Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:20:06 (3088236): wrapper (7.7.26015): starting
22:20:06 (3088236): wrapper: running run_atlas (--nthreads 10)
[2026-01-13 22:20:06] Arguments: --nthreads 10
[2026-01-13 22:20:06] Threads: 10
[2026-01-13 22:20:06] Checking for CVMFS
[2026-01-13 22:20:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-13 22:20:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-13 22:20:07] Running cvmfs_config stat atlas.cern.ch
[2026-01-13 22:20:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-13 22:20:08] 2.13.3.0 9724 30193 243004 155116 1 57 31933003 40960000 13204 16776704 0 22748138 99.604 20304373 37083 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-13 22:20:08] CVMFS is ok
[2026-01-13 22:20:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 22:20:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 22:20:08] Further information can be found at the LHC@home message board.
[2026-01-13 22:20:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 22:20:08] Checking for apptainer binary...
[2026-01-13 22:20:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-13 22:20:08] Running /usr/bin/apptainer --version
[2026-01-13 22:20:08] apptainer version 1.4.5-2.el9
[2026-01-13 22:20:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 22:20:09] c-210-33-3.aglt2.org
[2026-01-13 22:20:09] apptainer works
[2026-01-13 22:20:09] Set ATHENA_PROC_NUMBER=10
[2026-01-13 22:20:09] Set ATHENA_CORE_NUMBER=10
[2026-01-13 22:20:09] Starting ATLAS job with PandaID=6969274478
[2026-01-13 22:20:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 23:52:36]  *** The last 200 lines of the pilot log: ***
[2026-01-13 23:52:36] 2026-01-14 04:51:36,375 | INFO     | time since job start (5433s) is within the limit (349056.0s)
[2026-01-13 23:52:36] 2026-01-14 04:51:36,390 | INFO     | monitor loop #391: job 0:6969274478 is in state 'finished'
[2026-01-13 23:52:36] 2026-01-14 04:51:36,390 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 23:52:36] 2026-01-14 04:51:38,382 | INFO     | time since job start (5435s) is within the limit (349056.0s)
[2026-01-13 23:52:36] 2026-01-14 04:51:38,897 | INFO     | monitor loop #392: job 0:6969274478 is in state 'finished'
[2026-01-13 23:52:36] 2026-01-14 04:51:38,898 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 23:52:36] 2026-01-14 04:51:40,391 | INFO     | time since job start (5437s) is within the limit (349056.0s)
[2026-01-13 23:52:36] 2026-01-14 04:51:41,412 | INFO     | monitor loop #393: job 0:6969274478 is in state 'finished'
[2026-01-13 23:52:36] 2026-01-14 04:51:41,413 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 23:52:36] 2026-01-14 04:51:42,407 | INFO     | time since job start (5439s) is within the limit (349056.0s)
[2026-01-13 23:52:36] 2026-01-14 04:51:43,917 | INFO     | monitor loop #394: job 0:6969274478 is in state 'finished'
[2026-01-13 23:52:36] 2026-01-14 04:51:43,918 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 23:52:36] 2026-01-14 04:51:44,414 | INFO     | time since job start (5441s) is within the limit (349056.0s)
[2026-01-13 23:52:36] 2026-01-14 04:51:46,422 | INFO     | monitor loop #395: job 0:6969274478 is in state 'finished'
[2026-01-13 23:52:36] 2026-01-14 04:51:46,423 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 23:52:36] 2026-01-14 04:51:46,433 | INFO     | time since job start (5443s) is within the limit (349056.0s)
[2026-01-13 23:52:36] 2026-01-14 04:51:46,433 | INFO     | 5448s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-13 23:52:36] 2026-01-14 04:51:48,446 | INFO     | time since job start (5445s) is within the limit (349056.0s)
[2026-01-13 23:52:36] 2026-01-14 04:51:48,927 | INFO     | monitor loop #396: job 0:6969274478 is in state 'finished'
[2026-01-13 23:52:36] 2026-01-14 04:51:48,928 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 23:52:36] 2026-01-14 04:51:50,455 | INFO     | time since job start (5447s) is within the limit (349056.0s)
[2026-01-13 23:52:36] 2026-01-14 04:51:51,432 | INFO     | monitor loop #397: job 0:6969274478 is in state 'finished'
[2026-01-13 23:52:36] 2026-01-14 04:51:51,433 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 23:52:36] 2026-01-14 04:51:52,462 | INFO     | time since job start (5449s) is within the limit (349056.0s)
[2026-01-13 23:52:36] 2026-01-14 04:51:53,936 | INFO     | monitor loop #398: job 0:6969274478 is in state 'finished'
[2026-01-13 23:52:36] 2026-01-14 04:51:53,937 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 23:52:36] 2026-01-14 04:51:54,469 | INFO     | time since job start (5451s) is within the limit (349056.0s)
[2026-01-13 23:52:36] 2026-01-14 04:51:55,986 | INFO     | PID=3095302 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 23:52:36] 2026-01-14 04:51:55,995 | INFO     | .. there are 10 such processes running
[2026-01-13 23:52:36] 2026-01-14 04:51:56,453 | INFO     | monitor loop #399: job 0:6969274478 is in state 'finished'
[2026-01-13 23:52:36] 2026-01-14 04:51:56,453 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 23:52:36] 2026-01-14 04:51:56,996 | INFO     | time since job start (5453s) is within the limit (349056.0s)
[2026-01-13 23:52:36] 2026-01-14 04:51:58,969 | INFO     | monitor loop #400: job 0:6969274478 is in state 'finished'
[2026-01-13 23:52:36] 2026-01-14 04:51:58,970 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 23:52:36] 2026-01-14 04:51:59,005 | INFO     | time since job start (5456s) is within the limit (349056.0s)
[2026-01-13 23:52:36] 2026-01-14 04:52:01,020 | INFO     | time since job start (5458s) is within the limit (349056.0s)
[2026-01-13 23:52:36] 2026-01-14 04:52:01,496 | INFO     | monitor loop #401: job 0:6969274478 is in state 'finished'
[2026-01-13 23:52:36] 2026-01-14 04:52:01,496 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 23:52:36] 2026-01-14 04:52:02,009 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-13 23:52:36] 2026-01-14 04:52:02,064 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3055.2131964285722
[2026-01-13 23:52:36] 2026-01-14 04:52:02,114 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6969274478/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 23:52:36] 2026-01-14 04:52:02,146 | INFO     | extracted standard info from prmon json
[2026-01-13 23:52:36] 2026-01-14 04:52:02,146 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 23:52:36] 2026-01-14 04:52:02,146 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 23:52:36] 2026-01-14 04:52:02,158 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 23:52:36] 2026-01-14 04:52:02,158 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 23:52:36] 2026-01-14 04:52:02,160 | INFO     | fitting pss+swap vs Time
[2026-01-13 23:52:36] 2026-01-14 04:52:02,160 | INFO     | sum of square deviations: 158795455.98750016
[2026-01-13 23:52:36] 2026-01-14 04:52:02,160 | INFO     | sum of deviations: -13565726983.650003
[2026-01-13 23:52:36] 2026-01-14 04:52:02,161 | INFO     | mean x: 1768363713.1125
[2026-01-13 23:52:36] 2026-01-14 04:52:02,161 | INFO     | mean y: 2842599.85
[2026-01-13 23:52:36] 2026-01-14 04:52:02,161 | INFO     | intersect: 151072274597.74103
[2026-01-13 23:52:36] 2026-01-14 04:52:02,161 | INFO     | chi2: 0.13199031846823098
[2026-01-13 23:52:36] 2026-01-14 04:52:02,161 | INFO     | current memory leak: -85.43 B/s (using 80 data points, chi2=0.13)
[2026-01-13 23:52:36] 2026-01-14 04:52:02,186 | INFO     | could have reported an average CPU frequency of 3022 MHz (6 samples)
[2026-01-13 23:52:36] 2026-01-14 04:52:02,186 | INFO     | ..............................
[2026-01-13 23:52:36] 2026-01-14 04:52:02,186 | INFO     | . Timing measurements:
[2026-01-13 23:52:36] 2026-01-14 04:52:02,186 | INFO     | . get job = 0 s
[2026-01-13 23:52:36] 2026-01-14 04:52:02,186 | INFO     | . initial setup = 5 s
[2026-01-13 23:52:36] 2026-01-14 04:52:02,186 | INFO     | . payload setup = 40 s
[2026-01-13 23:52:36] 2026-01-14 04:52:02,186 | INFO     | . stage-in = 0 s
[2026-01-13 23:52:36] 2026-01-14 04:52:02,186 | INFO     | . payload execution = 5316 s
[2026-01-13 23:52:36] 2026-01-14 04:52:02,186 | INFO     | . stage-out = 2 s
[2026-01-13 23:52:36] 2026-01-14 04:52:02,186 | INFO     | . log creation = 0 s
[2026-01-13 23:52:36] 2026-01-14 04:52:02,187 | INFO     | ..............................
[2026-01-13 23:52:36] 2026-01-14 04:52:02,581 | INFO     | 
[2026-01-13 23:52:36] 2026-01-14 04:52:02,581 | INFO     | job summary report
[2026-01-13 23:52:36] 2026-01-14 04:52:02,581 | INFO     | --------------------------------------------------
[2026-01-13 23:52:36] 2026-01-14 04:52:02,581 | INFO     | PanDA job id: 6969274478
[2026-01-13 23:52:36] 2026-01-14 04:52:02,581 | INFO     | task id: 48215263
[2026-01-13 23:52:36] 2026-01-14 04:52:02,581 | INFO     | errors: (none)
[2026-01-13 23:52:36] 2026-01-14 04:52:02,581 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 23:52:36] 2026-01-14 04:52:02,581 | INFO     | pilot state: finished 
[2026-01-13 23:52:36] 2026-01-14 04:52:02,581 | INFO     | transexitcode: 0
[2026-01-13 23:52:36] 2026-01-14 04:52:02,582 | INFO     | exeerrorcode: 0
[2026-01-13 23:52:36] 2026-01-14 04:52:02,582 | INFO     | exeerrordiag: 
[2026-01-13 23:52:36] 2026-01-14 04:52:02,582 | INFO     | exitcode: 0
[2026-01-13 23:52:36] 2026-01-14 04:52:02,582 | INFO     | exitmsg: OK
[2026-01-13 23:52:36] 2026-01-14 04:52:02,582 | INFO     | cpuconsumptiontime: 24433 s
[2026-01-13 23:52:36] 2026-01-14 04:52:02,582 | INFO     | nevents: 400
[2026-01-13 23:52:36] 2026-01-14 04:52:02,582 | INFO     | neventsw: 0
[2026-01-13 23:52:36] 2026-01-14 04:52:02,582 | INFO     | pid: 3102562
[2026-01-13 23:52:36] 2026-01-14 04:52:02,582 | INFO     | pgrp: 3102562
[2026-01-13 23:52:36] 2026-01-14 04:52:02,582 | INFO     | corecount: 10
[2026-01-13 23:52:36] 2026-01-14 04:52:02,582 | INFO     | event service: False
[2026-01-13 23:52:36] 2026-01-14 04:52:02,582 | INFO     | sizes: {0: 2283774, 1: 2283973, 12: 2283973, 23: 2284001, 26: 2284291, 34: 2284319, 5360: 2310980, 5361: 2310979, 5364: 2320033, 5365: 2320089, 5394: 2320283}
[2026-01-13 23:52:36] 2026-01-14 04:52:02,582 | INFO     | --------------------------------------------------
[2026-01-13 23:52:36] 2026-01-14 04:52:02,582 | INFO     | 
[2026-01-13 23:52:36] 2026-01-14 04:52:02,582 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-13 23:52:36] 2026-01-14 04:52:02,628 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 23:52:36] 2026-01-14 04:52:02,628 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 23:52:36] 2026-01-14 04:52:02,628 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 23:52:36] 2026-01-14 04:52:02,628 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 23:52:36] 2026-01-14 04:52:02,628 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 23:52:36] 2026-01-14 04:52:02,628 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 23:52:36] 2026-01-14 04:52:02,629 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 23:52:36] 2026-01-14 04:52:02,629 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 23:52:36] 2026-01-14 04:52:02,629 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 23:52:36] 2026-01-14 04:52:02,629 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 23:52:36] 2026-01-14 04:52:02,629 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 23:52:36] 2026-01-14 04:52:02,629 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 23:52:36] 2026-01-14 04:52:02,629 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 23:52:36] 2026-01-14 04:52:02,629 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 23:52:36] 2026-01-14 04:52:02,629 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 23:52:36] 2026-01-14 04:52:02,629 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 23:52:36] 2026-01-14 04:52:02,629 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 23:52:36] 2026-01-14 04:52:02,629 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 23:52:36] 2026-01-14 04:52:02,651 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 23:52:36] 2026-01-14 04:52:02,651 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 23:52:36] 2026-01-14 04:52:02,651 | INFO     | job 6969274478 has completed (purged errors)
[2026-01-13 23:52:36] 2026-01-14 04:52:02,651 | INFO     | overall cleanup function is called
[2026-01-13 23:52:36] 2026-01-14 04:52:03,659 | INFO     | --- collectZombieJob: --- 10, [3102562]
[2026-01-13 23:52:36] 2026-01-14 04:52:03,660 | INFO     | zombie collector waiting for pid 3102562
[2026-01-13 23:52:36] 2026-01-14 04:52:03,660 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 23:52:36] 2026-01-14 04:52:03,660 | INFO     | collected zombie processes
[2026-01-13 23:52:36] 2026-01-14 04:52:03,660 | INFO     | will attempt to kill all subprocesses of pid=3102562
[2026-01-13 23:52:36] 2026-01-14 04:52:03,959 | INFO     | process IDs to be killed: [3102562] (in reverse order)
[2026-01-13 23:52:36] 2026-01-14 04:52:04,149 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 23:52:36] 2026-01-14 04:52:04,150 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 23:52:36] 2026-01-14 04:52:04,166 | INFO     | did not find any defunct processes belonging to 3102562
[2026-01-13 23:52:36] 2026-01-14 04:52:04,182 | INFO     | did not find any defunct processes belonging to 3102562
[2026-01-13 23:52:36] 2026-01-14 04:52:04,182 | INFO     | ready for new job
[2026-01-13 23:52:36] 2026-01-14 04:52:04,182 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 23:52:36] 2026-01-14 04:52:04,184 | INFO     | ***************************************
[2026-01-13 23:52:36] 2026-01-14 04:52:04,184 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 23:52:36] 2026-01-14 04:52:04,184 | INFO     | ***************************************
[2026-01-13 23:52:36] 2026-01-14 04:52:04,184 | INFO     | 
[2026-01-13 23:52:36] 2026-01-14 04:52:04,191 | INFO     | architecture information:
[2026-01-13 23:52:36] 2026-01-14 04:52:04,195 | INFO     | executing command: cat /etc/os-release
[2026-01-13 23:52:36] 2026-01-14 04:52:04,237 | INFO     | cat /etc/os-release:
[2026-01-13 23:52:36] NAME="CentOS Linux"
[2026-01-13 23:52:36] VERSION="7 (Core)"
[2026-01-13 23:52:36] ID="centos"
[2026-01-13 23:52:36] ID_LIKE="rhel fedora"
[2026-01-13 23:52:36] VERSION_ID="7"
[2026-01-13 23:52:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 23:52:36] ANSI_COLOR="0;31"
[2026-01-13 23:52:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 23:52:36] HOME_URL="https://www.centos.org/"
[2026-01-13 23:52:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 23:52:36] 
[2026-01-13 23:52:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 23:52:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 23:52:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 23:52:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 23:52:36] 
[2026-01-13 23:52:36] 2026-01-14 04:52:04,237 | INFO     | ***************************************
[2026-01-13 23:52:36] 2026-01-14 04:52:04,741 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-13 23:52:36] 2026-01-14 04:52:04,811 | INFO     | sufficient remaining disk space (71707918336 B)
[2026-01-13 23:52:36] 2026-01-14 04:52:04,811 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 23:52:36] 2026-01-14 04:52:04,812 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 23:52:36] 2026-01-14 04:52:04,812 | INFO     | update_server=False
[2026-01-13 23:52:36] 2026-01-14 04:52:04,812 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 23:52:36] 2026-01-14 04:52:05,029 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 23:52:36] 2026-01-14 04:52:05,030 | INFO     | aborting loop
[2026-01-13 23:52:36] 2026-01-14 04:52:05,324 | INFO     | all job control threads have been joined
[2026-01-13 23:52:36] 2026-01-14 04:52:05,449 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 23:52:36] 2026-01-14 04:52:05,579 | INFO     | all payload control threads have been joined
[2026-01-13 23:52:36] 2026-01-14 04:52:05,727 | INFO     | all data control threads have been joined
[2026-01-13 23:52:36] 2026-01-14 04:52:05,820 | INFO     | [job] retrieve thread has finished
[2026-01-13 23:52:36] 2026-01-14 04:52:05,989 | INFO     | [data] copytool_in thread has finished
[2026-01-13 23:52:36] 2026-01-14 04:52:05,998 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 23:52:36] 2026-01-14 04:52:06,005 | INFO     | [job] validate thread has finished
[2026-01-13 23:52:36] 2026-01-14 04:52:06,034 | INFO     | [payload] validate_post thread has finished
[2026-01-13 23:52:36] 2026-01-14 04:52:06,036 | INFO     | [job] job monitor thread has finished
[2026-01-13 23:52:36] 2026-01-14 04:52:06,133 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 23:52:36] 2026-01-14 04:52:06,303 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 23:52:36] 2026-01-14 04:52:06,330 | INFO     | [job] control thread has finished
[2026-01-13 23:52:36] 2026-01-14 04:52:06,559 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 23:52:36] 2026-01-14 04:52:06,588 | INFO     | [payload] control thread has finished
[2026-01-13 23:52:36] 2026-01-14 04:52:06,733 | INFO     | [data] control thread has finished
[2026-01-13 23:52:36] 2026-01-14 04:52:06,853 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 23:52:36] 2026-01-14 04:52:06,874 | INFO     | [payload] failed_post thread has finished
[2026-01-13 23:52:36] 2026-01-14 04:52:07,456 | INFO     | [data] copytool_out thread has finished
[2026-01-13 23:52:36] 2026-01-14 04:52:07,595 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 23:52:36] 2026-01-14 04:52:08,601 | INFO     | [job] queue monitor thread has finished
[2026-01-13 23:52:36] 2026-01-14 04:52:10,572 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 23:52:36] 2026-01-14 04:52:12,344 | INFO     | [monitor] cgroup control has ended
[2026-01-13 23:52:36] 2026-01-14 04:52:13,283 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139679958357824)>', '<ExcThread(monitor, started 139679600973568)>']
[2026-01-13 23:52:36] 2026-01-14 04:52:18,309 | INFO     | all workflow threads have been joined
[2026-01-13 23:52:36] 2026-01-14 04:52:18,310 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 23:52:36] 2026-01-14 04:52:18,311 | INFO     | traces error code: 0
[2026-01-13 23:52:36] 2026-01-14 04:52:18,311 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 23:52:36] 2026-01-14 04:52:35,909 | INFO     | PID=3095302 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 23:52:36] 2026-01-14 04:52:35,909 | INFO     | .. there are 10 such processes running
[2026-01-13 23:52:36] 2026-01-14 04:52:35,910 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 23:52:36] 2026-01-14 04:52:35,910 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 23:52:36] 2026-01-14 04:52:35,910 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 23:52:36] 2026-01-14 04:52:35,910 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 23:52:36] 2026-01-14 04:52:35,910 | INFO     | [monitor] control thread has ended
[2026-01-13 23:52:36] 2026-01-14 04:52:36,036 [wrapper] ==== pilot stdout END ====
[2026-01-13 23:52:36] 2026-01-14 04:52:36,039 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 23:52:36] 2026-01-14 04:52:36,041 [wrapper] pilotpid: 3095302
[2026-01-13 23:52:36] 2026-01-14 04:52:36,043 [wrapper] Pilot exit status: 0
[2026-01-13 23:52:36] 2026-01-14 04:52:36,234 [wrapper] pandaids: 6969274478
[2026-01-13 23:52:36] 2026-01-14 04:52:36,402 [wrapper] cleanup supervisor_pilot 3290194 3095303
[2026-01-13 23:52:36] 2026-01-14 04:52:36,404 [wrapper] Test setup, not cleaning
[2026-01-13 23:52:36] 2026-01-14 04:52:36,407 [wrapper] apfmon messages muted
[2026-01-13 23:52:36] 2026-01-14 04:52:36,417 [wrapper] ==== wrapper stdout END ====
[2026-01-13 23:52:36] 2026-01-14 04:52:36,458 [wrapper] ==== wrapper stderr END ====
[2026-01-13 23:52:36]  *** Error codes and diagnostics ***
[2026-01-13 23:52:36]     "exeErrorCode": 0,
[2026-01-13 23:52:36]     "exeErrorDiag": "",
[2026-01-13 23:52:36]     "pilotErrorCode": 0,
[2026-01-13 23:52:36]     "pilotErrorDiag": "",
[2026-01-13 23:52:36]  *** Listing of results directory ***
[2026-01-13 23:52:36] total 732744
[2026-01-13 23:52:36] -rw-r--r--. 1 boincer umatlas    579449 Jan 13 18:46 pilot3.tar.gz
[2026-01-13 23:52:36] -rwx------. 1 boincer umatlas     36322 Jan 13 18:50 runpilot2-wrapper.sh
[2026-01-13 23:52:36] -rw-r--r--. 1 boincer umatlas      5112 Jan 13 18:54 queuedata.json
[2026-01-13 23:52:36] -rw-r--r--. 1 boincer umatlas       100 Jan 13 22:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 23:52:36] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 13 22:20 run_atlas
[2026-01-13 23:52:36] -rw-r--r--. 1 boincer umatlas       105 Jan 13 22:20 job.xml
[2026-01-13 23:52:36] -rw-r--r--. 2 boincer umatlas 593126945 Jan 13 22:20 EVNT.32794306._000342.pool.root.1
[2026-01-13 23:52:36] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 22:20 start_atlas.sh
[2026-01-13 23:52:36] drwxrwx--x. 2 boincer umatlas      4096 Jan 13 22:20 shared
[2026-01-13 23:52:36] -rw-r--r--. 2 boincer umatlas    592393 Jan 13 22:20 input.tar.gz
[2026-01-13 23:52:36] -rw-r--r--. 1 boincer umatlas         0 Jan 13 22:20 boinc_lockfile
[2026-01-13 23:52:36] -rw-r--r--. 1 boincer umatlas      2505 Jan 13 22:20 pandaJob.out
[2026-01-13 23:52:36] -rw-------. 1 boincer umatlas        57 Jan 13 22:20 setup.sh.local
[2026-01-13 23:52:36] -rw-------. 1 boincer umatlas    997226 Jan 13 22:20 agis_schedconf.cvmfs.json
[2026-01-13 23:52:36] -rw-------. 1 boincer umatlas   1516246 Jan 13 22:21 agis_ddmendpoints.agis.ALL.json
[2026-01-13 23:52:36] drwx------. 5 boincer umatlas      4096 Jan 13 22:21 pilot3
[2026-01-13 23:52:36] -rw-r--r--. 1 boincer umatlas      6839 Jan 13 23:46 init_data.xml
[2026-01-13 23:52:36] -rw-------. 1 boincer umatlas 151017711 Jan 13 23:50 HITS.48215263._008537.pool.root.1
[2026-01-13 23:52:36] -rw-r--r--. 1 boincer umatlas       530 Jan 13 23:50 boinc_task_state.xml
[2026-01-13 23:52:36] -rw-------. 1 boincer umatlas      1040 Jan 13 23:51 memory_monitor_summary.json
[2026-01-13 23:52:36] -rw-------. 1 boincer umatlas    364724 Jan 13 23:51 log.48215263._008537.job.log.tgz.1
[2026-01-13 23:52:36] -rw-------. 1 boincer umatlas      7826 Jan 13 23:52 heartbeat.json
[2026-01-13 23:52:36] -rw-------. 1 boincer umatlas       823 Jan 13 23:52 pilotlog.txt
[2026-01-13 23:52:36] -rw-------. 1 boincer umatlas        95 Jan 13 23:52 pilot_heartbeat.json
[2026-01-13 23:52:36] -rw-------. 1 boincer umatlas    767575 Jan 13 23:52 log.48215263._008537.job.log.1
[2026-01-13 23:52:36] -rw-r--r--. 1 boincer umatlas      8192 Jan 13 23:52 boinc_mmap_file
[2026-01-13 23:52:36] -rw-r--r--. 1 boincer umatlas        27 Jan 13 23:52 wrapper_checkpoint.txt
[2026-01-13 23:52:36] -rw-------. 1 boincer umatlas       357 Jan 13 23:52 output.list
[2026-01-13 23:52:36] -rw-r--r--. 1 boincer umatlas       620 Jan 13 23:52 runtime_log
[2026-01-13 23:52:36] -rw-------. 1 boincer umatlas   1146880 Jan 13 23:52 result.tar.gz
[2026-01-13 23:52:36] -rw-r--r--. 1 boincer umatlas      9354 Jan 13 23:52 runtime_log.err
[2026-01-13 23:52:36] -rw-------. 1 boincer umatlas       655 Jan 13 23:52 Ag6LDm2K3z8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmGHjKDmmnO9tm.diag
[2026-01-13 23:52:36] -rw-r--r--. 1 boincer umatlas     22449 Jan 13 23:52 stderr.txt
[2026-01-13 23:52:37] HITS file was successfully produced:
[2026-01-13 23:52:37] -rw-------. 1 boincer umatlas 151017711 Jan 13 23:50 shared/HITS.pool.root.1
[2026-01-13 23:52:37]  *** Contents of shared directory: ***
[2026-01-13 23:52:37] total 728432
[2026-01-13 23:52:37] -rw-r--r--. 2 boincer umatlas 593126945 Jan 13 22:20 ATLAS.root_0
[2026-01-13 23:52:37] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 22:20 start_atlas.sh
[2026-01-13 23:52:37] -rw-r--r--. 2 boincer umatlas    592393 Jan 13 22:20 input.tar.gz
[2026-01-13 23:52:37] -rw-------. 1 boincer umatlas 151017711 Jan 13 23:50 HITS.pool.root.1
[2026-01-13 23:52:37] -rw-------. 1 boincer umatlas   1146880 Jan 13 23:52 result.tar.gz
23:52:38 (3088236): run_atlas exited; CPU time 24514.898285
23:52:38 (3088236): called boinc_finish(0)

</stderr_txt>
]]>

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