474 | INFO     | did not find any defunct processes belonging to 1759700
[2026-01-14 03:41:39] 2026-01-14 08:40:38,475 | INFO     | ready for new job
[2026-01-14 03:41:39] 2026-01-14 08:40:38,475 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 03:41:39] 2026-01-14 08:40:38,476 | INFO     | ***************************************
[2026-01-14 03:41:39] 2026-01-14 08:40:38,476 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 03:41:39] 2026-01-14 08:40:38,477 | INFO     | ***************************************
[2026-01-14 03:41:39] 2026-01-14 08:40:38,477 | INFO     | 
[2026-01-14 03:41:39] 2026-01-14 08:40:38,522 | INFO     | architecture information:
[2026-01-14 03:41:39] 2026-01-14 08:40:38,530 | INFO     | executing command: cat /etc/os-release
[2026-01-14 03:41:39] 2026-01-14 08:40:38,643 | INFO     | cat /etc/os-release:
[2026-01-14 03:41:39] NAME="CentOS Linux"
[2026-01-14 03:41:39] VERSION="7 (Core)"
[2026-01-14 03:41:39] ID="centos"
[2026-01-14 03:41:39] ID_LIKE="rhel fedora"
[2026-01-14 03:41:39] VERSION_ID="7"
[2026-01-14 03:41:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 03:41:39] ANSI_COLOR="0;31"
[2026-01-14 03:41:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 03:41:39] HOME_URL="https://www.centos.org/"
[2026-01-14 03:41:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 03:41:39] 
[2026-01-14 03:41:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 03:41:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 03:41:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 03:41:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 03:41:39] 
[2026-01-14 03:41:39] 2026-01-14 08:40:38,643 | INFO     | ***************************************
[2026-01-14 03:41:39] 2026-01-14 08:40:39,147 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-14 03:41:39] 2026-01-14 08:40:39,210 | INFO     | sufficient remaining disk space (70329040896 B)
[2026-01-14 03:41:39] 2026-01-14 08:40:39,210 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 03:41:39] 2026-01-14 08:40:39,210 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 03:41:39] 2026-01-14 08:40:39,210 | INFO     | update_server=False
[2026-01-14 03:41:39] 2026-01-14 08:40:39,210 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 03:41:39] 2026-01-14 08:40:39,211 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 03:41:39] 2026-01-14 08:40:39,211 | INFO     | aborting loop
[2026-01-14 03:41:39] 2026-01-14 08:40:39,211 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 03:41:39] 2026-01-14 08:40:39,380 | INFO     | all job control threads have been joined
[2026-01-14 03:41:39] 2026-01-14 08:40:39,748 | INFO     | all data control threads have been joined
[2026-01-14 03:41:39] 2026-01-14 08:40:40,217 | INFO     | [job] retrieve thread has finished
[2026-01-14 03:41:39] 2026-01-14 08:40:40,217 | INFO     | [job] job monitor thread has finished
[2026-01-14 03:41:39] 2026-01-14 08:40:40,274 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 03:41:39] 2026-01-14 08:40:40,279 | INFO     | [payload] failed_post thread has finished
[2026-01-14 03:41:39] 2026-01-14 08:40:40,361 | INFO     | [data] copytool_in thread has finished
[2026-01-14 03:41:39] 2026-01-14 08:40:40,387 | INFO     | [job] control thread has finished
[2026-01-14 03:41:39] 2026-01-14 08:40:40,389 | INFO     | all payload control threads have been joined
[2026-01-14 03:41:39] 2026-01-14 08:40:40,410 | INFO     | [job] validate thread has finished
[2026-01-14 03:41:39] 2026-01-14 08:40:40,755 | INFO     | [data] control thread has finished
