Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
02:35:55 (532657): wrapper (7.7.26015): starting
02:35:55 (532657): wrapper: running run_atlas (--nthreads 3)
[2026-01-19 02:35:55] Arguments: --nthreads 3
[2026-01-19 02:35:55] Threads: 3
[2026-01-19 02:35:55] Checking for CVMFS
[2026-01-19 02:35:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-19 02:35:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-19 02:35:55] Running cvmfs_config stat atlas.cern.ch
[2026-01-19 02:35:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-19 02:35:55] 2.12.7.0 1189665 16447 70124 155297 0 57 4975072 6144000 917 130560 1 10327388 99.922 1098871 1830 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.42:3128 1
[2026-01-19 02:35:55] CVMFS is ok
[2026-01-19 02:35:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-19 02:35:55] Checking for apptainer binary...
[2026-01-19 02:35:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-19 02:35:55] Running /usr/bin/apptainer --version
[2026-01-19 02:35:55] apptainer version 1.4.5
[2026-01-19 02:35:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-19 02:35:55] Beta
[2026-01-19 02:35:55] apptainer works
[2026-01-19 02:35:55] Set ATHENA_PROC_NUMBER=3
[2026-01-19 02:35:55] Set ATHENA_CORE_NUMBER=3
[2026-01-19 02:35:55] Starting ATLAS job with PandaID=6969271411
[2026-01-19 02:35:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-19 04:06:14]  *** The last 200 lines of the pilot log: ***
[2026-01-19 04:06:14]  lfn=log.48215263._006662.job.log.tgz.1
[2026-01-19 04:06:14]  mtime=0
[2026-01-19 04:06:14]  protocol_id=None
[2026-01-19 04:06:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-19 04:06:14]  replicas=None
[2026-01-19 04:06:14]  scope=mc23_13p6TeV
[2026-01-19 04:06:14]  status=None
[2026-01-19 04:06:14]  status_code=0
[2026-01-19 04:06:14]  storage_token=
[2026-01-19 04:06:14]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6969271411/log.48215263._006662.job.log.tgz.1
[2026-01-19 04:06:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c8/14/log.48215263._006662.job.log.tgz.1
[2026-01-19 04:06:14]  workdir=None
[2026-01-19 04:06:14] ]
[2026-01-19 04:06:14] 2026-01-19 03:05:17,231 | INFO     | transferring file log.48215263._006662.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6969271411/log.48215263._006662.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-01-19 04:06:14] 2026-01-19 03:05:17,231 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6969271411/log.48215263._006662.job.log.tgz.1 /var/lib/boinc/slots/1/log.48215263._006662.job
[2026-01-19 04:06:14] 2026-01-19 03:05:17,241 | INFO     | adding to output.list: log.48215263._006662.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c8/14/log.48215263._006662.job.log.tg
[2026-01-19 04:06:14] 2026-01-19 03:05:17,242 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-19 04:06:14] 2026-01-19 03:05:17,242 | INFO     | summary of transferred files:
[2026-01-19 04:06:14] 2026-01-19 03:05:17,242 | INFO     |  -- lfn=log.48215263._006662.job.log.tgz.1, status_code=0, status=transferred
[2026-01-19 04:06:14] 2026-01-19 03:05:17,242 | INFO     | stage-out finished correctly
[2026-01-19 04:06:14] 2026-01-19 03:05:17,285 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-19 04:06:14] 2026-01-19 03:05:17,344 | INFO     | job 6969271411 has state=finished
[2026-01-19 04:06:14] 2026-01-19 03:05:17,344 | INFO     | preparing for final server update for job 6969271411 in state='finished'
[2026-01-19 04:06:14] 2026-01-19 03:05:17,344 | INFO     | this job has now completed (state=finished)
[2026-01-19 04:06:14] 2026-01-19 03:05:17,344 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-19 04:06:14] 2026-01-19 03:05:17,344 | INFO     | log transfer has been attempted: DONE
[2026-01-19 04:06:14] 2026-01-19 03:05:17,344 | INFO     | job 6969271411 has finished - writing final server update
[2026-01-19 04:06:14] 2026-01-19 03:05:17,345 | INFO     | total number of processed events: 400 (read)
[2026-01-19 04:06:14] 2026-01-19 03:05:17,345 | INFO     | executing command: lscpu
[2026-01-19 04:06:14] 2026-01-19 03:05:17,354 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-19 04:06:14] 2026-01-19 03:05:17,656 | INFO     | time since job start (5357s) is within the limit (349056.0s)
[2026-01-19 04:06:14] 2026-01-19 03:05:18,060 | INFO     | monitor loop #409: job 0:6969271411 is in state 'finished'
[2026-01-19 04:06:14] 2026-01-19 03:05:18,060 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-19 04:06:14] 2026-01-19 03:05:18,751 | INFO     | PID=536631 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-19 04:06:14] 2026-01-19 03:05:18,752 | INFO     | .. there are 2 such processes running
[2026-01-19 04:06:14] 2026-01-19 03:05:19,752 | INFO     | time since job start (5359s) is within the limit (349056.0s)
[2026-01-19 04:06:14] 2026-01-19 03:05:20,466 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-19 04:06:14] 2026-01-19 03:05:20,467 | INFO     | found 4 cores (4 cores per socket, 1 socket) HT, CPU MHz: 3700.25675
[2026-01-19 04:06:14] 2026-01-19 03:05:20,467 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6969271411/memory_monitor_summary.json (trf name=prmon)
[2026-01-19 04:06:14] 2026-01-19 03:05:20,468 | INFO     | extracted standard info from prmon json
[2026-01-19 04:06:14] 2026-01-19 03:05:20,468 | INFO     | extracted standard memory fields from prmon json
[2026-01-19 04:06:14] 2026-01-19 03:05:20,468 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-19 04:06:14] 2026-01-19 03:05:20,468 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-19 04:06:14] 2026-01-19 03:05:20,468 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-19 04:06:14] 2026-01-19 03:05:20,469 | INFO     | fitting pss+swap vs Time
[2026-01-19 04:06:14] 2026-01-19 03:05:20,469 | INFO     | sum of square deviations: 164765880.0
[2026-01-19 04:06:14] 2026-01-19 03:05:20,469 | INFO     | sum of deviations: -12935758331.999998
[2026-01-19 04:06:14] 2026-01-19 03:05:20,469 | INFO     | mean x: 1768789325.0
[2026-01-19 04:06:14] 2026-01-19 03:05:20,469 | INFO     | mean y: 2465554.5185185187
[2026-01-19 04:06:14] 2026-01-19 03:05:20,469 | INFO     | intersect: 138869998373.9433
[2026-01-19 04:06:14] 2026-01-19 03:05:20,469 | INFO     | chi2: 0.06139724168140017
[2026-01-19 04:06:14] 2026-01-19 03:05:20,469 | INFO     | current memory leak: -78.51 B/s (using 81 data points, chi2=0.06)
[2026-01-19 04:06:14] 2026-01-19 03:05:20,470 | INFO     | could have reported an average CPU frequency of 3700 MHz (6 samples)
[2026-01-19 04:06:14] 2026-01-19 03:05:20,470 | INFO     | ..............................
[2026-01-19 04:06:14] 2026-01-19 03:05:20,470 | INFO     | . Timing measurements:
[2026-01-19 04:06:14] 2026-01-19 03:05:20,470 | INFO     | . get job = 0 s
[2026-01-19 04:06:14] 2026-01-19 03:05:20,470 | INFO     | . initial setup = 1 s
[2026-01-19 04:06:14] 2026-01-19 03:05:20,470 | INFO     | . payload setup = 2 s
[2026-01-19 04:06:14] 2026-01-19 03:05:20,470 | INFO     | . stage-in = 0 s
[2026-01-19 04:06:14] 2026-01-19 03:05:20,470 | INFO     | . payload execution = 5336 s
[2026-01-19 04:06:14] 2026-01-19 03:05:20,470 | INFO     | . stage-out = 0 s
[2026-01-19 04:06:14] 2026-01-19 03:05:20,470 | INFO     | . log creation = 0 s
[2026-01-19 04:06:14] 2026-01-19 03:05:20,470 | INFO     | ..............................
[2026-01-19 04:06:14] 2026-01-19 03:05:20,605 | INFO     | 
[2026-01-19 04:06:14] 2026-01-19 03:05:20,605 | INFO     | job summary report
[2026-01-19 04:06:14] 2026-01-19 03:05:20,605 | INFO     | --------------------------------------------------
[2026-01-19 04:06:14] 2026-01-19 03:05:20,605 | INFO     | PanDA job id: 6969271411
[2026-01-19 04:06:14] 2026-01-19 03:05:20,605 | INFO     | task id: 48215263
[2026-01-19 04:06:14] 2026-01-19 03:05:20,605 | INFO     | errors: (none)
[2026-01-19 04:06:14] 2026-01-19 03:05:20,605 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-19 04:06:14] 2026-01-19 03:05:20,605 | INFO     | pilot state: finished 
[2026-01-19 04:06:14] 2026-01-19 03:05:20,605 | INFO     | transexitcode: 0
[2026-01-19 04:06:14] 2026-01-19 03:05:20,605 | INFO     | exeerrorcode: 0
[2026-01-19 04:06:14] 2026-01-19 03:05:20,605 | INFO     | exeerrordiag: 
[2026-01-19 04:06:14] 2026-01-19 03:05:20,605 | INFO     | exitcode: 0
[2026-01-19 04:06:14] 2026-01-19 03:05:20,605 | INFO     | exitmsg: OK
[2026-01-19 04:06:14] 2026-01-19 03:05:20,605 | INFO     | cpuconsumptiontime: 15640 s
[2026-01-19 04:06:14] 2026-01-19 03:05:20,605 | INFO     | nevents: 400
[2026-01-19 04:06:14] 2026-01-19 03:05:20,605 | INFO     | neventsw: 0
[2026-01-19 04:06:14] 2026-01-19 03:05:20,605 | INFO     | pid: 545078
[2026-01-19 04:06:14] 2026-01-19 03:05:20,605 | INFO     | pgrp: 545078
[2026-01-19 04:06:14] 2026-01-19 03:05:20,605 | INFO     | corecount: 3
[2026-01-19 04:06:14] 2026-01-19 03:05:20,606 | INFO     | event service: False
[2026-01-19 04:06:14] 2026-01-19 03:05:20,606 | INFO     | sizes: {0: 2283945, 2: 2284207, 10: 2284235, 5343: 2310815, 5344: 2319869, 5347: 2320007}
[2026-01-19 04:06:14] 2026-01-19 03:05:20,606 | INFO     | --------------------------------------------------
[2026-01-19 04:06:14] 2026-01-19 03:05:20,606 | INFO     | 
[2026-01-19 04:06:14] 2026-01-19 03:05:20,606 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2026-01-19 04:06:14] 2026-01-19 03:05:20,615 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-19 04:06:14] 2026-01-19 03:05:20,615 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-19 04:06:14] 2026-01-19 03:05:20,616 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-19 04:06:14] 2026-01-19 03:05:20,616 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-19 04:06:14] 2026-01-19 03:05:20,616 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-19 04:06:14] 2026-01-19 03:05:20,616 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-19 04:06:14] 2026-01-19 03:05:20,616 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-19 04:06:14] 2026-01-19 03:05:20,616 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-19 04:06:14] 2026-01-19 03:05:20,616 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-19 04:06:14] 2026-01-19 03:05:20,616 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-19 04:06:14] 2026-01-19 03:05:20,616 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-19 04:06:14] 2026-01-19 03:05:20,616 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-19 04:06:14] 2026-01-19 03:05:20,616 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-19 04:06:14] 2026-01-19 03:05:20,616 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-19 04:06:14] 2026-01-19 03:05:20,616 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-19 04:06:14] 2026-01-19 03:05:20,616 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-19 04:06:14] 2026-01-19 03:05:20,616 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-19 04:06:14] 2026-01-19 03:05:20,617 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-19 04:06:14] 2026-01-19 03:05:20,617 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-19 04:06:14] 2026-01-19 03:05:20,617 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-19 04:06:14] 2026-01-19 03:05:20,617 | INFO     | job 6969271411 has completed (purged errors)
[2026-01-19 04:06:14] 2026-01-19 03:05:20,617 | INFO     | overall cleanup function is called
[2026-01-19 04:06:14] 2026-01-19 03:05:21,623 | INFO     | --- collectZombieJob: --- 10, [545078]
[2026-01-19 04:06:14] 2026-01-19 03:05:21,623 | INFO     | zombie collector waiting for pid 545078
[2026-01-19 04:06:14] 2026-01-19 03:05:21,623 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-19 04:06:14] 2026-01-19 03:05:21,623 | INFO     | collected zombie processes
[2026-01-19 04:06:14] 2026-01-19 03:05:21,623 | INFO     | will attempt to kill all subprocesses of pid=545078
[2026-01-19 04:06:14] 2026-01-19 03:05:21,674 | INFO     | process IDs to be killed: [545078] (in reverse order)
[2026-01-19 04:06:14] 2026-01-19 03:05:21,696 | WARNING  | found no corresponding commands to process id(s)
[2026-01-19 04:06:14] 2026-01-19 03:05:21,697 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-19 04:06:14] 2026-01-19 03:05:21,699 | INFO     | did not find any defunct processes belonging to 545078
[2026-01-19 04:06:14] 2026-01-19 03:05:21,701 | INFO     | did not find any defunct processes belonging to 545078
[2026-01-19 04:06:14] 2026-01-19 03:05:21,701 | INFO     | ready for new job
[2026-01-19 04:06:14] 2026-01-19 03:05:21,701 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-19 04:06:14] 2026-01-19 03:05:21,702 | INFO     | ***************************************
[2026-01-19 04:06:14] 2026-01-19 03:05:21,702 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-19 04:06:14] 2026-01-19 03:05:21,702 | INFO     | ***************************************
[2026-01-19 04:06:14] 2026-01-19 03:05:21,702 | INFO     | 
[2026-01-19 04:06:14] 2026-01-19 03:05:21,703 | INFO     | architecture information:
[2026-01-19 04:06:14] 2026-01-19 03:05:21,703 | INFO     | executing command: cat /etc/os-release
[2026-01-19 04:06:14] 2026-01-19 03:05:21,709 | INFO     | cat /etc/os-release:
[2026-01-19 04:06:14] NAME="CentOS Linux"
[2026-01-19 04:06:14] VERSION="7 (Core)"
[2026-01-19 04:06:14] ID="centos"
[2026-01-19 04:06:14] ID_LIKE="rhel fedora"
[2026-01-19 04:06:14] VERSION_ID="7"
[2026-01-19 04:06:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-19 04:06:14] ANSI_COLOR="0;31"
[2026-01-19 04:06:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-19 04:06:14] HOME_URL="https://www.centos.org/"
[2026-01-19 04:06:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-19 04:06:14] 
[2026-01-19 04:06:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-19 04:06:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-19 04:06:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-19 04:06:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-19 04:06:14] 
[2026-01-19 04:06:14] 2026-01-19 03:05:21,710 | INFO     | ***************************************
[2026-01-19 04:06:14] 2026-01-19 03:05:22,212 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2026-01-19 04:06:14] 2026-01-19 03:05:22,219 | INFO     | sufficient remaining disk space (263338328064 B)
[2026-01-19 04:06:14] 2026-01-19 03:05:22,220 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-19 04:06:14] 2026-01-19 03:05:22,220 | INFO     | current server update state: UPDATING_FINAL
[2026-01-19 04:06:14] 2026-01-19 03:05:22,220 | INFO     | update_server=False
[2026-01-19 04:06:14] 2026-01-19 03:05:22,220 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-19 04:06:14] 2026-01-19 03:05:22,220 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-19 04:06:14] 2026-01-19 03:05:22,220 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-19 04:06:14] 2026-01-19 03:05:22,220 | INFO     | aborting loop
[2026-01-19 04:06:14] 2026-01-19 03:05:22,791 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-19 04:06:14] 2026-01-19 03:05:22,874 | INFO     | all data control threads have been joined
[2026-01-19 04:06:14] 2026-01-19 03:05:22,877 | INFO     | all payload control threads have been joined
[2026-01-19 04:06:14] 2026-01-19 03:05:23,225 | INFO     | [job] retrieve thread has finished
[2026-01-19 04:06:14] 2026-01-19 03:05:23,225 | INFO     | [job] queue monitor thread has finished
[2026-01-19 04:06:14] 2026-01-19 03:05:23,226 | INFO     | [job] job monitor thread has finished
[2026-01-19 04:06:14] 2026-01-19 03:05:23,309 | INFO     | [job] create_data_payload thread has finished
[2026-01-19 04:06:14] 2026-01-19 03:05:23,312 | INFO     | [payload] execute_payloads thread has finished
[2026-01-19 04:06:14] 2026-01-19 03:05:23,343 | INFO     | [payload] validate_pre thread has finished
[2026-01-19 04:06:14] 2026-01-19 03:05:23,348 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-19 04:06:14] 2026-01-19 03:05:23,395 | INFO     | all job control threads have been joined
[2026-01-19 04:06:14] 2026-01-19 03:05:23,797 | INFO     | [payload] failed_post thread has finished
[2026-01-19 04:06:14] 2026-01-19 03:05:23,880 | INFO     | [data] control thread has finished
[2026-01-19 04:06:14] 2026-01-19 03:05:23,882 | INFO     | [payload] control thread has finished
[2026-01-19 04:06:14] 2026-01-19 03:05:24,011 | INFO     | [data] copytool_in thread has finished
[2026-01-19 04:06:14] 2026-01-19 03:05:24,270 | INFO     | [payload] validate_post thread has finished
[2026-01-19 04:06:14] 2026-01-19 03:05:24,401 | INFO     | [job] control thread has finished
[2026-01-19 04:06:14] 2026-01-19 03:05:24,664 | INFO     | [job] validate thread has finished
[2026-01-19 04:06:14] 2026-01-19 03:05:24,795 | INFO     | [data] copytool_out thread has finished
[2026-01-19 04:06:14] 2026-01-19 03:05:27,354 | INFO     | [data] queue_monitor thread has finished
[2026-01-19 04:06:14] 2026-01-19 03:05:32,918 | INFO     | job.realtimelogging is not enabled
[2026-01-19 04:06:14] 2026-01-19 03:05:33,922 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-19 04:06:14] 2026-01-19 03:05:52,903 | INFO     | PID=536631 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-19 04:06:14] 2026-01-19 03:05:52,903 | INFO     | .. there are 2 such processes running
[2026-01-19 04:06:14] 2026-01-19 03:05:52,903 | INFO     | found 0 job(s) in 20 queues
[2026-01-19 04:06:14] 2026-01-19 03:05:52,903 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-19 04:06:14] 2026-01-19 03:05:52,903 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-19 04:06:14] 2026-01-19 03:05:59,382 [wrapper] supervise_pilot (15 min periods counter: 7)
[2026-01-19 04:06:14] 2026-01-19 03:06:08,857 | INFO     | [monitor] cgroup control has ended
[2026-01-19 04:06:14] 2026-01-19 03:06:09,775 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140440506148672)>', '<ExcThread(monitor, started 140439793432320)>']
[2026-01-19 04:06:14] 2026-01-19 03:06:09,982 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-19 04:06:14] 2026-01-19 03:06:09,982 | INFO     | [monitor] control thread has ended
[2026-01-19 04:06:14] 2026-01-19 03:06:14,800 | INFO     | all workflow threads have been joined
[2026-01-19 04:06:14] 2026-01-19 03:06:14,800 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-19 04:06:14] 2026-01-19 03:06:14,801 | INFO     | traces error code: 0
[2026-01-19 04:06:14] 2026-01-19 03:06:14,801 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-19 04:06:14] 2026-01-19 03:06:14,861 [wrapper] ==== pilot stdout END ====
[2026-01-19 04:06:14] 2026-01-19 03:06:14,862 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-19 04:06:14] 2026-01-19 03:06:14,864 [wrapper] pilotpid: 536631
[2026-01-19 04:06:14] 2026-01-19 03:06:14,865 [wrapper] Pilot exit status: 0
[2026-01-19 04:06:14] 2026-01-19 03:06:14,870 [wrapper] pandaids: 6969271411
[2026-01-19 04:06:14] 2026-01-19 03:06:14,885 [wrapper] cleanup supervisor_pilot  604825 536632
[2026-01-19 04:06:14] 2026-01-19 03:06:14,886 [wrapper] Test setup, not cleaning
[2026-01-19 04:06:14] 2026-01-19 03:06:14,888 [wrapper] apfmon messages muted
[2026-01-19 04:06:14] 2026-01-19 03:06:14,889 [wrapper] ==== wrapper stdout END ====
[2026-01-19 04:06:14] 2026-01-19 03:06:14,890 [wrapper] ==== wrapper stderr END ====
[2026-01-19 04:06:14]  *** Error codes and diagnostics ***
[2026-01-19 04:06:14]     "exeErrorCode": 0,
[2026-01-19 04:06:14]     "exeErrorDiag": "",
[2026-01-19 04:06:14]     "pilotErrorCode": 0,
[2026-01-19 04:06:14]     "pilotErrorDiag": "",
[2026-01-19 04:06:14]  *** Listing of results directory ***
[2026-01-19 04:06:14] insgesamt 734124
[2026-01-19 04:06:14] -rwx------ 1 boinc boinc     36322 13. Jan 23:02 runpilot2-wrapper.sh
[2026-01-19 04:06:14] -rw-r--r-- 1 boinc boinc    579449 13. Jan 23:12 pilot3.tar.gz
[2026-01-19 04:06:14] -rw-r--r-- 1 boinc boinc      5112 13. Jan 23:20 queuedata.json
[2026-01-19 04:06:14] -rw-r--r-- 1 boinc boinc       100 19. Jan 02:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-19 04:06:14] -rwxr-xr-x 1 boinc boinc      7986 19. Jan 02:35 run_atlas
[2026-01-19 04:06:14] -rw-r--r-- 1 boinc boinc       105 19. Jan 02:35 job.xml
[2026-01-19 04:06:14] -rw-r--r-- 1 boinc boinc      6741 19. Jan 02:35 init_data.xml
[2026-01-19 04:06:14] -rw-r--r-- 2 boinc boinc 597506558 19. Jan 02:35 EVNT.32794306._000267.pool.root.1
[2026-01-19 04:06:14] drwxrwx--x 2 boinc boinc      4096 19. Jan 02:35 shared
[2026-01-19 04:06:14] -rw-r--r-- 2 boinc boinc    592395 19. Jan 02:35 input.tar.gz
[2026-01-19 04:06:14] -rw-r--r-- 2 boinc boinc     15847 19. Jan 02:35 start_atlas.sh
[2026-01-19 04:06:14] -rw-r--r-- 1 boinc boinc         0 19. Jan 02:35 boinc_lockfile
[2026-01-19 04:06:14] -rw-r--r-- 1 boinc boinc      2505 19. Jan 02:35 pandaJob.out
[2026-01-19 04:06:14] -rw------- 1 boinc boinc        52 19. Jan 02:35 setup.sh.local
[2026-01-19 04:06:14] -rw------- 1 boinc boinc   1004109 19. Jan 02:35 agis_schedconf.cvmfs.json
[2026-01-19 04:06:14] -rw------- 1 boinc boinc   1516246 19. Jan 02:35 agis_ddmendpoints.agis.ALL.json
[2026-01-19 04:06:14] drwx------ 5 boinc boinc      4096 19. Jan 02:36 pilot3
[2026-01-19 04:06:14] -rw------- 1 boinc boinc 148197067 19. Jan 04:04 HITS.48215263._006662.pool.root.1
[2026-01-19 04:06:14] -rw-r--r-- 1 boinc boinc       530 19. Jan 04:05 boinc_task_state.xml
[2026-01-19 04:06:14] -rw------- 1 boinc boinc      1016 19. Jan 04:05 memory_monitor_summary.json
[2026-01-19 04:06:14] -rw------- 1 boinc boinc    256719 19. Jan 04:05 log.48215263._006662.job.log.tgz.1
[2026-01-19 04:06:14] -rw------- 1 boinc boinc      7741 19. Jan 04:05 heartbeat.json
[2026-01-19 04:06:14] -rw------- 1 boinc boinc        95 19. Jan 04:05 pilot_heartbeat.json
[2026-01-19 04:06:14] -rw-r--r-- 1 boinc boinc      8192 19. Jan 04:06 boinc_mmap_file
[2026-01-19 04:06:14] -rw-r--r-- 1 boinc boinc        27 19. Jan 04:06 wrapper_checkpoint.txt
[2026-01-19 04:06:14] -rw------- 1 boinc boinc      4895 19. Jan 04:06 pilotlog.txt
[2026-01-19 04:06:14] -rw------- 1 boinc boinc    794144 19. Jan 04:06 log.48215263._006662.job.log.1
[2026-01-19 04:06:14] -rw------- 1 boinc boinc       357 19. Jan 04:06 output.list
[2026-01-19 04:06:14] -rw-r--r-- 1 boinc boinc       620 19. Jan 04:06 runtime_log
[2026-01-19 04:06:14] -rw------- 1 boinc boinc   1075200 19. Jan 04:06 result.tar.gz
[2026-01-19 04:06:14] -rw-r--r-- 1 boinc boinc      9259 19. Jan 04:06 runtime_log.err
[2026-01-19 04:06:14] -rw------- 1 boinc boinc       639 19. Jan 04:06 fNSMDm8d1z8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm5EpKDmVBW52m.diag
[2026-01-19 04:06:14] -rw-r--r-- 1 boinc boinc     21348 19. Jan 04:06 stderr.txt
[2026-01-19 04:06:14] HITS file was successfully produced:
[2026-01-19 04:06:14] -rw------- 1 boinc boinc 148197067 19. Jan 04:04 shared/HITS.pool.root.1
[2026-01-19 04:06:14]  *** Contents of shared directory: ***
[2026-01-19 04:06:14] insgesamt 729884
[2026-01-19 04:06:14] -rw-r--r-- 2 boinc boinc 597506558 19. Jan 02:35 ATLAS.root_0
[2026-01-19 04:06:14] -rw-r--r-- 2 boinc boinc    592395 19. Jan 02:35 input.tar.gz
[2026-01-19 04:06:14] -rw-r--r-- 2 boinc boinc     15847 19. Jan 02:35 start_atlas.sh
[2026-01-19 04:06:14] -rw------- 1 boinc boinc 148197067 19. Jan 04:04 HITS.pool.root.1
[2026-01-19 04:06:14] -rw------- 1 boinc boinc   1075200 19. Jan 04:06 result.tar.gz
04:06:16 (532657): run_atlas exited; CPU time 15699.820103
04:06:16 (532657): called boinc_finish(0)

</stderr_txt>
]]>

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