Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:00:32 (2337839): wrapper (7.7.26015): starting
05:00:32 (2337839): wrapper: running run_atlas (--nthreads 4)
[2026-01-14 05:00:32] Arguments: --nthreads 4
[2026-01-14 05:00:32] Threads: 4
[2026-01-14 05:00:32] Checking for CVMFS
[2026-01-14 05:00:32] No cvmfs_config command found, will try listing directly
[2026-01-14 05:00:32] CVMFS is ok
[2026-01-14 05:00:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 05:00:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 05:00:32] Further information can be found at the LHC@home message board.
[2026-01-14 05:00:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 05:00:32] Checking for apptainer binary...
[2026-01-14 05:00:32] which: no apptainer in ((null))
[2026-01-14 05:00:32] apptainer is not installed, using version from CVMFS
[2026-01-14 05:00:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 05:00:32] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut32.grid.cesnet.cz
[2026-01-14 05:00:32] apptainer works
[2026-01-14 05:00:32] Set ATHENA_PROC_NUMBER=4
[2026-01-14 05:00:32] Set ATHENA_CORE_NUMBER=4
[2026-01-14 05:00:32] Starting ATLAS job with PandaID=6969270277
[2026-01-14 05:00:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 07:20:14]  *** The last 200 lines of the pilot log: ***
[2026-01-14 07:20:14] 2026-01-14 06:11:56,898 | INFO     | time since job start (7872s) is within the limit (349056.0s)
[2026-01-14 07:20:14] 2026-01-14 06:11:57,629 | INFO     | monitor loop #578: job 0:6969270277 is in state 'finished'
[2026-01-14 07:20:14] 2026-01-14 06:11:57,629 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 07:20:14] 2026-01-14 06:11:58,310 | INFO     | PID=2341844 has CPU usage=13.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-14 07:20:14] 2026-01-14 06:11:58,310 | INFO     | .. there are 3 such processes running
[2026-01-14 07:20:14] 2026-01-14 06:11:59,311 | INFO     | time since job start (7875s) is within the limit (349056.0s)
[2026-01-14 07:20:14] 2026-01-14 06:11:59,978 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-14 07:20:14] 2026-01-14 06:11:59,986 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2588.8091999999992
[2026-01-14 07:20:14] 2026-01-14 06:11:59,994 | INFO     | using path: /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6969270277/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 07:20:14] 2026-01-14 06:11:59,995 | INFO     | extracted standard info from prmon json
[2026-01-14 07:20:14] 2026-01-14 06:11:59,995 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 07:20:14] 2026-01-14 06:11:59,995 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 07:20:14] 2026-01-14 06:11:59,995 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 07:20:14] 2026-01-14 06:11:59,995 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 07:20:14] 2026-01-14 06:11:59,998 | INFO     | fitting pss+swap vs Time
[2026-01-14 07:20:14] 2026-01-14 06:11:59,999 | INFO     | sum of square deviations: 665612480.0
[2026-01-14 07:20:14] 2026-01-14 06:11:59,999 | INFO     | sum of deviations: 7170373527.000002
[2026-01-14 07:20:14] 2026-01-14 06:12:00,000 | INFO     | mean x: 1768367173.0
[2026-01-14 07:20:14] 2026-01-14 06:12:00,000 | INFO     | mean y: 2360220.6589147286
[2026-01-14 07:20:14] 2026-01-14 06:12:00,000 | INFO     | intersect: -19047542754.860764
[2026-01-14 07:20:14] 2026-01-14 06:12:00,000 | INFO     | chi2: 1.5087628333420269
[2026-01-14 07:20:14] 2026-01-14 06:12:00,001 | INFO     | sum of square deviations: 591173875.0
[2026-01-14 07:20:14] 2026-01-14 06:12:00,001 | INFO     | sum of deviations: 7018131404.500002
[2026-01-14 07:20:14] 2026-01-14 06:12:00,002 | INFO     | mean x: 1768367020.5
[2026-01-14 07:20:14] 2026-01-14 06:12:00,002 | INFO     | mean y: 2359908.669354839
[2026-01-14 07:20:14] 2026-01-14 06:12:00,002 | INFO     | intersect: -20990841323.799095
[2026-01-14 07:20:14] 2026-01-14 06:12:00,002 | INFO     | chi2: 1.5109684784123314
[2026-01-14 07:20:14] 2026-01-14 06:12:00,002 | INFO     | current chi2=1.5109684784123314 (change=-0.1461889848796741 %)
[2026-01-14 07:20:14] 2026-01-14 06:12:00,003 | INFO     | right removable region: 123
[2026-01-14 07:20:14] 2026-01-14 06:12:00,003 | INFO     | sum of square deviations: 591173875.0
[2026-01-14 07:20:14] 2026-01-14 06:12:00,004 | INFO     | sum of deviations: -9582800002.000002
[2026-01-14 07:20:14] 2026-01-14 06:12:00,004 | INFO     | mean x: 1768367325.5
[2026-01-14 07:20:14] 2026-01-14 06:12:00,004 | INFO     | mean y: 2393859.064516129
[2026-01-14 07:20:14] 2026-01-14 06:12:00,004 | INFO     | intersect: 28667243790.631836
[2026-01-14 07:20:14] 2026-01-14 06:12:00,004 | INFO     | chi2: 0.13612155941995788
[2026-01-14 07:20:14] 2026-01-14 06:12:00,005 | INFO     | current chi2=0.13612155941995788 (change=90.97793527174592 %)
[2026-01-14 07:20:14] 2026-01-14 06:12:00,005 | INFO     | sum of square deviations: 522502820.0
[2026-01-14 07:20:14] 2026-01-14 06:12:00,006 | INFO     | sum of deviations: -7817752436.0
[2026-01-14 07:20:14] 2026-01-14 06:12:00,006 | INFO     | mean x: 1768367478.0
[2026-01-14 07:20:14] 2026-01-14 06:12:00,006 | INFO     | mean y: 2389887.5714285714
[2026-01-14 07:20:14] 2026-01-14 06:12:00,006 | INFO     | intersect: 26460924903.47369
[2026-01-14 07:20:14] 2026-01-14 06:12:00,006 | INFO     | chi2: 0.1318282504959737
[2026-01-14 07:20:14] 2026-01-14 06:12:00,006 | INFO     | current chi2=0.1318282504959737 (change=3.154025668144611 %)
[2026-01-14 07:20:14] 2026-01-14 06:12:00,007 | INFO     | left removable region: 20
[2026-01-14 07:20:14] 2026-01-14 06:12:00,007 | INFO     | sum of square deviations: 338804492.0
[2026-01-14 07:20:14] 2026-01-14 06:12:00,007 | INFO     | sum of deviations: 68961476.00000018
[2026-01-14 07:20:14] 2026-01-14 06:12:00,008 | INFO     | mean x: 1768367600.0
[2026-01-14 07:20:14] 2026-01-14 06:12:00,008 | INFO     | mean y: 2371034.6213592235
[2026-01-14 07:20:14] 2026-01-14 06:12:00,008 | INFO     | intersect: -357568820.62287974
[2026-01-14 07:20:14] 2026-01-14 06:12:00,008 | INFO     | chi2: 0.0015156723921911069
[2026-01-14 07:20:14] 2026-01-14 06:12:00,008 | INFO     | current memory leak: 0.20 B/s (using 103 data points, chi2=0.00)
[2026-01-14 07:20:14] 2026-01-14 06:12:00,009 | INFO     | could have reported an average CPU frequency of 2586 MHz (8 samples)
[2026-01-14 07:20:14] 2026-01-14 06:12:00,009 | INFO     | ..............................
[2026-01-14 07:20:14] 2026-01-14 06:12:00,009 | INFO     | . Timing measurements:
[2026-01-14 07:20:14] 2026-01-14 06:12:00,009 | INFO     | . get job = 0 s
[2026-01-14 07:20:14] 2026-01-14 06:12:00,009 | INFO     | . initial setup = 1 s
[2026-01-14 07:20:14] 2026-01-14 06:12:00,010 | INFO     | . payload setup = 5 s
[2026-01-14 07:20:14] 2026-01-14 06:12:00,010 | INFO     | . stage-in = 0 s
[2026-01-14 07:20:14] 2026-01-14 06:12:00,010 | INFO     | . payload execution = 7844 s
[2026-01-14 07:20:14] 2026-01-14 06:12:00,010 | INFO     | . stage-out = 0 s
[2026-01-14 07:20:14] 2026-01-14 06:12:00,010 | INFO     | . log creation = 0 s
[2026-01-14 07:20:14] 2026-01-14 06:12:00,010 | INFO     | ..............................
[2026-01-14 07:20:14] 2026-01-14 06:12:00,116 | INFO     | 
[2026-01-14 07:20:14] 2026-01-14 06:12:00,116 | INFO     | job summary report
[2026-01-14 07:20:14] 2026-01-14 06:12:00,116 | INFO     | --------------------------------------------------
[2026-01-14 07:20:14] 2026-01-14 06:12:00,116 | INFO     | PanDA job id: 6969270277
[2026-01-14 07:20:14] 2026-01-14 06:12:00,116 | INFO     | task id: 48215263
[2026-01-14 07:20:14] 2026-01-14 06:12:00,117 | INFO     | errors: (none)
[2026-01-14 07:20:14] 2026-01-14 06:12:00,117 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 07:20:14] 2026-01-14 06:12:00,117 | INFO     | pilot state: finished 
[2026-01-14 07:20:14] 2026-01-14 06:12:00,117 | INFO     | transexitcode: 0
[2026-01-14 07:20:14] 2026-01-14 06:12:00,117 | INFO     | exeerrorcode: 0
[2026-01-14 07:20:14] 2026-01-14 06:12:00,117 | INFO     | exeerrordiag: 
[2026-01-14 07:20:14] 2026-01-14 06:12:00,117 | INFO     | exitcode: 0
[2026-01-14 07:20:14] 2026-01-14 06:12:00,117 | INFO     | exitmsg: OK
[2026-01-14 07:20:14] 2026-01-14 06:12:00,117 | INFO     | cpuconsumptiontime: 29743 s
[2026-01-14 07:20:14] 2026-01-14 06:12:00,118 | INFO     | nevents: 400
[2026-01-14 07:20:14] 2026-01-14 06:12:00,118 | INFO     | neventsw: 0
[2026-01-14 07:20:14] 2026-01-14 06:12:00,118 | INFO     | pid: 2348636
[2026-01-14 07:20:14] 2026-01-14 06:12:00,118 | INFO     | pgrp: 2348636
[2026-01-14 07:20:14] 2026-01-14 06:12:00,118 | INFO     | corecount: 4
[2026-01-14 07:20:14] 2026-01-14 06:12:00,118 | INFO     | event service: False
[2026-01-14 07:20:14] 2026-01-14 06:12:00,118 | INFO     | sizes: {0: 2283784, 1: 2283983, 5: 2284245, 11: 2284301, 7853: 2312047, 7854: 2321067, 7855: 2321251, 7861: 2321445}
[2026-01-14 07:20:14] 2026-01-14 06:12:00,118 | INFO     | --------------------------------------------------
[2026-01-14 07:20:14] 2026-01-14 06:12:00,119 | INFO     | 
[2026-01-14 07:20:14] 2026-01-14 06:12:00,119 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2026-01-14 07:20:14] 2026-01-14 06:12:00,138 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 07:20:14] 2026-01-14 06:12:00,138 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 07:20:14] 2026-01-14 06:12:00,139 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 07:20:14] 2026-01-14 06:12:00,139 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 07:20:14] 2026-01-14 06:12:00,139 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 07:20:14] 2026-01-14 06:12:00,139 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 07:20:14] 2026-01-14 06:12:00,139 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 07:20:14] 2026-01-14 06:12:00,139 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 07:20:14] 2026-01-14 06:12:00,139 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 07:20:14] 2026-01-14 06:12:00,139 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 07:20:14] 2026-01-14 06:12:00,140 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 07:20:14] 2026-01-14 06:12:00,140 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 07:20:14] 2026-01-14 06:12:00,140 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 07:20:14] 2026-01-14 06:12:00,140 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 07:20:14] 2026-01-14 06:12:00,140 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 07:20:14] 2026-01-14 06:12:00,140 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 07:20:14] 2026-01-14 06:12:00,140 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 07:20:14] 2026-01-14 06:12:00,140 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 07:20:14] 2026-01-14 06:12:00,140 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 07:20:14] 2026-01-14 06:12:00,140 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 07:20:14] 2026-01-14 06:12:00,141 | INFO     | job 6969270277 has completed (purged errors)
[2026-01-14 07:20:14] 2026-01-14 06:12:00,141 | INFO     | overall cleanup function is called
[2026-01-14 07:20:14] 2026-01-14 06:12:01,145 | INFO     | --- collectZombieJob: --- 10, [2348636]
[2026-01-14 07:20:14] 2026-01-14 06:12:01,145 | INFO     | zombie collector waiting for pid 2348636
[2026-01-14 07:20:14] 2026-01-14 06:12:01,146 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 07:20:14] 2026-01-14 06:12:01,146 | INFO     | collected zombie processes
[2026-01-14 07:20:14] 2026-01-14 06:12:01,146 | INFO     | will attempt to kill all subprocesses of pid=2348636
[2026-01-14 07:20:14] 2026-01-14 06:12:01,493 | INFO     | process IDs to be killed: [2348636] (in reverse order)
[2026-01-14 07:20:14] 2026-01-14 06:12:01,576 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 07:20:14] 2026-01-14 06:12:01,577 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 07:20:14] 2026-01-14 06:12:01,588 | INFO     | did not find any defunct processes belonging to 2348636
[2026-01-14 07:20:14] 2026-01-14 06:12:01,600 | INFO     | did not find any defunct processes belonging to 2348636
[2026-01-14 07:20:14] 2026-01-14 06:12:01,600 | INFO     | ready for new job
[2026-01-14 07:20:14] 2026-01-14 06:12:01,600 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 07:20:14] 2026-01-14 06:12:01,602 | INFO     | ***************************************
[2026-01-14 07:20:14] 2026-01-14 06:12:01,603 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 07:20:14] 2026-01-14 06:12:01,603 | INFO     | ***************************************
[2026-01-14 07:20:14] 2026-01-14 06:12:01,603 | INFO     | 
[2026-01-14 07:20:14] 2026-01-14 06:12:01,605 | INFO     | architecture information:
[2026-01-14 07:20:14] 2026-01-14 06:12:01,606 | INFO     | executing command: cat /etc/os-release
[2026-01-14 07:20:14] 2026-01-14 06:12:01,620 | INFO     | cat /etc/os-release:
[2026-01-14 07:20:14] NAME="CentOS Linux"
[2026-01-14 07:20:14] VERSION="7 (Core)"
[2026-01-14 07:20:14] ID="centos"
[2026-01-14 07:20:14] ID_LIKE="rhel fedora"
[2026-01-14 07:20:14] VERSION_ID="7"
[2026-01-14 07:20:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 07:20:14] ANSI_COLOR="0;31"
[2026-01-14 07:20:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 07:20:14] HOME_URL="https://www.centos.org/"
[2026-01-14 07:20:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 07:20:14] 
[2026-01-14 07:20:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 07:20:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 07:20:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 07:20:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 07:20:14] 
[2026-01-14 07:20:14] 2026-01-14 06:12:01,620 | INFO     | ***************************************
[2026-01-14 07:20:14] 2026-01-14 06:12:02,127 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2026-01-14 07:20:14] 2026-01-14 06:12:02,158 | INFO     | sufficient remaining disk space (1669716770816 B)
[2026-01-14 07:20:14] 2026-01-14 06:12:02,159 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 07:20:14] 2026-01-14 06:12:02,159 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 07:20:14] 2026-01-14 06:12:02,159 | INFO     | update_server=False
[2026-01-14 07:20:14] 2026-01-14 06:12:02,159 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 07:20:14] 2026-01-14 06:12:02,160 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 07:20:14] 2026-01-14 06:12:02,648 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-14 07:20:14] 2026-01-14 06:12:02,649 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-14 07:20:14] 2026-01-14 06:12:02,649 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 07:20:14] 2026-01-14 06:12:02,649 | INFO     | will abort loop
[2026-01-14 07:20:14] 2026-01-14 06:12:02,868 | INFO     | all data control threads have been joined
[2026-01-14 07:20:14] 2026-01-14 06:12:02,998 | INFO     | all payload control threads have been joined
[2026-01-14 07:20:14] 2026-01-14 06:12:03,160 | INFO     | [job] retrieve thread has finished
[2026-01-14 07:20:14] 2026-01-14 06:12:03,314 | INFO     | [payload] failed_post thread has finished
[2026-01-14 07:20:14] 2026-01-14 06:12:03,553 | INFO     | all job control threads have been joined
[2026-01-14 07:20:14] 2026-01-14 06:12:03,654 | INFO     | [job] job monitor thread has finished
[2026-01-14 07:20:14] 2026-01-14 06:12:03,684 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 07:20:14] 2026-01-14 06:12:03,729 | INFO     | [data] copytool_in thread has finished
[2026-01-14 07:20:14] 2026-01-14 06:12:03,873 | INFO     | [data] control thread has finished
[2026-01-14 07:20:14] 2026-01-14 06:12:03,881 | INFO     | [job] validate thread has finished
[2026-01-14 07:20:14] 2026-01-14 06:12:04,003 | INFO     | [payload] control thread has finished
[2026-01-14 07:20:14] 2026-01-14 06:12:04,165 | INFO     | [data] copytool_out thread has finished
[2026-01-14 07:20:14] 2026-01-14 06:12:04,174 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 07:20:14] 2026-01-14 06:12:04,318 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 07:20:14] 2026-01-14 06:12:04,484 | INFO     | [payload] validate_post thread has finished
[2026-01-14 07:20:14] 2026-01-14 06:12:04,555 | INFO     | [job] control thread has finished
[2026-01-14 07:20:14] 2026-01-14 06:12:04,626 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 07:20:14] 2026-01-14 06:12:05,123 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 07:20:14] 2026-01-14 06:12:06,128 | INFO     | [job] queue monitor thread has finished
[2026-01-14 07:20:14] 2026-01-14 06:12:08,631 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 07:20:14] 2026-01-14 06:12:13,196 | INFO     | job.realtimelogging is not enabled
[2026-01-14 07:20:14] 2026-01-14 06:12:14,201 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 07:20:14] 2026-01-14 06:12:32,812 | INFO     | PID=2341844 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-14 07:20:14] 2026-01-14 06:12:32,813 | INFO     | .. there are 3 such processes running
[2026-01-14 07:20:14] 2026-01-14 06:12:32,813 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 07:20:14] 2026-01-14 06:12:32,814 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 07:20:14] 2026-01-14 06:12:32,814 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 07:20:14] 2026-01-14 06:12:56,410 | INFO     | [monitor] cgroup control has ended
[2026-01-14 07:20:14] 2026-01-14 06:12:56,590 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22481739454272)>', '<ExcThread(monitor, started 22481492457216)>']
[2026-01-14 07:20:14] 2026-01-14 06:12:56,909 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 07:20:14] 2026-01-14 06:12:56,909 | INFO     | [monitor] control thread has ended
[2026-01-14 07:20:14] 2026-01-14 06:13:01,616 | INFO     | all workflow threads have been joined
[2026-01-14 07:20:14] 2026-01-14 06:13:01,616 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 07:20:14] 2026-01-14 06:13:01,617 | INFO     | traces error code: 0
[2026-01-14 07:20:14] 2026-01-14 06:13:01,617 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 07:20:14] 2026-01-14 06:13:01,730 [wrapper] ==== pilot stdout END ====
[2026-01-14 07:20:14] 2026-01-14 06:13:01,732 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 07:20:14] 2026-01-14 06:13:01,735 [wrapper] pilotpid: 2341844
[2026-01-14 07:20:14] 2026-01-14 06:13:01,737 [wrapper] Pilot exit status: 0
[2026-01-14 07:20:14] 2026-01-14 06:13:01,746 [wrapper] pandaids: 6969270277
[2026-01-14 07:20:14] 2026-01-14 06:13:01,803 [wrapper] cleanup supervisor_pilot 2475727 2341845
[2026-01-14 07:20:14] 2026-01-14 06:13:01,805 [wrapper] Test setup, not cleaning
[2026-01-14 07:20:14] 2026-01-14 06:13:01,809 [wrapper] apfmon messages muted
[2026-01-14 07:20:14] 2026-01-14 06:13:01,811 [wrapper] ==== wrapper stdout END ====
[2026-01-14 07:20:14] 2026-01-14 06:13:01,814 [wrapper] ==== wrapper stderr END ====
[2026-01-14 07:20:14]  *** Error codes and diagnostics ***
[2026-01-14 07:20:14]     "exeErrorCode": 0,
[2026-01-14 07:20:14]     "exeErrorDiag": "",
[2026-01-14 07:20:14]     "pilotErrorCode": 0,
[2026-01-14 07:20:14]     "pilotErrorDiag": "",
[2026-01-14 07:20:14]  *** Listing of results directory ***
[2026-01-14 07:20:14] total 737992
[2026-01-14 07:20:14] -rwx------ 1 boinc boinc     36322 Jan 13 22:59 runpilot2-wrapper.sh
[2026-01-14 07:20:14] -rw-r--r-- 1 boinc boinc    579449 Jan 13 23:12 pilot3.tar.gz
[2026-01-14 07:20:14] -rw-r--r-- 1 boinc boinc      5112 Jan 13 23:20 queuedata.json
[2026-01-14 07:20:14] -rw-r--r-- 1 boinc boinc       100 Jan 14 02:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 07:20:14] -rwxr-xr-x 1 boinc boinc      7986 Jan 14 02:30 run_atlas
[2026-01-14 07:20:14] -rw-r--r-- 1 boinc boinc       105 Jan 14 02:30 job.xml
[2026-01-14 07:20:14] -rw-r--r-- 2 boinc boinc 602063130 Jan 14 05:00 EVNT.32794306._000248.pool.root.1
[2026-01-14 07:20:14] -rw-r--r-- 1 boinc boinc      6424 Jan 14 05:00 init_data.xml
[2026-01-14 07:20:14] -rw-r--r-- 2 boinc boinc     15847 Jan 14 05:00 start_atlas.sh
[2026-01-14 07:20:14] drwxrwx--x 2 boinc boinc      4096 Jan 14 05:00 shared
[2026-01-14 07:20:14] -rw-r--r-- 2 boinc boinc    592391 Jan 14 05:00 input.tar.gz
[2026-01-14 07:20:14] -rw-r--r-- 1 boinc boinc         0 Jan 14 05:00 boinc_lockfile
[2026-01-14 07:20:14] -rw-r--r-- 1 boinc boinc      2504 Jan 14 05:00 pandaJob.out
[2026-01-14 07:20:14] -rw------- 1 boinc boinc    997226 Jan 14 05:00 agis_schedconf.cvmfs.json
[2026-01-14 07:20:14] -rw------- 1 boinc boinc   1516246 Jan 14 05:00 agis_ddmendpoints.agis.ALL.json
[2026-01-14 07:20:14] drwx------ 5 boinc boinc      4096 Jan 14 05:00 pilot3
[2026-01-14 07:20:14] -rw------- 1 boinc boinc 146780539 Jan 14 07:11 HITS.48215263._006197.pool.root.1
[2026-01-14 07:20:14] -rw-r--r-- 1 boinc boinc       528 Jan 14 07:11 boinc_task_state.xml
[2026-01-14 07:20:14] -rw------- 1 boinc boinc        95 Jan 14 07:11 pilot_heartbeat.json
[2026-01-14 07:20:14] -rw------- 1 boinc boinc      1043 Jan 14 07:11 memory_monitor_summary.json
[2026-01-14 07:20:14] -rw------- 1 boinc boinc    325352 Jan 14 07:11 log.48215263._006197.job.log.tgz.1
[2026-01-14 07:20:14] -rw------- 1 boinc boinc      7818 Jan 14 07:12 heartbeat.json
[2026-01-14 07:20:14] -rw------- 1 boinc boinc      5092 Jan 14 07:13 pilotlog.txt
[2026-01-14 07:20:14] -rw------- 1 boinc boinc   1140169 Jan 14 07:13 log.48215263._006197.job.log.1
[2026-01-14 07:20:14] -rw------- 1 boinc boinc       357 Jan 14 07:13 output.list
[2026-01-14 07:20:14] -rw-r--r-- 1 boinc boinc       620 Jan 14 07:13 runtime_log
[2026-01-14 07:20:14] -rw------- 1 boinc boinc   1484800 Jan 14 07:13 result.tar.gz
[2026-01-14 07:20:14] -rw-r--r-- 1 boinc boinc      9205 Jan 14 07:13 runtime_log.err
[2026-01-14 07:20:14] -rw------- 1 boinc boinc       662 Jan 14 07:13 EfqLDmWb1z8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDml1oKDmQneSjn.diag
[2026-01-14 07:20:14] -rw-r--r-- 1 boinc boinc      8192 Jan 14 07:20 boinc_mmap_file
[2026-01-14 07:20:14] -rw-r--r-- 1 boinc boinc     21137 Jan 14 07:20 stderr.txt
[2026-01-14 07:20:14] -rw-r--r-- 1 boinc boinc        27 Jan 14 07:20 wrapper_checkpoint.txt
[2026-01-14 07:20:14] HITS file was successfully produced:
[2026-01-14 07:20:14] -rw------- 1 boinc boinc 146780539 Jan 14 07:11 shared/HITS.pool.root.1
[2026-01-14 07:20:14]  *** Contents of shared directory: ***
[2026-01-14 07:20:14] total 733356
[2026-01-14 07:20:14] -rw-r--r-- 2 boinc boinc 602063130 Jan 14 05:00 ATLAS.root_0
[2026-01-14 07:20:14] -rw-r--r-- 2 boinc boinc     15847 Jan 14 05:00 start_atlas.sh
[2026-01-14 07:20:14] -rw-r--r-- 2 boinc boinc    592391 Jan 14 05:00 input.tar.gz
[2026-01-14 07:20:14] -rw------- 1 boinc boinc 146780539 Jan 14 07:11 HITS.pool.root.1
[2026-01-14 07:20:14] -rw------- 1 boinc boinc   1484800 Jan 14 07:13 result.tar.gz
07:20:16 (2337839): run_atlas exited; CPU time 30015.205360
07:20:16 (2337839): called boinc_finish(0)

</stderr_txt>
]]>

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