Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:18:48 (4800): wrapper (7.7.26015): starting
02:18:48 (4800): wrapper: running run_atlas (--nthreads 8)
[2026-01-14 02:18:48] Arguments: --nthreads 8
[2026-01-14 02:18:48] Threads: 8
[2026-01-14 02:18:48] Checking for CVMFS
[2026-01-14 02:18:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 02:18:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 02:18:53] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 02:18:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 02:18:54] 2.11.2.0 2467 41945 127484 155113 2 11 24050845 25165824 96 130560 0 18912825 99.811 12166835 2940 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-14 02:18:54] CVMFS is ok
[2026-01-14 02:18:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 02:18:54] Checking for apptainer binary...
[2026-01-14 02:18:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 02:18:54] Running /usr/bin/apptainer --version
[2026-01-14 02:18:54] apptainer version 1.3.2-1.el7
[2026-01-14 02:18:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 02:19:21] cg-vwn487.simple-grid.lan
[2026-01-14 02:19:21] apptainer works
[2026-01-14 02:19:21] Set ATHENA_PROC_NUMBER=8
[2026-01-14 02:19:21] Set ATHENA_CORE_NUMBER=8
[2026-01-14 02:19:21] Starting ATLAS job with PandaID=6969264153
[2026-01-14 02:19:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 05:09:19]  *** The last 200 lines of the pilot log: ***
[2026-01-14 05:09:19] 2026-01-14 04:08:06,294 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2026-01-14 05:09:19] 2026-01-14 04:08:06,296 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6969264153/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 05:09:19] 2026-01-14 04:08:06,296 | INFO     | extracted standard info from prmon json
[2026-01-14 05:09:19] 2026-01-14 04:08:06,296 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 05:09:19] 2026-01-14 04:08:06,297 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 05:09:19] 2026-01-14 04:08:06,297 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 05:09:19] 2026-01-14 04:08:06,297 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 05:09:19] 2026-01-14 04:08:06,300 | INFO     | fitting pss+swap vs Time
[2026-01-14 05:09:19] 2026-01-14 04:08:06,301 | INFO     | sum of square deviations: 1067554900.0
[2026-01-14 05:09:19] 2026-01-14 04:08:06,302 | INFO     | sum of deviations: 49463802671.0
[2026-01-14 05:09:19] 2026-01-14 04:08:06,302 | INFO     | mean x: 1768358977.0
[2026-01-14 05:09:19] 2026-01-14 04:08:06,302 | INFO     | mean y: 2449202.0
[2026-01-14 05:09:19] 2026-01-14 04:08:06,302 | INFO     | intersect: -81932221782.9015
[2026-01-14 05:09:19] 2026-01-14 04:08:06,303 | INFO     | chi2: 7.965790214034149
[2026-01-14 05:09:19] 2026-01-14 04:08:06,303 | INFO     | sum of square deviations: 964976232.5
[2026-01-14 05:09:19] 2026-01-14 04:08:06,304 | INFO     | sum of deviations: 57882405472.999985
[2026-01-14 05:09:19] 2026-01-14 04:08:06,304 | INFO     | mean x: 1768358824.5
[2026-01-14 05:09:19] 2026-01-14 04:08:06,304 | INFO     | mean y: 2461314.794520548
[2026-01-14 05:09:19] 2026-01-14 04:08:06,304 | INFO     | intersect: -106069438752.92722
