Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:07:22 (4070533): wrapper (7.7.26015): starting
05:07:22 (4070533): wrapper: running run_atlas (--nthreads 3)
[2026-01-14 05:07:22] Arguments: --nthreads 3
[2026-01-14 05:07:22] Threads: 3
[2026-01-14 05:07:22] Checking for CVMFS
[2026-01-14 05:07:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 05:07:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 05:07:22] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 05:07:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 05:07:22] 2.9.2.0 3982237 215 60412 155116 0 62 36092936 36864000 0 130560 0 240894 99.991 8323 23780 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-14 05:07:22] CVMFS is ok
[2026-01-14 05:07:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 05:07:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 05:07:22] Further information can be found at the LHC@home message board.
[2026-01-14 05:07:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 05:07:22] Checking for apptainer binary...
[2026-01-14 05:07:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 05:07:22] Running /usr/bin/apptainer --version
[2026-01-14 05:07:22] apptainer version 1.4.1-1.1
[2026-01-14 05:07:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 05:07:22] thA331b
[2026-01-14 05:07:22] apptainer works
[2026-01-14 05:07:22] Set ATHENA_PROC_NUMBER=3
[2026-01-14 05:07:22] Set ATHENA_CORE_NUMBER=3
[2026-01-14 05:07:22] Starting ATLAS job with PandaID=6969274091
[2026-01-14 05:07:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 06:00:39]  *** The last 200 lines of the pilot log: ***
[2026-01-14 06:00:39] 2026-01-14 05:00:08,030 | INFO     | process IDs to be killed: [4080701] (in reverse order)
[2026-01-14 06:00:39] 2026-01-14 05:00:08,054 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 06:00:39] 2026-01-14 05:00:08,054 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 06:00:39] 2026-01-14 05:00:08,055 | INFO     | did not find any defunct processes belonging to 4080701
[2026-01-14 06:00:39] 2026-01-14 05:00:08,056 | INFO     | did not find any defunct processes belonging to 4080701
[2026-01-14 06:00:39] 2026-01-14 05:00:08,057 | INFO     | ready for new job
[2026-01-14 06:00:39] 2026-01-14 05:00:08,057 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 06:00:39] 2026-01-14 05:00:08,057 | INFO     | ***************************************
[2026-01-14 06:00:39] 2026-01-14 05:00:08,057 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 06:00:39] 2026-01-14 05:00:08,057 | INFO     | ***************************************
[2026-01-14 06:00:39] 2026-01-14 05:00:08,057 | INFO     | 
[2026-01-14 06:00:39] 2026-01-14 05:00:08,058 | INFO     | architecture information:
[2026-01-14 06:00:39] 2026-01-14 05:00:08,058 | INFO     | executing command: cat /etc/os-release
[2026-01-14 06:00:39] 2026-01-14 05:00:08,066 | INFO     | cat /etc/os-release:
[2026-01-14 06:00:39] NAME="CentOS Linux"
[2026-01-14 06:00:39] VERSION="7 (Core)"
[2026-01-14 06:00:39] ID="centos"
[2026-01-14 06:00:39] ID_LIKE="rhel fedora"
[2026-01-14 06:00:39] VERSION_ID="7"
[2026-01-14 06:00:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 06:00:39] ANSI_COLOR="0;31"
[2026-01-14 06:00:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 06:00:39] HOME_URL="https://www.centos.org/"
[2026-01-14 06:00:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 06:00:39] 
[2026-01-14 06:00:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 06:00:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 06:00:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 06:00:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 06:00:39] 
[2026-01-14 06:00:39] 2026-01-14 05:00:08,066 | INFO     | ***************************************
[2026-01-14 06:00:39] 2026-01-14 05:00:08,569 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-14 06:00:39] 2026-01-14 05:00:08,582 | INFO     | sufficient remaining disk space (223081398272 B)
[2026-01-14 06:00:39] 2026-01-14 05:00:08,582 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 06:00:39] 2026-01-14 05:00:08,583 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 06:00:39] 2026-01-14 05:00:08,583 | INFO     | update_server=False
