Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:10:38 (3184968): wrapper (7.7.26015): starting
23:10:38 (3184968): wrapper: running run_atlas (--nthreads 8)
[2026-01-13 23:10:38] Arguments: --nthreads 8
[2026-01-13 23:10:38] Threads: 8
[2026-01-13 23:10:38] Checking for CVMFS
[2026-01-13 23:10:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-13 23:10:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-13 23:10:39] Running cvmfs_config stat atlas.cern.ch
[2026-01-13 23:10:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-13 23:10:39] 2.13.3.0 9724 30244 257456 155116 2 537 32083904 40960000 13810 16776704 0 22869961 99.606 20323040 37074 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-13 23:10:39] CVMFS is ok
[2026-01-13 23:10:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 23:10:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 23:10:39] Further information can be found at the LHC@home message board.
[2026-01-13 23:10:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 23:10:39] Checking for apptainer binary...
[2026-01-13 23:10:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-13 23:10:39] Running /usr/bin/apptainer --version
[2026-01-13 23:10:39] apptainer version 1.4.5-2.el9
[2026-01-13 23:10:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 23:10:39] c-210-33-3.aglt2.org
[2026-01-13 23:10:39] apptainer works
[2026-01-13 23:10:39] Set ATHENA_PROC_NUMBER=8
[2026-01-13 23:10:39] Set ATHENA_CORE_NUMBER=8
[2026-01-13 23:10:39] Starting ATLAS job with PandaID=6969264119
[2026-01-13 23:10:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 01:18:28]  *** The last 200 lines of the pilot log: ***
[2026-01-14 01:18:28]  status_code=0
[2026-01-14 01:18:28]  storage_token=
[2026-01-14 01:18:28]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6969264119/log.48215263._004200.job.log.tgz.1
[2026-01-14 01:18:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/41/b8/log.48215263._004200.job.log.tgz.1
[2026-01-14 01:18:28]  workdir=None
[2026-01-14 01:18:28] ]
[2026-01-14 01:18:28] 2026-01-14 05:51:12,030 | INFO     | time since job start (6016s) is within the limit (349056.0s)
[2026-01-14 01:18:28] 2026-01-14 05:51:12,181 | INFO     | transferring file log.48215263._004200.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6969264119/log.48215263._004200.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-14 01:18:28] 2026-01-14 05:51:12,181 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6969264119/log.48215263._004200.job.log.tgz.1 /tmp/boinchome/slots/2/log.48215263._004200.job
[2026-01-14 01:18:28] 2026-01-14 05:51:12,203 | INFO     | adding to output.list: log.48215263._004200.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/41/b8/log.48215263._004200.job.log.tg
[2026-01-14 01:18:28] 2026-01-14 05:51:12,204 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-14 01:18:28] 2026-01-14 05:51:12,204 | INFO     | summary of transferred files:
[2026-01-14 01:18:28] 2026-01-14 05:51:12,204 | INFO     |  -- lfn=log.48215263._004200.job.log.tgz.1, status_code=0, status=transferred
[2026-01-14 01:18:28] 2026-01-14 05:51:12,205 | INFO     | stage-out finished correctly
[2026-01-14 01:18:28] 2026-01-14 05:51:12,535 | INFO     | monitor loop #393: job 0:6969264119 is in state 'finished'
[2026-01-14 01:18:28] 2026-01-14 05:51:12,535 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 01:18:28] 2026-01-14 05:51:14,037 | INFO     | time since job start (6018s) is within the limit (349056.0s)
[2026-01-14 01:18:28] 2026-01-14 05:51:14,537 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-14 01:18:28] 2026-01-14 05:51:14,707 | INFO     | job 6969264119 has state=finished
[2026-01-14 01:18:28] 2026-01-14 05:51:14,707 | INFO     | preparing for final server update for job 6969264119 in state='finished'
[2026-01-14 01:18:28] 2026-01-14 05:51:14,796 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-14 01:18:28] 2026-01-14 05:51:14,797 | INFO     | this job has now completed (state=finished)
[2026-01-14 01:18:28] 2026-01-14 05:51:14,797 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-14 01:18:28] 2026-01-14 05:51:14,797 | INFO     | log transfer has been attempted: DONE
[2026-01-14 01:18:28] 2026-01-14 05:51:14,797 | INFO     | job 6969264119 has finished - writing final server update
[2026-01-14 01:18:28] 2026-01-14 05:51:14,798 | INFO     | total number of processed events: 400 (read)
[2026-01-14 01:18:28] 2026-01-14 05:51:14,798 | INFO     | executing command: lscpu
[2026-01-14 01:18:28] 2026-01-14 05:51:14,884 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-14 01:18:28] 2026-01-14 05:51:15,140 | INFO     | monitor loop #394: job 0:6969264119 is in state 'finished'
[2026-01-14 01:18:28] 2026-01-14 05:51:15,140 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 01:18:28] 2026-01-14 05:51:16,098 | INFO     | time since job start (6020s) is within the limit (349056.0s)
[2026-01-14 01:18:28] 2026-01-14 05:51:17,646 | INFO     | monitor loop #395: job 0:6969264119 is in state 'finished'
[2026-01-14 01:18:28] 2026-01-14 05:51:17,646 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 01:18:28] 2026-01-14 05:51:18,139 | INFO     | time since job start (6022s) is within the limit (349056.0s)
[2026-01-14 01:18:28] 2026-01-14 05:51:20,146 | INFO     | time since job start (6024s) is within the limit (349056.0s)
[2026-01-14 01:18:28] 2026-01-14 05:51:20,152 | INFO     | monitor loop #396: job 0:6969264119 is in state 'finished'
[2026-01-14 01:18:28] 2026-01-14 05:51:20,152 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 01:18:28] 2026-01-14 05:51:20,782 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-14 01:18:28] 2026-01-14 05:51:20,795 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2986.8349821428565
[2026-01-14 01:18:28] 2026-01-14 05:51:20,805 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6969264119/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 01:18:28] 2026-01-14 05:51:20,806 | INFO     | extracted standard info from prmon json
[2026-01-14 01:18:28] 2026-01-14 05:51:20,806 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 01:18:28] 2026-01-14 05:51:20,806 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 01:18:28] 2026-01-14 05:51:20,806 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 01:18:28] 2026-01-14 05:51:20,806 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 01:18:28] 2026-01-14 05:51:20,809 | INFO     | fitting pss+swap vs Time
[2026-01-14 01:18:28] 2026-01-14 05:51:20,809 | INFO     | sum of square deviations: 233705960.5714288
[2026-01-14 01:18:28] 2026-01-14 05:51:20,809 | INFO     | sum of deviations: 2022981896.0
[2026-01-14 01:18:28] 2026-01-14 05:51:20,809 | INFO     | mean x: 1768366947.7142856
[2026-01-14 01:18:28] 2026-01-14 05:51:20,809 | INFO     | mean y: 2552939.3076923075
[2026-01-14 01:18:28] 2026-01-14 05:51:20,810 | INFO     | intersect: -15304606159.090256
[2026-01-14 01:18:28] 2026-01-14 05:51:20,810 | INFO     | chi2: 0.023257447175958654
[2026-01-14 01:18:28] 2026-01-14 05:51:20,810 | INFO     | current memory leak: 8.66 B/s (using 91 data points, chi2=0.02)
[2026-01-14 01:18:28] 2026-01-14 05:51:20,810 | INFO     | could have reported an average CPU frequency of 2991 MHz (7 samples)
[2026-01-14 01:18:28] 2026-01-14 05:51:20,810 | INFO     | ..............................
[2026-01-14 01:18:28] 2026-01-14 05:51:20,811 | INFO     | . Timing measurements:
[2026-01-14 01:18:28] 2026-01-14 05:51:20,811 | INFO     | . get job = 0 s
[2026-01-14 01:18:28] 2026-01-14 05:51:20,811 | INFO     | . initial setup = 3 s
[2026-01-14 01:18:28] 2026-01-14 05:51:20,811 | INFO     | . payload setup = 10 s
[2026-01-14 01:18:28] 2026-01-14 05:51:20,811 | INFO     | . stage-in = 0 s
[2026-01-14 01:18:28] 2026-01-14 05:51:20,811 | INFO     | . payload execution = 5973 s
[2026-01-14 01:18:28] 2026-01-14 05:51:20,811 | INFO     | . stage-out = 7 s
[2026-01-14 01:18:28] 2026-01-14 05:51:20,811 | INFO     | . log creation = 0 s
[2026-01-14 01:18:28] 2026-01-14 05:51:20,811 | INFO     | ..............................
[2026-01-14 01:18:28] 2026-01-14 05:51:21,056 | INFO     | 
[2026-01-14 01:18:28] 2026-01-14 05:51:21,056 | INFO     | job summary report
[2026-01-14 01:18:28] 2026-01-14 05:51:21,056 | INFO     | --------------------------------------------------
[2026-01-14 01:18:28] 2026-01-14 05:51:21,056 | INFO     | PanDA job id: 6969264119
[2026-01-14 01:18:28] 2026-01-14 05:51:21,056 | INFO     | task id: 48215263
[2026-01-14 01:18:28] 2026-01-14 05:51:21,056 | INFO     | errors: (none)
[2026-01-14 01:18:28] 2026-01-14 05:51:21,056 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 01:18:28] 2026-01-14 05:51:21,056 | INFO     | pilot state: finished 
[2026-01-14 01:18:28] 2026-01-14 05:51:21,056 | INFO     | transexitcode: 0
[2026-01-14 01:18:28] 2026-01-14 05:51:21,056 | INFO     | exeerrorcode: 0
[2026-01-14 01:18:28] 2026-01-14 05:51:21,056 | INFO     | exeerrordiag: 
[2026-01-14 01:18:28] 2026-01-14 05:51:21,056 | INFO     | exitcode: 0
[2026-01-14 01:18:28] 2026-01-14 05:51:21,056 | INFO     | exitmsg: OK
[2026-01-14 01:18:28] 2026-01-14 05:51:21,056 | INFO     | cpuconsumptiontime: 25181 s
[2026-01-14 01:18:28] 2026-01-14 05:51:21,057 | INFO     | nevents: 400
[2026-01-14 01:18:28] 2026-01-14 05:51:21,057 | INFO     | neventsw: 0
[2026-01-14 01:18:28] 2026-01-14 05:51:21,057 | INFO     | pid: 3195493
[2026-01-14 01:18:28] 2026-01-14 05:51:21,057 | INFO     | pgrp: 3195493
[2026-01-14 01:18:28] 2026-01-14 05:51:21,057 | INFO     | corecount: 8
[2026-01-14 01:18:28] 2026-01-14 05:51:21,057 | INFO     | event service: False
[2026-01-14 01:18:28] 2026-01-14 05:51:21,057 | INFO     | sizes: {0: 2283774, 1: 2283973, 10: 2284235, 11: 2284263, 5988: 2311013, 5996: 2320011, 5998: 2320195, 6004: 2320389}
[2026-01-14 01:18:28] 2026-01-14 05:51:21,057 | INFO     | --------------------------------------------------
[2026-01-14 01:18:28] 2026-01-14 05:51:21,057 | INFO     | 
[2026-01-14 01:18:28] 2026-01-14 05:51:21,057 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-14 01:18:28] 2026-01-14 05:51:21,154 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 01:18:28] 2026-01-14 05:51:21,155 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 01:18:28] 2026-01-14 05:51:21,155 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 01:18:28] 2026-01-14 05:51:21,155 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 01:18:28] 2026-01-14 05:51:21,155 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 01:18:28] 2026-01-14 05:51:21,155 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 01:18:28] 2026-01-14 05:51:21,155 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 01:18:28] 2026-01-14 05:51:21,155 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 01:18:28] 2026-01-14 05:51:21,155 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 01:18:28] 2026-01-14 05:51:21,155 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 01:18:28] 2026-01-14 05:51:21,155 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 01:18:28] 2026-01-14 05:51:21,155 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 01:18:28] 2026-01-14 05:51:21,155 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 01:18:28] 2026-01-14 05:51:21,155 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 01:18:28] 2026-01-14 05:51:21,155 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 01:18:28] 2026-01-14 05:51:21,156 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 01:18:28] 2026-01-14 05:51:21,156 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 01:18:28] 2026-01-14 05:51:21,156 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 01:18:28] 2026-01-14 05:51:21,156 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 01:18:28] 2026-01-14 05:51:21,156 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 01:18:28] 2026-01-14 05:51:21,156 | INFO     | job 6969264119 has completed (purged errors)
[2026-01-14 01:18:28] 2026-01-14 05:51:21,156 | INFO     | overall cleanup function is called
[2026-01-14 01:18:28] 2026-01-14 05:51:22,271 | INFO     | --- collectZombieJob: --- 10, [3195493]
[2026-01-14 01:18:28] 2026-01-14 05:51:22,271 | INFO     | zombie collector waiting for pid 3195493
[2026-01-14 01:18:28] 2026-01-14 05:51:22,271 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 01:18:28] 2026-01-14 05:51:22,271 | INFO     | collected zombie processes
[2026-01-14 01:18:28] 2026-01-14 05:51:22,271 | INFO     | will attempt to kill all subprocesses of pid=3195493
[2026-01-14 01:18:28] 2026-01-14 05:51:22,598 | INFO     | PID=3188963 has CPU usage=8.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-14 01:18:28] 2026-01-14 05:51:22,599 | INFO     | .. there are 11 such processes running
[2026-01-14 01:18:28] 2026-01-14 05:51:22,671 | INFO     | process IDs to be killed: [3195493] (in reverse order)
[2026-01-14 01:18:28] 2026-01-14 05:51:22,756 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 01:18:28] 2026-01-14 05:51:22,756 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 01:18:28] 2026-01-14 05:51:22,765 | INFO     | did not find any defunct processes belonging to 3195493
[2026-01-14 01:18:28] 2026-01-14 05:51:22,785 | INFO     | did not find any defunct processes belonging to 3195493
[2026-01-14 01:18:28] 2026-01-14 05:51:22,785 | INFO     | ready for new job
[2026-01-14 01:18:28] 2026-01-14 05:51:22,785 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 01:18:28] 2026-01-14 05:51:22,819 | INFO     | ***************************************
[2026-01-14 01:18:28] 2026-01-14 05:51:22,819 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 01:18:28] 2026-01-14 05:51:22,819 | INFO     | ***************************************
[2026-01-14 01:18:28] 2026-01-14 05:51:22,819 | INFO     | 
[2026-01-14 01:18:28] 2026-01-14 05:51:22,822 | INFO     | architecture information:
[2026-01-14 01:18:28] 2026-01-14 05:51:22,830 | INFO     | executing command: cat /etc/os-release
[2026-01-14 01:18:28] 2026-01-14 05:51:22,847 | INFO     | cat /etc/os-release:
[2026-01-14 01:18:28] NAME="CentOS Linux"
[2026-01-14 01:18:28] VERSION="7 (Core)"
[2026-01-14 01:18:28] ID="centos"
[2026-01-14 01:18:28] ID_LIKE="rhel fedora"
[2026-01-14 01:18:28] VERSION_ID="7"
[2026-01-14 01:18:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 01:18:28] ANSI_COLOR="0;31"
[2026-01-14 01:18:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 01:18:28] HOME_URL="https://www.centos.org/"
[2026-01-14 01:18:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 01:18:28] 
[2026-01-14 01:18:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 01:18:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 01:18:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 01:18:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 01:18:28] 
[2026-01-14 01:18:28] 2026-01-14 05:51:22,848 | INFO     | ***************************************
[2026-01-14 01:18:28] 2026-01-14 05:51:23,350 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-14 01:18:28] 2026-01-14 05:51:23,364 | INFO     | sufficient remaining disk space (70341623808 B)
[2026-01-14 01:18:28] 2026-01-14 05:51:23,365 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 01:18:28] 2026-01-14 05:51:23,365 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 01:18:28] 2026-01-14 05:51:23,365 | INFO     | update_server=False
[2026-01-14 01:18:28] 2026-01-14 05:51:23,365 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 01:18:28] 2026-01-14 05:51:23,365 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 01:18:28] 2026-01-14 05:51:23,365 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-14 01:18:28] 2026-01-14 05:51:23,366 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 01:18:28] 2026-01-14 05:51:23,366 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 01:18:28] 2026-01-14 05:51:23,366 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 01:18:28] 2026-01-14 05:51:23,794 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 01:18:28] 2026-01-14 05:51:23,794 | INFO     | aborting loop
[2026-01-14 01:18:28] 2026-01-14 05:51:24,373 | INFO     | [job] retrieve thread has finished
[2026-01-14 01:18:28] 2026-01-14 05:51:24,410 | INFO     | all payload control threads have been joined
[2026-01-14 01:18:28] 2026-01-14 05:51:24,428 | INFO     | [payload] validate_post thread has finished
[2026-01-14 01:18:28] 2026-01-14 05:51:24,428 | INFO     | [payload] failed_post thread has finished
[2026-01-14 01:18:28] 2026-01-14 05:51:24,471 | INFO     | all data control threads have been joined
[2026-01-14 01:18:28] 2026-01-14 05:51:24,714 | INFO     | all job control threads have been joined
[2026-01-14 01:18:28] 2026-01-14 05:51:24,778 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 01:18:28] 2026-01-14 05:51:24,800 | INFO     | [job] validate thread has finished
[2026-01-14 01:18:28] 2026-01-14 05:51:24,802 | INFO     | [data] copytool_in thread has finished
[2026-01-14 01:18:28] 2026-01-14 05:51:24,807 | INFO     | [job] job monitor thread has finished
[2026-01-14 01:18:28] 2026-01-14 05:51:25,119 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 01:18:28] 2026-01-14 05:51:25,123 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 01:18:28] 2026-01-14 05:51:25,124 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 01:18:28] 2026-01-14 05:51:25,219 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 01:18:28] 2026-01-14 05:51:25,375 | INFO     | [data] copytool_out thread has finished
[2026-01-14 01:18:28] 2026-01-14 05:51:25,416 | INFO     | [payload] control thread has finished
[2026-01-14 01:18:28] 2026-01-14 05:51:25,518 | INFO     | [data] control thread has finished
[2026-01-14 01:18:28] 2026-01-14 05:51:25,720 | INFO     | [job] control thread has finished
[2026-01-14 01:18:28] 2026-01-14 05:51:25,922 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 01:18:28] 2026-01-14 05:51:26,931 | INFO     | [job] queue monitor thread has finished
[2026-01-14 01:18:28] 2026-01-14 05:51:29,229 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 01:18:28] 2026-01-14 05:52:06,569 | INFO     | [monitor] cgroup control has ended
[2026-01-14 01:18:28] 2026-01-14 05:52:08,163 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139895286691648)>', '<ExcThread(monitor, started 139895014135552)>']
[2026-01-14 01:18:28] 2026-01-14 05:52:08,652 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 01:18:28] 2026-01-14 05:52:08,653 | INFO     | [monitor] control thread has ended
[2026-01-14 01:18:28] 2026-01-14 05:52:13,200 | INFO     | all workflow threads have been joined
[2026-01-14 01:18:28] 2026-01-14 05:52:13,201 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 01:18:28] 2026-01-14 05:52:13,244 | INFO     | traces error code: 0
[2026-01-14 01:18:28] 2026-01-14 05:52:13,244 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 01:18:28] 2026-01-14 05:52:13,485 [wrapper] ==== pilot stdout END ====
[2026-01-14 01:18:28] 2026-01-14 05:52:13,488 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 01:18:28] 2026-01-14 05:52:13,491 [wrapper] pilotpid: 3188963
[2026-01-14 01:18:28] 2026-01-14 05:52:13,493 [wrapper] Pilot exit status: 0
[2026-01-14 01:18:28] 2026-01-14 05:52:13,618 [wrapper] pandaids: 6969264119
[2026-01-14 01:18:28] 2026-01-14 05:52:13,743 [wrapper] cleanup supervisor_pilot 3426989 3188964
[2026-01-14 01:18:28] 2026-01-14 05:52:13,745 [wrapper] Test setup, not cleaning
[2026-01-14 01:18:28] 2026-01-14 05:52:13,748 [wrapper] apfmon messages muted
[2026-01-14 01:18:28] 2026-01-14 05:52:13,750 [wrapper] ==== wrapper stdout END ====
[2026-01-14 01:18:28] 2026-01-14 05:52:13,753 [wrapper] ==== wrapper stderr END ====
[2026-01-14 01:18:28]  *** Error codes and diagnostics ***
[2026-01-14 01:18:28]     "exeErrorCode": 0,
[2026-01-14 01:18:28]     "exeErrorDiag": "",
[2026-01-14 01:18:28]     "pilotErrorCode": 0,
[2026-01-14 01:18:28]     "pilotErrorDiag": "",
[2026-01-14 01:18:28]  *** Listing of results directory ***
[2026-01-14 01:18:28] total 741204
[2026-01-14 01:18:28] -rwx------. 1 boincer umatlas     36322 Jan 13 16:58 runpilot2-wrapper.sh
[2026-01-14 01:18:28] -rw-r--r--. 1 boincer umatlas    579449 Jan 13 17:05 pilot3.tar.gz
[2026-01-14 01:18:28] -rw-r--r--. 1 boincer umatlas      5112 Jan 13 17:07 queuedata.json
[2026-01-14 01:18:28] -rw-r--r--. 1 boincer umatlas       100 Jan 13 23:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 01:18:28] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 13 23:10 run_atlas
[2026-01-14 01:18:28] -rw-r--r--. 1 boincer umatlas       105 Jan 13 23:10 job.xml
[2026-01-14 01:18:28] -rw-r--r--. 2 boincer umatlas 599210248 Jan 13 23:10 EVNT.32794306._000168.pool.root.1
[2026-01-14 01:18:28] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 23:10 start_atlas.sh
[2026-01-14 01:18:28] drwxrwx--x. 2 boincer umatlas      4096 Jan 13 23:10 shared
[2026-01-14 01:18:28] -rw-r--r--. 2 boincer umatlas    592395 Jan 13 23:10 input.tar.gz
[2026-01-14 01:18:28] -rw-r--r--. 1 boincer umatlas         0 Jan 13 23:10 boinc_lockfile
[2026-01-14 01:18:28] -rw-r--r--. 1 boincer umatlas      2505 Jan 13 23:10 pandaJob.out
[2026-01-14 01:18:28] -rw-------. 1 boincer umatlas        57 Jan 13 23:10 setup.sh.local
[2026-01-14 01:18:28] -rw-------. 1 boincer umatlas    997226 Jan 13 23:10 agis_schedconf.cvmfs.json
[2026-01-14 01:18:28] -rw-------. 1 boincer umatlas   1516246 Jan 13 23:10 agis_ddmendpoints.agis.ALL.json
[2026-01-14 01:18:28] drwx------. 5 boincer umatlas      4096 Jan 13 23:10 pilot3
[2026-01-14 01:18:28] -rw-------. 1 boincer umatlas 153495530 Jan 14 00:50 HITS.48215263._004200.pool.root.1
[2026-01-14 01:18:28] -rw-r--r--. 1 boincer umatlas       530 Jan 14 00:50 boinc_task_state.xml
[2026-01-14 01:18:28] -rw-------. 1 boincer umatlas        95 Jan 14 00:50 pilot_heartbeat.json
[2026-01-14 01:18:28] -rw-------. 1 boincer umatlas      1041 Jan 14 00:51 memory_monitor_summary.json
[2026-01-14 01:18:28] -rw-------. 1 boincer umatlas    358769 Jan 14 00:51 log.48215263._004200.job.log.tgz.1
[2026-01-14 01:18:28] -rw-------. 1 boincer umatlas      7820 Jan 14 00:51 heartbeat.json
[2026-01-14 01:18:28] -rw-------. 1 boincer umatlas      4552 Jan 14 00:52 pilotlog.txt
[2026-01-14 01:18:28] -rw-------. 1 boincer umatlas    819518 Jan 14 00:52 log.48215263._004200.job.log.1
[2026-01-14 01:18:28] -rw-------. 1 boincer umatlas       357 Jan 14 00:52 output.list
[2026-01-14 01:18:28] -rw-r--r--. 1 boincer umatlas       620 Jan 14 00:52 runtime_log
[2026-01-14 01:18:28] -rw-------. 1 boincer umatlas   1198080 Jan 14 00:52 result.tar.gz
[2026-01-14 01:18:28] -rw-r--r--. 1 boincer umatlas      9352 Jan 14 00:52 runtime_log.err
[2026-01-14 01:18:28] -rw-------. 1 boincer umatlas       654 Jan 14 00:52 36LNDm2Z1z8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmiioKDmiczaBo.diag
[2026-01-14 01:18:28] -rw-r--r--. 1 boincer umatlas      6839 Jan 14 01:13 init_data.xml
[2026-01-14 01:18:28] -rw-r--r--. 1 boincer umatlas      8192 Jan 14 01:18 boinc_mmap_file
[2026-01-14 01:18:28] -rw-r--r--. 1 boincer umatlas        27 Jan 14 01:18 wrapper_checkpoint.txt
[2026-01-14 01:18:28] -rw-r--r--. 1 boincer umatlas     22223 Jan 14 01:18 stderr.txt
[2026-01-14 01:18:28] HITS file was successfully produced:
[2026-01-14 01:18:28] -rw-------. 1 boincer umatlas 153495530 Jan 14 00:50 shared/HITS.pool.root.1
[2026-01-14 01:18:28]  *** Contents of shared directory: ***
[2026-01-14 01:18:28] total 736844
[2026-01-14 01:18:28] -rw-r--r--. 2 boincer umatlas 599210248 Jan 13 23:10 ATLAS.root_0
[2026-01-14 01:18:28] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 23:10 start_atlas.sh
[2026-01-14 01:18:28] -rw-r--r--. 2 boincer umatlas    592395 Jan 13 23:10 input.tar.gz
[2026-01-14 01:18:28] -rw-------. 1 boincer umatlas 153495530 Jan 14 00:50 HITS.pool.root.1
[2026-01-14 01:18:28] -rw-------. 1 boincer umatlas   1198080 Jan 14 00:52 result.tar.gz
01:18:50 (3184968): run_atlas exited; CPU time 25268.938017
01:18:50 (3184968): called boinc_finish(0)

</stderr_txt>
]]>

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