[2026-01-14 05:09:19] 2026-01-14 04:08:06,305 | INFO     | chi2: 7.304768091176465
[2026-01-14 05:09:19] 2026-01-14 04:08:06,305 | INFO     | current chi2=7.304768091176465 (change=8.298261755539253 %)
[2026-01-14 05:09:19] 2026-01-14 04:08:06,305 | INFO     | right removable region: 145
[2026-01-14 05:09:19] 2026-01-14 04:08:06,305 | INFO     | sum of square deviations: 964976232.5
[2026-01-14 05:09:19] 2026-01-14 04:08:06,306 | INFO     | sum of deviations: -3746329030.0000086
[2026-01-14 05:09:19] 2026-01-14 04:08:06,306 | INFO     | mean x: 1768359129.5
[2026-01-14 05:09:19] 2026-01-14 04:08:06,306 | INFO     | mean y: 2528244.506849315
[2026-01-14 05:09:19] 2026-01-14 04:08:06,307 | INFO     | intersect: 6867832196.240598
[2026-01-14 05:09:19] 2026-01-14 04:08:06,307 | INFO     | chi2: 2.636048561856146
[2026-01-14 05:09:19] 2026-01-14 04:08:06,307 | INFO     | current chi2=2.636048561856146 (change=66.90788369982492 %)
[2026-01-14 05:09:19] 2026-01-14 04:08:06,317 | INFO     | sum of square deviations: 869188390.0
[2026-01-14 05:09:19] 2026-01-14 04:08:06,318 | INFO     | sum of deviations: -31506742108.999996
[2026-01-14 05:09:19] 2026-01-14 04:08:06,318 | INFO     | mean x: 1768359282.0
[2026-01-14 05:09:19] 2026-01-14 04:08:06,318 | INFO     | mean y: 2572039.070921986
[2026-01-14 05:09:19] 2026-01-14 04:08:06,318 | INFO     | intersect: 64102875834.00587
[2026-01-14 05:09:19] 2026-01-14 04:08:06,318 | INFO     | chi2: 0.9691751351902964
[2026-01-14 05:09:19] 2026-01-14 04:08:06,318 | INFO     | current chi2=0.9691751351902964 (change=63.23379056006989 %)
[2026-01-14 05:09:19] 2026-01-14 04:08:06,319 | INFO     | sum of square deviations: 779958810.0
[2026-01-14 05:09:19] 2026-01-14 04:08:06,319 | INFO     | sum of deviations: -32667366630.5
[2026-01-14 05:09:19] 2026-01-14 04:08:06,320 | INFO     | mean x: 1768359434.5
[2026-01-14 05:09:19] 2026-01-14 04:08:06,320 | INFO     | mean y: 2573910.3161764704
[2026-01-14 05:09:19] 2026-01-14 04:08:06,320 | INFO     | intersect: 74067569703.25446
[2026-01-14 05:09:19] 2026-01-14 04:08:06,320 | INFO     | chi2: 0.928757052373251
[2026-01-14 05:09:19] 2026-01-14 04:08:06,320 | INFO     | current chi2=0.928757052373251 (change=4.170359035171631 %)
[2026-01-14 05:09:19] 2026-01-14 04:08:06,320 | INFO     | left removable region: 30
[2026-01-14 05:09:19] 2026-01-14 04:08:06,321 | INFO     | sum of square deviations: 471562330.0
[2026-01-14 05:09:19] 2026-01-14 04:08:06,321 | INFO     | sum of deviations: -11145581816.0
[2026-01-14 05:09:19] 2026-01-14 04:08:06,322 | INFO     | mean x: 1768359709.0
[2026-01-14 05:09:19] 2026-01-14 04:08:06,322 | INFO     | mean y: 2568031.3217391307
[2026-01-14 05:09:19] 2026-01-14 04:08:06,322 | INFO     | intersect: 41798522803.14893
[2026-01-14 05:09:19] 2026-01-14 04:08:06,322 | INFO     | chi2: 0.10388844040622633
[2026-01-14 05:09:19] 2026-01-14 04:08:06,322 | INFO     | current memory leak: -23.64 B/s (using 115 data points, chi2=0.10)
[2026-01-14 05:09:19] 2026-01-14 04:08:06,323 | INFO     | could have reported an average CPU frequency of 2249 MHz (8 samples)
[2026-01-14 05:09:19] 2026-01-14 04:08:06,323 | INFO     | ..............................
