Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:00:58 (864727): wrapper (7.7.26015): starting
21:00:58 (864727): wrapper: running run_atlas (--nthreads 8)
[2026-01-13 21:00:58] Arguments: --nthreads 8
[2026-01-13 21:00:58] Threads: 8
[2026-01-13 21:00:58] Checking for CVMFS
[2026-01-13 21:00:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-13 21:00:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-13 21:00:59] Running cvmfs_config stat atlas.cern.ch
[2026-01-13 21:00:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-13 21:00:59] 2.13.3.0 12563 29483 298408 155113 3 517 34422811 40960000 19335 16776704 0 39161613 99.774 19934031 33061 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-13 21:00:59] CVMFS is ok
[2026-01-13 21:00:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 21:00:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 21:00:59] Further information can be found at the LHC@home message board.
[2026-01-13 21:00:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 21:00:59] Checking for apptainer binary...
[2026-01-13 21:00:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-13 21:00:59] Running /usr/bin/apptainer --version
[2026-01-13 21:00:59] apptainer version 1.4.5-2.el9
[2026-01-13 21:00:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 21:00:59] c-211-33-3.aglt2.org
[2026-01-13 21:00:59] apptainer works
[2026-01-13 21:00:59] Set ATHENA_PROC_NUMBER=8
[2026-01-13 21:00:59] Set ATHENA_CORE_NUMBER=8
[2026-01-13 21:00:59] Starting ATLAS job with PandaID=6969265635
[2026-01-13 21:00:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 23:03:04]  *** The last 200 lines of the pilot log: ***
[2026-01-13 23:03:04] 2026-01-14 04:02:26,279 | INFO     | PID=869022 has CPU usage=11.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 23:03:04] 2026-01-14 04:02:26,279 | INFO     | .. there are 17 such processes running
[2026-01-13 23:03:04] 2026-01-14 04:02:27,303 | INFO     | time since job start (7263s) is within the limit (349056.0s)
[2026-01-13 23:03:04] 2026-01-14 04:02:28,396 | INFO     | monitor loop #481: job 0:6969265635 is in state 'finished'
[2026-01-13 23:03:04] 2026-01-14 04:02:28,399 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 23:03:04] 2026-01-14 04:02:29,314 | INFO     | time since job start (7265s) is within the limit (349056.0s)
[2026-01-13 23:03:04] 2026-01-14 04:02:30,601 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-13 23:03:04] 2026-01-14 04:02:30,654 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2718.4195729166663
[2026-01-13 23:03:04] 2026-01-14 04:02:30,688 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6969265635/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 23:03:04] 2026-01-14 04:02:30,688 | INFO     | extracted standard info from prmon json
[2026-01-13 23:03:04] 2026-01-14 04:02:30,689 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 23:03:04] 2026-01-14 04:02:30,689 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 23:03:04] 2026-01-14 04:02:30,689 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 23:03:04] 2026-01-14 04:02:30,689 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 23:03:04] 2026-01-14 04:02:30,698 | INFO     | fitting pss+swap vs Time
[2026-01-13 23:03:04] 2026-01-14 04:02:30,698 | INFO     | sum of square deviations: 509447167.3559321
[2026-01-13 23:03:04] 2026-01-14 04:02:30,699 | INFO     | sum of deviations: 20350075878.01695
[2026-01-13 23:03:04] 2026-01-14 04:02:30,699 | INFO     | mean x: 1768359718.7627118
[2026-01-13 23:03:04] 2026-01-14 04:02:30,699 | INFO     | mean y: 2499455.3220338984
[2026-01-13 23:03:04] 2026-01-14 04:02:30,699 | INFO     | intersect: -70635354207.15129
[2026-01-13 23:03:04] 2026-01-14 04:02:30,700 | INFO     | chi2: 1.6410195305052278
[2026-01-13 23:03:04] 2026-01-14 04:02:30,700 | INFO     | sum of square deviations: 447392568.0353992
[2026-01-13 23:03:04] 2026-01-14 04:02:30,700 | INFO     | sum of deviations: 19271589245.327427
[2026-01-13 23:03:04] 2026-01-14 04:02:30,701 | INFO     | mean x: 1768359566.2654867
[2026-01-13 23:03:04] 2026-01-14 04:02:30,701 | INFO     | mean y: 2496804.9557522126
[2026-01-13 23:03:04] 2026-01-14 04:02:30,701 | INFO     | intersect: -76170201701.778
[2026-01-13 23:03:04] 2026-01-14 04:02:30,701 | INFO     | chi2: 1.6437115535297866
[2026-01-13 23:03:04] 2026-01-14 04:02:30,701 | INFO     | current chi2=1.6437115535297866 (change=-0.1640457638995947 %)
[2026-01-13 23:03:04] 2026-01-14 04:02:30,701 | INFO     | right removable region: 112
[2026-01-13 23:03:04] 2026-01-14 04:02:30,701 | INFO     | sum of square deviations: 447380734.49557495
[2026-01-13 23:03:04] 2026-01-14 04:02:30,702 | INFO     | sum of deviations: -349082994.33628386
[2026-01-13 23:03:04] 2026-01-14 04:02:30,702 | INFO     | mean x: 1768359871.2743363
[2026-01-13 23:03:04] 2026-01-14 04:02:30,702 | INFO     | mean y: 2549542.849557522
[2026-01-13 23:03:04] 2026-01-14 04:02:30,702 | INFO     | intersect: 1382368366.797321
[2026-01-13 23:03:04] 2026-01-14 04:02:30,703 | INFO     | chi2: 0.006148472631841134
[2026-01-13 23:03:04] 2026-01-14 04:02:30,703 | INFO     | current chi2=0.006148472631841134 (change=99.62532605386188 %)
[2026-01-13 23:03:04] 2026-01-14 04:02:30,703 | INFO     | sum of square deviations: 390577106.66666734
[2026-01-13 23:03:04] 2026-01-14 04:02:30,704 | INFO     | sum of deviations: -269171247.7777778
[2026-01-13 23:03:04] 2026-01-14 04:02:30,704 | INFO     | mean x: 1768360023.7777777
[2026-01-13 23:03:04] 2026-01-14 04:02:30,704 | INFO     | mean y: 2549293.342592593
[2026-01-13 23:03:04] 2026-01-14 04:02:30,704 | INFO     | intersect: 1221237398.702628
[2026-01-13 23:03:04] 2026-01-14 04:02:30,704 | INFO     | chi2: 0.005244966168189028
[2026-01-13 23:03:04] 2026-01-14 04:02:30,704 | INFO     | current chi2=0.005244966168189028 (change=14.694811504455785 %)
[2026-01-13 23:03:04] 2026-01-14 04:02:30,704 | INFO     | left removable region: 20
[2026-01-13 23:03:04] 2026-01-14 04:02:30,704 | INFO     | sum of square deviations: 241423625.0760872
[2026-01-13 23:03:04] 2026-01-14 04:02:30,705 | INFO     | sum of deviations: 989059730.8695656
[2026-01-13 23:03:04] 2026-01-14 04:02:30,705 | INFO     | mean x: 1768360145.7934783
[2026-01-13 23:03:04] 2026-01-14 04:02:30,705 | INFO     | mean y: 2543716.782608696
[2026-01-13 23:03:04] 2026-01-14 04:02:30,705 | INFO     | intersect: -7242040608.085114
[2026-01-13 23:03:04] 2026-01-14 04:02:30,705 | INFO     | chi2: 0.00011241055897237917
[2026-01-13 23:03:04] 2026-01-14 04:02:30,706 | INFO     | current memory leak: 4.10 B/s (using 92 data points, chi2=0.00)
[2026-01-13 23:03:04] 2026-01-14 04:02:30,706 | INFO     | could have reported an average CPU frequency of 2717 MHz (7 samples)
[2026-01-13 23:03:04] 2026-01-14 04:02:30,706 | INFO     | ..............................
[2026-01-13 23:03:04] 2026-01-14 04:02:30,707 | INFO     | . Timing measurements:
[2026-01-13 23:03:04] 2026-01-14 04:02:30,707 | INFO     | . get job = 0 s
[2026-01-13 23:03:04] 2026-01-14 04:02:30,707 | INFO     | . initial setup = 3 s
[2026-01-13 23:03:04] 2026-01-14 04:02:30,707 | INFO     | . payload setup = 22 s
[2026-01-13 23:03:04] 2026-01-14 04:02:30,707 | INFO     | . stage-in = 0 s
[2026-01-13 23:03:04] 2026-01-14 04:02:30,707 | INFO     | . payload execution = 7203 s
[2026-01-13 23:03:04] 2026-01-14 04:02:30,707 | INFO     | . stage-out = 1 s
[2026-01-13 23:03:04] 2026-01-14 04:02:30,707 | INFO     | . log creation = 0 s
[2026-01-13 23:03:04] 2026-01-14 04:02:30,707 | INFO     | ..............................
[2026-01-13 23:03:04] 2026-01-14 04:02:30,822 | INFO     | 
[2026-01-13 23:03:04] 2026-01-14 04:02:30,823 | INFO     | job summary report
[2026-01-13 23:03:04] 2026-01-14 04:02:30,823 | INFO     | --------------------------------------------------
[2026-01-13 23:03:04] 2026-01-14 04:02:30,823 | INFO     | PanDA job id: 6969265635
[2026-01-13 23:03:04] 2026-01-14 04:02:30,823 | INFO     | task id: 48215263
[2026-01-13 23:03:04] 2026-01-14 04:02:30,823 | INFO     | errors: (none)
[2026-01-13 23:03:04] 2026-01-14 04:02:30,823 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 23:03:04] 2026-01-14 04:02:30,823 | INFO     | pilot state: finished 
[2026-01-13 23:03:04] 2026-01-14 04:02:30,823 | INFO     | transexitcode: 0
[2026-01-13 23:03:04] 2026-01-14 04:02:30,823 | INFO     | exeerrorcode: 0
[2026-01-13 23:03:04] 2026-01-14 04:02:30,823 | INFO     | exeerrordiag: 
[2026-01-13 23:03:04] 2026-01-14 04:02:30,823 | INFO     | exitcode: 0
[2026-01-13 23:03:04] 2026-01-14 04:02:30,823 | INFO     | exitmsg: OK
[2026-01-13 23:03:04] 2026-01-14 04:02:30,823 | INFO     | cpuconsumptiontime: 26299 s
[2026-01-13 23:03:04] 2026-01-14 04:02:30,823 | INFO     | nevents: 400
[2026-01-13 23:03:04] 2026-01-14 04:02:30,824 | INFO     | neventsw: 0
[2026-01-13 23:03:04] 2026-01-14 04:02:30,824 | INFO     | pid: 877664
[2026-01-13 23:03:04] 2026-01-14 04:02:30,824 | INFO     | pgrp: 877664
[2026-01-13 23:03:04] 2026-01-14 04:02:30,824 | INFO     | corecount: 8
[2026-01-13 23:03:04] 2026-01-14 04:02:30,824 | INFO     | event service: False
[2026-01-13 23:03:04] 2026-01-14 04:02:30,824 | INFO     | sizes: {0: 2283774, 1: 2283973, 8: 2284235, 12: 2284263, 7229: 2311891, 7230: 2311890, 7231: 2321072, 7234: 2321128, 7244: 2321322}
[2026-01-13 23:03:04] 2026-01-14 04:02:30,824 | INFO     | --------------------------------------------------
[2026-01-13 23:03:04] 2026-01-14 04:02:30,824 | INFO     | 
[2026-01-13 23:03:04] 2026-01-14 04:02:30,824 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-13 23:03:04] 2026-01-14 04:02:30,853 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 23:03:04] 2026-01-14 04:02:30,854 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 23:03:04] 2026-01-14 04:02:30,854 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 23:03:04] 2026-01-14 04:02:30,855 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 23:03:04] 2026-01-14 04:02:30,855 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 23:03:04] 2026-01-14 04:02:30,855 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 23:03:04] 2026-01-14 04:02:30,856 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 23:03:04] 2026-01-14 04:02:30,856 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 23:03:04] 2026-01-14 04:02:30,856 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 23:03:04] 2026-01-14 04:02:30,856 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 23:03:04] 2026-01-14 04:02:30,856 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 23:03:04] 2026-01-14 04:02:30,856 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 23:03:04] 2026-01-14 04:02:30,856 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 23:03:04] 2026-01-14 04:02:30,857 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 23:03:04] 2026-01-14 04:02:30,857 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 23:03:04] 2026-01-14 04:02:30,857 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 23:03:04] 2026-01-14 04:02:30,857 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 23:03:04] 2026-01-14 04:02:30,857 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 23:03:04] 2026-01-14 04:02:30,857 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 23:03:04] 2026-01-14 04:02:30,858 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 23:03:04] 2026-01-14 04:02:30,858 | INFO     | job 6969265635 has completed (purged errors)
[2026-01-13 23:03:04] 2026-01-14 04:02:30,858 | INFO     | overall cleanup function is called
[2026-01-13 23:03:04] 2026-01-14 04:02:31,869 | INFO     | --- collectZombieJob: --- 10, [877664]
[2026-01-13 23:03:04] 2026-01-14 04:02:31,870 | INFO     | zombie collector waiting for pid 877664
[2026-01-13 23:03:04] 2026-01-14 04:02:31,870 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 23:03:04] 2026-01-14 04:02:31,870 | INFO     | collected zombie processes
[2026-01-13 23:03:04] 2026-01-14 04:02:31,870 | INFO     | will attempt to kill all subprocesses of pid=877664
[2026-01-13 23:03:04] 2026-01-14 04:02:32,242 | INFO     | process IDs to be killed: [877664] (in reverse order)
[2026-01-13 23:03:04] 2026-01-14 04:02:32,395 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 23:03:04] 2026-01-14 04:02:32,396 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 23:03:04] 2026-01-14 04:02:32,408 | INFO     | did not find any defunct processes belonging to 877664
[2026-01-13 23:03:04] 2026-01-14 04:02:32,419 | INFO     | did not find any defunct processes belonging to 877664
[2026-01-13 23:03:04] 2026-01-14 04:02:32,420 | INFO     | ready for new job
[2026-01-13 23:03:04] 2026-01-14 04:02:32,420 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 23:03:04] 2026-01-14 04:02:32,421 | INFO     | ***************************************
[2026-01-13 23:03:04] 2026-01-14 04:02:32,422 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 23:03:04] 2026-01-14 04:02:32,422 | INFO     | ***************************************
[2026-01-13 23:03:04] 2026-01-14 04:02:32,424 | INFO     | 
[2026-01-13 23:03:04] 2026-01-14 04:02:32,430 | INFO     | architecture information:
[2026-01-13 23:03:04] 2026-01-14 04:02:32,430 | INFO     | executing command: cat /etc/os-release
[2026-01-13 23:03:04] 2026-01-14 04:02:32,456 | INFO     | cat /etc/os-release:
[2026-01-13 23:03:04] NAME="CentOS Linux"
[2026-01-13 23:03:04] VERSION="7 (Core)"
[2026-01-13 23:03:04] ID="centos"
[2026-01-13 23:03:04] ID_LIKE="rhel fedora"
[2026-01-13 23:03:04] VERSION_ID="7"
[2026-01-13 23:03:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 23:03:04] ANSI_COLOR="0;31"
[2026-01-13 23:03:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 23:03:04] HOME_URL="https://www.centos.org/"
[2026-01-13 23:03:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 23:03:04] 
[2026-01-13 23:03:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 23:03:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 23:03:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 23:03:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 23:03:04] 
[2026-01-13 23:03:04] 2026-01-14 04:02:32,456 | INFO     | ***************************************
[2026-01-13 23:03:04] 2026-01-14 04:02:32,962 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-13 23:03:04] 2026-01-14 04:02:33,056 | INFO     | sufficient remaining disk space (123635499008 B)
[2026-01-13 23:03:04] 2026-01-14 04:02:33,056 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 23:03:04] 2026-01-14 04:02:33,056 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 23:03:04] 2026-01-14 04:02:33,056 | INFO     | update_server=False
[2026-01-13 23:03:04] 2026-01-14 04:02:33,057 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 23:03:04] 2026-01-14 04:02:33,307 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 23:03:04] 2026-01-14 04:02:33,413 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-13 23:03:04] 2026-01-14 04:02:33,414 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-13 23:03:04] 2026-01-14 04:02:33,414 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 23:03:04] 2026-01-14 04:02:33,414 | INFO     | will abort loop
[2026-01-13 23:03:04] 2026-01-14 04:02:33,999 | INFO     | all data control threads have been joined
[2026-01-13 23:03:04] 2026-01-14 04:02:34,063 | INFO     | [job] retrieve thread has finished
[2026-01-13 23:03:04] 2026-01-14 04:02:34,420 | INFO     | [job] job monitor thread has finished
[2026-01-13 23:03:04] 2026-01-14 04:02:34,504 | INFO     | all payload control threads have been joined
[2026-01-13 23:03:04] 2026-01-14 04:02:34,553 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 23:03:04] 2026-01-14 04:02:34,563 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 23:03:04] 2026-01-14 04:02:34,614 | INFO     | [payload] failed_post thread has finished
[2026-01-13 23:03:04] 2026-01-14 04:02:34,640 | INFO     | all job control threads have been joined
[2026-01-13 23:03:04] 2026-01-14 04:02:34,818 | INFO     | [payload] validate_post thread has finished
[2026-01-13 23:03:04] 2026-01-14 04:02:35,017 | INFO     | [data] control thread has finished
[2026-01-13 23:03:04] 2026-01-14 04:02:35,052 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 23:03:04] 2026-01-14 04:02:35,151 | INFO     | [job] validate thread has finished
[2026-01-13 23:03:04] 2026-01-14 04:02:35,314 | INFO     | [data] copytool_out thread has finished
[2026-01-13 23:03:04] 2026-01-14 04:02:35,511 | INFO     | [payload] control thread has finished
[2026-01-13 23:03:04] 2026-01-14 04:02:35,555 | INFO     | [data] copytool_in thread has finished
[2026-01-13 23:03:04] 2026-01-14 04:02:35,641 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 23:03:04] 2026-01-14 04:02:35,646 | INFO     | [job] control thread has finished
[2026-01-13 23:03:04] 2026-01-14 04:02:35,835 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 23:03:04] 2026-01-14 04:02:36,509 | INFO     | [monitor] cgroup control has ended
[2026-01-13 23:03:04] 2026-01-14 04:02:36,842 | INFO     | [job] queue monitor thread has finished
[2026-01-13 23:03:04] 2026-01-14 04:02:39,651 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 23:03:04] 2026-01-14 04:02:43,369 | INFO     | job.realtimelogging is not enabled
[2026-01-13 23:03:04] 2026-01-14 04:02:44,375 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 23:03:04] 2026-01-14 04:02:44,846 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140008837494592)>', '<ExcThread(monitor, started 140008459585280)>']
[2026-01-13 23:03:04] 2026-01-14 04:02:49,879 | INFO     | all workflow threads have been joined
[2026-01-13 23:03:04] 2026-01-14 04:02:49,879 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 23:03:04] 2026-01-14 04:02:49,879 | INFO     | traces error code: 0
[2026-01-13 23:03:04] 2026-01-14 04:02:49,880 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 23:03:04] 2026-01-14 04:03:03,128 | INFO     | PID=869022 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-13 23:03:04] 2026-01-14 04:03:03,128 | INFO     | .. there are 17 such processes running
[2026-01-13 23:03:04] 2026-01-14 04:03:03,149 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 23:03:04] 2026-01-14 04:03:03,150 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 23:03:04] 2026-01-14 04:03:03,150 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 23:03:04] 2026-01-14 04:03:03,150 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 23:03:04] 2026-01-14 04:03:03,150 | INFO     | [monitor] control thread has ended
[2026-01-13 23:03:04] 2026-01-14 04:03:04,058 [wrapper] ==== pilot stdout END ====
[2026-01-13 23:03:04] 2026-01-14 04:03:04,073 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 23:03:04] 2026-01-14 04:03:04,075 [wrapper] pilotpid: 869022
[2026-01-13 23:03:04] 2026-01-14 04:03:04,077 [wrapper] Pilot exit status: 0
[2026-01-13 23:03:04] 2026-01-14 04:03:04,113 [wrapper] pandaids: 6969265635
[2026-01-13 23:03:04] 2026-01-14 04:03:04,295 [wrapper] cleanup supervisor_pilot 1257271 869023
[2026-01-13 23:03:04] 2026-01-14 04:03:04,337 [wrapper] Test setup, not cleaning
[2026-01-13 23:03:04] 2026-01-14 04:03:04,419 [wrapper] apfmon messages muted
[2026-01-13 23:03:04] 2026-01-14 04:03:04,435 [wrapper] ==== wrapper stdout END ====
[2026-01-13 23:03:04] 2026-01-14 04:03:04,458 [wrapper] ==== wrapper stderr END ====
[2026-01-13 23:03:04]  *** Error codes and diagnostics ***
[2026-01-13 23:03:04]     "exeErrorCode": 0,
[2026-01-13 23:03:04]     "exeErrorDiag": "",
[2026-01-13 23:03:04]     "pilotErrorCode": 0,
[2026-01-13 23:03:04]     "pilotErrorDiag": "",
[2026-01-13 23:03:04]  *** Listing of results directory ***
[2026-01-13 23:03:05] total 736128
[2026-01-13 23:03:05] -rwx------. 1 boincer umatlas     36322 Jan 13 17:01 runpilot2-wrapper.sh
[2026-01-13 23:03:05] -rw-r--r--. 1 boincer umatlas    579449 Jan 13 17:12 pilot3.tar.gz
[2026-01-13 23:03:05] -rw-r--r--. 1 boincer umatlas      5112 Jan 13 17:20 queuedata.json
[2026-01-13 23:03:05] -rw-r--r--. 1 boincer umatlas       100 Jan 13 21:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 23:03:05] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 13 21:00 run_atlas
[2026-01-13 23:03:05] -rw-r--r--. 1 boincer umatlas       105 Jan 13 21:00 job.xml
[2026-01-13 23:03:05] -rw-r--r--. 2 boincer umatlas 595282934 Jan 13 21:00 EVNT.32794306._000187.pool.root.1
[2026-01-13 23:03:05] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 21:00 start_atlas.sh
[2026-01-13 23:03:05] drwxrwx--x. 2 boincer umatlas      4096 Jan 13 21:00 shared
[2026-01-13 23:03:05] -rw-r--r--. 2 boincer umatlas    592393 Jan 13 21:00 input.tar.gz
[2026-01-13 23:03:05] -rw-r--r--. 1 boincer umatlas         0 Jan 13 21:00 boinc_lockfile
[2026-01-13 23:03:05] -rw-r--r--. 1 boincer umatlas      2505 Jan 13 21:00 pandaJob.out
[2026-01-13 23:03:05] -rw-------. 1 boincer umatlas        57 Jan 13 21:01 setup.sh.local
[2026-01-13 23:03:05] -rw-------. 1 boincer umatlas    997226 Jan 13 21:01 agis_schedconf.cvmfs.json
[2026-01-13 23:03:05] -rw-------. 1 boincer umatlas   1516246 Jan 13 21:01 agis_ddmendpoints.agis.ALL.json
[2026-01-13 23:03:05] drwx------. 5 boincer umatlas      4096 Jan 13 21:01 pilot3
[2026-01-13 23:03:05] -rw-------. 1 boincer umatlas 151906055 Jan 13 23:01 HITS.48215263._004659.pool.root.1
[2026-01-13 23:03:05] -rw-r--r--. 1 boincer umatlas       531 Jan 13 23:01 boinc_task_state.xml
[2026-01-13 23:03:05] -rw-------. 1 boincer umatlas      1045 Jan 13 23:02 memory_monitor_summary.json
[2026-01-13 23:03:05] -rw-------. 1 boincer umatlas    358790 Jan 13 23:02 log.48215263._004659.job.log.tgz.1
[2026-01-13 23:03:05] -rw-------. 1 boincer umatlas      7822 Jan 13 23:02 heartbeat.json
[2026-01-13 23:03:05] -rw-r--r--. 1 boincer umatlas      6859 Jan 13 23:02 init_data.xml
[2026-01-13 23:03:05] -rw-r--r--. 1 boincer umatlas      8192 Jan 13 23:03 boinc_mmap_file
[2026-01-13 23:03:05] -rw-r--r--. 1 boincer umatlas        27 Jan 13 23:03 wrapper_checkpoint.txt
[2026-01-13 23:03:05] -rw-------. 1 boincer umatlas        95 Jan 13 23:03 pilot_heartbeat.json
[2026-01-13 23:03:05] -rw-------. 1 boincer umatlas       822 Jan 13 23:03 pilotlog.txt
[2026-01-13 23:03:05] -rw-------. 1 boincer umatlas    981700 Jan 13 23:03 log.48215263._004659.job.log.1
[2026-01-13 23:03:05] -rw-------. 1 boincer umatlas       357 Jan 13 23:03 output.list
[2026-01-13 23:03:05] -rw-r--r--. 1 boincer umatlas       620 Jan 13 23:03 runtime_log
[2026-01-13 23:03:05] -rw-------. 1 boincer umatlas   1361920 Jan 13 23:03 result.tar.gz
[2026-01-13 23:03:05] -rw-r--r--. 1 boincer umatlas      9352 Jan 13 23:03 runtime_log.err
[2026-01-13 23:03:05] -rw-------. 1 boincer umatlas       654 Jan 13 23:03 9WjKDmOd1z8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmQ9oKDmuQV80m.diag
[2026-01-13 23:03:05] -rw-r--r--. 1 boincer umatlas     21431 Jan 13 23:03 stderr.txt
[2026-01-13 23:03:05] HITS file was successfully produced:
[2026-01-13 23:03:05] -rw-------. 1 boincer umatlas 151906055 Jan 13 23:01 shared/HITS.pool.root.1
[2026-01-13 23:03:05]  *** Contents of shared directory: ***
[2026-01-13 23:03:05] total 731616
[2026-01-13 23:03:05] -rw-r--r--. 2 boincer umatlas 595282934 Jan 13 21:00 ATLAS.root_0
[2026-01-13 23:03:05] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 21:00 start_atlas.sh
[2026-01-13 23:03:05] -rw-r--r--. 2 boincer umatlas    592393 Jan 13 21:00 input.tar.gz
[2026-01-13 23:03:05] -rw-------. 1 boincer umatlas 151906055 Jan 13 23:01 HITS.pool.root.1
[2026-01-13 23:03:05] -rw-------. 1 boincer umatlas   1361920 Jan 13 23:03 result.tar.gz
23:03:06 (864727): run_atlas exited; CPU time 26509.492794
23:03:06 (864727): called boinc_finish(0)

</stderr_txt>
]]>

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