Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:39:58 (28837): wrapper (7.7.26015): starting
23:39:58 (28837): wrapper: running run_atlas (--nthreads 8)
[2026-01-13 23:39:58] Arguments: --nthreads 8
[2026-01-13 23:39:58] Threads: 8
[2026-01-13 23:39:58] Checking for CVMFS
[2026-01-13 23:39:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-13 23:39:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-13 23:39:59] Running cvmfs_config stat atlas.cern.ch
[2026-01-13 23:39:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-13 23:39:59] 2.11.2.0 2856 214811 82448 155118 3 57 12210205 20275201 1 130560 0 70450711 99.912 10514881 34186 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-13 23:39:59] CVMFS is ok
[2026-01-13 23:39:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 23:39:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 23:39:59] Further information can be found at the LHC@home message board.
[2026-01-13 23:39:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 23:39:59] Checking for apptainer binary...
[2026-01-13 23:39:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-13 23:39:59] Running /usr/bin/apptainer --version
[2026-01-13 23:39:59] apptainer version 1.3.2-1.el7
[2026-01-13 23:39:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 23:40:01] c-115-6.aglt2.org
[2026-01-13 23:40:01] apptainer works
[2026-01-13 23:40:01] Set ATHENA_PROC_NUMBER=8
[2026-01-13 23:40:01] Set ATHENA_CORE_NUMBER=8
[2026-01-13 23:40:01] Starting ATLAS job with PandaID=6969278100
[2026-01-13 23:40:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 00:51:30]  *** The last 200 lines of the pilot log: ***
[2026-01-14 00:51:30]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-14 00:51:30]  replicas=None
[2026-01-14 00:51:30]  scope=mc23_13p6TeV
[2026-01-14 00:51:30]  status=None
[2026-01-14 00:51:30]  status_code=0
[2026-01-14 00:51:30]  storage_token=
[2026-01-14 00:51:30]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6969278100/log.48215263._010234.job.log.tgz.1
[2026-01-14 00:51:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/02/b1/log.48215263._010234.job.log.tgz.1
[2026-01-14 00:51:30]  workdir=None
[2026-01-14 00:51:30] ]
[2026-01-14 00:51:30] 2026-01-14 05:50:48,845 | INFO     | transferring file log.48215263._010234.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6969278100/log.48215263._010234.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-14 00:51:30] 2026-01-14 05:50:48,845 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6969278100/log.48215263._010234.job.log.tgz.1 /tmp/boinchome/slots/0/log.48215263._010234.job
[2026-01-14 00:51:30] 2026-01-14 05:50:48,869 | INFO     | adding to output.list: log.48215263._010234.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/02/b1/log.48215263._010234.job.log.tg
[2026-01-14 00:51:30] 2026-01-14 05:50:48,871 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-14 00:51:30] 2026-01-14 05:50:48,871 | INFO     | summary of transferred files:
[2026-01-14 00:51:30] 2026-01-14 05:50:48,871 | INFO     |  -- lfn=log.48215263._010234.job.log.tgz.1, status_code=0, status=transferred
[2026-01-14 00:51:30] 2026-01-14 05:50:48,871 | INFO     | stage-out finished correctly
[2026-01-14 00:51:30] 2026-01-14 05:50:50,599 | INFO     | time since job start (4232s) is within the limit (349056.0s)
[2026-01-14 00:51:30] 2026-01-14 05:50:50,848 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-14 00:51:30] 2026-01-14 05:50:51,124 | INFO     | monitor loop #316: job 0:6969278100 is in state 'finished'
[2026-01-14 00:51:30] 2026-01-14 05:50:51,125 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 00:51:30] 2026-01-14 05:50:52,486 | INFO     | job 6969278100 has state=finished
[2026-01-14 00:51:30] 2026-01-14 05:50:52,487 | INFO     | preparing for final server update for job 6969278100 in state='finished'
[2026-01-14 00:51:30] 2026-01-14 05:50:52,487 | INFO     | this job has now completed (state=finished)
