Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:29:32 (2685987): wrapper (7.7.26015): starting
17:29:32 (2685987): wrapper: running run_atlas (--nthreads 4)
[2026-01-14 17:29:32] Arguments: --nthreads 4
[2026-01-14 17:29:32] Threads: 4
[2026-01-14 17:29:32] Checking for CVMFS
[2026-01-14 17:29:32] No cvmfs_config command found, will try listing directly
[2026-01-14 17:29:32] CVMFS is ok
[2026-01-14 17:29:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 17:29:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 17:29:32] Further information can be found at the LHC@home message board.
[2026-01-14 17:29:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 17:29:32] Checking for apptainer binary...
[2026-01-14 17:29:32] which: no apptainer in ((null))
[2026-01-14 17:29:32] apptainer is not installed, using version from CVMFS
[2026-01-14 17:29:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 17:29:32] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot92/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-01-14 17:29:32] apptainer works
[2026-01-14 17:29:32] Set ATHENA_PROC_NUMBER=4
[2026-01-14 17:29:32] Set ATHENA_CORE_NUMBER=4
[2026-01-14 17:29:32] Starting ATLAS job with PandaID=6969268586
[2026-01-14 17:29:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot92/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 19:21:57]  *** The last 200 lines of the pilot log: ***
[2026-01-14 19:21:57] 2026-01-14 18:20:16,055 | INFO     | time since job start (6629s) is within the limit (349056.0s)
[2026-01-14 19:21:57] 2026-01-14 18:20:17,470 | INFO     | monitor loop #448: job 0:6969268586 is in state 'finished'
[2026-01-14 19:21:57] 2026-01-14 18:20:17,470 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 19:21:57] 2026-01-14 18:20:18,065 | INFO     | time since job start (6631s) is within the limit (349056.0s)
[2026-01-14 19:21:57] 2026-01-14 18:20:19,976 | INFO     | monitor loop #449: job 0:6969268586 is in state 'finished'
[2026-01-14 19:21:57] 2026-01-14 18:20:19,978 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 19:21:57] 2026-01-14 18:20:20,154 | INFO     | PID=2689970 has CPU usage=23.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-14 19:21:57] 2026-01-14 18:20:20,155 | INFO     | .. there are 11 such processes running
[2026-01-14 19:21:57] 2026-01-14 18:20:21,158 | INFO     | time since job start (6634s) is within the limit (349056.0s)
[2026-01-14 19:21:57] 2026-01-14 18:20:22,060 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-14 19:21:57] 2026-01-14 18:20:22,081 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2664.1256171875
[2026-01-14 19:21:57] 2026-01-14 18:20:22,107 | INFO     | using path: /scratch/boinc/var/slot92/slots/0/PanDA_Pilot-6969268586/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 19:21:57] 2026-01-14 18:20:22,108 | INFO     | extracted standard info from prmon json
[2026-01-14 19:21:57] 2026-01-14 18:20:22,108 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 19:21:57] 2026-01-14 18:20:22,109 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 19:21:57] 2026-01-14 18:20:22,109 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 19:21:57] 2026-01-14 18:20:22,109 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 19:21:57] 2026-01-14 18:20:22,111 | INFO     | fitting pss+swap vs Time
[2026-01-14 19:21:57] 2026-01-14 18:20:22,112 | INFO     | sum of square deviations: 390582207.0
