Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:54:49 (31247): wrapper (7.7.26015): starting
07:54:49 (31247): wrapper: running run_atlas (--nthreads 8)
[2026-01-14 07:54:49] Arguments: --nthreads 8
[2026-01-14 07:54:49] Threads: 8
[2026-01-14 07:54:49] Checking for CVMFS
[2026-01-14 07:54:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 07:54:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 07:54:52] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 07:54:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 07:54:53] 2.11.2.0 2467 42281 127680 155121 3 61 24130445 25165824 96 130560 0 19090787 99.812 12179491 2934 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-14 07:54:53] CVMFS is ok
[2026-01-14 07:54:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 07:54:53] Checking for apptainer binary...
[2026-01-14 07:54:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 07:54:53] Running /usr/bin/apptainer --version
[2026-01-14 07:54:53] apptainer version 1.3.2-1.el7
[2026-01-14 07:54:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 07:55:03] cg-vwn487.simple-grid.lan
[2026-01-14 07:55:03] apptainer works
[2026-01-14 07:55:03] Set ATHENA_PROC_NUMBER=8
[2026-01-14 07:55:03] Set ATHENA_CORE_NUMBER=8
[2026-01-14 07:55:03] Starting ATLAS job with PandaID=6969266346
[2026-01-14 07:55:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 10:39:28]  *** The last 200 lines of the pilot log: ***
[2026-01-14 10:39:28] 2026-01-14 09:38:28,755 | INFO     | sum of square deviations: 964976232.5
[2026-01-14 10:39:28] 2026-01-14 09:38:28,756 | INFO     | sum of deviations: 64853537902.50002
[2026-01-14 10:39:28] 2026-01-14 09:38:28,756 | INFO     | mean x: 1768378911.5
[2026-01-14 10:39:28] 2026-01-14 09:38:28,756 | INFO     | mean y: 2430200.5410958906
[2026-01-14 10:39:28] 2026-01-14 09:38:28,756 | INFO     | intersect: -118845708126.99744
[2026-01-14 10:39:28] 2026-01-14 09:38:28,757 | INFO     | chi2: 9.206359416166359
[2026-01-14 10:39:28] 2026-01-14 09:38:28,757 | INFO     | sum of square deviations: 869188390.0
[2026-01-14 10:39:28] 2026-01-14 09:38:28,766 | INFO     | sum of deviations: 72758395929.00021
[2026-01-14 10:39:28] 2026-01-14 09:38:28,766 | INFO     | mean x: 1768378759.0
[2026-01-14 10:39:28] 2026-01-14 09:38:28,766 | INFO     | mean y: 2442351.0780141843
[2026-01-14 10:39:28] 2026-01-14 09:38:28,767 | INFO     | intersect: -148025768080.67438
[2026-01-14 10:39:28] 2026-01-14 09:38:28,767 | INFO     | chi2: 8.536642224035877
[2026-01-14 10:39:28] 2026-01-14 09:38:28,767 | INFO     | current chi2=8.536642224035877 (change=7.274506260905475 %)
[2026-01-14 10:39:28] 2026-01-14 09:38:28,767 | INFO     | right removable region: 140
[2026-01-14 10:39:28] 2026-01-14 09:38:28,767 | INFO     | sum of square deviations: 869188390.0
[2026-01-14 10:39:28] 2026-01-14 09:38:28,768 | INFO     | sum of deviations: 14094791211.000006
[2026-01-14 10:39:28] 2026-01-14 09:38:28,768 | INFO     | mean x: 1768379064.0
[2026-01-14 10:39:28] 2026-01-14 09:38:28,769 | INFO     | mean y: 2510938.9007092197
[2026-01-14 10:39:28] 2026-01-14 09:38:28,769 | INFO     | intersect: -28673589634.628136