[2026-01-14 00:51:30] 2026-01-14 05:50:52,488 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-14 00:51:30] 2026-01-14 05:50:52,488 | INFO     | log transfer has been attempted: DONE
[2026-01-14 00:51:30] 2026-01-14 05:50:52,488 | INFO     | job 6969278100 has finished - writing final server update
[2026-01-14 00:51:30] 2026-01-14 05:50:52,488 | INFO     | total number of processed events: 400 (read)
[2026-01-14 00:51:30] 2026-01-14 05:50:52,489 | INFO     | executing command: lscpu
[2026-01-14 00:51:30] 2026-01-14 05:50:52,517 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-14 00:51:30] 2026-01-14 05:50:52,605 | INFO     | time since job start (4234s) is within the limit (349056.0s)
[2026-01-14 00:51:30] 2026-01-14 05:50:53,627 | INFO     | monitor loop #317: job 0:6969278100 is in state 'finished'
[2026-01-14 00:51:30] 2026-01-14 05:50:53,628 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 00:51:30] 2026-01-14 05:50:54,611 | INFO     | time since job start (4236s) is within the limit (349056.0s)
[2026-01-14 00:51:30] 2026-01-14 05:50:55,740 | INFO     | PID=32702 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-14 00:51:30] 2026-01-14 05:50:56,140 | INFO     | monitor loop #318: job 0:6969278100 is in state 'finished'
[2026-01-14 00:51:30] 2026-01-14 05:50:56,141 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 00:51:30] 2026-01-14 05:50:56,741 | INFO     | time since job start (4238s) is within the limit (349056.0s)
[2026-01-14 00:51:30] 2026-01-14 05:50:58,002 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-14 00:51:30] 2026-01-14 05:50:58,006 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1779.0
[2026-01-14 00:51:30] 2026-01-14 05:50:58,008 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6969278100/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 00:51:30] 2026-01-14 05:50:58,009 | INFO     | extracted standard info from prmon json
[2026-01-14 00:51:30] 2026-01-14 05:50:58,009 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 00:51:30] 2026-01-14 05:50:58,010 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 00:51:30] 2026-01-14 05:50:58,010 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 00:51:30] 2026-01-14 05:50:58,010 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 00:51:30] 2026-01-14 05:50:58,012 | INFO     | fitting pss+swap vs Time
[2026-01-14 00:51:30] 2026-01-14 05:50:58,012 | INFO     | sum of square deviations: 73882315.5
[2026-01-14 00:51:30] 2026-01-14 05:50:58,013 | INFO     | sum of deviations: -6993287903.999999
[2026-01-14 00:51:30] 2026-01-14 05:50:58,013 | INFO     | mean x: 1768367813.5
[2026-01-14 00:51:30] 2026-01-14 05:50:58,013 | INFO     | mean y: 2638554.35483871
[2026-01-14 00:51:30] 2026-01-14 05:50:58,013 | INFO     | intersect: 167386472646.18802
[2026-01-14 00:51:30] 2026-01-14 05:50:58,013 | INFO     | chi2: 0.057126459977129826
[2026-01-14 00:51:30] 2026-01-14 05:50:58,013 | INFO     | current memory leak: -94.65 B/s (using 62 data points, chi2=0.06)
[2026-01-14 00:51:30] 2026-01-14 05:50:58,014 | INFO     | could have reported an average CPU frequency of 2014 MHz (6 samples)
[2026-01-14 00:51:30] 2026-01-14 05:50:58,014 | INFO     | ..............................
[2026-01-14 00:51:30] 2026-01-14 05:50:58,014 | INFO     | . Timing measurements:
[2026-01-14 00:51:30] 2026-01-14 05:50:58,014 | INFO     | . get job = 0 s
[2026-01-14 00:51:30] 2026-01-14 05:50:58,014 | INFO     | . initial setup = 2 s
[2026-01-14 00:51:30] 2026-01-14 05:50:58,014 | INFO     | . payload setup = 7 s
[2026-01-14 00:51:30] 2026-01-14 05:50:58,014 | INFO     | . stage-in = 0 s
[2026-01-14 00:51:30] 2026-01-14 05:50:58,015 | INFO     | . payload execution = 4201 s
[2026-01-14 00:51:30] 2026-01-14 05:50:58,015 | INFO     | . stage-out = 0 s
[2026-01-14 00:51:30] 2026-01-14 05:50:58,015 | INFO     | . log creation = 0 s
[2026-01-14 00:51:30] 2026-01-14 05:50:58,015 | INFO     | ..............................
