Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:29:17 (14815): wrapper (7.7.26015): starting
08:29:17 (14815): wrapper: running run_atlas (--nthreads 8)
[2026-01-14 08:29:17] Arguments: --nthreads 8
[2026-01-14 08:29:17] Threads: 8
[2026-01-14 08:29:17] Checking for CVMFS
[2026-01-14 08:29:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 08:29:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 08:29:19] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 08:29:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 08:29:20] 2.11.2.0 16537 355469 191720 155123 2 60 19362968 25165824 96 130560 383 152713082 99.854 98665443 1323 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-14 08:29:20] CVMFS is ok
[2026-01-14 08:29:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 08:29:20] Checking for apptainer binary...
[2026-01-14 08:29:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 08:29:20] Running /usr/bin/apptainer --version
[2026-01-14 08:29:20] apptainer version 1.3.2-1.el7
[2026-01-14 08:29:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 08:29:33] cg-vwn365.simple-grid.lan
[2026-01-14 08:29:33] apptainer works
[2026-01-14 08:29:33] Set ATHENA_PROC_NUMBER=8
[2026-01-14 08:29:33] Set ATHENA_CORE_NUMBER=8
[2026-01-14 08:29:33] Starting ATLAS job with PandaID=6969277266
[2026-01-14 08:29:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 11:31:28]  *** The last 200 lines of the pilot log: ***
[2026-01-14 11:31:28] 2026-01-14 10:30:33,729 | INFO     | time since job start (10594s) is within the limit (349056.0s)
[2026-01-14 11:31:28] 2026-01-14 10:30:34,724 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-14 11:31:28] 2026-01-14 10:30:34,726 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-14 11:31:28] 2026-01-14 10:30:34,728 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6969277266/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 11:31:28] 2026-01-14 10:30:34,728 | INFO     | extracted standard info from prmon json
[2026-01-14 11:31:28] 2026-01-14 10:30:34,728 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 11:31:28] 2026-01-14 10:30:34,729 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 11:31:28] 2026-01-14 10:30:34,729 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 11:31:28] 2026-01-14 10:30:34,729 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 11:31:28] 2026-01-14 10:30:34,733 | INFO     | fitting pss+swap vs Time
[2026-01-14 11:31:28] 2026-01-14 10:30:34,733 | INFO     | sum of square deviations: 1342841922.0
[2026-01-14 11:31:28] 2026-01-14 10:30:34,735 | INFO     | sum of deviations: 62341415681.000046
[2026-01-14 11:31:28] 2026-01-14 10:30:34,735 | INFO     | mean x: 1768381536.0
[2026-01-14 11:31:28] 2026-01-14 10:30:34,735 | INFO     | mean y: 2434261.1349693253
[2026-01-14 11:31:28] 2026-01-14 10:30:34,735 | INFO     | intersect: -82094651488.30841
[2026-01-14 11:31:28] 2026-01-14 10:30:34,736 | INFO     | chi2: 7.642068920556699
[2026-01-14 11:31:28] 2026-01-14 10:30:34,736 | INFO     | sum of square deviations: 1223016419.5
[2026-01-14 11:31:28] 2026-01-14 10:30:34,737 | INFO     | sum of deviations: 71208542760.00002
[2026-01-14 11:31:28] 2026-01-14 10:30:34,737 | INFO     | mean x: 1768381383.5
[2026-01-14 11:31:28] 2026-01-14 10:30:34,737 | INFO     | mean y: 2445199.569620253
[2026-01-14 11:31:28] 2026-01-14 10:30:34,738 | INFO     | intersect: -102959264353.29851
[2026-01-14 11:31:28] 2026-01-14 10:30:34,738 | INFO     | chi2: 6.9619628471851
[2026-01-14 11:31:28] 2026-01-14 10:30:34,738 | INFO     | current chi2=6.9619628471851 (change=8.899501960027552 %)
[2026-01-14 11:31:28] 2026-01-14 10:30:34,738 | INFO     | right removable region: 157
[2026-01-14 11:31:28] 2026-01-14 10:30:34,739 | INFO     | sum of square deviations: 1223016419.5
[2026-01-14 11:31:28] 2026-01-14 10:30:34,740 | INFO     | sum of deviations: 7174505575.500004
[2026-01-14 11:31:28] 2026-01-14 10:30:34,740 | INFO     | mean x: 1768381688.5
[2026-01-14 11:31:28] 2026-01-14 10:30:34,740 | INFO     | mean y: 2504399.1075949366
[2026-01-14 11:31:28] 2026-01-14 10:30:34,740 | INFO     | intersect: -10371243721.904741
[2026-01-14 11:31:28] 2026-01-14 10:30:34,741 | INFO     | chi2: 2.740665082121785
[2026-01-14 11:31:28] 2026-01-14 10:30:34,741 | INFO     | current chi2=2.740665082121785 (change=64.1371320958705 %)
[2026-01-14 11:31:28] 2026-01-14 10:30:34,749 | INFO     | sum of square deviations: 1110539892.0
[2026-01-14 11:31:28] 2026-01-14 10:30:34,750 | INFO     | sum of deviations: -25480573154.0
[2026-01-14 11:31:28] 2026-01-14 10:30:34,751 | INFO     | mean x: 1768381841.0
[2026-01-14 11:31:28] 2026-01-14 10:30:34,751 | INFO     | mean y: 2548412.3921568627
[2026-01-14 11:31:28] 2026-01-14 10:30:34,751 | INFO     | intersect: 40576852125.748276
[2026-01-14 11:31:28] 2026-01-14 10:30:34,751 | INFO     | chi2: 0.9694709722125874
[2026-01-14 11:31:28] 2026-01-14 10:30:34,752 | INFO     | current chi2=0.9694709722125874 (change=64.62643397995802 %)
[2026-01-14 11:31:28] 2026-01-14 10:30:34,752 | INFO     | sum of square deviations: 1005179777.0
[2026-01-14 11:31:28] 2026-01-14 10:30:34,753 | INFO     | sum of deviations: -27903209778.5
[2026-01-14 11:31:28] 2026-01-14 10:30:34,753 | INFO     | mean x: 1768381993.5
[2026-01-14 11:31:28] 2026-01-14 10:30:34,753 | INFO     | mean y: 2551831.385135135
[2026-01-14 11:31:28] 2026-01-14 10:30:34,753 | INFO     | intersect: 49091814132.72222
[2026-01-14 11:31:28] 2026-01-14 10:30:34,754 | INFO     | chi2: 0.9250592629356836
[2026-01-14 11:31:28] 2026-01-14 10:30:34,754 | INFO     | current chi2=0.9250592629356836 (change=4.581025172475722 %)
[2026-01-14 11:31:28] 2026-01-14 10:30:34,754 | INFO     | left removable region: 30
[2026-01-14 11:31:28] 2026-01-14 10:30:34,754 | INFO     | sum of square deviations: 635130048.0
[2026-01-14 11:31:28] 2026-01-14 10:30:34,755 | INFO     | sum of deviations: -2110873829.0000002
[2026-01-14 11:31:28] 2026-01-14 10:30:34,755 | INFO     | mean x: 1768382268.0
[2026-01-14 11:31:28] 2026-01-14 10:30:34,755 | INFO     | mean y: 2540894.094488189
[2026-01-14 11:31:28] 2026-01-14 10:30:34,755 | INFO     | intersect: 5879812581.906155
[2026-01-14 11:31:28] 2026-01-14 10:30:34,756 | INFO     | chi2: 0.037658602305365274
[2026-01-14 11:31:28] 2026-01-14 10:30:34,756 | INFO     | current memory leak: -3.32 B/s (using 127 data points, chi2=0.04)
[2026-01-14 11:31:28] 2026-01-14 10:30:34,756 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-01-14 11:31:28] 2026-01-14 10:30:34,757 | INFO     | ..............................
[2026-01-14 11:31:28] 2026-01-14 10:30:34,757 | INFO     | . Timing measurements:
[2026-01-14 11:31:28] 2026-01-14 10:30:34,757 | INFO     | . get job = 0 s
[2026-01-14 11:31:28] 2026-01-14 10:30:34,757 | INFO     | . initial setup = 8 s
[2026-01-14 11:31:28] 2026-01-14 10:30:34,757 | INFO     | . payload setup = 158 s
[2026-01-14 11:31:28] 2026-01-14 10:30:34,757 | INFO     | . stage-in = 0 s
[2026-01-14 11:31:28] 2026-01-14 10:30:34,757 | INFO     | . payload execution = 10101 s
[2026-01-14 11:31:28] 2026-01-14 10:30:34,758 | INFO     | . stage-out = 3 s
[2026-01-14 11:31:28] 2026-01-14 10:30:34,758 | INFO     | . log creation = 1 s
[2026-01-14 11:31:28] 2026-01-14 10:30:34,758 | INFO     | ..............................
[2026-01-14 11:31:28] 2026-01-14 10:30:34,929 | INFO     | 
[2026-01-14 11:31:28] 2026-01-14 10:30:34,929 | INFO     | job summary report
[2026-01-14 11:31:28] 2026-01-14 10:30:34,930 | INFO     | --------------------------------------------------
[2026-01-14 11:31:28] 2026-01-14 10:30:34,930 | INFO     | PanDA job id: 6969277266
[2026-01-14 11:31:28] 2026-01-14 10:30:34,930 | INFO     | task id: 48215263
[2026-01-14 11:31:28] 2026-01-14 10:30:34,930 | INFO     | errors: (none)
[2026-01-14 11:31:28] 2026-01-14 10:30:34,930 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 11:31:28] 2026-01-14 10:30:34,930 | INFO     | pilot state: finished 
[2026-01-14 11:31:28] 2026-01-14 10:30:34,930 | INFO     | transexitcode: 0
[2026-01-14 11:31:28] 2026-01-14 10:30:34,930 | INFO     | exeerrorcode: 0
[2026-01-14 11:31:28] 2026-01-14 10:30:34,930 | INFO     | exeerrordiag: 
[2026-01-14 11:31:28] 2026-01-14 10:30:34,931 | INFO     | exitcode: 0
[2026-01-14 11:31:28] 2026-01-14 10:30:34,931 | INFO     | exitmsg: OK
[2026-01-14 11:31:28] 2026-01-14 10:30:34,931 | INFO     | cpuconsumptiontime: 36092 s
[2026-01-14 11:31:28] 2026-01-14 10:30:34,931 | INFO     | nevents: 400
[2026-01-14 11:31:28] 2026-01-14 10:30:34,931 | INFO     | neventsw: 0
[2026-01-14 11:31:28] 2026-01-14 10:30:34,931 | INFO     | pid: 25008
[2026-01-14 11:31:28] 2026-01-14 10:30:34,931 | INFO     | pgrp: 25008
[2026-01-14 11:31:28] 2026-01-14 10:30:34,931 | INFO     | corecount: 8
[2026-01-14 11:31:28] 2026-01-14 10:30:34,931 | INFO     | event service: False
[2026-01-14 11:31:28] 2026-01-14 10:30:34,932 | INFO     | sizes: {0: 2283117, 1: 2283803, 2: 2284002, 13: 2284002, 24: 2284058, 34: 2284086, 45: 2284242, 56: 2284270, 66: 2284298, 77: 2284326, 88: 2284382, 99: 2284690, 10
[2026-01-14 11:31:28] 2026-01-14 10:30:34,932 | INFO     | --------------------------------------------------
[2026-01-14 11:31:28] 2026-01-14 10:30:34,932 | INFO     | 
[2026-01-14 11:31:28] 2026-01-14 10:30:34,932 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2026-01-14 11:31:28] 2026-01-14 10:30:35,634 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 11:31:28] 2026-01-14 10:30:35,634 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 11:31:28] 2026-01-14 10:30:35,634 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 11:31:28] 2026-01-14 10:30:35,634 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 11:31:28] 2026-01-14 10:30:35,634 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 11:31:28] 2026-01-14 10:30:35,634 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 11:31:28] 2026-01-14 10:30:35,634 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 11:31:28] 2026-01-14 10:30:35,635 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 11:31:28] 2026-01-14 10:30:35,635 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 11:31:28] 2026-01-14 10:30:35,635 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 11:31:28] 2026-01-14 10:30:35,635 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 11:31:28] 2026-01-14 10:30:35,635 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 11:31:28] 2026-01-14 10:30:35,635 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 11:31:28] 2026-01-14 10:30:35,635 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 11:31:28] 2026-01-14 10:30:35,635 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 11:31:28] 2026-01-14 10:30:35,635 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 11:31:28] 2026-01-14 10:30:35,636 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 11:31:28] 2026-01-14 10:30:35,636 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 11:31:28] 2026-01-14 10:30:35,636 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 11:31:28] 2026-01-14 10:30:35,636 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 11:31:28] 2026-01-14 10:30:35,636 | INFO     | job 6969277266 has completed (purged errors)
[2026-01-14 11:31:28] 2026-01-14 10:30:35,636 | INFO     | overall cleanup function is called
[2026-01-14 11:31:28] 2026-01-14 10:30:36,645 | INFO     | --- collectZombieJob: --- 10, [25008]
[2026-01-14 11:31:28] 2026-01-14 10:30:36,645 | INFO     | zombie collector waiting for pid 25008
[2026-01-14 11:31:28] 2026-01-14 10:30:36,646 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 11:31:28] 2026-01-14 10:30:36,646 | INFO     | collected zombie processes
[2026-01-14 11:31:28] 2026-01-14 10:30:36,646 | INFO     | will attempt to kill all subprocesses of pid=25008
[2026-01-14 11:31:28] 2026-01-14 10:30:36,734 | INFO     | process IDs to be killed: [25008] (in reverse order)
[2026-01-14 11:31:28] 2026-01-14 10:30:37,374 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 11:31:28] 2026-01-14 10:30:37,374 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 11:31:28] 2026-01-14 10:30:37,377 | INFO     | did not find any defunct processes belonging to 25008
[2026-01-14 11:31:28] 2026-01-14 10:30:37,379 | INFO     | did not find any defunct processes belonging to 25008
[2026-01-14 11:31:28] 2026-01-14 10:30:37,379 | INFO     | ready for new job
[2026-01-14 11:31:28] 2026-01-14 10:30:37,379 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 11:31:28] 2026-01-14 10:30:37,381 | INFO     | ***************************************
[2026-01-14 11:31:28] 2026-01-14 10:30:37,381 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 11:31:28] 2026-01-14 10:30:37,381 | INFO     | ***************************************
[2026-01-14 11:31:28] 2026-01-14 10:30:37,381 | INFO     | 
[2026-01-14 11:31:28] 2026-01-14 10:30:37,382 | INFO     | pilot is running in a VM
[2026-01-14 11:31:28] 2026-01-14 10:30:37,382 | INFO     | architecture information:
[2026-01-14 11:31:28] 2026-01-14 10:30:37,408 | INFO     | executing command: cat /etc/os-release
[2026-01-14 11:31:28] 2026-01-14 10:30:37,709 | INFO     | cat /etc/os-release:
[2026-01-14 11:31:28] NAME="CentOS Linux"
[2026-01-14 11:31:28] VERSION="7 (Core)"
[2026-01-14 11:31:28] ID="centos"
[2026-01-14 11:31:28] ID_LIKE="rhel fedora"
[2026-01-14 11:31:28] VERSION_ID="7"
[2026-01-14 11:31:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 11:31:28] ANSI_COLOR="0;31"
[2026-01-14 11:31:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 11:31:28] HOME_URL="https://www.centos.org/"
[2026-01-14 11:31:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 11:31:28] 
[2026-01-14 11:31:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 11:31:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 11:31:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 11:31:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 11:31:28] 
[2026-01-14 11:31:28] 2026-01-14 10:30:37,709 | INFO     | ***************************************
[2026-01-14 11:31:28] 2026-01-14 10:30:38,212 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2026-01-14 11:31:28] 2026-01-14 10:30:38,455 | INFO     | sufficient remaining disk space (495219376128 B)
[2026-01-14 11:31:28] 2026-01-14 10:30:38,455 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 11:31:28] 2026-01-14 10:30:38,456 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 11:31:28] 2026-01-14 10:30:38,456 | INFO     | update_server=False
[2026-01-14 11:31:28] 2026-01-14 10:30:38,457 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 11:31:28] 2026-01-14 10:30:38,527 | INFO     | all data control threads have been joined
[2026-01-14 11:31:28] 2026-01-14 10:30:38,836 | INFO     | all job control threads have been joined
[2026-01-14 11:31:28] 2026-01-14 10:30:38,892 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 11:31:28] 2026-01-14 10:30:38,892 | INFO     | aborting loop
[2026-01-14 11:31:28] 2026-01-14 10:30:39,277 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 11:31:28] 2026-01-14 10:30:39,452 | INFO     | all payload control threads have been joined
[2026-01-14 11:31:28] 2026-01-14 10:30:39,463 | INFO     | [job] retrieve thread has finished
[2026-01-14 11:31:28] 2026-01-14 10:30:39,533 | INFO     | [data] control thread has finished
[2026-01-14 11:31:28] 2026-01-14 10:30:39,563 | INFO     | [payload] failed_post thread has finished
[2026-01-14 11:31:28] 2026-01-14 10:30:39,684 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 11:31:28] 2026-01-14 10:30:39,842 | INFO     | [job] control thread has finished
[2026-01-14 11:31:28] 2026-01-14 10:30:39,867 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 11:31:28] 2026-01-14 10:30:39,898 | INFO     | [job] job monitor thread has finished
[2026-01-14 11:31:28] 2026-01-14 10:30:39,945 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 11:31:28] 2026-01-14 10:30:40,030 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 11:31:28] 2026-01-14 10:30:40,115 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 11:31:28] 2026-01-14 10:30:40,402 | INFO     | [data] copytool_in thread has finished
[2026-01-14 11:31:28] 2026-01-14 10:30:40,458 | INFO     | [payload] control thread has finished
[2026-01-14 11:31:28] 2026-01-14 10:30:40,527 | INFO     | [payload] validate_post thread has finished
[2026-01-14 11:31:28] 2026-01-14 10:30:40,581 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 11:31:28] 2026-01-14 10:30:40,623 | INFO     | [job] validate thread has finished
[2026-01-14 11:31:28] 2026-01-14 10:30:40,951 | INFO     | [job] queue monitor thread has finished
[2026-01-14 11:31:28] 2026-01-14 10:30:41,284 | INFO     | [data] copytool_out thread has finished
[2026-01-14 11:31:28] 2026-01-14 10:30:43,876 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 11:31:28] 2026-01-14 10:31:06,899 | INFO     | PID=18561 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-14 11:31:28] 2026-01-14 10:31:06,899 | INFO     | .. there are 2 such processes running
[2026-01-14 11:31:28] 2026-01-14 10:31:06,900 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 11:31:28] 2026-01-14 10:31:06,900 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 11:31:28] 2026-01-14 10:31:06,900 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 11:31:28] 2026-01-14 10:31:16,176 | INFO     | [monitor] cgroup control has ended
[2026-01-14 11:31:28] 2026-01-14 10:31:18,283 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140467659392832)>', '<ExcThread(monitor, started 140467207386880)>']
[2026-01-14 11:31:28] 2026-01-14 10:31:18,972 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 11:31:28] 2026-01-14 10:31:18,972 | INFO     | [monitor] control thread has ended
[2026-01-14 11:31:28] 2026-01-14 10:31:23,309 | INFO     | all workflow threads have been joined
[2026-01-14 11:31:28] 2026-01-14 10:31:23,309 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 11:31:28] 2026-01-14 10:31:23,310 | INFO     | traces error code: 0
[2026-01-14 11:31:28] 2026-01-14 10:31:23,310 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 11:31:28] 2026-01-14 10:31:23,798 [wrapper] ==== pilot stdout END ====
[2026-01-14 11:31:28] 2026-01-14 10:31:23,917 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 11:31:28] 2026-01-14 10:31:24,077 [wrapper] pilotpid: 18561
[2026-01-14 11:31:28] 2026-01-14 10:31:24,180 [wrapper] Pilot exit status: 0
[2026-01-14 11:31:28] 2026-01-14 10:31:24,592 [wrapper] pandaids: 6969277266
[2026-01-14 11:31:28] 2026-01-14 10:31:25,586 [wrapper] cleanup supervisor_pilot 10914 18562
[2026-01-14 11:31:28] 2026-01-14 10:31:25,653 [wrapper] Test setup, not cleaning
[2026-01-14 11:31:28] 2026-01-14 10:31:25,710 [wrapper] apfmon messages muted
[2026-01-14 11:31:28] 2026-01-14 10:31:25,829 [wrapper] ==== wrapper stdout END ====
[2026-01-14 11:31:28] 2026-01-14 10:31:25,932 [wrapper] ==== wrapper stderr END ====
[2026-01-14 11:31:28]  *** Error codes and diagnostics ***
[2026-01-14 11:31:28]     "exeErrorCode": 0,
[2026-01-14 11:31:28]     "exeErrorDiag": "",
[2026-01-14 11:31:28]     "pilotErrorCode": 0,
[2026-01-14 11:31:28]     "pilotErrorDiag": "",
[2026-01-14 11:31:28]  *** Listing of results directory ***
[2026-01-14 11:31:28] total 735596
[2026-01-14 11:31:28] -rw-r--r--. 1 boinc boinc      5112 Jan 14 02:50 queuedata.json
[2026-01-14 11:31:28] -rw-r--r--. 1 boinc boinc    579449 Jan 14 02:50 pilot3.tar.gz
[2026-01-14 11:31:28] -rwx------. 1 boinc boinc     36322 Jan 14 02:50 runpilot2-wrapper.sh
[2026-01-14 11:31:28] -rw-r--r--. 1 boinc boinc       100 Jan 14 08:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 11:31:28] -rwxr-xr-x. 1 boinc boinc      7986 Jan 14 08:29 run_atlas
[2026-01-14 11:31:28] -rw-r--r--. 1 boinc boinc       105 Jan 14 08:29 job.xml
[2026-01-14 11:31:28] -rw-r--r--. 1 boinc boinc      6390 Jan 14 08:29 init_data.xml
[2026-01-14 11:31:28] -rw-r--r--. 2 boinc boinc 595307034 Jan 14 08:29 EVNT.32794306._000397.pool.root.1
[2026-01-14 11:31:28] -rw-r--r--. 2 boinc boinc     15847 Jan 14 08:29 start_atlas.sh
[2026-01-14 11:31:28] drwxrwx--x. 2 boinc boinc        68 Jan 14 08:29 shared
[2026-01-14 11:31:28] -rw-r--r--. 2 boinc boinc    592392 Jan 14 08:29 input.tar.gz
[2026-01-14 11:31:28] -rw-r--r--. 1 boinc boinc         0 Jan 14 08:29 boinc_lockfile
[2026-01-14 11:31:28] -rw-r--r--. 1 boinc boinc      2505 Jan 14 08:29 pandaJob.out
[2026-01-14 11:31:28] -rw-------. 1 boinc boinc    997226 Jan 14 08:33 agis_schedconf.cvmfs.json
[2026-01-14 11:31:28] -rw-------. 1 boinc boinc   1516246 Jan 14 08:33 agis_ddmendpoints.agis.ALL.json
[2026-01-14 11:31:28] drwx------. 5 boinc boinc      4096 Jan 14 08:33 pilot3
[2026-01-14 11:31:28] -rw-------. 1 boinc boinc 150365829 Jan 14 11:27 HITS.48215263._009922.pool.root.1
[2026-01-14 11:31:28] -rw-r--r--. 1 boinc boinc       532 Jan 14 11:27 boinc_task_state.xml
[2026-01-14 11:31:28] -rw-------. 1 boinc boinc      1012 Jan 14 11:28 memory_monitor_summary.json
[2026-01-14 11:31:28] -rw-------. 1 boinc boinc    414211 Jan 14 11:28 log.48215263._009922.job.log.tgz.1
[2026-01-14 11:31:28] -rw-------. 1 boinc boinc        95 Jan 14 11:30 pilot_heartbeat.json
[2026-01-14 11:31:28] -rw-------. 1 boinc boinc      7767 Jan 14 11:30 heartbeat.json
[2026-01-14 11:31:28] -rw-r--r--. 1 boinc boinc        28 Jan 14 11:31 wrapper_checkpoint.txt
[2026-01-14 11:31:28] -rw-r--r--. 1 boinc boinc      8192 Jan 14 11:31 boinc_mmap_file
[2026-01-14 11:31:28] -rw-------. 1 boinc boinc      4885 Jan 14 11:31 pilotlog.txt
[2026-01-14 11:31:28] -rw-------. 1 boinc boinc   1419733 Jan 14 11:31 log.48215263._009922.job.log.1
[2026-01-14 11:31:28] -rw-------. 1 boinc boinc       357 Jan 14 11:31 output.list
[2026-01-14 11:31:28] -rw-r--r--. 1 boinc boinc       620 Jan 14 11:31 runtime_log
[2026-01-14 11:31:28] -rw-------. 1 boinc boinc   1853440 Jan 14 11:31 result.tar.gz
[2026-01-14 11:31:28] -rw-r--r--. 1 boinc boinc      8833 Jan 14 11:31 runtime_log.err
[2026-01-14 11:31:28] -rw-------. 1 boinc boinc       655 Jan 14 11:31 QZwMDm4C5z8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmZMjKDmbsZMWn.diag
[2026-01-14 11:31:28] -rw-r--r--. 1 boinc boinc     20713 Jan 14 11:31 stderr.txt
[2026-01-14 11:31:28] HITS file was successfully produced:
[2026-01-14 11:31:28] -rw-------. 1 boinc boinc 150365829 Jan 14 11:27 shared/HITS.pool.root.1
[2026-01-14 11:31:28]  *** Contents of shared directory: ***
[2026-01-14 11:31:28] total 730608
[2026-01-14 11:31:28] -rw-r--r--. 2 boinc boinc 595307034 Jan 14 08:29 ATLAS.root_0
[2026-01-14 11:31:28] -rw-r--r--. 2 boinc boinc     15847 Jan 14 08:29 start_atlas.sh
[2026-01-14 11:31:28] -rw-r--r--. 2 boinc boinc    592392 Jan 14 08:29 input.tar.gz
[2026-01-14 11:31:28] -rw-------. 1 boinc boinc 150365829 Jan 14 11:27 HITS.pool.root.1
[2026-01-14 11:31:28] -rw-------. 1 boinc boinc   1853440 Jan 14 11:31 result.tar.gz
11:31:30 (14815): run_atlas exited; CPU time 36200.827906
11:31:30 (14815): called boinc_finish(0)

</stderr_txt>
]]>

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