Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:24:12 (3238368): wrapper (7.7.26015): starting
04:24:12 (3238368): wrapper: running run_atlas (--nthreads 3)
[2026-01-14 04:24:12] Arguments: --nthreads 3
[2026-01-14 04:24:12] Threads: 3
[2026-01-14 04:24:12] Checking for CVMFS
[2026-01-14 04:24:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 04:24:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 04:24:12] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 04:24:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 04:24:13] 2.9.2.0 3128188 283 61608 155116 1 56 20887746 36864000 0 130560 0 301263 99.992 13679 15850 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-14 04:24:13] CVMFS is ok
[2026-01-14 04:24:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 04:24:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 04:24:13] Further information can be found at the LHC@home message board.
[2026-01-14 04:24:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 04:24:13] Checking for apptainer binary...
[2026-01-14 04:24:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 04:24:13] Running /usr/bin/apptainer --version
[2026-01-14 04:24:13] apptainer version 1.4.1-1.1
[2026-01-14 04:24:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 04:24:13] thA327
[2026-01-14 04:24:13] apptainer works
[2026-01-14 04:24:13] Set ATHENA_PROC_NUMBER=3
[2026-01-14 04:24:13] Set ATHENA_CORE_NUMBER=3
[2026-01-14 04:24:13] Starting ATLAS job with PandaID=6969270406
[2026-01-14 04:24:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 05:21:28]  *** The last 200 lines of the pilot log: ***
[2026-01-14 05:21:28] 2026-01-14 04:20:23,282 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-14 05:21:28] 2026-01-14 04:20:23,282 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 05:21:28] 2026-01-14 04:20:23,282 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 05:21:28] 2026-01-14 04:20:23,282 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 05:21:28] 2026-01-14 04:20:23,282 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 05:21:28] 2026-01-14 04:20:23,297 | INFO     | all data control threads have been joined
[2026-01-14 05:21:28] 2026-01-14 04:20:23,407 | INFO     | all payload control threads have been joined
[2026-01-14 05:21:28] 2026-01-14 04:20:23,760 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-14 05:21:28] 2026-01-14 04:20:23,760 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-14 05:21:28] 2026-01-14 04:20:23,761 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 05:21:28] 2026-01-14 04:20:23,761 | INFO     | will abort loop
[2026-01-14 05:21:28] 2026-01-14 04:20:23,994 | INFO     | all job control threads have been joined
[2026-01-14 05:21:28] 2026-01-14 04:20:24,020 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 05:21:28] 2026-01-14 04:20:24,287 | INFO     | [job] retrieve thread has finished
[2026-01-14 05:21:28] 2026-01-14 04:20:24,287 | INFO     | [job] queue monitor thread has finished
[2026-01-14 05:21:28] 2026-01-14 04:20:24,302 | INFO     | [data] control thread has finished
[2026-01-14 05:21:28] 2026-01-14 04:20:24,413 | INFO     | [payload] control thread has finished
[2026-01-14 05:21:28] 2026-01-14 04:20:24,704 | INFO     | [payload] validate_post thread has finished
[2026-01-14 05:21:28] 2026-01-14 04:20:24,766 | INFO     | [job] job monitor thread has finished
[2026-01-14 05:21:28] 2026-01-14 04:20:24,993 | INFO     | [data] copytool_in thread has finished
[2026-01-14 05:21:28] 2026-01-14 04:20:24,999 | INFO     | [job] control thread has finished
[2026-01-14 05:21:28] 2026-01-14 04:20:25,474 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 05:21:28] 2026-01-14 04:20:25,500 | INFO     | [job] validate thread has finished
[2026-01-14 05:21:28] 2026-01-14 04:20:25,624 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 05:21:28] 2026-01-14 04:20:25,675 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 05:21:28] 2026-01-14 04:20:25,688 | INFO     | [payload] failed_post thread has finished
[2026-01-14 05:21:28] 2026-01-14 04:20:25,828 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 05:21:28] 2026-01-14 04:20:26,026 | INFO     | [data] copytool_out thread has finished
[2026-01-14 05:21:28] 2026-01-14 04:20:29,835 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 05:21:28] 2026-01-14 04:20:33,440 | INFO     | job.realtimelogging is not enabled
[2026-01-14 05:21:28] 2026-01-14 04:20:34,445 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 05:21:28] 2026-01-14 04:21:21,813 | INFO     | [monitor] cgroup control has ended
[2026-01-14 05:21:28] 2026-01-14 04:21:23,102 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139739710932800)>', '<ExcThread(monitor, started 139739227215616)>']
[2026-01-14 05:21:28] 2026-01-14 04:21:23,591 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 05:21:28] 2026-01-14 04:21:23,591 | INFO     | [monitor] control thread has ended
[2026-01-14 05:21:28] 2026-01-14 04:21:28,113 | INFO     | all workflow threads have been joined
[2026-01-14 05:21:28] 2026-01-14 04:21:28,114 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 05:21:28] 2026-01-14 04:21:28,114 | INFO     | traces error code: 0
[2026-01-14 05:21:28] 2026-01-14 04:21:28,114 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 05:21:28] 2026-01-14 04:21:28,164 [wrapper] ==== pilot stdout END ====
[2026-01-14 05:21:28] 2026-01-14 04:21:28,166 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 05:21:28] 2026-01-14 04:21:28,168 [wrapper] pilotpid: 3242093
[2026-01-14 05:21:28] 2026-01-14 04:21:28,171 [wrapper] Pilot exit status: 0
[2026-01-14 05:21:28] 2026-01-14 04:21:28,178 [wrapper] pandaids: 6969270406
[2026-01-14 05:21:28] 2026-01-14 04:21:28,194 [wrapper] cleanup supervisor_pilot 3257694 3242094
[2026-01-14 05:21:28] 2026-01-14 04:21:28,197 [wrapper] Test setup, not cleaning
[2026-01-14 05:21:28] 2026-01-14 04:21:28,199 [wrapper] apfmon messages muted
[2026-01-14 05:21:28] 2026-01-14 04:21:28,201 [wrapper] ==== wrapper stdout END ====
[2026-01-14 05:21:28] 2026-01-14 04:21:28,203 [wrapper] ==== wrapper stderr END ====
[2026-01-14 05:21:28]  *** Error codes and diagnostics ***
[2026-01-14 05:21:28]     "exeErrorCode": 0,
[2026-01-14 05:21:28]     "exeErrorDiag": "",
[2026-01-14 05:21:28]     "pilotErrorCode": 0,
[2026-01-14 05:21:28]     "pilotErrorDiag": "",
[2026-01-14 05:21:28]  *** Listing of results directory ***
[2026-01-14 05:21:28] total 735636
[2026-01-14 05:21:28] -rwx------ 1 boinc boinc     36322 Jan 13 22:59 runpilot2-wrapper.sh
[2026-01-14 05:21:28] -rw-r--r-- 1 boinc boinc    579449 Jan 13 23:12 pilot3.tar.gz
[2026-01-14 05:21:28] -rw-r--r-- 1 boinc boinc      5112 Jan 13 23:20 queuedata.json
[2026-01-14 05:21:28] -rw-r--r-- 1 boinc boinc       100 Jan 14 04:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 05:21:28] -rwxr-xr-x 1 boinc boinc      7986 Jan 14 04:24 run_atlas
[2026-01-14 05:21:28] -rw-r--r-- 1 boinc boinc       105 Jan 14 04:24 job.xml
[2026-01-14 05:21:28] -rw-r--r-- 2 boinc boinc 593720601 Jan 14 04:24 EVNT.32794306._000254.pool.root.1
[2026-01-14 05:21:28] -rw-r--r-- 2 boinc boinc    592395 Jan 14 04:24 input.tar.gz
[2026-01-14 05:21:28] -rw-r--r-- 2 boinc boinc     15847 Jan 14 04:24 start_atlas.sh
[2026-01-14 05:21:28] drwxrwx--x 2 boinc boinc      4096 Jan 14 04:24 shared
[2026-01-14 05:21:28] -rw-r--r-- 1 boinc boinc         0 Jan 14 04:24 boinc_setup_complete
[2026-01-14 05:21:28] -rw-r--r-- 1 boinc boinc      6446 Jan 14 04:24 init_data.xml
[2026-01-14 05:21:28] -rw-r--r-- 1 boinc boinc         0 Jan 14 04:24 boinc_lockfile
[2026-01-14 05:21:28] -rw-r--r-- 1 boinc boinc      2501 Jan 14 04:24 pandaJob.out
[2026-01-14 05:21:28] -rw------- 1 boinc boinc    997226 Jan 14 04:24 agis_schedconf.cvmfs.json
[2026-01-14 05:21:28] -rw------- 1 boinc boinc   1516246 Jan 14 04:24 agis_ddmendpoints.agis.ALL.json
[2026-01-14 05:21:28] drwx------ 5 boinc boinc      4096 Jan 14 04:24 pilot3
[2026-01-14 05:21:28] -rw------- 1 boinc boinc        95 Jan 14 05:19 pilot_heartbeat.json
[2026-01-14 05:21:28] -rw------- 1 boinc boinc 154208224 Jan 14 05:19 HITS.48215263._006326.pool.root.1
[2026-01-14 05:21:28] -rw-r--r-- 1 boinc boinc       529 Jan 14 05:20 boinc_task_state.xml
[2026-01-14 05:21:28] -rw------- 1 boinc boinc      1019 Jan 14 05:20 memory_monitor_summary.json
[2026-01-14 05:21:28] -rw------- 1 boinc boinc    214928 Jan 14 05:20 log.48215263._006326.job.log.tgz.1
[2026-01-14 05:21:28] -rw------- 1 boinc boinc      7739 Jan 14 05:20 heartbeat.json
[2026-01-14 05:21:28] -rw-r--r-- 1 boinc boinc        26 Jan 14 05:21 wrapper_checkpoint.txt
[2026-01-14 05:21:28] -rw-r--r-- 1 boinc boinc      8192 Jan 14 05:21 boinc_mmap_file
[2026-01-14 05:21:28] -rw------- 1 boinc boinc      4814 Jan 14 05:21 pilotlog.txt
[2026-01-14 05:21:28] -rw------- 1 boinc boinc    510674 Jan 14 05:21 log.48215263._006326.job.log.1
[2026-01-14 05:21:28] -rw------- 1 boinc boinc       357 Jan 14 05:21 output.list
[2026-01-14 05:21:28] -rw-r--r-- 1 boinc boinc       620 Jan 14 05:21 runtime_log
[2026-01-14 05:21:28] -rw------- 1 boinc boinc    747520 Jan 14 05:21 result.tar.gz
[2026-01-14 05:21:28] -rw------- 1 boinc boinc       656 Jan 14 05:21 zCTNDmWb1z8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmo2oKDmvL4E8m.diag
[2026-01-14 05:21:28] -rw-r--r-- 1 boinc boinc      8897 Jan 14 05:21 runtime_log.err
[2026-01-14 05:21:28] -rw-r--r-- 1 boinc boinc      7439 Jan 14 05:21 stderr.txt
[2026-01-14 05:21:28] HITS file was successfully produced:
[2026-01-14 05:21:28] -rw------- 1 boinc boinc 154208224 Jan 14 05:19 shared/HITS.pool.root.1
[2026-01-14 05:21:28]  *** Contents of shared directory: ***
[2026-01-14 05:21:28] total 731740
[2026-01-14 05:21:28] -rw-r--r-- 2 boinc boinc 593720601 Jan 14 04:24 ATLAS.root_0
[2026-01-14 05:21:28] -rw-r--r-- 2 boinc boinc    592395 Jan 14 04:24 input.tar.gz
[2026-01-14 05:21:28] -rw-r--r-- 2 boinc boinc     15847 Jan 14 04:24 start_atlas.sh
[2026-01-14 05:21:28] -rw------- 1 boinc boinc 154208224 Jan 14 05:19 HITS.pool.root.1
[2026-01-14 05:21:28] -rw------- 1 boinc boinc    747520 Jan 14 05:21 result.tar.gz
05:21:29 (3238368): run_atlas exited; CPU time 9468.441483
05:21:29 (3238368): called boinc_finish(0)

</stderr_txt>
]]>

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