[2026-01-14 03:41:39] 2026-01-14 08:40:40,763 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 03:41:39] 2026-01-14 08:40:40,862 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 03:41:39] 2026-01-14 08:40:40,992 | INFO     | [payload] validate_post thread has finished
[2026-01-14 03:41:39] 2026-01-14 08:40:41,183 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 03:41:39] 2026-01-14 08:40:41,217 | INFO     | [data] copytool_out thread has finished
[2026-01-14 03:41:39] 2026-01-14 08:40:41,266 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 03:41:39] 2026-01-14 08:40:41,395 | INFO     | [payload] control thread has finished
[2026-01-14 03:41:39] 2026-01-14 08:40:41,868 | INFO     | [job] queue monitor thread has finished
[2026-01-14 03:41:39] 2026-01-14 08:40:42,615 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 03:41:39] 2026-01-14 08:40:46,624 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 03:41:39] 2026-01-14 08:41:09,626 | INFO     | PID=1752610 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-14 03:41:39] 2026-01-14 08:41:09,626 | INFO     | .. there are 24 such processes running
[2026-01-14 03:41:39] 2026-01-14 08:41:09,627 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 03:41:39] 2026-01-14 08:41:09,627 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 03:41:39] 2026-01-14 08:41:09,627 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 03:41:39] 2026-01-14 08:41:31,763 | INFO     | [monitor] cgroup control has ended
[2026-01-14 03:41:39] 2026-01-14 08:41:32,442 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140015989208896)>', '<ExcThread(monitor, started 140015640233728)>']
[2026-01-14 03:41:39] 2026-01-14 08:41:32,780 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 03:41:39] 2026-01-14 08:41:32,781 | INFO     | [monitor] control thread has ended
[2026-01-14 03:41:39] 2026-01-14 08:41:37,479 | INFO     | all workflow threads have been joined
[2026-01-14 03:41:39] 2026-01-14 08:41:37,480 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 03:41:39] 2026-01-14 08:41:37,480 | INFO     | traces error code: 0
[2026-01-14 03:41:39] 2026-01-14 08:41:37,480 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 03:41:39] 2026-01-14 08:41:38,519 [wrapper] ==== pilot stdout END ====
[2026-01-14 03:41:39] 2026-01-14 08:41:38,545 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 03:41:39] 2026-01-14 08:41:38,583 [wrapper] pilotpid: 1752610
[2026-01-14 03:41:39] 2026-01-14 08:41:38,614 [wrapper] Pilot exit status: 0
[2026-01-14 03:41:39] 2026-01-14 08:41:38,777 [wrapper] pandaids: 6969262136
[2026-01-14 03:41:39] 2026-01-14 08:41:38,999 [wrapper] cleanup supervisor_pilot 2084234 1752611
[2026-01-14 03:41:39] 2026-01-14 08:41:39,001 [wrapper] Test setup, not cleaning
[2026-01-14 03:41:39] 2026-01-14 08:41:39,004 [wrapper] apfmon messages muted
[2026-01-14 03:41:39] 2026-01-14 08:41:39,006 [wrapper] ==== wrapper stdout END ====
[2026-01-14 03:41:39] 2026-01-14 08:41:39,008 [wrapper] ==== wrapper stderr END ====
[2026-01-14 03:41:39]  *** Error codes and diagnostics ***
[2026-01-14 03:41:39]     "exeErrorCode": 0,
[2026-01-14 03:41:39]     "exeErrorDiag": "",
[2026-01-14 03:41:39]     "pilotErrorCode": 0,
[2026-01-14 03:41:39]     "pilotErrorDiag": "",
[2026-01-14 03:41:39]  *** Listing of results directory ***
[2026-01-14 03:41:39] total 742676
[2026-01-14 03:41:39] -rwx------ 1 boincer umatlas     36322 Jan 13 16:58 runpilot2-wrapper.sh
[2026-01-14 03:41:39] -rw-r--r-- 1 boincer umatlas    579449 Jan 13 17:05 pilot3.tar.gz
[2026-01-14 03:41:39] -rw-r--r-- 1 boincer umatlas      5112 Jan 13 17:12 queuedata.json