[2026-01-14 00:51:30] 2026-01-14 05:50:58,339 | INFO     | 
[2026-01-14 00:51:30] 2026-01-14 05:50:58,340 | INFO     | job summary report
[2026-01-14 00:51:30] 2026-01-14 05:50:58,340 | INFO     | --------------------------------------------------
[2026-01-14 00:51:30] 2026-01-14 05:50:58,340 | INFO     | PanDA job id: 6969278100
[2026-01-14 00:51:30] 2026-01-14 05:50:58,340 | INFO     | task id: 48215263
[2026-01-14 00:51:30] 2026-01-14 05:50:58,340 | INFO     | errors: (none)
[2026-01-14 00:51:30] 2026-01-14 05:50:58,341 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 00:51:30] 2026-01-14 05:50:58,341 | INFO     | pilot state: finished 
[2026-01-14 00:51:30] 2026-01-14 05:50:58,341 | INFO     | transexitcode: 0
[2026-01-14 00:51:30] 2026-01-14 05:50:58,341 | INFO     | exeerrorcode: 0
[2026-01-14 00:51:30] 2026-01-14 05:50:58,341 | INFO     | exeerrordiag: 
[2026-01-14 00:51:30] 2026-01-14 05:50:58,341 | INFO     | exitcode: 0
[2026-01-14 00:51:30] 2026-01-14 05:50:58,342 | INFO     | exitmsg: OK
[2026-01-14 00:51:30] 2026-01-14 05:50:58,342 | INFO     | cpuconsumptiontime: 31109 s
[2026-01-14 00:51:30] 2026-01-14 05:50:58,342 | INFO     | nevents: 400
[2026-01-14 00:51:30] 2026-01-14 05:50:58,342 | INFO     | neventsw: 0
[2026-01-14 00:51:30] 2026-01-14 05:50:58,342 | INFO     | pid: 6763
[2026-01-14 00:51:30] 2026-01-14 05:50:58,342 | INFO     | pgrp: 6763
[2026-01-14 00:51:30] 2026-01-14 05:50:58,342 | INFO     | corecount: 8
[2026-01-14 00:51:30] 2026-01-14 05:50:58,342 | INFO     | event service: False
[2026-01-14 00:51:30] 2026-01-14 05:50:58,342 | INFO     | sizes: {0: 2283949, 6: 2284211, 11: 2284239, 4213: 2310131, 4214: 2319129, 4216: 2319185, 4223: 2319507}
[2026-01-14 00:51:30] 2026-01-14 05:50:58,343 | INFO     | --------------------------------------------------
[2026-01-14 00:51:30] 2026-01-14 05:50:58,343 | INFO     | 
[2026-01-14 00:51:30] 2026-01-14 05:50:58,343 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-14 00:51:30] 2026-01-14 05:50:58,370 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 00:51:30] 2026-01-14 05:50:58,371 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 00:51:30] 2026-01-14 05:50:58,371 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 00:51:30] 2026-01-14 05:50:58,371 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 00:51:30] 2026-01-14 05:50:58,371 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 00:51:30] 2026-01-14 05:50:58,371 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 00:51:30] 2026-01-14 05:50:58,372 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 00:51:30] 2026-01-14 05:50:58,372 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 00:51:30] 2026-01-14 05:50:58,372 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 00:51:30] 2026-01-14 05:50:58,372 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 00:51:30] 2026-01-14 05:50:58,372 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 00:51:30] 2026-01-14 05:50:58,373 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 00:51:30] 2026-01-14 05:50:58,373 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 00:51:30] 2026-01-14 05:50:58,373 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 00:51:30] 2026-01-14 05:50:58,373 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 00:51:30] 2026-01-14 05:50:58,373 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 00:51:30] 2026-01-14 05:50:58,373 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 00:51:30] 2026-01-14 05:50:58,374 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 00:51:30] 2026-01-14 05:50:58,374 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 00:51:30] 2026-01-14 05:50:58,374 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 00:51:30] 2026-01-14 05:50:58,374 | INFO     | job 6969278100 has completed (purged errors)
[2026-01-14 00:51:30] 2026-01-14 05:50:58,374 | INFO     | overall cleanup function is called