[2026-01-14 06:00:39] 2026-01-14 05:00:08,583 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 06:00:39] 2026-01-14 05:00:08,583 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 06:00:39] 2026-01-14 05:00:08,583 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 06:00:39] 2026-01-14 05:00:08,670 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 06:00:39] 2026-01-14 05:00:09,320 | INFO     | all data control threads have been joined
[2026-01-14 06:00:39] 2026-01-14 05:00:09,406 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 06:00:39] 2026-01-14 05:00:09,406 | INFO     | aborting loop
[2026-01-14 06:00:39] 2026-01-14 05:00:09,425 | INFO     | all payload control threads have been joined
[2026-01-14 06:00:39] 2026-01-14 05:00:09,588 | INFO     | [job] retrieve thread has finished
[2026-01-14 06:00:39] 2026-01-14 05:00:09,589 | INFO     | [job] queue monitor thread has finished
[2026-01-14 06:00:39] 2026-01-14 05:00:09,699 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 06:00:39] 2026-01-14 05:00:09,778 | INFO     | [payload] failed_post thread has finished
[2026-01-14 06:00:39] 2026-01-14 05:00:09,973 | INFO     | [data] copytool_in thread has finished
[2026-01-14 06:00:39] 2026-01-14 05:00:10,216 | INFO     | all job control threads have been joined
[2026-01-14 06:00:39] 2026-01-14 05:00:10,311 | INFO     | [payload] validate_post thread has finished
[2026-01-14 06:00:39] 2026-01-14 05:00:10,326 | INFO     | [data] control thread has finished
[2026-01-14 06:00:39] 2026-01-14 05:00:10,412 | INFO     | [job] job monitor thread has finished
[2026-01-14 06:00:39] 2026-01-14 05:00:10,431 | INFO     | [payload] control thread has finished
[2026-01-14 06:00:39] 2026-01-14 05:00:10,509 | INFO     | [job] validate thread has finished
[2026-01-14 06:00:39] 2026-01-14 05:00:10,589 | INFO     | [data] copytool_out thread has finished
[2026-01-14 06:00:39] 2026-01-14 05:00:10,594 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 06:00:39] 2026-01-14 05:00:10,637 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 06:00:39] 2026-01-14 05:00:11,222 | INFO     | [job] control thread has finished
[2026-01-14 06:00:39] 2026-01-14 05:00:12,676 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 06:00:39] 2026-01-14 05:00:19,190 | INFO     | job.realtimelogging is not enabled
[2026-01-14 06:00:39] 2026-01-14 05:00:20,196 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 06:00:39] 2026-01-14 05:00:31,202 | INFO     | [monitor] cgroup control has ended
[2026-01-14 06:00:39] 2026-01-14 05:00:31,677 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139868777305920)>', '<ExcThread(monitor, started 139868151736064)>']
[2026-01-14 06:00:39] 2026-01-14 05:00:36,690 | INFO     | all workflow threads have been joined
[2026-01-14 06:00:39] 2026-01-14 05:00:36,691 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 06:00:39] 2026-01-14 05:00:36,692 | INFO     | traces error code: 0
[2026-01-14 06:00:39] 2026-01-14 05:00:36,692 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 06:00:39] 2026-01-14 05:00:38,925 | INFO     | PID=4074255 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-14 06:00:39] 2026-01-14 05:00:38,925 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 06:00:39] 2026-01-14 05:00:38,925 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 06:00:39] 2026-01-14 05:00:38,925 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 06:00:39] 2026-01-14 05:00:38,925 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 06:00:39] 2026-01-14 05:00:38,925 | INFO     | [monitor] control thread has ended
[2026-01-14 06:00:39] 2026-01-14 05:00:38,971 [wrapper] ==== pilot stdout END ====
[2026-01-14 06:00:39] 2026-01-14 05:00:38,974 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 06:00:39] 2026-01-14 05:00:38,976 [wrapper] pilotpid: 4074255
[2026-01-14 06:00:39] 2026-01-14 05:00:38,978 [wrapper] Pilot exit status: 0
[2026-01-14 06:00:39] 2026-01-14 05:00:38,985 [wrapper] pandaids: 6969274091
[2026-01-14 06:00:39] 2026-01-14 05:00:39,001 [wrapper] cleanup supervisor_pilot 4089886 4074256
[2026-01-14 06:00:39] 2026-01-14 05:00:39,003 [wrapper] Test setup, not cleaning
[2026-01-14 06:00:39] 2026-01-14 05:00:39,005 [wrapper] apfmon messages muted
[2026-01-14 06:00:39] 2026-01-14 05:00:39,007 [wrapper] ==== wrapper stdout END ====
[2026-01-14 06:00:39] 2026-01-14 05:00:39,010 [wrapper] ==== wrapper stderr END ====
[2026-01-14 06:00:39]  *** Error codes and diagnostics ***
[2026-01-14 06:00:39]     "exeErrorCode": 0,
[2026-01-14 06:00:39]     "exeErrorDiag": "",
[2026-01-14 06:00:39]     "pilotErrorCode": 0,
[2026-01-14 06:00:39]     "pilotErrorDiag": "",
[2026-01-14 06:00:39]  *** Listing of results directory ***
[2026-01-14 06:00:39] total 739188
[2026-01-14 06:00:39] -rw-r--r-- 1 boinc boinc    579449 Jan 14 00:46 pilot3.tar.gz
[2026-01-14 06:00:39] -rwx------ 1 boinc boinc     36322 Jan 14 00:50 runpilot2-wrapper.sh
[2026-01-14 06:00:39] -rw-r--r-- 1 boinc boinc      5112 Jan 14 00:54 queuedata.json
[2026-01-14 06:00:39] -rw-r--r-- 1 boinc boinc       100 Jan 14 05:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 06:00:39] -rwxr-xr-x 1 boinc boinc      7986 Jan 14 05:07 run_atlas
[2026-01-14 06:00:39] -rw-r--r-- 1 boinc boinc       105 Jan 14 05:07 job.xml
[2026-01-14 06:00:39] -rw-r--r-- 2 boinc boinc 601538167 Jan 14 05:07 EVNT.32794306._000333.pool.root.1
[2026-01-14 06:00:39] drwxrwx--x 2 boinc boinc      4096 Jan 14 05:07 shared
[2026-01-14 06:00:39] -rw-r--r-- 2 boinc boinc    592396 Jan 14 05:07 input.tar.gz
[2026-01-14 06:00:39] -rw-r--r-- 2 boinc boinc     15847 Jan 14 05:07 start_atlas.sh
[2026-01-14 06:00:39] -rw-r--r-- 1 boinc boinc         0 Jan 14 05:07 boinc_setup_complete
[2026-01-14 06:00:39] -rw-r--r-- 1 boinc boinc      6441 Jan 14 05:07 init_data.xml
[2026-01-14 06:00:39] -rw-r--r-- 1 boinc boinc         0 Jan 14 05:07 boinc_lockfile
[2026-01-14 06:00:39] -rw-r--r-- 1 boinc boinc      2505 Jan 14 05:07 pandaJob.out
[2026-01-14 06:00:39] -rw------- 1 boinc boinc    997226 Jan 14 05:07 agis_schedconf.cvmfs.json
[2026-01-14 06:00:39] -rw------- 1 boinc boinc   1516246 Jan 14 05:07 agis_ddmendpoints.agis.ALL.json
[2026-01-14 06:00:39] drwx------ 5 boinc boinc      4096 Jan 14 05:07 pilot3
[2026-01-14 06:00:39] -rw------- 1 boinc boinc        95 Jan 14 05:59 pilot_heartbeat.json
[2026-01-14 06:00:39] -rw------- 1 boinc boinc 150029036 Jan 14 05:59 HITS.48215263._008323.pool.root.1
[2026-01-14 06:00:39] -rw-r--r-- 1 boinc boinc       529 Jan 14 05:59 boinc_task_state.xml
[2026-01-14 06:00:39] -rw------- 1 boinc boinc      1013 Jan 14 05:59 memory_monitor_summary.json
[2026-01-14 06:00:39] -rw------- 1 boinc boinc    241395 Jan 14 06:00 log.48215263._008323.job.log.tgz.1
[2026-01-14 06:00:39] -rw------- 1 boinc boinc      7758 Jan 14 06:00 heartbeat.json
[2026-01-14 06:00:39] -rw-r--r-- 1 boinc boinc        26 Jan 14 06:00 wrapper_checkpoint.txt
[2026-01-14 06:00:39] -rw-r--r-- 1 boinc boinc      8192 Jan 14 06:00 boinc_mmap_file
[2026-01-14 06:00:39] -rw------- 1 boinc boinc       747 Jan 14 06:00 pilotlog.txt
[2026-01-14 06:00:39] -rw------- 1 boinc boinc    483548 Jan 14 06:00 log.48215263._008323.job.log.1
[2026-01-14 06:00:39] -rw------- 1 boinc boinc       357 Jan 14 06:00 output.list
[2026-01-14 06:00:39] -rw-r--r-- 1 boinc boinc       620 Jan 14 06:00 runtime_log
[2026-01-14 06:00:39] -rw------- 1 boinc boinc    747520 Jan 14 06:00 result.tar.gz
[2026-01-14 06:00:39] -rw-r--r-- 1 boinc boinc      8902 Jan 14 06:00 runtime_log.err
[2026-01-14 06:00:39] -rw------- 1 boinc boinc       657 Jan 14 06:00 AD1LDmsK3z8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmZVpKDmwXZecn.diag
[2026-01-14 06:00:39] -rw-r--r-- 1 boinc boinc     10176 Jan 14 06:00 stderr.txt
[2026-01-14 06:00:39] HITS file was successfully produced:
[2026-01-14 06:00:39] -rw------- 1 boinc boinc 150029036 Jan 14 05:59 shared/HITS.pool.root.1
[2026-01-14 06:00:39]  *** Contents of shared directory: ***
[2026-01-14 06:00:39] total 735292
[2026-01-14 06:00:39] -rw-r--r-- 2 boinc boinc 601538167 Jan 14 05:07 ATLAS.root_0
[2026-01-14 06:00:39] -rw-r--r-- 2 boinc boinc    592396 Jan 14 05:07 input.tar.gz
[2026-01-14 06:00:39] -rw-r--r-- 2 boinc boinc     15847 Jan 14 05:07 start_atlas.sh
[2026-01-14 06:00:39] -rw------- 1 boinc boinc 150029036 Jan 14 05:59 HITS.pool.root.1
[2026-01-14 06:00:39] -rw------- 1 boinc boinc    747520 Jan 14 06:00 result.tar.gz
06:00:40 (4070533): run_atlas exited; CPU time 8781.492841
06:00:40 (4070533): called boinc_finish(0)

</stderr_txt>
]]>

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