[2026-01-14 10:39:28] 2026-01-14 09:38:28,769 | INFO     | chi2: 3.7679918619621082
[2026-01-14 10:39:28] 2026-01-14 09:38:28,769 | INFO     | current chi2=3.7679918619621082 (change=59.07185792306221 %)
[2026-01-14 10:39:28] 2026-01-14 09:38:28,769 | INFO     | sum of square deviations: 779958810.0
[2026-01-14 10:39:28] 2026-01-14 09:38:28,770 | INFO     | sum of deviations: -23679914001.5
[2026-01-14 10:39:28] 2026-01-14 09:38:28,770 | INFO     | mean x: 1768379216.5
[2026-01-14 10:39:28] 2026-01-14 09:38:28,771 | INFO     | mean y: 2575353.330882353
[2026-01-14 10:39:28] 2026-01-14 09:38:28,771 | INFO     | intersect: 53691394854.9145
[2026-01-14 10:39:28] 2026-01-14 09:38:28,771 | INFO     | chi2: 1.0250397294187608
[2026-01-14 10:39:28] 2026-01-14 09:38:28,771 | INFO     | current chi2=1.0250397294187608 (change=72.79612677069342 %)
[2026-01-14 10:39:28] 2026-01-14 09:38:28,771 | INFO     | sum of square deviations: 697054930.0
[2026-01-14 10:39:28] 2026-01-14 09:38:28,772 | INFO     | sum of deviations: -29564774840.0
[2026-01-14 10:39:28] 2026-01-14 09:38:28,772 | INFO     | mean x: 1768379369.0
[2026-01-14 10:39:28] 2026-01-14 09:38:28,772 | INFO     | mean y: 2585963.8320610686
[2026-01-14 10:39:28] 2026-01-14 09:38:28,773 | INFO     | intersect: 75006341946.42912
[2026-01-14 10:39:28] 2026-01-14 09:38:28,773 | INFO     | chi2: 0.8606409170562178
[2026-01-14 10:39:28] 2026-01-14 09:38:28,773 | INFO     | current chi2=0.8606409170562178 (change=16.038286872623345 %)
[2026-01-14 10:39:28] 2026-01-14 09:38:28,773 | INFO     | left removable region: 30
[2026-01-14 10:39:28] 2026-01-14 09:38:28,773 | INFO     | sum of square deviations: 412686807.5
[2026-01-14 10:39:28] 2026-01-14 09:38:28,774 | INFO     | sum of deviations: -14610268264.500002
[2026-01-14 10:39:28] 2026-01-14 09:38:28,774 | INFO     | mean x: 1768379643.5
[2026-01-14 10:39:28] 2026-01-14 09:38:28,774 | INFO     | mean y: 2595450.590909091
[2026-01-14 10:39:28] 2026-01-14 09:38:28,774 | INFO     | intersect: 62608185247.68148
[2026-01-14 10:39:28] 2026-01-14 09:38:28,775 | INFO     | chi2: 0.0471319453617301
[2026-01-14 10:39:28] 2026-01-14 09:38:28,775 | INFO     | current memory leak: -35.40 B/s (using 110 data points, chi2=0.05)
[2026-01-14 10:39:28] 2026-01-14 09:38:28,775 | INFO     | could have reported an average CPU frequency of 2249 MHz (8 samples)
[2026-01-14 10:39:28] 2026-01-14 09:38:28,776 | INFO     | ..............................
[2026-01-14 10:39:28] 2026-01-14 09:38:28,776 | INFO     | . Timing measurements:
[2026-01-14 10:39:28] 2026-01-14 09:38:28,776 | INFO     | . get job = 0 s
[2026-01-14 10:39:28] 2026-01-14 09:38:28,776 | INFO     | . initial setup = 9 s
[2026-01-14 10:39:28] 2026-01-14 09:38:28,776 | INFO     | . payload setup = 152 s
[2026-01-14 10:39:28] 2026-01-14 09:38:28,776 | INFO     | . stage-in = 0 s
[2026-01-14 10:39:28] 2026-01-14 09:38:28,776 | INFO     | . payload execution = 9080 s
[2026-01-14 10:39:28] 2026-01-14 09:38:28,776 | INFO     | . stage-out = 3 s
[2026-01-14 10:39:28] 2026-01-14 09:38:28,776 | INFO     | . log creation = 1 s
[2026-01-14 10:39:28] 2026-01-14 09:38:28,777 | INFO     | ..............................