[2026-01-14 19:21:57] 2026-01-14 18:20:22,113 | INFO     | sum of deviations: -10180983082.0
[2026-01-14 19:21:57] 2026-01-14 18:20:22,113 | INFO     | mean x: 1768411486.5
[2026-01-14 19:21:57] 2026-01-14 18:20:22,116 | INFO     | mean y: 2410436.592592593
[2026-01-14 19:21:57] 2026-01-14 18:20:22,116 | INFO     | intersect: 46098128836.972694
[2026-01-14 19:21:57] 2026-01-14 18:20:22,116 | INFO     | chi2: 1.3969845767785638
[2026-01-14 19:21:57] 2026-01-14 18:20:22,116 | INFO     | sum of square deviations: 338804492.0
[2026-01-14 19:21:57] 2026-01-14 18:20:22,117 | INFO     | sum of deviations: -9242001237.0
[2026-01-14 19:21:57] 2026-01-14 18:20:22,117 | INFO     | mean x: 1768411334.0
[2026-01-14 19:21:57] 2026-01-14 18:20:22,117 | INFO     | mean y: 2413204.174757282
[2026-01-14 19:21:57] 2026-01-14 18:20:22,117 | INFO     | intersect: 48241619360.723656
[2026-01-14 19:21:57] 2026-01-14 18:20:22,117 | INFO     | chi2: 1.3935929970344627
[2026-01-14 19:21:57] 2026-01-14 18:20:22,118 | INFO     | current chi2=1.3935929970344627 (change=0.24277861047843852 %)
[2026-01-14 19:21:57] 2026-01-14 18:20:22,118 | INFO     | right removable region: 102
[2026-01-14 19:21:57] 2026-01-14 18:20:22,118 | INFO     | sum of square deviations: 338804492.0
[2026-01-14 19:21:57] 2026-01-14 18:20:22,118 | INFO     | sum of deviations: -20985900394.000008
[2026-01-14 19:21:57] 2026-01-14 18:20:22,119 | INFO     | mean x: 1768411639.0
[2026-01-14 19:21:57] 2026-01-14 18:20:22,119 | INFO     | mean y: 2441142.145631068
[2026-01-14 19:21:57] 2026-01-14 18:20:22,119 | INFO     | intersect: 109539685741.737
[2026-01-14 19:21:57] 2026-01-14 18:20:22,119 | INFO     | chi2: 0.12550153089363844
[2026-01-14 19:21:57] 2026-01-14 18:20:22,119 | INFO     | current chi2=0.12550153089363844 (change=91.0162550840007 %)
[2026-01-14 19:21:57] 2026-01-14 18:20:22,119 | INFO     | sum of square deviations: 291817564.5
[2026-01-14 19:21:57] 2026-01-14 18:20:22,120 | INFO     | sum of deviations: -16464195972.0
[2026-01-14 19:21:57] 2026-01-14 18:20:22,120 | INFO     | mean x: 1768411791.5
[2026-01-14 19:21:57] 2026-01-14 18:20:22,120 | INFO     | mean y: 2426436.897959184
[2026-01-14 19:21:57] 2026-01-14 18:20:22,120 | INFO     | intersect: 99775304551.13362
[2026-01-14 19:21:57] 2026-01-14 18:20:22,120 | INFO     | chi2: 0.11501383515915273
[2026-01-14 19:21:57] 2026-01-14 18:20:22,121 | INFO     | current chi2=0.11501383515915273 (change=8.356627731795522 %)
[2026-01-14 19:21:57] 2026-01-14 18:20:22,121 | INFO     | left removable region: 20
[2026-01-14 19:21:57] 2026-01-14 18:20:22,121 | INFO     | sum of square deviations: 170944600.5
[2026-01-14 19:21:57] 2026-01-14 18:20:22,121 | INFO     | sum of deviations: -6081744194.500001
[2026-01-14 19:21:57] 2026-01-14 18:20:22,121 | INFO     | mean x: 1768411913.5
[2026-01-14 19:21:57] 2026-01-14 18:20:22,121 | INFO     | mean y: 2391682.426829268
[2026-01-14 19:21:57] 2026-01-14 18:20:22,122 | INFO     | intersect: 62917680360.48754
[2026-01-14 19:21:57] 2026-01-14 18:20:22,122 | INFO     | chi2: 0.036375729525507286
[2026-01-14 19:21:57] 2026-01-14 18:20:22,122 | INFO     | current memory leak: -35.58 B/s (using 82 data points, chi2=0.04)
[2026-01-14 19:21:57] 2026-01-14 18:20:22,122 | INFO     | could have reported an average CPU frequency of 2669 MHz (7 samples)
[2026-01-14 19:21:57] 2026-01-14 18:20:22,123 | INFO     | ..............................