[2026-01-14 03:41:39] -rw-r--r-- 1 boincer umatlas       100 Jan 14 02:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 03:41:39] -rwxr-xr-x 1 boincer umatlas      7986 Jan 14 02:12 run_atlas
[2026-01-14 03:41:39] -rw-r--r-- 1 boincer umatlas       105 Jan 14 02:12 job.xml
[2026-01-14 03:41:39] -rw-r--r-- 2 boincer umatlas 601775358 Jan 14 02:12 EVNT.32794306._000115.pool.root.1
[2026-01-14 03:41:39] -rw-r--r-- 2 boincer umatlas     15847 Jan 14 02:12 start_atlas.sh
[2026-01-14 03:41:39] drwxrwx--x 2 boincer umatlas      4096 Jan 14 02:12 shared
[2026-01-14 03:41:39] -rw-r--r-- 2 boincer umatlas    592390 Jan 14 02:12 input.tar.gz
[2026-01-14 03:41:39] -rw-r--r-- 1 boincer umatlas         0 Jan 14 02:12 boinc_lockfile
[2026-01-14 03:41:39] -rw-r--r-- 1 boincer umatlas      2505 Jan 14 02:12 pandaJob.out
[2026-01-14 03:41:39] -rw------- 1 boincer umatlas        57 Jan 14 02:12 setup.sh.local
[2026-01-14 03:41:39] -rw------- 1 boincer umatlas    997218 Jan 14 02:12 agis_schedconf.cvmfs.json
[2026-01-14 03:41:39] -rw------- 1 boincer umatlas   1516246 Jan 14 02:12 agis_ddmendpoints.agis.ALL.json
[2026-01-14 03:41:39] drwx------ 5 boincer umatlas      4096 Jan 14 02:12 pilot3
[2026-01-14 03:41:39] -rw-r--r-- 1 boincer umatlas      6874 Jan 14 03:37 init_data.xml
[2026-01-14 03:41:39] -rw------- 1 boincer umatlas 152705784 Jan 14 03:38 HITS.48215263._002854.pool.root.1
[2026-01-14 03:41:39] -rw-r--r-- 1 boincer umatlas       531 Jan 14 03:38 boinc_task_state.xml
[2026-01-14 03:41:39] -rw------- 1 boincer umatlas      1040 Jan 14 03:39 memory_monitor_summary.json
[2026-01-14 03:41:39] -rw------- 1 boincer umatlas    321396 Jan 14 03:40 log.48215263._002854.job.log.tgz.1
[2026-01-14 03:41:39] -rw------- 1 boincer umatlas      7820 Jan 14 03:40 heartbeat.json
[2026-01-14 03:41:39] -rw------- 1 boincer umatlas        95 Jan 14 03:41 pilot_heartbeat.json
[2026-01-14 03:41:39] -rw-r--r-- 1 boincer umatlas      8192 Jan 14 03:41 boinc_mmap_file
[2026-01-14 03:41:39] -rw-r--r-- 1 boincer umatlas        27 Jan 14 03:41 wrapper_checkpoint.txt
[2026-01-14 03:41:39] -rw------- 1 boincer umatlas      4824 Jan 14 03:41 pilotlog.txt
[2026-01-14 03:41:39] -rw------- 1 boincer umatlas    727931 Jan 14 03:41 log.48215263._002854.job.log.1
[2026-01-14 03:41:39] -rw------- 1 boincer umatlas       357 Jan 14 03:41 output.list
[2026-01-14 03:41:39] -rw-r--r-- 1 boincer umatlas       620 Jan 14 03:41 runtime_log
[2026-01-14 03:41:39] -rw------- 1 boincer umatlas   1064960 Jan 14 03:41 result.tar.gz
[2026-01-14 03:41:39] -rw-r--r-- 1 boincer umatlas      9342 Jan 14 03:41 runtime_log.err
[2026-01-14 03:41:39] -rw------- 1 boincer umatlas       652 Jan 14 03:41 ftKMDmea1z8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm0qoKDmoYskMn.diag
[2026-01-14 03:41:39] -rw-r--r-- 1 boincer umatlas     22426 Jan 14 03:41 stderr.txt
[2026-01-14 03:41:39] HITS file was successfully produced:
[2026-01-14 03:41:39] -rw------- 1 boincer umatlas 152705784 Jan 14 03:38 shared/HITS.pool.root.1
[2026-01-14 03:41:39]  *** Contents of shared directory: ***
[2026-01-14 03:41:39] total 738444
[2026-01-14 03:41:39] -rw-r--r-- 2 boincer umatlas 601775358 Jan 14 02:12 ATLAS.root_0
[2026-01-14 03:41:39] -rw-r--r-- 2 boincer umatlas     15847 Jan 14 02:12 start_atlas.sh
[2026-01-14 03:41:39] -rw-r--r-- 2 boincer umatlas    592390 Jan 14 02:12 input.tar.gz
[2026-01-14 03:41:39] -rw------- 1 boincer umatlas 152705784 Jan 14 03:38 HITS.pool.root.1
[2026-01-14 03:41:39] -rw------- 1 boincer umatlas   1064960 Jan 14 03:41 result.tar.gz
03:41:41 (1748874): run_atlas exited; CPU time 28046.406662
03:41:41 (1748874): called boinc_finish(0)

</stderr_txt>
]]>

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