Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:56:59 (30364): wrapper (7.7.26015): starting
22:56:59 (30364): wrapper: running run_atlas (--nthreads 12)
[2026-01-13 22:56:59] Arguments: --nthreads 12
[2026-01-13 22:56:59] Threads: 12
[2026-01-13 22:56:59] Checking for CVMFS
[2026-01-13 22:56:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-13 22:56:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-13 22:56:59] Running cvmfs_config stat atlas.cern.ch
[2026-01-13 22:57:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-13 22:57:00] 2.11.2.0 2925 357731 99632 155116 0 59 11449891 20275200 1 130560 1 148693973 99.954 20842182 16087 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-13 22:57:00] CVMFS is ok
[2026-01-13 22:57:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 22:57:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 22:57:00] Further information can be found at the LHC@home message board.
[2026-01-13 22:57:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 22:57:00] Checking for apptainer binary...
[2026-01-13 22:57:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-13 22:57:00] Running /usr/bin/apptainer --version
[2026-01-13 22:57:00] apptainer version 1.3.2-1.el7
[2026-01-13 22:57:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 22:57:01] c-205-10.aglt2.org
[2026-01-13 22:57:01] apptainer works
[2026-01-13 22:57:01] Set ATHENA_PROC_NUMBER=12
[2026-01-13 22:57:01] Set ATHENA_CORE_NUMBER=12
[2026-01-13 22:57:01] Starting ATLAS job with PandaID=6969261473
[2026-01-13 22:57:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 23:45:25]  *** The last 200 lines of the pilot log: ***
[2026-01-13 23:45:25]  lfn=log.48215263._002742.job.log.tgz.1
[2026-01-13 23:45:25]  mtime=0
[2026-01-13 23:45:25]  protocol_id=None
[2026-01-13 23:45:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-13 23:45:25]  replicas=None
[2026-01-13 23:45:25]  scope=mc23_13p6TeV
[2026-01-13 23:45:25]  status=None
[2026-01-13 23:45:25]  status_code=0
[2026-01-13 23:45:25]  storage_token=
[2026-01-13 23:45:25]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6969261473/log.48215263._002742.job.log.tgz.1
[2026-01-13 23:45:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ac/d0/log.48215263._002742.job.log.tgz.1
[2026-01-13 23:45:25]  workdir=None
[2026-01-13 23:45:25] ]
[2026-01-13 23:45:25] 2026-01-14 04:44:57,994 | INFO     | transferring file log.48215263._002742.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6969261473/log.48215263._002742.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-13 23:45:25] 2026-01-14 04:44:57,994 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6969261473/log.48215263._002742.job.log.tgz.1 /tmp/boinchome/slots/0/log.48215263._002742.job
[2026-01-13 23:45:25] 2026-01-14 04:44:58,015 | INFO     | adding to output.list: log.48215263._002742.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ac/d0/log.48215263._002742.job.log.tg
[2026-01-13 23:45:25] 2026-01-14 04:44:58,016 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-13 23:45:25] 2026-01-14 04:44:58,016 | INFO     | summary of transferred files:
[2026-01-13 23:45:25] 2026-01-14 04:44:58,017 | INFO     |  -- lfn=log.48215263._002742.job.log.tgz.1, status_code=0, status=transferred
[2026-01-13 23:45:25] 2026-01-14 04:44:58,017 | INFO     | stage-out finished correctly
[2026-01-13 23:45:25] 2026-01-14 04:44:58,100 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-13 23:45:25] 2026-01-14 04:44:58,268 | INFO     | job 6969261473 has state=finished
[2026-01-13 23:45:25] 2026-01-14 04:44:58,269 | INFO     | preparing for final server update for job 6969261473 in state='finished'
[2026-01-13 23:45:25] 2026-01-14 04:44:58,343 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-13 23:45:25] 2026-01-14 04:44:58,343 | INFO     | this job has now completed (state=finished)