[2026-01-14 19:21:57] 2026-01-14 18:20:22,123 | INFO     | . Timing measurements:
[2026-01-14 19:21:57] 2026-01-14 18:20:22,123 | INFO     | . get job = 0 s
[2026-01-14 19:21:57] 2026-01-14 18:20:22,123 | INFO     | . initial setup = 1 s
[2026-01-14 19:21:57] 2026-01-14 18:20:22,123 | INFO     | . payload setup = 8 s
[2026-01-14 19:21:57] 2026-01-14 18:20:22,123 | INFO     | . stage-in = 0 s
[2026-01-14 19:21:57] 2026-01-14 18:20:22,123 | INFO     | . payload execution = 6592 s
[2026-01-14 19:21:57] 2026-01-14 18:20:22,123 | INFO     | . stage-out = 0 s
[2026-01-14 19:21:57] 2026-01-14 18:20:22,123 | INFO     | . log creation = 0 s
[2026-01-14 19:21:57] 2026-01-14 18:20:22,123 | INFO     | ..............................
[2026-01-14 19:21:57] 2026-01-14 18:20:22,229 | INFO     | 
[2026-01-14 19:21:57] 2026-01-14 18:20:22,230 | INFO     | job summary report
[2026-01-14 19:21:57] 2026-01-14 18:20:22,230 | INFO     | --------------------------------------------------
[2026-01-14 19:21:57] 2026-01-14 18:20:22,230 | INFO     | PanDA job id: 6969268586
[2026-01-14 19:21:57] 2026-01-14 18:20:22,230 | INFO     | task id: 48215263
[2026-01-14 19:21:57] 2026-01-14 18:20:22,230 | INFO     | errors: (none)
[2026-01-14 19:21:57] 2026-01-14 18:20:22,230 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 19:21:57] 2026-01-14 18:20:22,230 | INFO     | pilot state: finished 
[2026-01-14 19:21:57] 2026-01-14 18:20:22,230 | INFO     | transexitcode: 0
[2026-01-14 19:21:57] 2026-01-14 18:20:22,230 | INFO     | exeerrorcode: 0
[2026-01-14 19:21:57] 2026-01-14 18:20:22,230 | INFO     | exeerrordiag: 
[2026-01-14 19:21:57] 2026-01-14 18:20:22,230 | INFO     | exitcode: 0
[2026-01-14 19:21:57] 2026-01-14 18:20:22,231 | INFO     | exitmsg: OK
[2026-01-14 19:21:57] 2026-01-14 18:20:22,231 | INFO     | cpuconsumptiontime: 24897 s
[2026-01-14 19:21:57] 2026-01-14 18:20:22,231 | INFO     | nevents: 400
[2026-01-14 19:21:57] 2026-01-14 18:20:22,231 | INFO     | neventsw: 0
[2026-01-14 19:21:57] 2026-01-14 18:20:22,231 | INFO     | pid: 2698203
[2026-01-14 19:21:57] 2026-01-14 18:20:22,231 | INFO     | pgrp: 2698203
[2026-01-14 19:21:57] 2026-01-14 18:20:22,231 | INFO     | corecount: 4
[2026-01-14 19:21:57] 2026-01-14 18:20:22,231 | INFO     | event service: False
[2026-01-14 19:21:57] 2026-01-14 18:20:22,231 | INFO     | sizes: {0: 2283956, 8: 2284218, 11: 2284246, 6605: 2311536, 6606: 2311535, 6608: 2320795, 6616: 2320933}
[2026-01-14 19:21:57] 2026-01-14 18:20:22,231 | INFO     | --------------------------------------------------
[2026-01-14 19:21:57] 2026-01-14 18:20:22,231 | INFO     | 
[2026-01-14 19:21:57] 2026-01-14 18:20:22,232 | INFO     | executing command: ls -lF /scratch/boinc/var/slot92/slots/0
[2026-01-14 19:21:57] 2026-01-14 18:20:22,269 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 19:21:57] 2026-01-14 18:20:22,269 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 19:21:57] 2026-01-14 18:20:22,269 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 19:21:57] 2026-01-14 18:20:22,269 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 19:21:57] 2026-01-14 18:20:22,269 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 19:21:57] 2026-01-14 18:20:22,269 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 