[2026-01-14 05:09:19] 2026-01-14 04:08:06,323 | INFO     | . Timing measurements:
[2026-01-14 05:09:19] 2026-01-14 04:08:06,323 | INFO     | . get job = 0 s
[2026-01-14 05:09:19] 2026-01-14 04:08:06,323 | INFO     | . initial setup = 11 s
[2026-01-14 05:09:19] 2026-01-14 04:08:06,323 | INFO     | . payload setup = 161 s
[2026-01-14 05:09:19] 2026-01-14 04:08:06,324 | INFO     | . stage-in = 0 s
[2026-01-14 05:09:19] 2026-01-14 04:08:06,324 | INFO     | . payload execution = 9340 s
[2026-01-14 05:09:19] 2026-01-14 04:08:06,324 | INFO     | . stage-out = 3 s
[2026-01-14 05:09:19] 2026-01-14 04:08:06,324 | INFO     | . log creation = 1 s
[2026-01-14 05:09:19] 2026-01-14 04:08:06,324 | INFO     | ..............................
[2026-01-14 05:09:19] 2026-01-14 04:08:06,458 | INFO     | 
[2026-01-14 05:09:19] 2026-01-14 04:08:06,459 | INFO     | job summary report
[2026-01-14 05:09:19] 2026-01-14 04:08:06,459 | INFO     | --------------------------------------------------
[2026-01-14 05:09:19] 2026-01-14 04:08:06,459 | INFO     | PanDA job id: 6969264153
[2026-01-14 05:09:19] 2026-01-14 04:08:06,459 | INFO     | task id: 48215263
[2026-01-14 05:09:19] 2026-01-14 04:08:06,459 | INFO     | errors: (none)
[2026-01-14 05:09:19] 2026-01-14 04:08:06,459 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 05:09:19] 2026-01-14 04:08:06,459 | INFO     | pilot state: finished 
[2026-01-14 05:09:19] 2026-01-14 04:08:06,459 | INFO     | transexitcode: 0
[2026-01-14 05:09:19] 2026-01-14 04:08:06,459 | INFO     | exeerrorcode: 0
[2026-01-14 05:09:19] 2026-01-14 04:08:06,459 | INFO     | exeerrordiag: 
[2026-01-14 05:09:19] 2026-01-14 04:08:06,460 | INFO     | exitcode: 0
[2026-01-14 05:09:19] 2026-01-14 04:08:06,460 | INFO     | exitmsg: OK
[2026-01-14 05:09:19] 2026-01-14 04:08:06,460 | INFO     | cpuconsumptiontime: 33102 s
[2026-01-14 05:09:19] 2026-01-14 04:08:06,460 | INFO     | nevents: 400
[2026-01-14 05:09:19] 2026-01-14 04:08:06,460 | INFO     | neventsw: 0
[2026-01-14 05:09:19] 2026-01-14 04:08:06,460 | INFO     | pid: 15348
[2026-01-14 05:09:19] 2026-01-14 04:08:06,460 | INFO     | pgrp: 15348
[2026-01-14 05:09:19] 2026-01-14 04:08:06,460 | INFO     | corecount: 8
[2026-01-14 05:09:19] 2026-01-14 04:08:06,460 | INFO     | event service: False
[2026-01-14 05:09:19] 2026-01-14 04:08:06,460 | INFO     | sizes: {0: 2283718, 1: 2283973, 12: 2283973, 23: 2284001, 34: 2284029, 44: 2284057, 55: 2284213, 66: 2284241, 76: 2284269, 87: 2284325, 98: 2284353, 109: 2284951, 
[2026-01-14 05:09:19] 2026-01-14 04:08:06,461 | INFO     | --------------------------------------------------
[2026-01-14 05:09:19] 2026-01-14 04:08:06,461 | INFO     | 
[2026-01-14 05:09:19] 2026-01-14 04:08:06,461 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-01-14 05:09:19] 2026-01-14 04:08:07,007 | INFO     | time since job start (9855s) is within the limit (349056.0s)
[2026-01-14 05:09:19] 2026-01-14 04:08:07,075 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 05:09:19] 2026-01-14 04:08:07,075 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 05:09:19] 2026-01-14 04:08:07,075 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 05:09:19] 2026-01-14 04:08:07,076 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 05:09:19] 2026-01-14 04:08:07,076 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 05:09:19] 2026-01-14 04:08:07,076 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 05:09:19] 2026-01-14 04:08:07,076 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 05:09:19] 2026-01-14 04:08:07,076 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 05:09:19] 2026-01-14 04:08:07,076 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 05:09:19] 2026-01-14 04:08:07,076 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 05:09:19] 2026-01-14 04:08:07,076 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 05:09:19] 2026-01-14 04:08:07,076 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 05:09:19] 2026-01-14 04:08:07,077 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 05:09:19] 2026-01-14 04:08:07,077 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 05:09:19] 2026-01-14 04:08:07,077 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 05:09:19] 2026-01-14 04:08:07,077 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 05:09:19] 2026-01-14 04:08:07,077 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 05:09:19] 2026-01-14 04:08:07,077 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 05:09:19] 2026-01-14 04:08:07,077 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 05:09:19] 2026-01-14 04:08:07,077 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 05:09:19] 2026-01-14 04:08:07,077 | INFO     | job 6969264153 has completed (purged errors)
[2026-01-14 05:09:19] 2026-01-14 04:08:07,078 | INFO     | overall cleanup function is called
[2026-01-14 05:09:19] 2026-01-14 04:08:08,086 | INFO     | --- collectZombieJob: --- 10, [15348]
[2026-01-14 05:09:19] 2026-01-14 04:08:08,087 | INFO     | zombie collector waiting for pid 15348
[2026-01-14 05:09:19] 2026-01-14 04:08:08,087 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 05:09:19] 2026-01-14 04:08:08,087 | INFO     | collected zombie processes
[2026-01-14 05:09:19] 2026-01-14 04:08:08,087 | INFO     | will attempt to kill all subprocesses of pid=15348
[2026-01-14 05:09:19] 2026-01-14 04:08:08,166 | INFO     | process IDs to be killed: [15348] (in reverse order)
[2026-01-14 05:09:19] 2026-01-14 04:08:09,050 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 05:09:19] 2026-01-14 04:08:09,050 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 05:09:19] 2026-01-14 04:08:09,052 | INFO     | did not find any defunct processes belonging to 15348
[2026-01-14 05:09:19] 2026-01-14 04:08:09,059 | INFO     | did not find any defunct processes belonging to 15348
[2026-01-14 05:09:19] 2026-01-14 04:08:09,059 | INFO     | ready for new job
[2026-01-14 05:09:19] 2026-01-14 04:08:09,059 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 05:09:19] 2026-01-14 04:08:09,061 | INFO     | ***************************************
[2026-01-14 05:09:19] 2026-01-14 04:08:09,061 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 05:09:19] 2026-01-14 04:08:09,061 | INFO     | ***************************************
[2026-01-14 05:09:19] 2026-01-14 04:08:09,062 | INFO     | 
[2026-01-14 05:09:19] 2026-01-14 04:08:09,062 | INFO     | pilot is running in a VM
[2026-01-14 05:09:19] 2026-01-14 04:08:09,062 | INFO     | architecture information:
[2026-01-14 05:09:19] 2026-01-14 04:08:09,076 | INFO     | executing command: cat /etc/os-release
[2026-01-14 05:09:19] 2026-01-14 04:08:09,409 | INFO     | cat /etc/os-release:
[2026-01-14 05:09:19] NAME="CentOS Linux"
[2026-01-14 05:09:19] VERSION="7 (Core)"
[2026-01-14 05:09:19] ID="centos"
[2026-01-14 05:09:19] ID_LIKE="rhel fedora"
[2026-01-14 05:09:19] VERSION_ID="7"
[2026-01-14 05:09:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 05:09:19] ANSI_COLOR="0;31"
[2026-01-14 05:09:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 05:09:19] HOME_URL="https://www.centos.org/"
[2026-01-14 05:09:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 05:09:19] 
[2026-01-14 05:09:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 05:09:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 05:09:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 05:09:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 05:09:19] 
[2026-01-14 05:09:19] 2026-01-14 04:08:09,409 | INFO     | ***************************************
[2026-01-14 05:09:19] 2026-01-14 04:08:09,913 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-01-14 05:09:19] 2026-01-14 04:08:10,093 | INFO     | sufficient remaining disk space (494544093184 B)
[2026-01-14 05:09:19] 2026-01-14 04:08:10,094 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 05:09:19] 2026-01-14 04:08:10,094 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 05:09:19] 2026-01-14 04:08:10,094 | INFO     | update_server=False
[2026-01-14 05:09:19] 2026-01-14 04:08:10,094 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 05:09:19] 2026-01-14 04:08:10,094 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 05:09:19] 2026-01-14 04:08:10,096 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 05:09:19] 2026-01-14 04:08:10,096 | INFO     | aborting loop
[2026-01-14 05:09:19] 2026-01-14 04:08:10,098 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 05:09:19] 2026-01-14 04:08:10,518 | INFO     | all data control threads have been joined
[2026-01-14 05:09:19] 2026-01-14 04:08:10,700 | INFO     | all job control threads have been joined
[2026-01-14 05:09:19] 2026-01-14 04:08:11,067 | INFO     | all payload control threads have been joined
[2026-01-14 05:09:19] 2026-01-14 04:08:11,101 | INFO     | [job] retrieve thread has finished
[2026-01-14 05:09:19] 2026-01-14 04:08:11,102 | INFO     | [job] job monitor thread has finished
[2026-01-14 05:09:19] 2026-01-14 04:08:11,282 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 05:09:19] 2026-01-14 04:08:11,472 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 05:09:19] 2026-01-14 04:08:11,525 | INFO     | [data] control thread has finished
[2026-01-14 05:09:19] 2026-01-14 04:08:11,649 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 05:09:19] 2026-01-14 04:08:11,707 | INFO     | [job] control thread has finished
[2026-01-14 05:09:19] 2026-01-14 04:08:11,744 | INFO     | [payload] validate_post thread has finished
[2026-01-14 05:09:19] 2026-01-14 04:08:12,074 | INFO     | [payload] control thread has finished
[2026-01-14 05:09:19] 2026-01-14 04:08:12,102 | INFO     | [data] copytool_out thread has finished
[2026-01-14 05:09:19] 2026-01-14 04:08:12,131 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 05:09:19] 2026-01-14 04:08:12,223 | INFO     | [data] copytool_in thread has finished
[2026-01-14 05:09:19] 2026-01-14 04:08:12,327 | INFO     | [job] validate thread has finished
[2026-01-14 05:09:19] 2026-01-14 04:08:12,343 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 05:09:19] 2026-01-14 04:08:12,420 | INFO     | [payload] failed_post thread has finished
[2026-01-14 05:09:19] 2026-01-14 04:08:12,478 | INFO     | [job] queue monitor thread has finished
[2026-01-14 05:09:19] 2026-01-14 04:08:14,107 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 05:09:19] 2026-01-14 04:08:37,039 [wrapper] supervise_pilot (15 min periods counter: 12)
[2026-01-14 05:09:19] 2026-01-14 04:08:40,121 | INFO     | PID=8873 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-14 05:09:19] 2026-01-14 04:08:40,121 | INFO     | .. there are 2 such processes running
[2026-01-14 05:09:19] 2026-01-14 04:08:40,121 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 05:09:19] 2026-01-14 04:08:40,122 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 05:09:19] 2026-01-14 04:08:40,122 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 05:09:19] 2026-01-14 04:09:08,382 | INFO     | [monitor] cgroup control has ended
[2026-01-14 05:09:19] 2026-01-14 04:09:10,200 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140118974433088)>', '<ExcThread(monitor, started 140118358726400)>']
[2026-01-14 05:09:19] 2026-01-14 04:09:10,301 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 05:09:19] 2026-01-14 04:09:10,302 | INFO     | [monitor] control thread has ended
[2026-01-14 05:09:19] 2026-01-14 04:09:15,226 | INFO     | all workflow threads have been joined
[2026-01-14 05:09:19] 2026-01-14 04:09:15,227 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 05:09:19] 2026-01-14 04:09:15,227 | INFO     | traces error code: 0
[2026-01-14 05:09:19] 2026-01-14 04:09:15,227 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 05:09:19] 2026-01-14 04:09:15,561 [wrapper] ==== pilot stdout END ====
[2026-01-14 05:09:19] 2026-01-14 04:09:15,673 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 05:09:19] 2026-01-14 04:09:15,738 [wrapper] pilotpid: 8873
[2026-01-14 05:09:19] 2026-01-14 04:09:15,825 [wrapper] Pilot exit status: 0
[2026-01-14 05:09:19] 2026-01-14 04:09:16,316 [wrapper] pandaids: 6969264153
[2026-01-14 05:09:19] 2026-01-14 04:09:17,441 [wrapper] cleanup supervisor_pilot  1769 8874
[2026-01-14 05:09:19] 2026-01-14 04:09:17,546 [wrapper] Test setup, not cleaning
[2026-01-14 05:09:19] 2026-01-14 04:09:17,662 [wrapper] apfmon messages muted
[2026-01-14 05:09:19] 2026-01-14 04:09:17,755 [wrapper] ==== wrapper stdout END ====
[2026-01-14 05:09:19] 2026-01-14 04:09:17,857 [wrapper] ==== wrapper stderr END ====
[2026-01-14 05:09:19]  *** Error codes and diagnostics ***
[2026-01-14 05:09:19]     "exeErrorCode": 0,
[2026-01-14 05:09:19]     "exeErrorDiag": "",
[2026-01-14 05:09:19]     "pilotErrorCode": 0,
[2026-01-14 05:09:19]     "pilotErrorDiag": "",
[2026-01-14 05:09:19]  *** Listing of results directory ***
[2026-01-14 05:09:19] total 732096
[2026-01-14 05:09:19] -rwx------. 1 boinc boinc     36322 Jan 13 23:01 runpilot2-wrapper.sh
[2026-01-14 05:09:19] -rw-r--r--. 1 boinc boinc      5112 Jan 13 23:12 queuedata.json
[2026-01-14 05:09:19] -rw-r--r--. 1 boinc boinc    579449 Jan 13 23:12 pilot3.tar.gz
[2026-01-14 05:09:19] -rw-r--r--. 1 boinc boinc       100 Jan 14 02:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 05:09:19] -rwxr-xr-x. 1 boinc boinc      7986 Jan 14 02:18 run_atlas
[2026-01-14 05:09:19] -rw-r--r--. 1 boinc boinc       105 Jan 14 02:18 job.xml
[2026-01-14 05:09:19] -rw-r--r--. 1 boinc boinc      6390 Jan 14 02:18 init_data.xml
[2026-01-14 05:09:19] -rw-r--r--. 2 boinc boinc 593597642 Jan 14 02:18 EVNT.32794306._000170.pool.root.1
[2026-01-14 05:09:19] -rw-r--r--. 2 boinc boinc     15847 Jan 14 02:18 start_atlas.sh
[2026-01-14 05:09:19] drwxrwx--x. 2 boinc boinc        68 Jan 14 02:18 shared
[2026-01-14 05:09:19] -rw-r--r--. 2 boinc boinc    592391 Jan 14 02:18 input.tar.gz
[2026-01-14 05:09:19] -rw-r--r--. 1 boinc boinc         0 Jan 14 02:18 boinc_lockfile
[2026-01-14 05:09:19] -rw-r--r--. 1 boinc boinc      2505 Jan 14 02:19 pandaJob.out
[2026-01-14 05:09:19] -rw-------. 1 boinc boinc    997226 Jan 14 02:23 agis_schedconf.cvmfs.json
[2026-01-14 05:09:19] -rw-------. 1 boinc boinc   1516246 Jan 14 02:23 agis_ddmendpoints.agis.ALL.json
[2026-01-14 05:09:19] drwx------. 5 boinc boinc      4096 Jan 14 02:23 pilot3
[2026-01-14 05:09:19] -rw-------. 1 boinc boinc 148738018 Jan 14 05:04 HITS.48215263._004234.pool.root.1
[2026-01-14 05:09:19] -rw-r--r--. 1 boinc boinc       531 Jan 14 05:05 boinc_task_state.xml
[2026-01-14 05:09:19] -rw-------. 1 boinc boinc      1014 Jan 14 05:06 memory_monitor_summary.json
[2026-01-14 05:09:19] -rw-------. 1 boinc boinc    386682 Jan 14 05:06 log.48215263._004234.job.log.tgz.1
[2026-01-14 05:09:19] -rw-------. 1 boinc boinc        95 Jan 14 05:07 pilot_heartbeat.json
[2026-01-14 05:09:19] -rw-------. 1 boinc boinc      7779 Jan 14 05:08 heartbeat.json
[2026-01-14 05:09:19] -rw-r--r--. 1 boinc boinc      8192 Jan 14 05:09 boinc_mmap_file
[2026-01-14 05:09:19] -rw-r--r--. 1 boinc boinc        28 Jan 14 05:09 wrapper_checkpoint.txt
[2026-01-14 05:09:19] -rw-------. 1 boinc boinc      4883 Jan 14 05:09 pilotlog.txt
[2026-01-14 05:09:19] -rw-------. 1 boinc boinc   1326952 Jan 14 05:09 log.48215263._004234.job.log.1
[2026-01-14 05:09:19] -rw-------. 1 boinc boinc       357 Jan 14 05:09 output.list
[2026-01-14 05:09:19] -rw-r--r--. 1 boinc boinc       620 Jan 14 05:09 runtime_log
[2026-01-14 05:09:19] -rw-------. 1 boinc boinc   1730560 Jan 14 05:09 result.tar.gz
[2026-01-14 05:09:19] -rw-r--r--. 1 boinc boinc      8817 Jan 14 05:09 runtime_log.err
[2026-01-14 05:09:19] -rw-------. 1 boinc boinc       654 Jan 14 05:09 2HnLDmNd1z8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmisiKDmGmBdNo.diag
[2026-01-14 05:09:19] -rw-r--r--. 1 boinc boinc     20749 Jan 14 05:09 stderr.txt
[2026-01-14 05:09:19] HITS file was successfully produced:
[2026-01-14 05:09:19] -rw-------. 1 boinc boinc 148738018 Jan 14 05:04 shared/HITS.pool.root.1
[2026-01-14 05:09:19]  *** Contents of shared directory: ***
[2026-01-14 05:09:19] total 727228
[2026-01-14 05:09:19] -rw-r--r--. 2 boinc boinc 593597642 Jan 14 02:18 ATLAS.root_0
[2026-01-14 05:09:19] -rw-r--r--. 2 boinc boinc     15847 Jan 14 02:18 start_atlas.sh
[2026-01-14 05:09:19] -rw-r--r--. 2 boinc boinc    592391 Jan 14 02:18 input.tar.gz
[2026-01-14 05:09:19] -rw-------. 1 boinc boinc 148738018 Jan 14 05:04 HITS.pool.root.1
[2026-01-14 05:09:19] -rw-------. 1 boinc boinc   1730560 Jan 14 05:09 result.tar.gz
05:09:21 (4800): run_atlas exited; CPU time 33198.080972
05:09:21 (4800): called boinc_finish(0)

</stderr_txt>
]]>

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