[2026-01-14 10:39:28] 2026-01-14 09:38:28,958 | INFO     | 
[2026-01-14 10:39:28] 2026-01-14 09:38:28,959 | INFO     | job summary report
[2026-01-14 10:39:28] 2026-01-14 09:38:28,959 | INFO     | --------------------------------------------------
[2026-01-14 10:39:28] 2026-01-14 09:38:28,959 | INFO     | PanDA job id: 6969266346
[2026-01-14 10:39:28] 2026-01-14 09:38:28,959 | INFO     | task id: 48215263
[2026-01-14 10:39:28] 2026-01-14 09:38:28,959 | INFO     | errors: (none)
[2026-01-14 10:39:28] 2026-01-14 09:38:28,959 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 10:39:28] 2026-01-14 09:38:28,960 | INFO     | pilot state: finished 
[2026-01-14 10:39:28] 2026-01-14 09:38:28,960 | INFO     | transexitcode: 0
[2026-01-14 10:39:28] 2026-01-14 09:38:28,960 | INFO     | exeerrorcode: 0
[2026-01-14 10:39:28] 2026-01-14 09:38:28,960 | INFO     | exeerrordiag: 
[2026-01-14 10:39:28] 2026-01-14 09:38:28,960 | INFO     | exitcode: 0
[2026-01-14 10:39:28] 2026-01-14 09:38:28,960 | INFO     | exitmsg: OK
[2026-01-14 10:39:28] 2026-01-14 09:38:28,960 | INFO     | cpuconsumptiontime: 32030 s
[2026-01-14 10:39:28] 2026-01-14 09:38:28,960 | INFO     | nevents: 400
[2026-01-14 10:39:28] 2026-01-14 09:38:28,960 | INFO     | neventsw: 0
[2026-01-14 10:39:28] 2026-01-14 09:38:28,960 | INFO     | pid: 9160
[2026-01-14 10:39:28] 2026-01-14 09:38:28,961 | INFO     | pgrp: 9160
[2026-01-14 10:39:28] 2026-01-14 09:38:28,961 | INFO     | corecount: 8
[2026-01-14 10:39:28] 2026-01-14 09:38:28,961 | INFO     | event service: False
[2026-01-14 10:39:28] 2026-01-14 09:38:28,961 | INFO     | sizes: {0: 2283772, 1: 2283971, 12: 2283971, 23: 2283999, 33: 2284027, 44: 2284083, 55: 2284239, 66: 2284267, 76: 2284295, 87: 2284351, 98: 2284379, 107: 2284949, 
[2026-01-14 10:39:28] 2026-01-14 09:38:28,961 | INFO     | --------------------------------------------------
[2026-01-14 10:39:28] 2026-01-14 09:38:28,961 | INFO     | 
[2026-01-14 10:39:28] 2026-01-14 09:38:28,961 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-01-14 10:39:28] 2026-01-14 09:38:29,082 | INFO     | sufficient remaining disk space (494330183680 B)
[2026-01-14 10:39:28] 2026-01-14 09:38:29,082 | INFO     | work directory size check will use 4404019200 B as a max limit (20% grace limit added, divider=1)
[2026-01-14 10:39:28] 2026-01-14 09:38:29,083 | INFO     | size of work directory /var/lib/boinc/slots/4/PanDA_Pilot-6969266346: 3178694 B (within 4404019200 B limit)
[2026-01-14 10:39:28] 2026-01-14 09:38:29,084 | INFO     | pfn file=/var/lib/boinc/slots/4/PanDA_Pilot-6969266346/HITS.48215263._005052.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-14 10:39:28] 2026-01-14 09:38:29,084 | INFO     | total size of present files: 0 B (workdir size: 3178694 B)
[2026-01-14 10:39:28] 2026-01-14 09:38:29,084 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/4/PanDA_Pilot-6969266346/HITS.48215263._005052.pool.root.1 since it does not exist
[2026-01-14 10:39:28] 2026-01-14 09:38:29,206 | INFO     | number of running child processes to parent process 9160: 1
[2026-01-14 10:39:28] 2026-01-14 09:38:29,207 | INFO     | maximum number of monitored processes: 8
[2026-01-14 10:39:28] 2026-01-14 09:38:29,207 | INFO     | aborting job monitoring since job object (job id=6969266346) has expired
[2026-01-14 10:39:28] 2026-01-14 09:38:29,547 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 10:39:28] 2026-01-14 09:38:29,547 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 10:39:28] 2026-01-14 09:38:29,547 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 10:39:28] 2026-01-14 09:38:29,547 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 10:39:28] 2026-01-14 09:38:29,548 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 10:39:28] 2026-01-14 09:38:29,548 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 10:39:28] 2026-01-14 09:38:29,548 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 10:39:28] 2026-01-14 09:38:29,548 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 10:39:28] 2026-01-14 09:38:29,548 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 10:39:28] 2026-01-14 09:38:29,548 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 10:39:28] 2026-01-14 09:38:29,548 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 10:39:28] 2026-01-14 09:38:29,548 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 10:39:28] 2026-01-14 09:38:29,549 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 10:39:28] 2026-01-14 09:38:29,549 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 10:39:28] 2026-01-14 09:38:29,549 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 10:39:28] 2026-01-14 09:38:29,549 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 10:39:28] 2026-01-14 09:38:29,549 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 10:39:28] 2026-01-14 09:38:29,549 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 10:39:28] 2026-01-14 09:38:29,549 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 10:39:28] 2026-01-14 09:38:29,549 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 10:39:28] 2026-01-14 09:38:29,549 | INFO     | job 6969266346 has completed (purged errors)
[2026-01-14 10:39:28] 2026-01-14 09:38:29,550 | INFO     | overall cleanup function is called
[2026-01-14 10:39:28] 2026-01-14 09:38:30,557 | INFO     | --- collectZombieJob: --- 10, [9160]
[2026-01-14 10:39:28] 2026-01-14 09:38:30,558 | INFO     | zombie collector waiting for pid 9160
[2026-01-14 10:39:28] 2026-01-14 09:38:30,558 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 10:39:28] 2026-01-14 09:38:30,558 | INFO     | collected zombie processes
[2026-01-14 10:39:28] 2026-01-14 09:38:30,558 | INFO     | will attempt to kill all subprocesses of pid=9160
[2026-01-14 10:39:28] 2026-01-14 09:38:30,639 | INFO     | process IDs to be killed: [9160] (in reverse order)
[2026-01-14 10:39:28] 2026-01-14 09:38:31,612 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 10:39:28] 2026-01-14 09:38:31,612 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 10:39:28] 2026-01-14 09:38:31,614 | INFO     | did not find any defunct processes belonging to 9160
[2026-01-14 10:39:28] 2026-01-14 09:38:31,616 | INFO     | did not find any defunct processes belonging to 9160
[2026-01-14 10:39:28] 2026-01-14 09:38:31,616 | INFO     | ready for new job
[2026-01-14 10:39:28] 2026-01-14 09:38:31,616 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 10:39:28] 2026-01-14 09:38:31,618 | INFO     | ***************************************
[2026-01-14 10:39:28] 2026-01-14 09:38:31,618 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 10:39:28] 2026-01-14 09:38:31,618 | INFO     | ***************************************
[2026-01-14 10:39:28] 2026-01-14 09:38:31,618 | INFO     | 
[2026-01-14 10:39:28] 2026-01-14 09:38:31,619 | INFO     | pilot is running in a VM
[2026-01-14 10:39:28] 2026-01-14 09:38:31,619 | INFO     | architecture information:
[2026-01-14 10:39:28] 2026-01-14 09:38:31,632 | INFO     | executing command: cat /etc/os-release
[2026-01-14 10:39:28] 2026-01-14 09:38:31,949 | INFO     | cat /etc/os-release:
[2026-01-14 10:39:28] NAME="CentOS Linux"
[2026-01-14 10:39:28] VERSION="7 (Core)"
[2026-01-14 10:39:28] ID="centos"
[2026-01-14 10:39:28] ID_LIKE="rhel fedora"
[2026-01-14 10:39:28] VERSION_ID="7"
[2026-01-14 10:39:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 10:39:28] ANSI_COLOR="0;31"
[2026-01-14 10:39:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 10:39:28] HOME_URL="https://www.centos.org/"
[2026-01-14 10:39:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 10:39:28] 
[2026-01-14 10:39:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 10:39:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 10:39:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 10:39:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 10:39:28] 
[2026-01-14 10:39:28] 2026-01-14 09:38:31,949 | INFO     | ***************************************
[2026-01-14 10:39:28] 2026-01-14 09:38:32,453 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-01-14 10:39:28] 2026-01-14 09:38:32,700 | INFO     | sufficient remaining disk space (494336475136 B)
[2026-01-14 10:39:28] 2026-01-14 09:38:32,700 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 10:39:28] 2026-01-14 09:38:32,701 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 10:39:28] 2026-01-14 09:38:32,701 | INFO     | update_server=False
[2026-01-14 10:39:28] 2026-01-14 09:38:32,701 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 10:39:28] 2026-01-14 09:38:32,701 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 10:39:28] 2026-01-14 09:38:32,722 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 10:39:28] 2026-01-14 09:38:32,723 | INFO     | aborting loop
[2026-01-14 10:39:28] 2026-01-14 09:38:33,457 | INFO     | all data control threads have been joined
[2026-01-14 10:39:28] 2026-01-14 09:38:33,637 | INFO     | all job control threads have been joined
[2026-01-14 10:39:28] 2026-01-14 09:38:33,707 | INFO     | [job] retrieve thread has finished
[2026-01-14 10:39:28] 2026-01-14 09:38:33,729 | INFO     | [job] job monitor thread has finished
[2026-01-14 10:39:28] 2026-01-14 09:38:33,970 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 10:39:28] 2026-01-14 09:38:33,974 | INFO     | all payload control threads have been joined
[2026-01-14 10:39:28] 2026-01-14 09:38:34,085 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 10:39:28] 2026-01-14 09:38:34,134 | INFO     | [job] validate thread has finished
[2026-01-14 10:39:28] 2026-01-14 09:38:34,464 | INFO     | [data] control thread has finished
[2026-01-14 10:39:28] 2026-01-14 09:38:34,473 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 10:39:28] 2026-01-14 09:38:34,644 | INFO     | [job] control thread has finished
[2026-01-14 10:39:28] 2026-01-14 09:38:34,667 | INFO     | [payload] failed_post thread has finished
[2026-01-14 10:39:28] 2026-01-14 09:38:34,709 | INFO     | [data] copytool_out thread has finished
[2026-01-14 10:39:28] 2026-01-14 09:38:34,825 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 10:39:28] 2026-01-14 09:38:34,881 | INFO     | [data] copytool_in thread has finished
[2026-01-14 10:39:28] 2026-01-14 09:38:34,902 | INFO     | [payload] validate_post thread has finished
[2026-01-14 10:39:28] 2026-01-14 09:38:34,977 | INFO     | [job] queue monitor thread has finished
[2026-01-14 10:39:28] 2026-01-14 09:38:34,981 | INFO     | [payload] control thread has finished
[2026-01-14 10:39:28] 2026-01-14 09:38:35,159 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 10:39:28] 2026-01-14 09:38:38,835 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 10:39:28] 2026-01-14 09:38:43,418 | INFO     | job.realtimelogging is not enabled
[2026-01-14 10:39:28] 2026-01-14 09:38:44,424 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 10:39:28] 2026-01-14 09:39:01,372 | INFO     | PID=2640 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-14 10:39:28] 2026-01-14 09:39:01,372 | INFO     | .. there are 2 such processes running
[2026-01-14 10:39:28] 2026-01-14 09:39:01,373 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 10:39:28] 2026-01-14 09:39:01,374 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 10:39:28] 2026-01-14 09:39:01,374 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 10:39:28] 2026-01-14 09:39:16,834 | INFO     | [monitor] cgroup control has ended
[2026-01-14 10:39:28] 2026-01-14 09:39:18,204 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139642787264320)>', '<ExcThread(monitor, started 139642129082112)>']
[2026-01-14 10:39:28] 2026-01-14 09:39:18,475 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 10:39:28] 2026-01-14 09:39:18,476 | INFO     | [monitor] control thread has ended
[2026-01-14 10:39:28] 2026-01-14 09:39:23,229 | INFO     | all workflow threads have been joined
[2026-01-14 10:39:28] 2026-01-14 09:39:23,230 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 10:39:28] 2026-01-14 09:39:23,230 | INFO     | traces error code: 0
[2026-01-14 10:39:28] 2026-01-14 09:39:23,230 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 10:39:28] 2026-01-14 09:39:23,675 [wrapper] ==== pilot stdout END ====
[2026-01-14 10:39:28] 2026-01-14 09:39:23,757 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 10:39:28] 2026-01-14 09:39:23,893 [wrapper] pilotpid: 2640
[2026-01-14 10:39:28] 2026-01-14 09:39:24,013 [wrapper] Pilot exit status: 0
[2026-01-14 10:39:28] 2026-01-14 09:39:24,529 [wrapper] pandaids: 6969266346
[2026-01-14 10:39:28] 2026-01-14 09:39:25,608 [wrapper] cleanup supervisor_pilot 25580 2641
[2026-01-14 10:39:28] 2026-01-14 09:39:25,708 [wrapper] Test setup, not cleaning
[2026-01-14 10:39:28] 2026-01-14 09:39:25,815 [wrapper] apfmon messages muted
[2026-01-14 10:39:28] 2026-01-14 09:39:25,913 [wrapper] ==== wrapper stdout END ====
[2026-01-14 10:39:28] 2026-01-14 09:39:26,023 [wrapper] ==== wrapper stderr END ====
[2026-01-14 10:39:28]  *** Error codes and diagnostics ***
[2026-01-14 10:39:28]     "exeErrorCode": 0,
[2026-01-14 10:39:28]     "exeErrorDiag": "",
[2026-01-14 10:39:28]     "pilotErrorCode": 0,
[2026-01-14 10:39:28]     "pilotErrorDiag": "",
[2026-01-14 10:39:28]  *** Listing of results directory ***
[2026-01-14 10:39:28] total 737056
[2026-01-14 10:39:28] -rwx------. 1 boinc boinc     36322 Jan 13 22:58 runpilot2-wrapper.sh
[2026-01-14 10:39:28] -rw-r--r--. 1 boinc boinc    579449 Jan 13 23:05 pilot3.tar.gz
[2026-01-14 10:39:28] -rw-r--r--. 1 boinc boinc      5112 Jan 13 23:12 queuedata.json