19:21:57] 2026-01-14 18:20:22,269 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 19:21:57] 2026-01-14 18:20:22,270 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 19:21:57] 2026-01-14 18:20:22,270 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 19:21:57] 2026-01-14 18:20:22,270 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 19:21:57] 2026-01-14 18:20:22,270 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 19:21:57] 2026-01-14 18:20:22,270 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 19:21:57] 2026-01-14 18:20:22,270 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 19:21:57] 2026-01-14 18:20:22,270 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 19:21:57] 2026-01-14 18:20:22,270 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 19:21:57] 2026-01-14 18:20:22,270 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 19:21:57] 2026-01-14 18:20:22,270 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 19:21:57] 2026-01-14 18:20:22,270 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 19:21:57] 2026-01-14 18:20:22,271 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 19:21:57] 2026-01-14 18:20:22,271 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 19:21:57] 2026-01-14 18:20:22,271 | INFO     | job 6969268586 has completed (purged errors)
[2026-01-14 19:21:57] 2026-01-14 18:20:22,271 | INFO     | overall cleanup function is called
[2026-01-14 19:21:57] 2026-01-14 18:20:23,280 | INFO     | --- collectZombieJob: --- 10, [2698203]
[2026-01-14 19:21:57] 2026-01-14 18:20:23,280 | INFO     | zombie collector waiting for pid 2698203
[2026-01-14 19:21:57] 2026-01-14 18:20:23,280 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 19:21:57] 2026-01-14 18:20:23,280 | INFO     | collected zombie processes
[2026-01-14 19:21:57] 2026-01-14 18:20:23,280 | INFO     | will attempt to kill all subprocesses of pid=2698203
[2026-01-14 19:21:57] 2026-01-14 18:20:24,136 | INFO     | process IDs to be killed: [2698203] (in reverse order)
[2026-01-14 19:21:57] 2026-01-14 18:20:24,443 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 19:21:57] 2026-01-14 18:20:24,443 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 19:21:57] 2026-01-14 18:20:24,479 | INFO     | did not find any defunct processes belonging to 2698203
[2026-01-14 19:21:57] 2026-01-14 18:20:24,511 | INFO     | did not find any defunct processes belonging to 2698203
[2026-01-14 19:21:57] 2026-01-14 18:20:24,511 | INFO     | ready for new job
[2026-01-14 19:21:57] 2026-01-14 18:20:24,511 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 19:21:57] 2026-01-14 18:20:24,514 | INFO     | ***************************************
[2026-01-14 19:21:57] 2026-01-14 18:20:24,514 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 19:21:57] 2026-01-14 18:20:24,514 | INFO     | ***************************************
[2026-01-14 19:21:57] 2026-01-14 18:20:24,514 | INFO     | 
[2026-01-14 19:21:57] 2026-01-14 18:20:24,523 | INFO     | architecture information:
[2026-01-14 19:21:57] 2026-01-14 18:20:24,523 | INFO     | executing command: cat /etc/os-release
[2026-01-14 19:21:57] 2026-01-14 18:20:24,550 | INFO     | cat /etc/os-release:
[2026-01-14 19:21:57] NAME="CentOS Linux"
[2026-01-14 19:21:57] VERSION="7 (Core)"
[2026-01-14 19:21:57] ID="centos"
[2026-01-14 19:21:57] ID_LIKE="rhel fedora"
[2026-01-14 19:21:57] VERSION_ID="7"
[2026-01-14 19:21:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 19:21:57] ANSI_COLOR="0;31"
[2026-01-14 19:21:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 19:21:57] HOME_URL="https://www.centos.org/"
[2026-01-14 19:21:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 19:21:57] 
[2026-01-14 19:21:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 19:21:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 19:21:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 19:21:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 19:21:57] 
[2026-01-14 19:21:57] 2026-01-14 18:20:24,550 | INFO     | ***************************************
[2026-01-14 19:21:57] 2026-01-14 18:20:25,053 | INFO     | executing command: df -mP /scratch/boinc/var/slot92/slots/0
[2026-01-14 19:21:57] 2026-01-14 18:20:25,080 | INFO     | sufficient remaining disk space (3284790149120 B)
[2026-01-14 19:21:57] 2026-01-14 18:20:25,081 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 19:21:57] 2026-01-14 18:20:25,081 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 19:21:57] 2026-01-14 18:20:25,081 | INFO     | update_server=False
[2026-01-14 19:21:57] 2026-01-14 18:20:25,081 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 19:21:57] 2026-01-14 18:20:25,081 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 19:21:57] 2026-01-14 18:20:25,244 | INFO     | all job control threads have been joined
[2026-01-14 19:21:57] 2026-01-14 18:20:25,336 | INFO     | all payload control threads have been joined
[2026-01-14 19:21:57] 2026-01-14 18:20:25,570 | INFO     | all data control threads have been joined
[2026-01-14 19:21:57] 2026-01-14 18:20:25,995 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 19:21:57] 2026-01-14 18:20:25,995 | INFO     | aborting loop
[2026-01-14 19:21:57] 2026-01-14 18:20:26,084 | INFO     | [job] retrieve thread has finished
[2026-01-14 19:21:57] 2026-01-14 18:20:26,130 | INFO     | [payload] failed_post thread has finished
[2026-01-14 19:21:57] 2026-01-14 18:20:26,250 | INFO     | [job] control thread has finished
[2026-01-14 19:21:57] 2026-01-14 18:20:26,341 | INFO     | [payload] control thread has finished
[2026-01-14 19:21:57] 2026-01-14 18:20:26,413 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 19:21:57] 2026-01-14 18:20:26,546 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 19:21:57] 2026-01-14 18:20:26,576 | INFO     | [data] control thread has finished
[2026-01-14 19:21:57] 2026-01-14 18:20:26,645 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 19:21:57] 2026-01-14 18:20:26,757 | INFO     | [payload] validate_post thread has finished
[2026-01-14 19:21:57] 2026-01-14 18:20:27,000 | INFO     | [job] job monitor thread has finished
[2026-01-14 19:21:57] 2026-01-14 18:20:27,207 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 19:21:57] 2026-01-14 18:20:27,240 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 19:21:57] 2026-01-14 18:20:27,546 | INFO     | [data] copytool_in thread has finished
[2026-01-14 19:21:57] 2026-01-14 18:20:27,551 | INFO     | [job] validate thread has finished
