Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:24:26 (585562): wrapper (7.7.26015): starting
05:24:26 (585562): wrapper: running run_atlas (--nthreads 4)
[2026-01-14 05:24:26] Arguments: --nthreads 4
[2026-01-14 05:24:26] Threads: 4
[2026-01-14 05:24:26] Checking for CVMFS
[2026-01-14 05:24:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 05:24:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 05:24:27] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 05:24:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 05:24:27] 2.9.2.0 426885 339 71936 155118 1 57 18722356 36864001 0 130560 0 421042 99.992 16471 21815 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-14 05:24:27] CVMFS is ok
[2026-01-14 05:24:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 05:24:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 05:24:27] Further information can be found at the LHC@home message board.
[2026-01-14 05:24:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 05:24:27] Checking for apptainer binary...
[2026-01-14 05:24:27] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 05:24:27] Running /usr/bin/apptainer --version
[2026-01-14 05:24:27] apptainer version 1.4.1-1.1
[2026-01-14 05:24:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 05:24:27] iaxoA393
[2026-01-14 05:24:27] apptainer works
[2026-01-14 05:24:27] Set ATHENA_PROC_NUMBER=4
[2026-01-14 05:24:27] Set ATHENA_CORE_NUMBER=4
[2026-01-14 05:24:27] Starting ATLAS job with PandaID=6961933900
[2026-01-14 05:24:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 07:05:47]  *** The last 200 lines of the pilot log: ***
[2026-01-14 07:05:47] 2026-01-14 06:04:46,115 | INFO     | update_server=False
[2026-01-14 07:05:47] 2026-01-14 06:04:46,115 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 07:05:47] 2026-01-14 06:04:46,115 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 07:05:47] 2026-01-14 06:04:46,115 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 07:05:47] 2026-01-14 06:04:46,115 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-14 07:05:47] 2026-01-14 06:04:46,116 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 07:05:47] 2026-01-14 06:04:46,116 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 07:05:47] 2026-01-14 06:04:46,116 | INFO     | aborting loop
[2026-01-14 07:05:47] 2026-01-14 06:04:46,116 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 07:05:47] 2026-01-14 06:04:46,116 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 07:05:47] 2026-01-14 06:04:46,898 | INFO     | all data control threads have been joined
[2026-01-14 07:05:47] 2026-01-14 06:04:46,925 | INFO     | all payload control threads have been joined
[2026-01-14 07:05:47] 2026-01-14 06:04:47,116 | INFO     | [job] retrieve thread has finished
[2026-01-14 07:05:47] 2026-01-14 06:04:47,121 | INFO     | [job] queue monitor thread has finished
[2026-01-14 07:05:47] 2026-01-14 06:04:47,122 | INFO     | [job] job monitor thread has finished
[2026-01-14 07:05:47] 2026-01-14 06:04:47,186 | INFO     | all job control threads have been joined
[2026-01-14 07:05:47] 2026-01-14 06:04:47,425 | INFO     | [payload] failed_post thread has finished
[2026-01-14 07:05:47] 2026-01-14 06:04:47,562 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 07:05:47] 2026-01-14 06:04:47,703 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 07:05:47] 2026-01-14 06:04:47,903 | INFO     | [data] control thread has finished
[2026-01-14 07:05:47] 2026-01-14 06:04:47,931 | INFO     | [payload] control thread has finished
[2026-01-14 07:05:47] 2026-01-14 06:04:47,943 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 07:05:47] 2026-01-14 06:04:48,120 | INFO     | [job] validate thread has finished
[2026-01-14 07:05:47] 2026-01-14 06:04:48,121 | INFO     | [data] copytool_out thread has finished
[2026-01-14 07:05:47] 2026-01-14 06:04:48,192 | INFO     | [job] control thread has finished
[2026-01-14 07:05:47] 2026-01-14 06:04:48,444 | INFO     | [payload] validate_post thread has finished
[2026-01-14 07:05:47] 2026-01-14 06:04:48,590 | INFO     | [data] copytool_in thread has finished
[2026-01-14 07:05:47] 2026-01-14 06:04:49,597 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 07:05:47] 2026-01-14 06:04:53,605 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 07:05:47] 2026-01-14 06:04:56,426 | INFO     | job.realtimelogging is not enabled
[2026-01-14 07:05:47] 2026-01-14 06:04:57,432 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 07:05:47] 2026-01-14 06:05:41,919 | INFO     | [monitor] cgroup control has ended
[2026-01-14 07:05:47] 2026-01-14 06:05:42,280 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140311967643456)>', '<ExcThread(monitor, started 140311170885376)>']
[2026-01-14 07:05:47] 2026-01-14 06:05:42,414 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 07:05:47] 2026-01-14 06:05:42,414 | INFO     | [monitor] control thread has ended
[2026-01-14 07:05:47] 2026-01-14 06:05:47,305 | INFO     | all workflow threads have been joined
[2026-01-14 07:05:47] 2026-01-14 06:05:47,306 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 07:05:47] 2026-01-14 06:05:47,307 | INFO     | traces error code: 0
[2026-01-14 07:05:47] 2026-01-14 06:05:47,307 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 07:05:47] 2026-01-14 06:05:47,375 [wrapper] ==== pilot stdout END ====
[2026-01-14 07:05:47] 2026-01-14 06:05:47,378 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 07:05:47] 2026-01-14 06:05:47,382 [wrapper] pilotpid: 589370
[2026-01-14 07:05:47] 2026-01-14 06:05:47,386 [wrapper] Pilot exit status: 0
[2026-01-14 07:05:47] 2026-01-14 06:05:47,397 [wrapper] pandaids: 6961933900
[2026-01-14 07:05:47] 2026-01-14 06:05:47,418 [wrapper] cleanup supervisor_pilot  608048 589371
[2026-01-14 07:05:47] 2026-01-14 06:05:47,422 [wrapper] Test setup, not cleaning
[2026-01-14 07:05:47] 2026-01-14 06:05:47,425 [wrapper] apfmon messages muted
[2026-01-14 07:05:47] 2026-01-14 06:05:47,429 [wrapper] ==== wrapper stdout END ====
[2026-01-14 07:05:47] 2026-01-14 06:05:47,432 [wrapper] ==== wrapper stderr END ====
[2026-01-14 07:05:47]  *** Error codes and diagnostics ***
[2026-01-14 07:05:47]     "exeErrorCode": 0,
[2026-01-14 07:05:47]     "exeErrorDiag": "",
[2026-01-14 07:05:47]     "pilotErrorCode": 0,
[2026-01-14 07:05:47]     "pilotErrorDiag": "",
[2026-01-14 07:05:47]  *** Listing of results directory ***
[2026-01-14 07:05:47] total 443740
[2026-01-14 07:05:47] -rw-r--r-- 1 boinc boinc    579449 Jan  7 14:00 pilot3.tar.gz
[2026-01-14 07:05:47] -rwx------ 1 boinc boinc     36322 Jan  7 14:04 runpilot2-wrapper.sh
[2026-01-14 07:05:47] -rw-r--r-- 1 boinc boinc      5112 Jan  7 14:05 queuedata.json
[2026-01-14 07:05:47] -rw-r--r-- 1 boinc boinc       100 Jan 14 05:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 07:05:47] -rwxr-xr-x 1 boinc boinc      7986 Jan 14 05:24 run_atlas
[2026-01-14 07:05:47] -rw-r--r-- 1 boinc boinc       105 Jan 14 05:24 job.xml
[2026-01-14 07:05:47] -rw-r--r-- 2 boinc boinc 224138095 Jan 14 05:24 EVNT.47898824._000122.pool.root.1
[2026-01-14 07:05:47] drwxrwx--x 2 boinc boinc      4096 Jan 14 05:24 shared
[2026-01-14 07:05:47] -rw-r--r-- 2 boinc boinc    592406 Jan 14 05:24 input.tar.gz
[2026-01-14 07:05:47] -rw-r--r-- 2 boinc boinc     15847 Jan 14 05:24 start_atlas.sh
[2026-01-14 07:05:47] -rw-r--r-- 1 boinc boinc         0 Jan 14 05:24 boinc_setup_complete
[2026-01-14 07:05:47] -rw-r--r-- 1 boinc boinc      6371 Jan 14 05:24 init_data.xml
[2026-01-14 07:05:47] -rw-r--r-- 1 boinc boinc         0 Jan 14 05:24 boinc_lockfile
[2026-01-14 07:05:47] -rw-r--r-- 1 boinc boinc      2515 Jan 14 05:24 pandaJob.out
[2026-01-14 07:05:47] -rw------- 1 boinc boinc    997226 Jan 14 05:24 agis_schedconf.cvmfs.json
[2026-01-14 07:05:47] -rw------- 1 boinc boinc   1516246 Jan 14 05:24 agis_ddmendpoints.agis.ALL.json
[2026-01-14 07:05:47] drwx------ 5 boinc boinc      4096 Jan 14 05:24 pilot3
[2026-01-14 07:05:47] -rw------- 1 boinc boinc        95 Jan 14 07:04 pilot_heartbeat.json
[2026-01-14 07:05:47] -rw-r--r-- 1 boinc boinc       530 Jan 14 07:04 boinc_task_state.xml
[2026-01-14 07:05:47] -rw------- 1 boinc boinc 224044487 Jan 14 07:04 HITS.47898826._007428.pool.root.1
[2026-01-14 07:05:47] -rw------- 1 boinc boinc      1023 Jan 14 07:04 memory_monitor_summary.json
[2026-01-14 07:05:47] -rw------- 1 boinc boinc    280444 Jan 14 07:04 log.47898826._007428.job.log.tgz.1
[2026-01-14 07:05:47] -rw------- 1 boinc boinc      7768 Jan 14 07:04 heartbeat.json
[2026-01-14 07:05:47] -rw-r--r-- 1 boinc boinc        27 Jan 14 07:05 wrapper_checkpoint.txt
[2026-01-14 07:05:47] -rw-r--r-- 1 boinc boinc      8192 Jan 14 07:05 boinc_mmap_file
[2026-01-14 07:05:47] -rw------- 1 boinc boinc      4628 Jan 14 07:05 pilotlog.txt
[2026-01-14 07:05:47] -rw------- 1 boinc boinc    871181 Jan 14 07:05 log.47898826._007428.job.log.1
[2026-01-14 07:05:47] -rw------- 1 boinc boinc       357 Jan 14 07:05 output.list
[2026-01-14 07:05:47] -rw-r--r-- 1 boinc boinc       620 Jan 14 07:05 runtime_log
[2026-01-14 07:05:47] -rw------- 1 boinc boinc   1167360 Jan 14 07:05 result.tar.gz
[2026-01-14 07:05:47] -rw-r--r-- 1 boinc boinc      8907 Jan 14 07:05 runtime_log.err
[2026-01-14 07:05:47] -rw------- 1 boinc boinc       661 Jan 14 07:05 AkjMDmZOix8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmW0hKDm6zwQun.diag
[2026-01-14 07:05:47] -rw-r--r-- 1 boinc boinc      7426 Jan 14 07:05 stderr.txt
[2026-01-14 07:05:47] HITS file was successfully produced:
[2026-01-14 07:05:47] -rw------- 1 boinc boinc 224044487 Jan 14 07:04 shared/HITS.pool.root.1
[2026-01-14 07:05:47]  *** Contents of shared directory: ***
[2026-01-14 07:05:47] total 439428
[2026-01-14 07:05:47] -rw-r--r-- 2 boinc boinc 224138095 Jan 14 05:24 ATLAS.root_0
[2026-01-14 07:05:47] -rw-r--r-- 2 boinc boinc    592406 Jan 14 05:24 input.tar.gz
[2026-01-14 07:05:47] -rw-r--r-- 2 boinc boinc     15847 Jan 14 05:24 start_atlas.sh
[2026-01-14 07:05:47] -rw------- 1 boinc boinc 224044487 Jan 14 07:04 HITS.pool.root.1
[2026-01-14 07:05:47] -rw------- 1 boinc boinc   1167360 Jan 14 07:05 result.tar.gz
07:05:49 (585562): run_atlas exited; CPU time 22956.094362
07:05:49 (585562): called boinc_finish(0)

</stderr_txt>
]]>

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