Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:46:19 (31904): wrapper (7.7.26015): starting
06:46:19 (31904): wrapper: running run_atlas (--nthreads 8)
[2026-01-14 06:46:19] Arguments: --nthreads 8
[2026-01-14 06:46:19] Threads: 8
[2026-01-14 06:46:19] Checking for CVMFS
[2026-01-14 06:46:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 06:46:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 06:46:21] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 06:46:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 06:46:22] 2.11.2.0 26786 42212 103132 155120 2 60 21211949 25165825 96 130560 0 16366859 99.831 10301389 3124 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-14 06:46:22] CVMFS is ok
[2026-01-14 06:46:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 06:46:23] Checking for apptainer binary...
[2026-01-14 06:46:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 06:46:23] Running /usr/bin/apptainer --version
[2026-01-14 06:46:23] apptainer version 1.3.2-1.el7
[2026-01-14 06:46:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 06:46:51] cg-vwn410.simple-grid.lan
[2026-01-14 06:46:51] apptainer works
[2026-01-14 06:46:51] Set ATHENA_PROC_NUMBER=8
[2026-01-14 06:46:51] Set ATHENA_CORE_NUMBER=8
[2026-01-14 06:46:51] Starting ATLAS job with PandaID=6969274986
[2026-01-14 06:46:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 09:55:49]  *** The last 200 lines of the pilot log: ***
[2026-01-14 09:55:49] 2026-01-14 08:55:07,879 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 09:55:49] 2026-01-14 08:55:07,879 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 09:55:49] 2026-01-14 08:55:07,879 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 09:55:49] 2026-01-14 08:55:07,879 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 09:55:49] 2026-01-14 08:55:07,889 | INFO     | fitting pss+swap vs Time
[2026-01-14 09:55:49] 2026-01-14 08:55:07,890 | INFO     | sum of square deviations: 1550429070.0
[2026-01-14 09:55:49] 2026-01-14 08:55:07,891 | INFO     | sum of deviations: 68882754463.00002
[2026-01-14 09:55:49] 2026-01-14 08:55:07,892 | INFO     | mean x: 1768375601.0
[2026-01-14 09:55:49] 2026-01-14 08:55:07,892 | INFO     | mean y: 2407320.596491228
[2026-01-14 09:55:49] 2026-01-14 08:55:07,892 | INFO     | intersect: -78563316632.22069
[2026-01-14 09:55:49] 2026-01-14 08:55:07,892 | INFO     | chi2: 8.184233177245032
[2026-01-14 09:55:49] 2026-01-14 08:55:07,893 | INFO     | sum of square deviations: 1418361477.5
[2026-01-14 09:55:49] 2026-01-14 08:55:07,894 | INFO     | sum of deviations: 89850145017.00002
[2026-01-14 09:55:49] 2026-01-14 08:55:07,894 | INFO     | mean x: 1768375448.5
[2026-01-14 09:55:49] 2026-01-14 08:55:07,894 | INFO     | mean y: 2431051.2289156625
[2026-01-14 09:55:49] 2026-01-14 08:55:07,894 | INFO     | intersect: -112020345238.69429
[2026-01-14 09:55:49] 2026-01-14 08:55:07,895 | INFO     | chi2: 6.653552819747634
[2026-01-14 09:55:49] 2026-01-14 08:55:07,895 | INFO     | current chi2=6.653552819747634 (change=18.702795049305454 %)
[2026-01-14 09:55:49] 2026-01-14 08:55:07,895 | INFO     | right removable region: 165
[2026-01-14 09:55:49] 2026-01-14 08:55:07,895 | INFO     | sum of square deviations: 1418361477.5
[2026-01-14 09:55:49] 2026-01-14 08:55:07,897 | INFO     | sum of deviations: 9792116530.5
[2026-01-14 09:55:49] 2026-01-14 08:55:07,897 | INFO     | mean x: 1768375753.5
[2026-01-14 09:55:49] 2026-01-14 08:55:07,897 | INFO     | mean y: 2475500.3674698793
[2026-01-14 09:55:49] 2026-01-14 08:55:07,897 | INFO     | intersect: -12206077624.259212
[2026-01-14 09:55:49] 2026-01-14 08:55:07,897 | INFO     | chi2: 3.191132482754769
[2026-01-14 09:55:49] 2026-01-14 08:55:07,897 | INFO     | current chi2=3.191132482754769 (change=61.00877854229265 %)
[2026-01-14 09:55:49] 2026-01-14 08:55:07,898 | INFO     | sum of square deviations: 1294014960.0
[2026-01-14 09:55:49] 2026-01-14 08:55:07,899 | INFO     | sum of deviations: -19718903615.0
[2026-01-14 09:55:49] 2026-01-14 08:55:07,899 | INFO     | mean x: 1768375906.0
[2026-01-14 09:55:49] 2026-01-14 08:55:07,899 | INFO     | mean y: 2511398.4285714286
[2026-01-14 09:55:49] 2026-01-14 08:55:07,899 | INFO     | intersect: 26949985054.76273
[2026-01-14 09:55:49] 2026-01-14 08:55:07,899 | INFO     | chi2: 1.7825572451550369
[2026-01-14 09:55:49] 2026-01-14 08:55:07,900 | INFO     | current chi2=1.7825572451550369 (change=44.14029330376685 %)
[2026-01-14 09:55:49] 2026-01-14 08:55:07,910 | INFO     | sum of square deviations: 1177156955.0
[2026-01-14 09:55:49] 2026-01-14 08:55:07,911 | INFO     | sum of deviations: -19646012732.5
[2026-01-14 09:55:49] 2026-01-14 08:55:07,911 | INFO     | mean x: 1768376058.5
[2026-01-14 09:55:49] 2026-01-14 08:55:07,912 | INFO     | mean y: 2511199.967948718
[2026-01-14 09:55:49] 2026-01-14 08:55:07,912 | INFO     | intersect: 29515600693.746765
[2026-01-14 09:55:49] 2026-01-14 08:55:07,912 | INFO     | chi2: 1.7566080208826778
[2026-01-14 09:55:49] 2026-01-14 08:55:07,912 | INFO     | current chi2=1.7566080208826778 (change=1.455730206863691 %)
[2026-01-14 09:55:49] 2026-01-14 08:55:07,912 | INFO     | left removable region: 30
[2026-01-14 09:55:49] 2026-01-14 08:55:07,913 | INFO     | sum of square deviations: 762879420.0
[2026-01-14 09:55:49] 2026-01-14 08:55:07,914 | INFO     | sum of deviations: 2364638892.000001
[2026-01-14 09:55:49] 2026-01-14 08:55:07,914 | INFO     | mean x: 1768376333.0
[2026-01-14 09:55:49] 2026-01-14 08:55:07,914 | INFO     | mean y: 2540233.985185185
[2026-01-14 09:55:49] 2026-01-14 08:55:07,914 | INFO     | intersect: -5478760405.510562
[2026-01-14 09:55:49] 2026-01-14 08:55:07,914 | INFO     | chi2: 0.0002282582143157522
[2026-01-14 09:55:49] 2026-01-14 08:55:07,915 | INFO     | current memory leak: 3.10 B/s (using 135 data points, chi2=0.00)
[2026-01-14 09:55:49] 2026-01-14 08:55:07,915 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-01-14 09:55:49] 2026-01-14 08:55:07,916 | INFO     | ..............................
[2026-01-14 09:55:49] 2026-01-14 08:55:07,916 | INFO     | . Timing measurements:
[2026-01-14 09:55:49] 2026-01-14 08:55:07,916 | INFO     | . get job = 0 s
[2026-01-14 09:55:49] 2026-01-14 08:55:07,916 | INFO     | . initial setup = 6 s
[2026-01-14 09:55:49] 2026-01-14 08:55:07,916 | INFO     | . payload setup = 140 s
[2026-01-14 09:55:49] 2026-01-14 08:55:07,916 | INFO     | . stage-in = 0 s
[2026-01-14 09:55:49] 2026-01-14 08:55:07,916 | INFO     | . payload execution = 10549 s
[2026-01-14 09:55:49] 2026-01-14 08:55:07,916 | INFO     | . stage-out = 4 s
[2026-01-14 09:55:49] 2026-01-14 08:55:07,916 | INFO     | . log creation = 1 s
[2026-01-14 09:55:49] 2026-01-14 08:55:07,916 | INFO     | ..............................
[2026-01-14 09:55:49] 2026-01-14 08:55:08,090 | INFO     | 
[2026-01-14 09:55:49] 2026-01-14 08:55:08,090 | INFO     | job summary report
[2026-01-14 09:55:49] 2026-01-14 08:55:08,090 | INFO     | --------------------------------------------------
[2026-01-14 09:55:49] 2026-01-14 08:55:08,090 | INFO     | PanDA job id: 6969274986
[2026-01-14 09:55:49] 2026-01-14 08:55:08,091 | INFO     | task id: 48215263
[2026-01-14 09:55:49] 2026-01-14 08:55:08,091 | INFO     | errors: (none)
[2026-01-14 09:55:49] 2026-01-14 08:55:08,091 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 09:55:49] 2026-01-14 08:55:08,091 | INFO     | pilot state: finished 
[2026-01-14 09:55:49] 2026-01-14 08:55:08,091 | INFO     | transexitcode: 0
[2026-01-14 09:55:49] 2026-01-14 08:55:08,091 | INFO     | exeerrorcode: 0
[2026-01-14 09:55:49] 2026-01-14 08:55:08,091 | INFO     | exeerrordiag: 
[2026-01-14 09:55:49] 2026-01-14 08:55:08,091 | INFO     | exitcode: 0
[2026-01-14 09:55:49] 2026-01-14 08:55:08,091 | INFO     | exitmsg: OK
[2026-01-14 09:55:49] 2026-01-14 08:55:08,092 | INFO     | cpuconsumptiontime: 37888 s
[2026-01-14 09:55:49] 2026-01-14 08:55:08,092 | INFO     | nevents: 400
[2026-01-14 09:55:49] 2026-01-14 08:55:08,092 | INFO     | neventsw: 0
[2026-01-14 09:55:49] 2026-01-14 08:55:08,092 | INFO     | pid: 9994
[2026-01-14 09:55:49] 2026-01-14 08:55:08,092 | INFO     | pgrp: 9994
[2026-01-14 09:55:49] 2026-01-14 08:55:08,092 | INFO     | corecount: 8
[2026-01-14 09:55:49] 2026-01-14 08:55:08,092 | INFO     | event service: False
[2026-01-14 09:55:49] 2026-01-14 08:55:08,092 | INFO     | sizes: {0: 2283945, 1: 2283973, 12: 2283973, 22: 2284001, 33: 2284029, 44: 2284085, 55: 2284241, 65: 2284269, 76: 2284297, 87: 2284353, 98: 2284381, 105: 2284951, 
[2026-01-14 09:55:49] 2026-01-14 08:55:08,092 | INFO     | --------------------------------------------------
[2026-01-14 09:55:49] 2026-01-14 08:55:08,093 | INFO     | 
[2026-01-14 09:55:49] 2026-01-14 08:55:08,093 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-01-14 09:55:49] 2026-01-14 08:55:08,470 | INFO     | time since job start (11027s) is within the limit (349056.0s)
[2026-01-14 09:55:49] 2026-01-14 08:55:08,471 | INFO     | 11033s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-14 09:55:49] 2026-01-14 08:55:08,504 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 09:55:49] 2026-01-14 08:55:08,504 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 09:55:49] 2026-01-14 08:55:08,504 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 09:55:49] 2026-01-14 08:55:08,504 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 09:55:49] 2026-01-14 08:55:08,504 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 09:55:49] 2026-01-14 08:55:08,504 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 09:55:49] 2026-01-14 08:55:08,504 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 09:55:49] 2026-01-14 08:55:08,504 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 09:55:49] 2026-01-14 08:55:08,505 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 09:55:49] 2026-01-14 08:55:08,505 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 09:55:49] 2026-01-14 08:55:08,505 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 09:55:49] 2026-01-14 08:55:08,505 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 09:55:49] 2026-01-14 08:55:08,505 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 09:55:49] 2026-01-14 08:55:08,505 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 09:55:49] 2026-01-14 08:55:08,505 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 09:55:49] 2026-01-14 08:55:08,505 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 09:55:49] 2026-01-14 08:55:08,505 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 09:55:49] 2026-01-14 08:55:08,505 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 09:55:49] 2026-01-14 08:55:08,506 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 09:55:49] 2026-01-14 08:55:08,506 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 09:55:49] 2026-01-14 08:55:08,506 | INFO     | job 6969274986 has completed (purged errors)
[2026-01-14 09:55:49] 2026-01-14 08:55:08,506 | INFO     | overall cleanup function is called
[2026-01-14 09:55:49] 2026-01-14 08:55:09,515 | INFO     | --- collectZombieJob: --- 10, [9994]
[2026-01-14 09:55:49] 2026-01-14 08:55:09,515 | INFO     | zombie collector waiting for pid 9994
[2026-01-14 09:55:49] 2026-01-14 08:55:09,516 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 09:55:49] 2026-01-14 08:55:09,516 | INFO     | collected zombie processes
[2026-01-14 09:55:49] 2026-01-14 08:55:09,516 | INFO     | will attempt to kill all subprocesses of pid=9994
[2026-01-14 09:55:49] 2026-01-14 08:55:09,677 | INFO     | PID=3445 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-14 09:55:49] 2026-01-14 08:55:09,678 | INFO     | .. there are 2 such processes running
[2026-01-14 09:55:49] 2026-01-14 08:55:09,738 | INFO     | process IDs to be killed: [9994] (in reverse order)
[2026-01-14 09:55:49] 2026-01-14 08:55:10,412 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 09:55:49] 2026-01-14 08:55:10,412 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 09:55:49] 2026-01-14 08:55:10,414 | INFO     | did not find any defunct processes belonging to 9994
[2026-01-14 09:55:49] 2026-01-14 08:55:10,416 | INFO     | did not find any defunct processes belonging to 9994
[2026-01-14 09:55:49] 2026-01-14 08:55:10,417 | INFO     | ready for new job
[2026-01-14 09:55:49] 2026-01-14 08:55:10,417 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 09:55:49] 2026-01-14 08:55:10,419 | INFO     | ***************************************
[2026-01-14 09:55:49] 2026-01-14 08:55:10,419 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 09:55:49] 2026-01-14 08:55:10,419 | INFO     | ***************************************
[2026-01-14 09:55:49] 2026-01-14 08:55:10,419 | INFO     | 
[2026-01-14 09:55:49] 2026-01-14 08:55:10,420 | INFO     | pilot is running in a VM
[2026-01-14 09:55:49] 2026-01-14 08:55:10,420 | INFO     | architecture information:
[2026-01-14 09:55:49] 2026-01-14 08:55:10,423 | INFO     | executing command: cat /etc/os-release
[2026-01-14 09:55:49] 2026-01-14 08:55:10,662 | INFO     | cat /etc/os-release:
[2026-01-14 09:55:49] NAME="CentOS Linux"
[2026-01-14 09:55:49] VERSION="7 (Core)"
[2026-01-14 09:55:49] ID="centos"
[2026-01-14 09:55:49] ID_LIKE="rhel fedora"
[2026-01-14 09:55:49] VERSION_ID="7"
[2026-01-14 09:55:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 09:55:49] ANSI_COLOR="0;31"
[2026-01-14 09:55:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 09:55:49] HOME_URL="https://www.centos.org/"
[2026-01-14 09:55:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 09:55:49] 
[2026-01-14 09:55:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 09:55:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 09:55:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 09:55:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 09:55:49] 
[2026-01-14 09:55:49] 2026-01-14 08:55:10,663 | INFO     | ***************************************
[2026-01-14 09:55:49] 2026-01-14 08:55:11,166 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-01-14 09:55:49] 2026-01-14 08:55:11,487 | INFO     | sufficient remaining disk space (494203305984 B)
[2026-01-14 09:55:49] 2026-01-14 08:55:11,487 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 09:55:49] 2026-01-14 08:55:11,487 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 09:55:49] 2026-01-14 08:55:11,487 | INFO     | update_server=False
[2026-01-14 09:55:49] 2026-01-14 08:55:11,487 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 09:55:49] 2026-01-14 08:55:11,494 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 09:55:49] 2026-01-14 08:55:11,753 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 09:55:49] 2026-01-14 08:55:11,753 | INFO     | aborting loop
[2026-01-14 09:55:49] 2026-01-14 08:55:12,314 | INFO     | all payload control threads have been joined
[2026-01-14 09:55:49] 2026-01-14 08:55:12,319 | INFO     | all data control threads have been joined
[2026-01-14 09:55:49] 2026-01-14 08:55:12,484 | INFO     | all job control threads have been joined
[2026-01-14 09:55:49] 2026-01-14 08:55:12,493 | INFO     | [job] retrieve thread has finished
[2026-01-14 09:55:49] 2026-01-14 08:55:12,507 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 09:55:49] 2026-01-14 08:55:12,710 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 09:55:49] 2026-01-14 08:55:12,711 | INFO     | [data] copytool_in thread has finished
[2026-01-14 09:55:49] 2026-01-14 08:55:12,759 | INFO     | [job] job monitor thread has finished
[2026-01-14 09:55:49] 2026-01-14 08:55:12,856 | INFO     | [payload] validate_post thread has finished
[2026-01-14 09:55:49] 2026-01-14 08:55:13,034 | INFO     | [job] validate thread has finished
[2026-01-14 09:55:49] 2026-01-14 08:55:13,104 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 09:55:49] 2026-01-14 08:55:13,168 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 09:55:49] 2026-01-14 08:55:13,320 | INFO     | [payload] control thread has finished
[2026-01-14 09:55:49] 2026-01-14 08:55:13,325 | INFO     | [data] control thread has finished
[2026-01-14 09:55:49] 2026-01-14 08:55:13,490 | INFO     | [job] control thread has finished
[2026-01-14 09:55:49] 2026-01-14 08:55:13,501 | INFO     | [data] copytool_out thread has finished
[2026-01-14 09:55:49] 2026-01-14 08:55:13,683 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 09:55:49] 2026-01-14 08:55:14,096 | INFO     | [payload] failed_post thread has finished
[2026-01-14 09:55:49] 2026-01-14 08:55:14,110 | INFO     | [job] queue monitor thread has finished
[2026-01-14 09:55:49] 2026-01-14 08:55:17,692 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 09:55:49] 2026-01-14 08:55:22,311 | INFO     | job.realtimelogging is not enabled
[2026-01-14 09:55:49] 2026-01-14 08:55:23,317 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 09:55:49] 2026-01-14 08:55:39,635 | INFO     | [monitor] cgroup control has ended
[2026-01-14 09:55:49] 2026-01-14 08:55:40,558 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140404415227712)>', '<ExcThread(monitor, started 140403613361920)>']
[2026-01-14 09:55:49] 2026-01-14 08:55:41,796 | INFO     | PID=3445 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-14 09:55:49] 2026-01-14 08:55:41,797 | INFO     | .. there are 2 such processes running
[2026-01-14 09:55:49] 2026-01-14 08:55:41,797 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 09:55:49] 2026-01-14 08:55:41,797 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 09:55:49] 2026-01-14 08:55:41,797 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 09:55:49] 2026-01-14 08:55:41,797 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 09:55:49] 2026-01-14 08:55:41,797 | INFO     | [monitor] control thread has ended
[2026-01-14 09:55:49] 2026-01-14 08:55:45,584 | INFO     | all workflow threads have been joined
[2026-01-14 09:55:49] 2026-01-14 08:55:45,584 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 09:55:49] 2026-01-14 08:55:45,585 | INFO     | traces error code: 0
[2026-01-14 09:55:49] 2026-01-14 08:55:45,585 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 09:55:49] 2026-01-14 08:55:45,924 [wrapper] ==== pilot stdout END ====
[2026-01-14 09:55:49] 2026-01-14 08:55:46,046 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 09:55:49] 2026-01-14 08:55:46,126 [wrapper] pilotpid: 3445
[2026-01-14 09:55:49] 2026-01-14 08:55:46,204 [wrapper] Pilot exit status: 0
[2026-01-14 09:55:49] 2026-01-14 08:55:46,816 [wrapper] pandaids: 6969274986
[2026-01-14 09:55:49] 2026-01-14 08:55:47,750 [wrapper] cleanup supervisor_pilot 28928 3446
[2026-01-14 09:55:49] 2026-01-14 08:55:47,833 [wrapper] Test setup, not cleaning
[2026-01-14 09:55:49] 2026-01-14 08:55:47,933 [wrapper] apfmon messages muted
[2026-01-14 09:55:49] 2026-01-14 08:55:48,027 [wrapper] ==== wrapper stdout END ====
[2026-01-14 09:55:49] 2026-01-14 08:55:48,098 [wrapper] ==== wrapper stderr END ====
[2026-01-14 09:55:49]  *** Error codes and diagnostics ***
[2026-01-14 09:55:49]     "exeErrorCode": 0,
[2026-01-14 09:55:49]     "exeErrorDiag": "",
[2026-01-14 09:55:49]     "pilotErrorCode": 0,
[2026-01-14 09:55:49]     "pilotErrorDiag": "",
[2026-01-14 09:55:49]  *** Listing of results directory ***
[2026-01-14 09:55:49] total 748256
[2026-01-14 09:55:49] -rw-r--r--. 1 boinc boinc    579449 Jan 14 00:46 pilot3.tar.gz
[2026-01-14 09:55:49] -rw-r--r--. 1 boinc boinc      5112 Jan 14 00:46 queuedata.json
[2026-01-14 09:55:49] -rwx------. 1 boinc boinc     36322 Jan 14 00:47 runpilot2-wrapper.sh
[2026-01-14 09:55:49] -rw-r--r--. 1 boinc boinc       100 Jan 14 06:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 09:55:49] -rwxr-xr-x. 1 boinc boinc      7986 Jan 14 06:46 run_atlas
[2026-01-14 09:55:49] -rw-r--r--. 1 boinc boinc       105 Jan 14 06:46 job.xml
[2026-01-14 09:55:49] -rw-r--r--. 2 boinc boinc 601176029 Jan 14 06:46 EVNT.32794306._000358.pool.root.1
[2026-01-14 09:55:49] -rw-r--r--. 1 boinc boinc      6391 Jan 14 06:46 init_data.xml
[2026-01-14 09:55:49] -rw-r--r--. 2 boinc boinc     15847 Jan 14 06:46 start_atlas.sh
[2026-01-14 09:55:49] drwxrwx--x. 2 boinc boinc        68 Jan 14 06:46 shared
[2026-01-14 09:55:49] -rw-r--r--. 2 boinc boinc    592387 Jan 14 06:46 input.tar.gz
[2026-01-14 09:55:49] -rw-r--r--. 1 boinc boinc         0 Jan 14 06:46 boinc_lockfile
[2026-01-14 09:55:49] -rw-r--r--. 1 boinc boinc      2505 Jan 14 06:46 pandaJob.out
[2026-01-14 09:55:49] -rw-------. 1 boinc boinc    997226 Jan 14 06:51 agis_schedconf.cvmfs.json
[2026-01-14 09:55:49] drwx------. 5 boinc boinc      4096 Jan 14 06:51 pilot3
[2026-01-14 09:55:49] -rw-------. 1 boinc boinc 157361829 Jan 14 09:51 HITS.48215263._008932.pool.root.1
[2026-01-14 09:55:49] -rw-r--r--. 1 boinc boinc       531 Jan 14 09:52 boinc_task_state.xml
[2026-01-14 09:55:49] -rw-------. 1 boinc boinc      1025 Jan 14 09:53 memory_monitor_summary.json
[2026-01-14 09:55:49] -rw-------. 1 boinc boinc   1516246 Jan 14 09:53 agis_ddmendpoints.agis.ALL.json
[2026-01-14 09:55:49] -rw-------. 1 boinc boinc    402081 Jan 14 09:53 log.48215263._008932.job.log.tgz.1
[2026-01-14 09:55:49] -rw-------. 1 boinc boinc        95 Jan 14 09:54 pilot_heartbeat.json
[2026-01-14 09:55:49] -rw-------. 1 boinc boinc      7771 Jan 14 09:55 heartbeat.json
[2026-01-14 09:55:49] -rw-r--r--. 1 boinc boinc      8192 Jan 14 09:55 boinc_mmap_file
[2026-01-14 09:55:49] -rw-r--r--. 1 boinc boinc        28 Jan 14 09:55 wrapper_checkpoint.txt
[2026-01-14 09:55:49] -rw-------. 1 boinc boinc      4955 Jan 14 09:55 pilotlog.txt
[2026-01-14 09:55:49] -rw-------. 1 boinc boinc   1478338 Jan 14 09:55 log.48215263._008932.job.log.1
[2026-01-14 09:55:49] -rw-------. 1 boinc boinc       357 Jan 14 09:55 output.list
[2026-01-14 09:55:49] -rw-r--r--. 1 boinc boinc       620 Jan 14 09:55 runtime_log
[2026-01-14 09:55:49] -rw-------. 1 boinc boinc   1904640 Jan 14 09:55 result.tar.gz
[2026-01-14 09:55:49] -rw-r--r--. 1 boinc boinc      8817 Jan 14 09:55 runtime_log.err
[2026-01-14 09:55:49] -rw-------. 1 boinc boinc       656 Jan 14 09:55 I1QMDmjH3z8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmP6iKDmoifZHo.diag
[2026-01-14 09:55:49] -rw-r--r--. 1 boinc boinc     20826 Jan 14 09:55 stderr.txt
[2026-01-14 09:55:49] HITS file was successfully produced:
[2026-01-14 09:55:49] -rw-------. 1 boinc boinc 157361829 Jan 14 09:51 shared/HITS.pool.root.1
[2026-01-14 09:55:49]  *** Contents of shared directory: ***
[2026-01-14 09:55:49] total 743220
[2026-01-14 09:55:49] -rw-r--r--. 2 boinc boinc 601176029 Jan 14 06:46 ATLAS.root_0
[2026-01-14 09:55:49] -rw-r--r--. 2 boinc boinc     15847 Jan 14 06:46 start_atlas.sh
[2026-01-14 09:55:49] -rw-r--r--. 2 boinc boinc    592387 Jan 14 06:46 input.tar.gz
[2026-01-14 09:55:49] -rw-------. 1 boinc boinc 157361829 Jan 14 09:51 HITS.pool.root.1
[2026-01-14 09:55:49] -rw-------. 1 boinc boinc   1904640 Jan 14 09:55 result.tar.gz
09:55:50 (31904): run_atlas exited; CPU time 38005.023588
09:55:50 (31904): called boinc_finish(0)

</stderr_txt>
]]>

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