[2026-01-14 19:21:57] 2026-01-14 18:20:27,588 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 19:21:57] 2026-01-14 18:20:28,245 | INFO     | [job] queue monitor thread has finished
[2026-01-14 19:21:57] 2026-01-14 18:20:28,551 | INFO     | [data] copytool_out thread has finished
[2026-01-14 19:21:57] 2026-01-14 18:20:29,087 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 19:21:57] 2026-01-14 18:20:55,153 | INFO     | PID=2689970 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-14 19:21:57] 2026-01-14 18:20:55,154 | INFO     | .. there are 11 such processes running
[2026-01-14 19:21:57] 2026-01-14 18:20:55,154 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 19:21:57] 2026-01-14 18:20:55,155 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 19:21:57] 2026-01-14 18:20:55,155 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 19:21:57] 2026-01-14 18:20:57,941 | INFO     | [monitor] cgroup control has ended
[2026-01-14 19:21:57] 2026-01-14 18:20:59,133 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23255074998080)>', '<ExcThread(monitor, started 23254840350464)>']
[2026-01-14 19:21:57] 2026-01-14 18:20:59,175 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 19:21:57] 2026-01-14 18:20:59,175 | INFO     | [monitor] control thread has ended
[2026-01-14 19:21:57] 2026-01-14 18:21:04,158 | INFO     | all workflow threads have been joined
[2026-01-14 19:21:57] 2026-01-14 18:21:04,158 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 19:21:57] 2026-01-14 18:21:04,158 | INFO     | traces error code: 0
[2026-01-14 19:21:57] 2026-01-14 18:21:04,159 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 19:21:57] 2026-01-14 18:21:04,327 [wrapper] ==== pilot stdout END ====
[2026-01-14 19:21:57] 2026-01-14 18:21:04,332 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 19:21:57] 2026-01-14 18:21:04,335 [wrapper] pilotpid: 2689970
[2026-01-14 19:21:57] 2026-01-14 18:21:04,339 [wrapper] Pilot exit status: 0
[2026-01-14 19:21:57] 2026-01-14 18:21:04,355 [wrapper] pandaids: 6969268586
[2026-01-14 19:21:57] 2026-01-14 18:21:04,540 [wrapper] cleanup supervisor_pilot 3026572 2689971
[2026-01-14 19:21:57] 2026-01-14 18:21:04,544 [wrapper] Test setup, not cleaning
[2026-01-14 19:21:57] 2026-01-14 18:21:04,548 [wrapper] apfmon messages muted
[2026-01-14 19:21:57] 2026-01-14 18:21:04,552 [wrapper] ==== wrapper stdout END ====
[2026-01-14 19:21:57] 2026-01-14 18:21:04,555 [wrapper] ==== wrapper stderr END ====
[2026-01-14 19:21:57]  *** Error codes and diagnostics ***
[2026-01-14 19:21:57]     "exeErrorCode": 0,
[2026-01-14 19:21:57]     "exeErrorDiag": "",
[2026-01-14 19:21:57]     "pilotErrorCode": 0,
[2026-01-14 19:21:57]     "pilotErrorDiag": "",
[2026-01-14 19:21:57]  *** Listing of results directory ***
[2026-01-14 19:21:57] total 737396
[2026-01-14 19:21:57] -rwx------ 1 boinc boinc     36322 Jan 13 22:59 runpilot2-wrapper.sh
[2026-01-14 19:21:57] -rw-r--r-- 1 boinc boinc    579449 Jan 13 23:05 pilot3.tar.gz
[2026-01-14 19:21:57] -rw-r--r-- 1 boinc boinc      5112 Jan 13 23:12 queuedata.json
[2026-01-14 19:21:57] -rw-r--r-- 1 boinc boinc       100 Jan 14 17:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 19:21:57] -rwxr-xr-x 1 boinc boinc      7986 Jan 14 17:29 run_atlas
[2026-01-14 19:21:57] -rw-r--r-- 1 boinc boinc       105 Jan 14 17:29 job.xml