[2026-01-13 23:45:25] 2026-01-14 04:44:58,344 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-13 23:45:25] 2026-01-14 04:44:58,344 | INFO     | log transfer has been attempted: DONE
[2026-01-13 23:45:25] 2026-01-14 04:44:58,344 | INFO     | job 6969261473 has finished - writing final server update
[2026-01-13 23:45:25] 2026-01-14 04:44:58,344 | INFO     | total number of processed events: 400 (read)
[2026-01-13 23:45:25] 2026-01-14 04:44:58,345 | INFO     | executing command: lscpu
[2026-01-13 23:45:25] 2026-01-14 04:44:58,370 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-13 23:45:25] 2026-01-14 04:44:58,739 | INFO     | time since job start (2862s) is within the limit (349056.0s)
[2026-01-13 23:45:25] 2026-01-14 04:44:59,879 | INFO     | monitor loop #217: job 0:6969261473 is in state 'finished'
[2026-01-13 23:45:25] 2026-01-14 04:44:59,879 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 23:45:25] 2026-01-14 04:45:00,745 | INFO     | time since job start (2864s) is within the limit (349056.0s)
[2026-01-13 23:45:25] 2026-01-14 04:45:02,382 | INFO     | monitor loop #218: job 0:6969261473 is in state 'finished'
[2026-01-13 23:45:25] 2026-01-14 04:45:02,382 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 23:45:25] 2026-01-14 04:45:02,750 | INFO     | time since job start (2866s) is within the limit (349056.0s)
[2026-01-13 23:45:25] 2026-01-14 04:45:04,433 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-13 23:45:25] 2026-01-14 04:45:04,437 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1762.3333333333333
[2026-01-13 23:45:25] 2026-01-14 04:45:04,438 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6969261473/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 23:45:25] 2026-01-14 04:45:04,439 | INFO     | extracted standard info from prmon json
[2026-01-13 23:45:25] 2026-01-14 04:45:04,439 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 23:45:25] 2026-01-14 04:45:04,439 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 23:45:25] 2026-01-14 04:45:04,439 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 23:45:25] 2026-01-14 04:45:04,439 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 23:45:25] 2026-01-14 04:45:04,441 | INFO     | fitting pss+swap vs Time
[2026-01-13 23:45:25] 2026-01-14 04:45:04,441 | INFO     | sum of square deviations: 19832930.0
[2026-01-13 23:45:25] 2026-01-14 04:45:04,441 | INFO     | sum of deviations: -3190517526.0
[2026-01-13 23:45:25] 2026-01-14 04:45:04,441 | INFO     | mean x: 1768364559.5
[2026-01-13 23:45:25] 2026-01-14 04:45:04,441 | INFO     | mean y: 2851662.1
[2026-01-13 23:45:25] 2026-01-14 04:45:04,441 | INFO     | intersect: 284479130227.1945
[2026-01-13 23:45:25] 2026-01-14 04:45:04,442 | INFO     | chi2: 0.02906187011922838
[2026-01-13 23:45:25] 2026-01-14 04:45:04,442 | INFO     | current memory leak: -160.87 B/s (using 40 data points, chi2=0.03)
[2026-01-13 23:45:25] 2026-01-14 04:45:04,442 | INFO     | could have reported an average CPU frequency of 1924 MHz (5 samples)
[2026-01-13 23:45:25] 2026-01-14 04:45:04,442 | INFO     | ..............................
[2026-01-13 23:45:25] 2026-01-14 04:45:04,442 | INFO     | . Timing measurements:
[2026-01-13 23:45:25] 2026-01-14 04:45:04,442 | INFO     | . get job = 0 s
[2026-01-13 23:45:25] 2026-01-14 04:45:04,443 | INFO     | . initial setup = 2 s
[2026-01-13 23:45:25] 2026-01-14 04:45:04,443 | INFO     | . payload setup = 7 s
[2026-01-13 23:45:25] 2026-01-14 04:45:04,443 | INFO     | . stage-in = 0 s
[2026-01-13 23:45:25] 2026-01-14 04:45:04,443 | INFO     | . payload execution = 2833 s
[2026-01-13 23:45:25] 2026-01-14 04:45:04,443 | INFO     | . stage-out = 0 s
[2026-01-13 23:45:25] 2026-01-14 04:45:04,443 | INFO     | . log creation = 0 s
[2026-01-13 23:45:25] 2026-01-14 04:45:04,443 | INFO     | ..............................