[2026-01-14 00:51:30] 2026-01-14 05:50:59,383 | INFO     | --- collectZombieJob: --- 10, [6763]
[2026-01-14 00:51:30] 2026-01-14 05:50:59,383 | INFO     | zombie collector waiting for pid 6763
[2026-01-14 00:51:30] 2026-01-14 05:50:59,389 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 00:51:30] 2026-01-14 05:50:59,389 | INFO     | collected zombie processes
[2026-01-14 00:51:30] 2026-01-14 05:50:59,390 | INFO     | will attempt to kill all subprocesses of pid=6763
[2026-01-14 00:51:30] 2026-01-14 05:50:59,476 | INFO     | process IDs to be killed: [6763] (in reverse order)
[2026-01-14 00:51:30] 2026-01-14 05:50:59,530 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 00:51:30] 2026-01-14 05:50:59,531 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 00:51:30] 2026-01-14 05:50:59,537 | INFO     | did not find any defunct processes belonging to 6763
[2026-01-14 00:51:30] 2026-01-14 05:50:59,541 | INFO     | did not find any defunct processes belonging to 6763
[2026-01-14 00:51:30] 2026-01-14 05:50:59,541 | INFO     | ready for new job
[2026-01-14 00:51:30] 2026-01-14 05:50:59,541 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 00:51:30] 2026-01-14 05:50:59,543 | INFO     | ***************************************
[2026-01-14 00:51:30] 2026-01-14 05:50:59,543 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 00:51:30] 2026-01-14 05:50:59,543 | INFO     | ***************************************
[2026-01-14 00:51:30] 2026-01-14 05:50:59,543 | INFO     | 
[2026-01-14 00:51:30] 2026-01-14 05:50:59,544 | INFO     | architecture information:
[2026-01-14 00:51:30] 2026-01-14 05:50:59,544 | INFO     | executing command: cat /etc/os-release
[2026-01-14 00:51:30] 2026-01-14 05:50:59,562 | INFO     | cat /etc/os-release:
[2026-01-14 00:51:30] NAME="CentOS Linux"
[2026-01-14 00:51:30] VERSION="7 (Core)"
[2026-01-14 00:51:30] ID="centos"
[2026-01-14 00:51:30] ID_LIKE="rhel fedora"
[2026-01-14 00:51:30] VERSION_ID="7"
[2026-01-14 00:51:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 00:51:30] ANSI_COLOR="0;31"
[2026-01-14 00:51:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 00:51:30] HOME_URL="https://www.centos.org/"
[2026-01-14 00:51:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 00:51:30] 
[2026-01-14 00:51:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 00:51:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 00:51:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 00:51:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 00:51:30] 
[2026-01-14 00:51:30] 2026-01-14 05:50:59,562 | INFO     | ***************************************
[2026-01-14 00:51:30] 2026-01-14 05:51:00,065 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-14 00:51:30] 2026-01-14 05:51:00,085 | INFO     | sufficient remaining disk space (17860395008 B)
[2026-01-14 00:51:30] 2026-01-14 05:51:00,086 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 00:51:30] 2026-01-14 05:51:00,087 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 00:51:30] 2026-01-14 05:51:00,087 | INFO     | update_server=False
[2026-01-14 00:51:30] 2026-01-14 05:51:00,087 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 00:51:30] 2026-01-14 05:51:00,088 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 00:51:30] 2026-01-14 05:51:00,088 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 00:51:30] 2026-01-14 05:51:00,088 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 00:51:30] 2026-01-14 05:51:00,089 | INFO     | aborting loop
[2026-01-14 00:51:30] 2026-01-14 05:51:00,499 | INFO     | all payload control threads have been joined
[2026-01-14 00:51:30] 2026-01-14 05:51:00,753 | INFO     | all job control threads have been joined
[2026-01-14 00:51:30] 2026-01-14 05:51:00,792 | INFO     | all data control threads have been joined
[2026-01-14 00:51:30] 2026-01-14 05:51:01,091 | INFO     | [job] queue monitor thread has finished