[2026-01-14 19:21:57] -rw-r--r-- 2 boinc boinc 594244365 Jan 14 17:29 EVNT.32794306._000236.pool.root.1
[2026-01-14 19:21:57] -rw-r--r-- 1 boinc boinc      6690 Jan 14 17:29 init_data.xml
[2026-01-14 19:21:57] -rw-r--r-- 2 boinc boinc     15847 Jan 14 17:29 start_atlas.sh
[2026-01-14 19:21:57] drwxrwx--x 2 boinc boinc      4096 Jan 14 17:29 shared
[2026-01-14 19:21:57] -rw-r--r-- 2 boinc boinc    592389 Jan 14 17:29 input.tar.gz
[2026-01-14 19:21:57] -rw-r--r-- 1 boinc boinc         0 Jan 14 17:29 boinc_lockfile
[2026-01-14 19:21:57] -rw-r--r-- 1 boinc boinc      2505 Jan 14 17:29 pandaJob.out
[2026-01-14 19:21:57] -rw------- 1 boinc boinc    997956 Jan 14 17:29 agis_schedconf.cvmfs.json
[2026-01-14 19:21:57] -rw------- 1 boinc boinc   1516246 Jan 14 17:29 agis_ddmendpoints.agis.ALL.json
[2026-01-14 19:21:57] drwx------ 5 boinc boinc      4096 Jan 14 17:29 pilot3
[2026-01-14 19:21:57] -rw------- 1 boinc boinc 154459150 Jan 14 19:19 HITS.48215263._005894.pool.root.1
[2026-01-14 19:21:57] -rw-r--r-- 1 boinc boinc       529 Jan 14 19:19 boinc_task_state.xml
[2026-01-14 19:21:57] -rw------- 1 boinc boinc      1040 Jan 14 19:20 memory_monitor_summary.json
[2026-01-14 19:21:57] -rw------- 1 boinc boinc    300487 Jan 14 19:20 log.48215263._005894.job.log.tgz.1
[2026-01-14 19:21:57] -rw------- 1 boinc boinc      7782 Jan 14 19:20 heartbeat.json
[2026-01-14 19:21:57] -rw------- 1 boinc boinc        95 Jan 14 19:20 pilot_heartbeat.json
[2026-01-14 19:21:57] -rw------- 1 boinc boinc      4835 Jan 14 19:21 pilotlog.txt
[2026-01-14 19:21:57] -rw------- 1 boinc boinc    934299 Jan 14 19:21 log.48215263._005894.job.log.1
[2026-01-14 19:21:57] -rw------- 1 boinc boinc       357 Jan 14 19:21 output.list
[2026-01-14 19:21:57] -rw-r--r-- 1 boinc boinc       620 Jan 14 19:21 runtime_log
[2026-01-14 19:21:57] -rw------- 1 boinc boinc   1249280 Jan 14 19:21 result.tar.gz
[2026-01-14 19:21:57] -rw-r--r-- 1 boinc boinc      9205 Jan 14 19:21 runtime_log.err
[2026-01-14 19:21:57] -rw------- 1 boinc boinc       663 Jan 14 19:21 C7LKDm9a1z8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmrliKDmzTNXHo.diag
[2026-01-14 19:21:57] -rw-r--r-- 1 boinc boinc        27 Jan 14 19:21 wrapper_checkpoint.txt
[2026-01-14 19:21:57] -rw-r--r-- 1 boinc boinc      8192 Jan 14 19:21 boinc_mmap_file
[2026-01-14 19:21:57] -rw-r--r-- 1 boinc boinc     21165 Jan 14 19:21 stderr.txt
[2026-01-14 19:21:57] HITS file was successfully produced:
[2026-01-14 19:21:58] -rw------- 1 boinc boinc 154459150 Jan 14 19:19 shared/HITS.pool.root.1
[2026-01-14 19:21:58]  *** Contents of shared directory: ***
[2026-01-14 19:21:58] total 732984
[2026-01-14 19:21:58] -rw-r--r-- 2 boinc boinc 594244365 Jan 14 17:29 ATLAS.root_0
[2026-01-14 19:21:58] -rw-r--r-- 2 boinc boinc     15847 Jan 14 17:29 start_atlas.sh
[2026-01-14 19:21:58] -rw-r--r-- 2 boinc boinc    592389 Jan 14 17:29 input.tar.gz
[2026-01-14 19:21:58] -rw------- 1 boinc boinc 154459150 Jan 14 19:19 HITS.pool.root.1
[2026-01-14 19:21:58] -rw------- 1 boinc boinc   1249280 Jan 14 19:21 result.tar.gz
19:21:59 (2685987): run_atlas exited; CPU time 25305.965903
19:21:59 (2685987): called boinc_finish(0)

</stderr_txt>
]]>

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