[2026-01-14 10:39:28] -rw-r--r--. 1 boinc boinc       100 Jan 14 07:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 10:39:28] -rwxr-xr-x. 1 boinc boinc      7986 Jan 14 07:54 run_atlas
[2026-01-14 10:39:28] -rw-r--r--. 1 boinc boinc       105 Jan 14 07:54 job.xml
[2026-01-14 10:39:28] -rw-r--r--. 1 boinc boinc      6390 Jan 14 07:54 init_data.xml
[2026-01-14 10:39:28] -rw-r--r--. 2 boinc boinc 601508930 Jan 14 07:54 EVNT.32794306._000203.pool.root.1
[2026-01-14 10:39:28] -rw-r--r--. 2 boinc boinc     15847 Jan 14 07:54 start_atlas.sh
[2026-01-14 10:39:28] drwxrwx--x. 2 boinc boinc        68 Jan 14 07:54 shared
[2026-01-14 10:39:28] -rw-r--r--. 2 boinc boinc    592389 Jan 14 07:54 input.tar.gz
[2026-01-14 10:39:28] -rw-r--r--. 1 boinc boinc         0 Jan 14 07:54 boinc_lockfile
[2026-01-14 10:39:28] -rw-r--r--. 1 boinc boinc      2504 Jan 14 07:55 pandaJob.out
[2026-01-14 10:39:28] -rw-------. 1 boinc boinc    997218 Jan 14 07:58 agis_schedconf.cvmfs.json
[2026-01-14 10:39:28] -rw-------. 1 boinc boinc   1516246 Jan 14 07:58 agis_ddmendpoints.agis.ALL.json
[2026-01-14 10:39:28] drwx------. 5 boinc boinc      4096 Jan 14 07:59 pilot3
[2026-01-14 10:39:28] -rw-------. 1 boinc boinc 146024135 Jan 14 10:35 HITS.48215263._005052.pool.root.1
[2026-01-14 10:39:28] -rw-r--r--. 1 boinc boinc       531 Jan 14 10:35 boinc_task_state.xml
[2026-01-14 10:39:28] -rw-------. 1 boinc boinc      1014 Jan 14 10:36 memory_monitor_summary.json
[2026-01-14 10:39:28] -rw-------. 1 boinc boinc    373904 Jan 14 10:36 log.48215263._005052.job.log.tgz.1
[2026-01-14 10:39:28] -rw-------. 1 boinc boinc      7777 Jan 14 10:38 heartbeat.json
[2026-01-14 10:39:28] -rw-------. 1 boinc boinc        95 Jan 14 10:39 pilot_heartbeat.json
[2026-01-14 10:39:28] -rw-r--r--. 1 boinc boinc      8192 Jan 14 10:39 boinc_mmap_file
[2026-01-14 10:39:28] -rw-r--r--. 1 boinc boinc        27 Jan 14 10:39 wrapper_checkpoint.txt
[2026-01-14 10:39:28] -rw-------. 1 boinc boinc      4955 Jan 14 10:39 pilotlog.txt
[2026-01-14 10:39:28] -rw-------. 1 boinc boinc   1279671 Jan 14 10:39 log.48215263._005052.job.log.1
[2026-01-14 10:39:28] -rw-------. 1 boinc boinc       357 Jan 14 10:39 output.list
[2026-01-14 10:39:28] -rw-r--r--. 1 boinc boinc       620 Jan 14 10:39 runtime_log
[2026-01-14 10:39:28] -rw-------. 1 boinc boinc   1669120 Jan 14 10:39 result.tar.gz
[2026-01-14 10:39:28] -rw-------. 1 boinc boinc       653 Jan 14 10:39 ucbNDmaa1z8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmZpoKDm4gkmJo.diag
[2026-01-14 10:39:28] -rw-r--r--. 1 boinc boinc      8816 Jan 14 10:39 runtime_log.err
[2026-01-14 10:39:28] -rw-r--r--. 1 boinc boinc     21064 Jan 14 10:39 stderr.txt
[2026-01-14 10:39:28] HITS file was successfully produced:
[2026-01-14 10:39:28] -rw-------. 1 boinc boinc 146024135 Jan 14 10:35 shared/HITS.pool.root.1
[2026-01-14 10:39:28]  *** Contents of shared directory: ***
[2026-01-14 10:39:28] total 732244
[2026-01-14 10:39:28] -rw-r--r--. 2 boinc boinc 601508930 Jan 14 07:54 ATLAS.root_0
[2026-01-14 10:39:28] -rw-r--r--. 2 boinc boinc     15847 Jan 14 07:54 start_atlas.sh
[2026-01-14 10:39:28] -rw-r--r--. 2 boinc boinc    592389 Jan 14 07:54 input.tar.gz
[2026-01-14 10:39:28] -rw-------. 1 boinc boinc 146024135 Jan 14 10:35 HITS.pool.root.1
[2026-01-14 10:39:28] -rw-------. 1 boinc boinc   1669120 Jan 14 10:39 result.tar.gz
10:39:29 (31247): run_atlas exited; CPU time 32123.502422
10:39:29 (31247): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN