Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:30:57 (5641): wrapper (7.7.26015): starting
22:30:57 (5641): wrapper: running run_atlas (--nthreads 12)
[2026-01-13 22:30:57] Arguments: --nthreads 12
[2026-01-13 22:30:57] Threads: 12
[2026-01-13 22:30:57] Checking for CVMFS
[2026-01-13 22:30:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-13 22:30:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-13 22:30:57] Running cvmfs_config stat atlas.cern.ch
[2026-01-13 22:30:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-13 22:30:57] 2.11.2.0 30551 187645 96276 155116 3 57 11422690 20275201 1 130560 0 73276827 99.894 11142318 29302 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-13 22:30:57] CVMFS is ok
[2026-01-13 22:30:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 22:30:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 22:30:57] Further information can be found at the LHC@home message board.
[2026-01-13 22:30:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 22:30:57] Checking for apptainer binary...
[2026-01-13 22:30:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-13 22:30:57] Running /usr/bin/apptainer --version
[2026-01-13 22:30:57] apptainer version 1.3.2-1.el7
[2026-01-13 22:30:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 22:30:59] c-205-16.aglt2.org
[2026-01-13 22:30:59] apptainer works
[2026-01-13 22:30:59] Set ATHENA_PROC_NUMBER=12
[2026-01-13 22:30:59] Set ATHENA_CORE_NUMBER=12
[2026-01-13 22:30:59] Starting ATLAS job with PandaID=6969274300
[2026-01-13 22:30:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 23:20:25]  *** The last 200 lines of the pilot log: ***
[2026-01-13 23:20:25]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6969274300/log.48215263._008360.job.log.tgz.1
[2026-01-13 23:20:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/59/db/log.48215263._008360.job.log.tgz.1
[2026-01-13 23:20:25]  workdir=None
[2026-01-13 23:20:25] ]
[2026-01-13 23:20:25] 2026-01-14 04:19:23,511 | INFO     | transferring file log.48215263._008360.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6969274300/log.48215263._008360.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-13 23:20:25] 2026-01-14 04:19:23,511 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6969274300/log.48215263._008360.job.log.tgz.1 /tmp/boinchome/slots/0/log.48215263._008360.job
[2026-01-13 23:20:25] 2026-01-14 04:19:23,533 | INFO     | adding to output.list: log.48215263._008360.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/59/db/log.48215263._008360.job.log.tg
[2026-01-13 23:20:25] 2026-01-14 04:19:23,534 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-13 23:20:25] 2026-01-14 04:19:23,534 | INFO     | summary of transferred files:
[2026-01-13 23:20:25] 2026-01-14 04:19:23,534 | INFO     |  -- lfn=log.48215263._008360.job.log.tgz.1, status_code=0, status=transferred
[2026-01-13 23:20:25] 2026-01-14 04:19:23,534 | INFO     | stage-out finished correctly
[2026-01-13 23:20:25] 2026-01-14 04:19:24,100 | INFO     | monitor loop #220: job 0:6969274300 is in state 'finished'
[2026-01-13 23:20:25] 2026-01-14 04:19:24,100 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 23:20:25] 2026-01-14 04:19:25,282 | INFO     | time since job start (2891s) is within the limit (349056.0s)
[2026-01-13 23:20:25] 2026-01-14 04:19:26,602 | INFO     | monitor loop #221: job 0:6969274300 is in state 'finished'
[2026-01-13 23:20:25] 2026-01-14 04:19:26,602 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 23:20:25] 2026-01-14 04:19:27,090 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-13 23:20:25] 2026-01-14 04:19:27,287 | INFO     | time since job start (2893s) is within the limit (349056.0s)
[2026-01-13 23:20:25] 2026-01-14 04:19:28,538 | INFO     | job 6969274300 has state=finished
[2026-01-13 23:20:25] 2026-01-14 04:19:28,538 | INFO     | preparing for final server update for job 6969274300 in state='finished'
[2026-01-13 23:20:25] 2026-01-14 04:19:28,538 | INFO     | this job has now completed (state=finished)
[2026-01-13 23:20:25] 2026-01-14 04:19:28,539 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-13 23:20:25] 2026-01-14 04:19:28,539 | INFO     | log transfer has been attempted: DONE
[2026-01-13 23:20:25] 2026-01-14 04:19:28,539 | INFO     | job 6969274300 has finished - writing final server update
[2026-01-13 23:20:25] 2026-01-14 04:19:28,539 | INFO     | total number of processed events: 400 (read)
[2026-01-13 23:20:25] 2026-01-14 04:19:28,541 | INFO     | executing command: lscpu
[2026-01-13 23:20:25] 2026-01-14 04:19:28,572 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-13 23:20:25] 2026-01-14 04:19:29,105 | INFO     | monitor loop #222: job 0:6969274300 is in state 'finished'
[2026-01-13 23:20:25] 2026-01-14 04:19:29,105 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 23:20:25] 2026-01-14 04:19:29,292 | INFO     | time since job start (2895s) is within the limit (349056.0s)
[2026-01-13 23:20:25] 2026-01-14 04:19:31,297 | INFO     | time since job start (2897s) is within the limit (349056.0s)
[2026-01-13 23:20:25] 2026-01-14 04:19:31,608 | INFO     | monitor loop #223: job 0:6969274300 is in state 'finished'
[2026-01-13 23:20:25] 2026-01-14 04:19:31,608 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 23:20:25] 2026-01-14 04:19:32,416 | INFO     | PID=9426 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-13 23:20:25] 2026-01-14 04:19:33,416 | INFO     | time since job start (2899s) is within the limit (349056.0s)
[2026-01-13 23:20:25] 2026-01-14 04:19:34,111 | INFO     | monitor loop #224: job 0:6969274300 is in state 'finished'
[2026-01-13 23:20:25] 2026-01-14 04:19:34,111 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 23:20:25] 2026-01-14 04:19:34,422 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-13 23:20:25] 2026-01-14 04:19:34,426 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2026-01-13 23:20:25] 2026-01-14 04:19:34,428 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6969274300/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 23:20:25] 2026-01-14 04:19:34,430 | INFO     | extracted standard info from prmon json
[2026-01-13 23:20:25] 2026-01-14 04:19:34,430 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 23:20:25] 2026-01-14 04:19:34,430 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 23:20:25] 2026-01-14 04:19:34,430 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 23:20:25] 2026-01-14 04:19:34,430 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 23:20:25] 2026-01-14 04:19:34,432 | INFO     | fitting pss+swap vs Time
[2026-01-13 23:20:25] 2026-01-14 04:19:34,432 | INFO     | sum of square deviations: 19832930.0
[2026-01-13 23:20:25] 2026-01-14 04:19:34,433 | INFO     | sum of deviations: 407287270.50000006
[2026-01-13 23:20:25] 2026-01-14 04:19:34,433 | INFO     | mean x: 1768362997.5
[2026-01-13 23:20:25] 2026-01-14 04:19:34,433 | INFO     | mean y: 3014044.275
[2026-01-13 23:20:25] 2026-01-14 04:19:34,433 | INFO     | intersect: -36311929764.07674
[2026-01-13 23:20:25] 2026-01-14 04:19:34,433 | INFO     | chi2: 0.0014346287453882705
[2026-01-13 23:20:25] 2026-01-14 04:19:34,433 | INFO     | current memory leak: 20.54 B/s (using 40 data points, chi2=0.00)
[2026-01-13 23:20:25] 2026-01-14 04:19:34,434 | INFO     | could have reported an average CPU frequency of 1908 MHz (5 samples)
[2026-01-13 23:20:25] 2026-01-14 04:19:34,434 | INFO     | ..............................
[2026-01-13 23:20:25] 2026-01-14 04:19:34,434 | INFO     | . Timing measurements:
[2026-01-13 23:20:25] 2026-01-14 04:19:34,434 | INFO     | . get job = 0 s
[2026-01-13 23:20:25] 2026-01-14 04:19:34,434 | INFO     | . initial setup = 2 s
[2026-01-13 23:20:25] 2026-01-14 04:19:34,434 | INFO     | . payload setup = 7 s
[2026-01-13 23:20:25] 2026-01-14 04:19:34,434 | INFO     | . stage-in = 0 s
[2026-01-13 23:20:25] 2026-01-14 04:19:34,434 | INFO     | . payload execution = 2861 s
[2026-01-13 23:20:25] 2026-01-14 04:19:34,435 | INFO     | . stage-out = 0 s
[2026-01-13 23:20:25] 2026-01-14 04:19:34,435 | INFO     | . log creation = 0 s
[2026-01-13 23:20:25] 2026-01-14 04:19:34,435 | INFO     | ..............................
[2026-01-13 23:20:25] 2026-01-14 04:19:34,643 | INFO     | 
[2026-01-13 23:20:25] 2026-01-14 04:19:34,644 | INFO     | job summary report
[2026-01-13 23:20:25] 2026-01-14 04:19:34,644 | INFO     | --------------------------------------------------
[2026-01-13 23:20:25] 2026-01-14 04:19:34,644 | INFO     | PanDA job id: 6969274300
[2026-01-13 23:20:25] 2026-01-14 04:19:34,644 | INFO     | task id: 48215263
[2026-01-13 23:20:25] 2026-01-14 04:19:34,644 | INFO     | errors: (none)
[2026-01-13 23:20:25] 2026-01-14 04:19:34,644 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 23:20:25] 2026-01-14 04:19:34,645 | INFO     | pilot state: finished 
[2026-01-13 23:20:25] 2026-01-14 04:19:34,645 | INFO     | transexitcode: 0
[2026-01-13 23:20:25] 2026-01-14 04:19:34,645 | INFO     | exeerrorcode: 0
[2026-01-13 23:20:25] 2026-01-14 04:19:34,645 | INFO     | exeerrordiag: 
[2026-01-13 23:20:25] 2026-01-14 04:19:34,645 | INFO     | exitcode: 0
[2026-01-13 23:20:25] 2026-01-14 04:19:34,645 | INFO     | exitmsg: OK
[2026-01-13 23:20:25] 2026-01-14 04:19:34,646 | INFO     | cpuconsumptiontime: 30283 s
[2026-01-13 23:20:25] 2026-01-14 04:19:34,646 | INFO     | nevents: 400
[2026-01-13 23:20:25] 2026-01-14 04:19:34,646 | INFO     | neventsw: 0
[2026-01-13 23:20:25] 2026-01-14 04:19:34,646 | INFO     | pid: 15793
[2026-01-13 23:20:25] 2026-01-14 04:19:34,646 | INFO     | pgrp: 15793
[2026-01-13 23:20:25] 2026-01-14 04:19:34,646 | INFO     | corecount: 12
[2026-01-13 23:20:25] 2026-01-14 04:19:34,647 | INFO     | event service: False
[2026-01-13 23:20:25] 2026-01-14 04:19:34,647 | INFO     | sizes: {0: 2283945, 5: 2284207, 11: 2284263, 2871: 2309530, 2873: 2318528, 2876: 2318584, 2884: 2318938}
[2026-01-13 23:20:25] 2026-01-14 04:19:34,647 | INFO     | --------------------------------------------------
[2026-01-13 23:20:25] 2026-01-14 04:19:34,647 | INFO     | 
[2026-01-13 23:20:25] 2026-01-14 04:19:34,647 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-13 23:20:25] 2026-01-14 04:19:34,672 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 23:20:25] 2026-01-14 04:19:34,672 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 23:20:25] 2026-01-14 04:19:34,672 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 23:20:25] 2026-01-14 04:19:34,673 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 23:20:25] 2026-01-14 04:19:34,673 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 23:20:25] 2026-01-14 04:19:34,673 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 23:20:25] 2026-01-14 04:19:34,673 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 23:20:25] 2026-01-14 04:19:34,673 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 23:20:25] 2026-01-14 04:19:34,673 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 23:20:25] 2026-01-14 04:19:34,674 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 23:20:25] 2026-01-14 04:19:34,674 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 23:20:25] 2026-01-14 04:19:34,674 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 23:20:25] 2026-01-14 04:19:34,674 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 23:20:25] 2026-01-14 04:19:34,674 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 23:20:25] 2026-01-14 04:19:34,674 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 23:20:25] 2026-01-14 04:19:34,675 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 23:20:25] 2026-01-14 04:19:34,675 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 23:20:25] 2026-01-14 04:19:34,675 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 23:20:25] 2026-01-14 04:19:34,675 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 23:20:25] 2026-01-14 04:19:34,675 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 23:20:25] 2026-01-14 04:19:34,675 | INFO     | job 6969274300 has completed (purged errors)
[2026-01-13 23:20:25] 2026-01-14 04:19:34,676 | INFO     | overall cleanup function is called
[2026-01-13 23:20:25] 2026-01-14 04:19:35,684 | INFO     | --- collectZombieJob: --- 10, [15793]
[2026-01-13 23:20:25] 2026-01-14 04:19:35,684 | INFO     | zombie collector waiting for pid 15793
[2026-01-13 23:20:25] 2026-01-14 04:19:35,684 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 23:20:25] 2026-01-14 04:19:35,684 | INFO     | collected zombie processes
[2026-01-13 23:20:25] 2026-01-14 04:19:35,684 | INFO     | will attempt to kill all subprocesses of pid=15793
[2026-01-13 23:20:25] 2026-01-14 04:19:35,776 | INFO     | process IDs to be killed: [15793] (in reverse order)
[2026-01-13 23:20:25] 2026-01-14 04:19:35,829 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 23:20:25] 2026-01-14 04:19:35,830 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 23:20:25] 2026-01-14 04:19:35,833 | INFO     | did not find any defunct processes belonging to 15793
[2026-01-13 23:20:25] 2026-01-14 04:19:35,835 | INFO     | did not find any defunct processes belonging to 15793
[2026-01-13 23:20:25] 2026-01-14 04:19:35,835 | INFO     | ready for new job
[2026-01-13 23:20:25] 2026-01-14 04:19:35,836 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 23:20:25] 2026-01-14 04:19:35,837 | INFO     | ***************************************
[2026-01-13 23:20:25] 2026-01-14 04:19:35,837 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 23:20:25] 2026-01-14 04:19:35,837 | INFO     | ***************************************
[2026-01-13 23:20:25] 2026-01-14 04:19:35,837 | INFO     | 
[2026-01-13 23:20:25] 2026-01-14 04:19:35,837 | INFO     | architecture information:
[2026-01-13 23:20:25] 2026-01-14 04:19:35,838 | INFO     | executing command: cat /etc/os-release
[2026-01-13 23:20:25] 2026-01-14 04:19:35,853 | INFO     | cat /etc/os-release:
[2026-01-13 23:20:25] NAME="CentOS Linux"
[2026-01-13 23:20:25] VERSION="7 (Core)"
[2026-01-13 23:20:25] ID="centos"
[2026-01-13 23:20:25] ID_LIKE="rhel fedora"
[2026-01-13 23:20:25] VERSION_ID="7"
[2026-01-13 23:20:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 23:20:25] ANSI_COLOR="0;31"
[2026-01-13 23:20:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 23:20:25] HOME_URL="https://www.centos.org/"
[2026-01-13 23:20:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 23:20:25] 
[2026-01-13 23:20:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 23:20:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 23:20:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 23:20:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 23:20:25] 
[2026-01-13 23:20:25] 2026-01-14 04:19:35,853 | INFO     | ***************************************
[2026-01-13 23:20:25] 2026-01-14 04:19:36,356 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-13 23:20:25] 2026-01-14 04:19:36,373 | INFO     | sufficient remaining disk space (28790751232 B)
[2026-01-13 23:20:25] 2026-01-14 04:19:36,373 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 23:20:25] 2026-01-14 04:19:36,374 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 23:20:25] 2026-01-14 04:19:36,374 | INFO     | update_server=False
[2026-01-13 23:20:25] 2026-01-14 04:19:36,374 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 23:20:25] 2026-01-14 04:19:36,374 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 23:20:25] 2026-01-14 04:19:36,573 | INFO     | all payload control threads have been joined
[2026-01-13 23:20:25] 2026-01-14 04:19:36,614 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-13 23:20:25] 2026-01-14 04:19:36,614 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-13 23:20:25] 2026-01-14 04:19:36,614 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 23:20:25] 2026-01-14 04:19:36,614 | INFO     | will abort loop
[2026-01-13 23:20:25] 2026-01-14 04:19:36,632 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 23:20:25] 2026-01-14 04:19:36,724 | INFO     | all data control threads have been joined
[2026-01-13 23:20:25] 2026-01-14 04:19:37,270 | INFO     | all job control threads have been joined
[2026-01-13 23:20:25] 2026-01-14 04:19:37,379 | INFO     | [job] retrieve thread has finished
[2026-01-13 23:20:25] 2026-01-14 04:19:37,380 | INFO     | [job] queue monitor thread has finished
[2026-01-13 23:20:25] 2026-01-14 04:19:37,578 | INFO     | [payload] control thread has finished
[2026-01-13 23:20:25] 2026-01-14 04:19:37,620 | INFO     | [job] job monitor thread has finished
[2026-01-13 23:20:25] 2026-01-14 04:19:37,678 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 23:20:25] 2026-01-14 04:19:37,703 | INFO     | [payload] validate_post thread has finished
[2026-01-13 23:20:25] 2026-01-14 04:19:37,729 | INFO     | [data] control thread has finished
[2026-01-13 23:20:25] 2026-01-14 04:19:37,784 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 23:20:25] 2026-01-14 04:19:37,846 | INFO     | [data] copytool_in thread has finished
[2026-01-13 23:20:25] 2026-01-14 04:19:38,116 | INFO     | [payload] failed_post thread has finished
[2026-01-13 23:20:25] 2026-01-14 04:19:38,227 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 23:20:25] 2026-01-14 04:19:38,271 | INFO     | [job] control thread has finished
[2026-01-13 23:20:25] 2026-01-14 04:19:38,525 | INFO     | [job] validate thread has finished
[2026-01-13 23:20:25] 2026-01-14 04:19:38,634 | INFO     | [data] copytool_out thread has finished
[2026-01-13 23:20:25] 2026-01-14 04:19:38,687 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 23:20:25] 2026-01-14 04:19:38,828 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 23:20:25] 2026-01-14 04:19:41,680 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 23:20:25] 2026-01-14 04:20:06,616 | INFO     | PID=9426 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-13 23:20:25] 2026-01-14 04:20:06,624 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 23:20:25] 2026-01-14 04:20:06,624 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 23:20:25] 2026-01-14 04:20:06,624 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 23:20:25] 2026-01-14 04:20:18,451 | INFO     | [monitor] cgroup control has ended
[2026-01-13 23:20:25] 2026-01-14 04:20:20,058 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140495433799488)>', '<ExcThread(monitor, started 140494520694528)>']
[2026-01-13 23:20:25] 2026-01-14 04:20:20,680 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 23:20:25] 2026-01-14 04:20:20,680 | INFO     | [monitor] control thread has ended
[2026-01-13 23:20:25] 2026-01-14 04:20:25,068 | INFO     | all workflow threads have been joined
[2026-01-13 23:20:25] 2026-01-14 04:20:25,068 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 23:20:25] 2026-01-14 04:20:25,068 | INFO     | traces error code: 0
[2026-01-13 23:20:25] 2026-01-14 04:20:25,068 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 23:20:25] 2026-01-14 04:20:25,160 [wrapper] ==== pilot stdout END ====
[2026-01-13 23:20:25] 2026-01-14 04:20:25,164 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 23:20:25] 2026-01-14 04:20:25,168 [wrapper] pilotpid: 9426
[2026-01-13 23:20:25] 2026-01-14 04:20:25,172 [wrapper] Pilot exit status: 0
[2026-01-13 23:20:25] 2026-01-14 04:20:25,188 [wrapper] pandaids: 6969274300
[2026-01-13 23:20:25] 2026-01-14 04:20:25,233 [wrapper] cleanup supervisor_pilot  7917 9427
[2026-01-13 23:20:25] 2026-01-14 04:20:25,237 [wrapper] Test setup, not cleaning
[2026-01-13 23:20:25] 2026-01-14 04:20:25,240 [wrapper] apfmon messages muted
[2026-01-13 23:20:25] 2026-01-14 04:20:25,244 [wrapper] ==== wrapper stdout END ====
[2026-01-13 23:20:25] 2026-01-14 04:20:25,248 [wrapper] ==== wrapper stderr END ====
[2026-01-13 23:20:25]  *** Error codes and diagnostics ***
[2026-01-13 23:20:25]     "exeErrorCode": 0,
[2026-01-13 23:20:25]     "exeErrorDiag": "",
[2026-01-13 23:20:25]     "pilotErrorCode": 0,
[2026-01-13 23:20:25]     "pilotErrorDiag": "",
[2026-01-13 23:20:25]  *** Listing of results directory ***
[2026-01-13 23:20:25] total 728764
[2026-01-13 23:20:25] -rw-r--r-- 1 boincer umatlas    579449 Jan 13 18:46 pilot3.tar.gz
[2026-01-13 23:20:25] -rwx------ 1 boincer umatlas     36322 Jan 13 18:50 runpilot2-wrapper.sh
[2026-01-13 23:20:25] -rw-r--r-- 1 boincer umatlas      5112 Jan 13 18:57 queuedata.json
[2026-01-13 23:20:25] -rw-r--r-- 1 boincer umatlas       100 Jan 13 22:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 23:20:25] -rwxr-xr-x 1 boincer umatlas      7986 Jan 13 22:30 run_atlas
[2026-01-13 23:20:25] -rw-r--r-- 1 boincer umatlas       105 Jan 13 22:30 job.xml
[2026-01-13 23:20:25] -rw-r--r-- 2 boincer umatlas 586579054 Jan 13 22:30 EVNT.32794306._000335.pool.root.1