[2026-01-13 23:45:25] 2026-01-14 04:45:04,755 | INFO     | time since job start (2868s) is within the limit (349056.0s)
[2026-01-13 23:45:25] 2026-01-14 04:45:04,782 | INFO     | 
[2026-01-13 23:45:25] 2026-01-14 04:45:04,782 | INFO     | job summary report
[2026-01-13 23:45:25] 2026-01-14 04:45:04,782 | INFO     | --------------------------------------------------
[2026-01-13 23:45:25] 2026-01-14 04:45:04,783 | INFO     | PanDA job id: 6969261473
[2026-01-13 23:45:25] 2026-01-14 04:45:04,783 | INFO     | task id: 48215263
[2026-01-13 23:45:25] 2026-01-14 04:45:04,783 | INFO     | errors: (none)
[2026-01-13 23:45:25] 2026-01-14 04:45:04,783 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 23:45:25] 2026-01-14 04:45:04,783 | INFO     | pilot state: finished 
[2026-01-13 23:45:25] 2026-01-14 04:45:04,783 | INFO     | transexitcode: 0
[2026-01-13 23:45:25] 2026-01-14 04:45:04,784 | INFO     | exeerrorcode: 0
[2026-01-13 23:45:25] 2026-01-14 04:45:04,784 | INFO     | exeerrordiag: 
[2026-01-13 23:45:25] 2026-01-14 04:45:04,784 | INFO     | exitcode: 0
[2026-01-13 23:45:25] 2026-01-14 04:45:04,784 | INFO     | exitmsg: OK
[2026-01-13 23:45:25] 2026-01-14 04:45:04,784 | INFO     | cpuconsumptiontime: 30210 s
[2026-01-13 23:45:25] 2026-01-14 04:45:04,784 | INFO     | nevents: 400
[2026-01-13 23:45:25] 2026-01-14 04:45:04,784 | INFO     | neventsw: 0
[2026-01-13 23:45:25] 2026-01-14 04:45:04,785 | INFO     | pid: 8176
[2026-01-13 23:45:25] 2026-01-14 04:45:04,785 | INFO     | pgrp: 8176
[2026-01-13 23:45:25] 2026-01-14 04:45:04,785 | INFO     | corecount: 12
[2026-01-13 23:45:25] 2026-01-14 04:45:04,785 | INFO     | event service: False
[2026-01-13 23:45:25] 2026-01-14 04:45:04,785 | INFO     | sizes: {0: 2283945, 5: 2284207, 11: 2284263, 2844: 2309529, 2845: 2318583, 2852: 2318753}
[2026-01-13 23:45:25] 2026-01-14 04:45:04,785 | INFO     | --------------------------------------------------
[2026-01-13 23:45:25] 2026-01-14 04:45:04,786 | INFO     | 
[2026-01-13 23:45:25] 2026-01-14 04:45:04,786 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-13 23:45:25] 2026-01-14 04:45:04,811 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 23:45:25] 2026-01-14 04:45:04,812 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 23:45:25] 2026-01-14 04:45:04,812 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 23:45:25] 2026-01-14 04:45:04,812 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 23:45:25] 2026-01-14 04:45:04,812 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 23:45:25] 2026-01-14 04:45:04,813 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 23:45:25] 2026-01-14 04:45:04,813 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 23:45:25] 2026-01-14 04:45:04,813 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 23:45:25] 2026-01-14 04:45:04,813 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 23:45:25] 2026-01-14 04:45:04,813 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 23:45:25] 2026-01-14 04:45:04,813 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 23:45:25] 2026-01-14 04:45:04,814 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 23:45:25] 2026-01-14 04:45:04,814 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 23:45:25] 2026-01-14 04:45:04,814 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 23:45:25] 2026-01-14 04:45:04,814 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 23:45:25] 2026-01-14 04:45:04,814 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 23:45:25] 2026-01-14 04:45:04,814 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 23:45:25] 2026-01-14 04:45:04,815 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 23:45:25] 2026-01-14 04:45:04,815 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 23:45:25] 2026-01-14 04:45:04,815 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 23:45:25] 2026-01-14 04:45:04,815 | INFO     | job 6969261473 has completed (purged errors)
[2026-01-13 23:45:25] 2026-01-14 04:45:04,815 | INFO     | overall cleanup function is called
[2026-01-13 23:45:25] 2026-01-14 04:45:05,823 | INFO     | --- collectZombieJob: --- 10, [8176]
[2026-01-13 23:45:25] 2026-01-14 04:45:05,824 | INFO     | zombie collector waiting for pid 8176
[2026-01-13 23:45:25] 2026-01-14 04:45:05,824 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 23:45:25] 2026-01-14 04:45:05,824 | INFO     | collected zombie processes
[2026-01-13 23:45:25] 2026-01-14 04:45:05,824 | INFO     | will attempt to kill all subprocesses of pid=8176
[2026-01-13 23:45:25] 2026-01-14 04:45:05,918 | INFO     | process IDs to be killed: [8176] (in reverse order)
[2026-01-13 23:45:25] 2026-01-14 04:45:05,969 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 23:45:25] 2026-01-14 04:45:05,969 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 23:45:25] 2026-01-14 04:45:05,973 | INFO     | did not find any defunct processes belonging to 8176
[2026-01-13 23:45:25] 2026-01-14 04:45:05,977 | INFO     | did not find any defunct processes belonging to 8176
[2026-01-13 23:45:25] 2026-01-14 04:45:05,977 | INFO     | ready for new job
[2026-01-13 23:45:25] 2026-01-14 04:45:05,977 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 23:45:25] 2026-01-14 04:45:05,978 | INFO     | ***************************************
[2026-01-13 23:45:25] 2026-01-14 04:45:05,978 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 23:45:25] 2026-01-14 04:45:05,978 | INFO     | ***************************************
[2026-01-13 23:45:25] 2026-01-14 04:45:05,978 | INFO     | 
[2026-01-13 23:45:25] 2026-01-14 04:45:05,979 | INFO     | architecture information:
[2026-01-13 23:45:25] 2026-01-14 04:45:05,979 | INFO     | executing command: cat /etc/os-release
[2026-01-13 23:45:25] 2026-01-14 04:45:05,994 | INFO     | cat /etc/os-release:
[2026-01-13 23:45:25] NAME="CentOS Linux"
[2026-01-13 23:45:25] VERSION="7 (Core)"
[2026-01-13 23:45:25] ID="centos"
[2026-01-13 23:45:25] ID_LIKE="rhel fedora"
[2026-01-13 23:45:25] VERSION_ID="7"
[2026-01-13 23:45:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 23:45:25] ANSI_COLOR="0;31"
[2026-01-13 23:45:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 23:45:25] HOME_URL="https://www.centos.org/"
[2026-01-13 23:45:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 23:45:25] 
[2026-01-13 23:45:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 23:45:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 23:45:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 23:45:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 23:45:25] 
[2026-01-13 23:45:25] 2026-01-14 04:45:05,994 | INFO     | ***************************************
[2026-01-13 23:45:25] 2026-01-14 04:45:06,497 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-13 23:45:25] 2026-01-14 04:45:06,514 | INFO     | sufficient remaining disk space (28618784768 B)
[2026-01-13 23:45:25] 2026-01-14 04:45:06,514 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 23:45:25] 2026-01-14 04:45:06,515 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 23:45:25] 2026-01-14 04:45:06,515 | INFO     | update_server=False
[2026-01-13 23:45:25] 2026-01-14 04:45:06,515 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 23:45:25] 2026-01-14 04:45:06,515 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 23:45:25] 2026-01-14 04:45:06,516 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 23:45:25] 2026-01-14 04:45:06,516 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-13 23:45:25] 2026-01-14 04:45:06,516 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 23:45:25] 2026-01-14 04:45:06,517 | INFO     | aborting loop
[2026-01-13 23:45:25] 2026-01-14 04:45:06,517 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 23:45:25] 2026-01-14 04:45:06,518 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 23:45:25] 2026-01-14 04:45:06,518 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 23:45:25] 2026-01-14 04:45:06,739 | INFO     | all data control threads have been joined
[2026-01-13 23:45:25] 2026-01-14 04:45:07,491 | INFO     | all job control threads have been joined
[2026-01-13 23:45:25] 2026-01-14 04:45:07,520 | INFO     | [job] retrieve thread has finished
[2026-01-13 23:45:25] 2026-01-14 04:45:07,521 | INFO     | [job] job monitor thread has finished
[2026-01-13 23:45:25] 2026-01-14 04:45:07,522 | INFO     | [job] queue monitor thread has finished
[2026-01-13 23:45:25] 2026-01-14 04:45:07,549 | INFO     | [job] validate thread has finished
[2026-01-13 23:45:25] 2026-01-14 04:45:07,708 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 23:45:25] 2026-01-14 04:45:07,732 | INFO     | all payload control threads have been joined
[2026-01-13 23:45:25] 2026-01-14 04:45:07,734 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 23:45:25] 2026-01-14 04:45:07,744 | INFO     | [payload] validate_post thread has finished
[2026-01-13 23:45:25] 2026-01-14 04:45:07,744 | INFO     | [data] control thread has finished
[2026-01-13 23:45:25] 2026-01-14 04:45:08,094 | INFO     | [payload] failed_post thread has finished
[2026-01-13 23:45:25] 2026-01-14 04:45:08,139 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 23:45:25] 2026-01-14 04:45:08,497 | INFO     | [job] control thread has finished
[2026-01-13 23:45:25] 2026-01-14 04:45:08,502 | INFO     | [data] copytool_in thread has finished
[2026-01-13 23:45:25] 2026-01-14 04:45:08,523 | INFO     | [data] copytool_out thread has finished
[2026-01-13 23:45:25] 2026-01-14 04:45:08,563 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 23:45:25] 2026-01-14 04:45:08,692 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 23:45:25] 2026-01-14 04:45:08,737 | INFO     | [payload] control thread has finished
[2026-01-13 23:45:25] 2026-01-14 04:45:12,698 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 23:45:25] 2026-01-14 04:45:20,183 | INFO     | [monitor] cgroup control has ended
[2026-01-13 23:45:25] 2026-01-14 04:45:20,618 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140463107598144)>', '<ExcThread(monitor, started 140461855463168)>']
[2026-01-13 23:45:25] 2026-01-14 04:45:21,594 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 23:45:25] 2026-01-14 04:45:21,595 | INFO     | [monitor] control thread has ended
[2026-01-13 23:45:25] 2026-01-14 04:45:25,640 | INFO     | all workflow threads have been joined
[2026-01-13 23:45:25] 2026-01-14 04:45:25,640 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 23:45:25] 2026-01-14 04:45:25,640 | INFO     | traces error code: 0
[2026-01-13 23:45:25] 2026-01-14 04:45:25,640 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 23:45:25] 2026-01-14 04:45:25,731 [wrapper] ==== pilot stdout END ====
[2026-01-13 23:45:25] 2026-01-14 04:45:25,734 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 23:45:25] 2026-01-14 04:45:25,738 [wrapper] pilotpid: 1695
[2026-01-13 23:45:25] 2026-01-14 04:45:25,742 [wrapper] Pilot exit status: 0
[2026-01-13 23:45:25] 2026-01-14 04:45:25,757 [wrapper] pandaids: 6969261473
[2026-01-13 23:45:25] 2026-01-14 04:45:25,797 [wrapper] cleanup supervisor_pilot 29785 1696
[2026-01-13 23:45:25] 2026-01-14 04:45:25,801 [wrapper] Test setup, not cleaning
[2026-01-13 23:45:25] 2026-01-14 04:45:25,805 [wrapper] apfmon messages muted
[2026-01-13 23:45:25] 2026-01-14 04:45:25,809 [wrapper] ==== wrapper stdout END ====
[2026-01-13 23:45:25] 2026-01-14 04:45:25,813 [wrapper] ==== wrapper stderr END ====
[2026-01-13 23:45:25]  *** Error codes and diagnostics ***
[2026-01-13 23:45:25]     "exeErrorCode": 0,
[2026-01-13 23:45:25]     "exeErrorDiag": "",
[2026-01-13 23:45:25]     "pilotErrorCode": 0,
[2026-01-13 23:45:25]     "pilotErrorDiag": "",
[2026-01-13 23:45:25]  *** Listing of results directory ***
[2026-01-13 23:45:25] total 743472
[2026-01-13 23:45:25] -rwx------ 1 boincer umatlas     36322 Jan 13 16:58 runpilot2-wrapper.sh
[2026-01-13 23:45:25] -rw-r--r-- 1 boincer umatlas    579449 Jan 13 17:05 pilot3.tar.gz
[2026-01-13 23:45:25] -rw-r--r-- 1 boincer umatlas      5112 Jan 13 17:12 queuedata.json
[2026-01-13 23:45:25] -rw-r--r-- 1 boincer umatlas       100 Jan 13 22:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 23:45:25] -rwxr-xr-x 1 boincer umatlas      7986 Jan 13 22:56 run_atlas
[2026-01-13 23:45:25] -rw-r--r-- 1 boincer umatlas       105 Jan 13 22:56 job.xml
[2026-01-13 23:45:25] -rw-r--r-- 2 boincer umatlas 602336961 Jan 13 22:56 EVNT.32794306._000110.pool.root.1
[2026-01-13 23:45:25] -rw-r--r-- 2 boincer umatlas     15847 Jan 13 22:56 start_atlas.sh
[2026-01-13 23:45:25] drwxrwx--x 2 boincer umatlas      4096 Jan 13 22:56 shared
[2026-01-13 23:45:25] -rw-r--r-- 2 boincer umatlas    592389 Jan 13 22:56 input.tar.gz
[2026-01-13 23:45:25] -rw-r--r-- 1 boincer umatlas         0 Jan 13 22:56 boinc_lockfile
[2026-01-13 23:45:25] -rw-r--r-- 1 boincer umatlas      2505 Jan 13 22:57 pandaJob.out
[2026-01-13 23:45:25] -rw------- 1 boincer umatlas        57 Jan 13 22:57 setup.sh.local
[2026-01-13 23:45:25] -rw------- 1 boincer umatlas    997226 Jan 13 22:57 agis_schedconf.cvmfs.json
[2026-01-13 23:45:25] -rw------- 1 boincer umatlas   1516246 Jan 13 22:57 agis_ddmendpoints.agis.ALL.json
[2026-01-13 23:45:25] drwx------ 5 boincer umatlas      4096 Jan 13 22:57 pilot3
[2026-01-13 23:45:25] -rw-r--r-- 1 boincer umatlas      5953 Jan 13 23:37 init_data.xml
[2026-01-13 23:45:25] -rw------- 1 boincer umatlas 153451954 Jan 13 23:44 HITS.48215263._002742.pool.root.1
[2026-01-13 23:45:25] -rw-r--r-- 1 boincer umatlas       530 Jan 13 23:44 boinc_task_state.xml
[2026-01-13 23:45:25] -rw------- 1 boincer umatlas        95 Jan 13 23:44 pilot_heartbeat.json
[2026-01-13 23:45:25] -rw------- 1 boincer umatlas      1045 Jan 13 23:44 memory_monitor_summary.json
[2026-01-13 23:45:25] -rw------- 1 boincer umatlas    366908 Jan 13 23:44 log.48215263._002742.job.log.tgz.1
[2026-01-13 23:45:25] -rw------- 1 boincer umatlas      7845 Jan 13 23:45 heartbeat.json
[2026-01-13 23:45:25] -rw-r--r-- 1 boincer umatlas        27 Jan 13 23:45 wrapper_checkpoint.txt
[2026-01-13 23:45:25] -rw-r--r-- 1 boincer umatlas      8192 Jan 13 23:45 boinc_mmap_file
[2026-01-13 23:45:25] -rw------- 1 boincer umatlas      4552 Jan 13 23:45 pilotlog.txt
[2026-01-13 23:45:25] -rw------- 1 boincer umatlas    435482 Jan 13 23:45 log.48215263._002742.job.log.1
[2026-01-13 23:45:25] -rw------- 1 boincer umatlas       357 Jan 13 23:45 output.list
[2026-01-13 23:45:25] -rw-r--r-- 1 boincer umatlas       620 Jan 13 23:45 runtime_log
[2026-01-13 23:45:25] -rw------- 1 boincer umatlas    819200 Jan 13 23:45 result.tar.gz
[2026-01-13 23:45:25] -rw------- 1 boincer umatlas       659 Jan 13 23:45 XhQLDmea1z8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLqoKDmrv0XSn.diag
[2026-01-13 23:45:25] -rw-r--r-- 1 boincer umatlas      9344 Jan 13 23:45 runtime_log.err
[2026-01-13 23:45:25] -rw-r--r-- 1 boincer umatlas     21575 Jan 13 23:45 stderr.txt
[2026-01-13 23:45:25] HITS file was successfully produced:
[2026-01-13 23:45:25] -rw------- 1 boincer umatlas 153451954 Jan 13 23:44 shared/HITS.pool.root.1
[2026-01-13 23:45:25]  *** Contents of shared directory: ***
[2026-01-13 23:45:25] total 739480
[2026-01-13 23:45:25] -rw-r--r-- 2 boincer umatlas 602336961 Jan 13 22:56 ATLAS.root_0
[2026-01-13 23:45:25] -rw-r--r-- 2 boincer umatlas     15847 Jan 13 22:56 start_atlas.sh
[2026-01-13 23:45:25] -rw-r--r-- 2 boincer umatlas    592389 Jan 13 22:56 input.tar.gz
[2026-01-13 23:45:25] -rw------- 1 boincer umatlas 153451954 Jan 13 23:44 HITS.pool.root.1
[2026-01-13 23:45:25] -rw------- 1 boincer umatlas    819200 Jan 13 23:45 result.tar.gz
23:45:27 (30364): run_atlas exited; CPU time 30155.122441
23:45:27 (30364): called boinc_finish(0)

</stderr_txt>
]]>

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