[2026-01-14 00:51:30] 2026-01-14 05:51:01,092 | INFO     | [job] retrieve thread has finished
[2026-01-14 00:51:30] 2026-01-14 05:51:01,095 | INFO     | [job] job monitor thread has finished
[2026-01-14 00:51:30] 2026-01-14 05:51:01,096 | INFO     | [data] copytool_in thread has finished
[2026-01-14 00:51:30] 2026-01-14 05:51:01,436 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 00:51:30] 2026-01-14 05:51:01,505 | INFO     | [payload] control thread has finished
[2026-01-14 00:51:30] 2026-01-14 05:51:01,534 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 00:51:30] 2026-01-14 05:51:01,759 | INFO     | [job] control thread has finished
[2026-01-14 00:51:30] 2026-01-14 05:51:01,801 | INFO     | [data] control thread has finished
[2026-01-14 00:51:30] 2026-01-14 05:51:01,928 | INFO     | [payload] validate_post thread has finished
[2026-01-14 00:51:30] 2026-01-14 05:51:02,094 | INFO     | [data] copytool_out thread has finished
[2026-01-14 00:51:30] 2026-01-14 05:51:02,307 | INFO     | [payload] failed_post thread has finished
[2026-01-14 00:51:30] 2026-01-14 05:51:02,550 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 00:51:30] 2026-01-14 05:51:02,590 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 00:51:30] 2026-01-14 05:51:02,592 | INFO     | [job] validate thread has finished
[2026-01-14 00:51:30] 2026-01-14 05:51:05,440 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 00:51:30] 2026-01-14 05:51:10,417 | INFO     | job.realtimelogging is not enabled
[2026-01-14 00:51:30] 2026-01-14 05:51:11,418 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 00:51:30] 2026-01-14 05:51:24,656 | INFO     | [monitor] cgroup control has ended
[2026-01-14 00:51:30] 2026-01-14 05:51:25,051 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139912535893824)>', '<ExcThread(monitor, started 139911470491392)>']
[2026-01-14 00:51:30] 2026-01-14 05:51:29,946 | INFO     | PID=32702 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-14 00:51:30] 2026-01-14 05:51:29,952 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 00:51:30] 2026-01-14 05:51:29,952 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 00:51:30] 2026-01-14 05:51:29,952 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 00:51:30] 2026-01-14 05:51:29,953 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 00:51:30] 2026-01-14 05:51:29,953 | INFO     | [monitor] control thread has ended
[2026-01-14 00:51:30] 2026-01-14 05:51:30,076 | INFO     | all workflow threads have been joined
[2026-01-14 00:51:30] 2026-01-14 05:51:30,077 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 00:51:30] 2026-01-14 05:51:30,077 | INFO     | traces error code: 0
[2026-01-14 00:51:30] 2026-01-14 05:51:30,078 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 00:51:30] 2026-01-14 05:51:30,200 [wrapper] ==== pilot stdout END ====
[2026-01-14 00:51:30] 2026-01-14 05:51:30,204 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 00:51:30] 2026-01-14 05:51:30,208 [wrapper] pilotpid: 32702
[2026-01-14 00:51:30] 2026-01-14 05:51:30,213 [wrapper] Pilot exit status: 0
[2026-01-14 00:51:30] 2026-01-14 05:51:30,231 [wrapper] pandaids: 6969278100
[2026-01-14 00:51:30] 2026-01-14 05:51:30,274 [wrapper] cleanup supervisor_pilot  4965 32703
[2026-01-14 00:51:30] 2026-01-14 05:51:30,279 [wrapper] Test setup, not cleaning
[2026-01-14 00:51:30] 2026-01-14 05:51:30,284 [wrapper] apfmon messages muted
[2026-01-14 00:51:30] 2026-01-14 05:51:30,289 [wrapper] ==== wrapper stdout END ====
[2026-01-14 00:51:30] 2026-01-14 05:51:30,294 [wrapper] ==== wrapper stderr END ====
[2026-01-14 00:51:30]  *** Error codes and diagnostics ***
[2026-01-14 00:51:30]     "exeErrorCode": 0,
[2026-01-14 00:51:30]     "exeErrorDiag": "",
[2026-01-14 00:51:30]     "pilotErrorCode": 0,
[2026-01-14 00:51:30]     "pilotErrorDiag": "",
[2026-01-14 00:51:30]  *** Listing of results directory ***
[2026-01-14 00:51:30] total 736932
[2026-01-14 00:51:30] -rw-r--r-- 1 boincer umatlas    579449 Jan 13 20:50 pilot3.tar.gz
[2026-01-14 00:51:30] -rwx------ 1 boincer umatlas     36322 Jan 13 20:50 runpilot2-wrapper.sh
[2026-01-14 00:51:30] -rw-r--r-- 1 boincer umatlas      5112 Jan 13 20:51 queuedata.json
[2026-01-14 00:51:30] -rw-r--r-- 1 boincer umatlas       100 Jan 13 23:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 00:51:30] -rwxr-xr-x 1 boincer umatlas      7986 Jan 13 23:39 run_atlas
[2026-01-14 00:51:30] -rw-r--r-- 1 boincer umatlas       105 Jan 13 23:39 job.xml
[2026-01-14 00:51:30] -rw-r--r-- 2 boincer umatlas 598291173 Jan 13 23:39 EVNT.32794306._000410.pool.root.1
[2026-01-14 00:51:30] -rw-r--r-- 2 boincer umatlas     15847 Jan 13 23:39 start_atlas.sh
[2026-01-14 00:51:30] drwxrwx--x 2 boincer umatlas      4096 Jan 13 23:39 shared
[2026-01-14 00:51:30] -rw-r--r-- 2 boincer umatlas    592395 Jan 13 23:39 input.tar.gz
[2026-01-14 00:51:30] -rw-r--r-- 1 boincer umatlas         0 Jan 13 23:39 boinc_lockfile
[2026-01-14 00:51:30] -rw-r--r-- 1 boincer umatlas      2507 Jan 13 23:40 pandaJob.out
[2026-01-14 00:51:30] -rw------- 1 boincer umatlas        57 Jan 13 23:40 setup.sh.local
[2026-01-14 00:51:30] -rw------- 1 boincer umatlas    997226 Jan 13 23:40 agis_schedconf.cvmfs.json
[2026-01-14 00:51:30] -rw------- 1 boincer umatlas   1516246 Jan 13 23:40 agis_ddmendpoints.agis.ALL.json
[2026-01-14 00:51:30] drwx------ 5 boincer umatlas      4096 Jan 13 23:40 pilot3
[2026-01-14 00:51:30] -rw-r--r-- 1 boincer umatlas      5908 Jan 14 00:49 init_data.xml
[2026-01-14 00:51:30] -rw-r--r-- 1 boincer umatlas       530 Jan 14 00:50 boinc_task_state.xml
[2026-01-14 00:51:30] -rw------- 1 boincer umatlas 150534552 Jan 14 00:50 HITS.48215263._010234.pool.root.1
[2026-01-14 00:51:30] -rw------- 1 boincer umatlas      1057 Jan 14 00:50 memory_monitor_summary.json
[2026-01-14 00:51:30] -rw------- 1 boincer umatlas    316715 Jan 14 00:50 log.48215263._010234.job.log.tgz.1
[2026-01-14 00:51:30] -rw------- 1 boincer umatlas      7838 Jan 14 00:50 heartbeat.json
[2026-01-14 00:51:30] -rw-r--r-- 1 boincer umatlas      8192 Jan 14 00:51 boinc_mmap_file
[2026-01-14 00:51:30] -rw-r--r-- 1 boincer umatlas        27 Jan 14 00:51 wrapper_checkpoint.txt
[2026-01-14 00:51:30] -rw------- 1 boincer umatlas        95 Jan 14 00:51 pilot_heartbeat.json
[2026-01-14 00:51:30] -rw------- 1 boincer umatlas      4818 Jan 14 00:51 pilotlog.txt
[2026-01-14 00:51:30] -rw------- 1 boincer umatlas    617960 Jan 14 00:51 log.48215263._010234.job.log.1
[2026-01-14 00:51:30] -rw------- 1 boincer umatlas       357 Jan 14 00:51 output.list
[2026-01-14 00:51:30] -rw-r--r-- 1 boincer umatlas       620 Jan 14 00:51 runtime_log
[2026-01-14 00:51:30] -rw------- 1 boincer umatlas    952320 Jan 14 00:51 result.tar.gz
[2026-01-14 00:51:30] -rw------- 1 boincer umatlas       657 Jan 14 00:51 sMQMDmHD5z8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmaOjKDmaKxmSo.diag
[2026-01-14 00:51:30] -rw-r--r-- 1 boincer umatlas      9337 Jan 14 00:51 runtime_log.err
[2026-01-14 00:51:30] -rw-r--r-- 1 boincer umatlas     21982 Jan 14 00:51 stderr.txt
[2026-01-14 00:51:30] HITS file was successfully produced:
[2026-01-14 00:51:30] -rw------- 1 boincer umatlas 150534552 Jan 14 00:50 shared/HITS.pool.root.1
[2026-01-14 00:51:30]  *** Contents of shared directory: ***
[2026-01-14 00:51:30] total 732812
[2026-01-14 00:51:30] -rw-r--r-- 2 boincer umatlas 598291173 Jan 13 23:39 ATLAS.root_0
[2026-01-14 00:51:30] -rw-r--r-- 2 boincer umatlas     15847 Jan 13 23:39 start_atlas.sh
[2026-01-14 00:51:30] -rw-r--r-- 2 boincer umatlas    592395 Jan 13 23:39 input.tar.gz
[2026-01-14 00:51:30] -rw------- 1 boincer umatlas 150534552 Jan 14 00:50 HITS.pool.root.1
[2026-01-14 00:51:30] -rw------- 1 boincer umatlas    952320 Jan 14 00:51 result.tar.gz
00:51:31 (28837): run_atlas exited; CPU time 31091.080078
00:51:31 (28837): called boinc_finish(0)

</stderr_txt>
]]>

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