[2026-01-13 23:20:25] -rw-r--r-- 2 boincer umatlas     15847 Jan 13 22:30 start_atlas.sh
[2026-01-13 23:20:25] drwxrwx--x 2 boincer umatlas      4096 Jan 13 22:30 shared
[2026-01-13 23:20:25] -rw-r--r-- 2 boincer umatlas    592393 Jan 13 22:30 input.tar.gz
[2026-01-13 23:20:25] -rw-r--r-- 1 boincer umatlas         0 Jan 13 22:30 boinc_lockfile
[2026-01-13 23:20:25] -rw-r--r-- 1 boincer umatlas      2505 Jan 13 22:30 pandaJob.out
[2026-01-13 23:20:25] -rw------- 1 boincer umatlas        57 Jan 13 22:31 setup.sh.local
[2026-01-13 23:20:25] -rw------- 1 boincer umatlas    997226 Jan 13 22:31 agis_schedconf.cvmfs.json
[2026-01-13 23:20:25] -rw------- 1 boincer umatlas   1516246 Jan 13 22:31 agis_ddmendpoints.agis.ALL.json
[2026-01-13 23:20:25] drwx------ 5 boincer umatlas      4096 Jan 13 22:31 pilot3
[2026-01-13 23:20:25] -rw-r--r-- 1 boincer umatlas      5953 Jan 13 23:18 init_data.xml
[2026-01-13 23:20:25] -rw------- 1 boincer umatlas 154162030 Jan 13 23:18 HITS.48215263._008360.pool.root.1
[2026-01-13 23:20:25] -rw------- 1 boincer umatlas      1043 Jan 13 23:19 memory_monitor_summary.json
[2026-01-13 23:20:25] -rw-r--r-- 1 boincer umatlas       530 Jan 13 23:19 boinc_task_state.xml
[2026-01-13 23:20:25] -rw------- 1 boincer umatlas    354203 Jan 13 23:19 log.48215263._008360.job.log.tgz.1
[2026-01-13 23:20:25] -rw------- 1 boincer umatlas      7836 Jan 13 23:19 heartbeat.json
[2026-01-13 23:20:25] -rw------- 1 boincer umatlas        95 Jan 13 23:20 pilot_heartbeat.json
[2026-01-13 23:20:25] -rw-r--r-- 1 boincer umatlas      8192 Jan 13 23:20 boinc_mmap_file
[2026-01-13 23:20:25] -rw-r--r-- 1 boincer umatlas        27 Jan 13 23:20 wrapper_checkpoint.txt
[2026-01-13 23:20:25] -rw------- 1 boincer umatlas      4931 Jan 13 23:20 pilotlog.txt
[2026-01-13 23:20:25] -rw------- 1 boincer umatlas    440308 Jan 13 23:20 log.48215263._008360.job.log.1
[2026-01-13 23:20:25] -rw------- 1 boincer umatlas       357 Jan 13 23:20 output.list
[2026-01-13 23:20:25] -rw-r--r-- 1 boincer umatlas       620 Jan 13 23:20 runtime_log
[2026-01-13 23:20:25] -rw------- 1 boincer umatlas    808960 Jan 13 23:20 result.tar.gz
[2026-01-13 23:20:25] -rw-r--r-- 1 boincer umatlas      9344 Jan 13 23:20 runtime_log.err
[2026-01-13 23:20:25] -rw------- 1 boincer umatlas       659 Jan 13 23:20 C7aMDmsK3z8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmxVpKDmZHd8Fo.diag
[2026-01-13 23:20:25] -rw-r--r-- 1 boincer umatlas     22432 Jan 13 23:20 stderr.txt
[2026-01-13 23:20:25] HITS file was successfully produced:
[2026-01-13 23:20:25] -rw------- 1 boincer umatlas 154162030 Jan 13 23:18 shared/HITS.pool.root.1
[2026-01-13 23:20:25]  *** Contents of shared directory: ***
[2026-01-13 23:20:25] total 724780
[2026-01-13 23:20:25] -rw-r--r-- 2 boincer umatlas 586579054 Jan 13 22:30 ATLAS.root_0
[2026-01-13 23:20:25] -rw-r--r-- 2 boincer umatlas     15847 Jan 13 22:30 start_atlas.sh
[2026-01-13 23:20:25] -rw-r--r-- 2 boincer umatlas    592393 Jan 13 22:30 input.tar.gz
[2026-01-13 23:20:25] -rw------- 1 boincer umatlas 154162030 Jan 13 23:18 HITS.pool.root.1
[2026-01-13 23:20:25] -rw------- 1 boincer umatlas    808960 Jan 13 23:20 result.tar.gz
23:20:26 (5641): run_atlas exited; CPU time 30260.085287
23:20:26 (5641): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN