Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:12:58 (6441): wrapper (7.7.26015): starting
20:12:58 (6441): wrapper: running run_atlas (--nthreads 8)
[2026-01-13 20:12:58] Arguments: --nthreads 8
[2026-01-13 20:12:58] Threads: 8
[2026-01-13 20:12:58] Checking for CVMFS
[2026-01-13 20:12:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-13 20:12:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-13 20:12:58] Running cvmfs_config stat atlas.cern.ch
[2026-01-13 20:12:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-13 20:12:58] 2.11.2.0 2873 130284 91656 155112 0 57 16017941 20275201 1 130560 0 32520352 99.824 8041606 34408 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-13 20:12:58] CVMFS is ok
[2026-01-13 20:12:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 20:12:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 20:12:58] Further information can be found at the LHC@home message board.
[2026-01-13 20:12:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 20:12:58] Checking for apptainer binary...
[2026-01-13 20:12:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-13 20:12:58] Running /usr/bin/apptainer --version
[2026-01-13 20:12:58] apptainer version 1.3.2-1.el7
[2026-01-13 20:12:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 20:13:00] c-115-13.aglt2.org
[2026-01-13 20:13:00] apptainer works
[2026-01-13 20:13:00] Set ATHENA_PROC_NUMBER=8
[2026-01-13 20:13:00] Set ATHENA_CORE_NUMBER=8
[2026-01-13 20:13:00] Starting ATLAS job with PandaID=6969263418
[2026-01-13 20:13:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 21:27:47]  *** The last 200 lines of the pilot log: ***
[2026-01-13 21:27:47]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-13 21:27:47]  replicas=None
[2026-01-13 21:27:47]  scope=mc23_13p6TeV
[2026-01-13 21:27:47]  status=None
[2026-01-13 21:27:47]  status_code=0
[2026-01-13 21:27:47]  storage_token=
[2026-01-13 21:27:47]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6969263418/log.48215263._003918.job.log.tgz.1
[2026-01-13 21:27:47]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8d/c4/log.48215263._003918.job.log.tgz.1
[2026-01-13 21:27:47]  workdir=None
[2026-01-13 21:27:47] ]
[2026-01-13 21:27:47] 2026-01-14 02:27:08,519 | INFO     | transferring file log.48215263._003918.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6969263418/log.48215263._003918.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-13 21:27:47] 2026-01-14 02:27:08,520 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6969263418/log.48215263._003918.job.log.tgz.1 /tmp/boinchome/slots/0/log.48215263._003918.job
[2026-01-13 21:27:47] 2026-01-14 02:27:08,543 | INFO     | adding to output.list: log.48215263._003918.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8d/c4/log.48215263._003918.job.log.tg
[2026-01-13 21:27:47] 2026-01-14 02:27:08,544 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-13 21:27:47] 2026-01-14 02:27:08,544 | INFO     | summary of transferred files:
[2026-01-13 21:27:47] 2026-01-14 02:27:08,545 | INFO     |  -- lfn=log.48215263._003918.job.log.tgz.1, status_code=0, status=transferred
[2026-01-13 21:27:47] 2026-01-14 02:27:08,545 | INFO     | stage-out finished correctly
[2026-01-13 21:27:47] 2026-01-14 02:27:08,630 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-13 21:27:47] 2026-01-14 02:27:08,707 | INFO     | job 6969263418 has state=finished
[2026-01-13 21:27:47] 2026-01-14 02:27:08,707 | INFO     | preparing for final server update for job 6969263418 in state='finished'
[2026-01-13 21:27:47] 2026-01-14 02:27:08,777 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-13 21:27:47] 2026-01-14 02:27:08,777 | INFO     | this job has now completed (state=finished)
[2026-01-13 21:27:47] 2026-01-14 02:27:08,777 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-13 21:27:47] 2026-01-14 02:27:08,778 | INFO     | log transfer has been attempted: DONE
[2026-01-13 21:27:47] 2026-01-14 02:27:08,778 | INFO     | job 6969263418 has finished - writing final server update
[2026-01-13 21:27:47] 2026-01-14 02:27:08,778 | INFO     | total number of processed events: 400 (read)
[2026-01-13 21:27:47] 2026-01-14 02:27:08,779 | INFO     | executing command: lscpu
[2026-01-13 21:27:47] 2026-01-14 02:27:08,808 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-13 21:27:47] 2026-01-14 02:27:09,899 | INFO     | time since job start (4432s) is within the limit (349056.0s)
[2026-01-13 21:27:47] 2026-01-14 02:27:10,771 | WARNING  | process 16539 can no longer be monitored (due to stat problems) - aborting
[2026-01-13 21:27:47] 2026-01-14 02:27:10,771 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6969263418/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 21:27:47] 2026-01-14 02:27:10,868 | INFO     | number of running child processes to parent process 16539: 1
[2026-01-13 21:27:47] 2026-01-14 02:27:10,868 | INFO     | maximum number of monitored processes: 6
[2026-01-13 21:27:47] 2026-01-14 02:27:11,902 | INFO     | time since job start (4434s) is within the limit (349056.0s)
[2026-01-13 21:27:47] 2026-01-14 02:27:13,371 | INFO     | monitor loop #329: job 0:6969263418 is in state 'finished'
[2026-01-13 21:27:47] 2026-01-14 02:27:13,371 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 21:27:47] 2026-01-14 02:27:13,906 | INFO     | time since job start (4436s) is within the limit (349056.0s)
[2026-01-13 21:27:47] 2026-01-14 02:27:15,018 | INFO     | PID=10167 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-13 21:27:47] 2026-01-14 02:27:15,568 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-13 21:27:47] 2026-01-14 02:27:15,571 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1745.75
[2026-01-13 21:27:47] 2026-01-14 02:27:15,573 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6969263418/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 21:27:47] 2026-01-14 02:27:15,574 | INFO     | extracted standard info from prmon json
[2026-01-13 21:27:47] 2026-01-14 02:27:15,574 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 21:27:47] 2026-01-14 02:27:15,574 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 21:27:47] 2026-01-14 02:27:15,574 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 21:27:47] 2026-01-14 02:27:15,574 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 21:27:47] 2026-01-14 02:27:15,576 | INFO     | fitting pss+swap vs Time
[2026-01-13 21:27:47] 2026-01-14 02:27:15,576 | INFO     | sum of square deviations: 89127252.5
[2026-01-13 21:27:47] 2026-01-14 02:27:15,576 | INFO     | sum of deviations: 1010761368.4999998
[2026-01-13 21:27:47] 2026-01-14 02:27:15,577 | INFO     | mean x: 1768355515.5
[2026-01-13 21:27:47] 2026-01-14 02:27:15,577 | INFO     | mean y: 2548513.1363636362
[2026-01-13 21:27:47] 2026-01-14 02:27:15,577 | INFO     | intersect: -20051760249.95832
[2026-01-13 21:27:47] 2026-01-14 02:27:15,577 | INFO     | chi2: 0.0014216651438302918
[2026-01-13 21:27:47] 2026-01-14 02:27:15,577 | INFO     | current memory leak: 11.34 B/s (using 66 data points, chi2=0.00)
[2026-01-13 21:27:47] 2026-01-14 02:27:15,577 | INFO     | could have reported an average CPU frequency of 2025 MHz (6 samples)
[2026-01-13 21:27:47] 2026-01-14 02:27:15,578 | INFO     | ..............................
[2026-01-13 21:27:47] 2026-01-14 02:27:15,578 | INFO     | . Timing measurements:
[2026-01-13 21:27:47] 2026-01-14 02:27:15,578 | INFO     | . get job = 0 s
[2026-01-13 21:27:47] 2026-01-14 02:27:15,578 | INFO     | . initial setup = 2 s
[2026-01-13 21:27:47] 2026-01-14 02:27:15,578 | INFO     | . payload setup = 8 s
[2026-01-13 21:27:47] 2026-01-14 02:27:15,578 | INFO     | . stage-in = 0 s
[2026-01-13 21:27:47] 2026-01-14 02:27:15,578 | INFO     | . payload execution = 4401 s
[2026-01-13 21:27:47] 2026-01-14 02:27:15,578 | INFO     | . stage-out = 0 s
[2026-01-13 21:27:47] 2026-01-14 02:27:15,578 | INFO     | . log creation = 0 s
[2026-01-13 21:27:47] 2026-01-14 02:27:15,579 | INFO     | ..............................
[2026-01-13 21:27:47] 2026-01-14 02:27:15,660 | INFO     | 
[2026-01-13 21:27:47] 2026-01-14 02:27:15,660 | INFO     | job summary report
[2026-01-13 21:27:47] 2026-01-14 02:27:15,660 | INFO     | --------------------------------------------------
[2026-01-13 21:27:47] 2026-01-14 02:27:15,660 | INFO     | PanDA job id: 6969263418
[2026-01-13 21:27:47] 2026-01-14 02:27:15,661 | INFO     | task id: 48215263
[2026-01-13 21:27:47] 2026-01-14 02:27:15,661 | INFO     | errors: (none)
[2026-01-13 21:27:47] 2026-01-14 02:27:15,661 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 21:27:47] 2026-01-14 02:27:15,661 | INFO     | pilot state: finished 
[2026-01-13 21:27:47] 2026-01-14 02:27:15,661 | INFO     | transexitcode: 0
[2026-01-13 21:27:47] 2026-01-14 02:27:15,661 | INFO     | exeerrorcode: 0
[2026-01-13 21:27:47] 2026-01-14 02:27:15,662 | INFO     | exeerrordiag: 
[2026-01-13 21:27:47] 2026-01-14 02:27:15,662 | INFO     | exitcode: 0
[2026-01-13 21:27:47] 2026-01-14 02:27:15,662 | INFO     | exitmsg: OK
[2026-01-13 21:27:47] 2026-01-14 02:27:15,662 | INFO     | cpuconsumptiontime: 32744 s
[2026-01-13 21:27:47] 2026-01-14 02:27:15,662 | INFO     | nevents: 400
[2026-01-13 21:27:47] 2026-01-14 02:27:15,662 | INFO     | neventsw: 0
[2026-01-13 21:27:47] 2026-01-14 02:27:15,662 | INFO     | pid: 16539
[2026-01-13 21:27:47] 2026-01-14 02:27:15,663 | INFO     | pgrp: 16539
[2026-01-13 21:27:47] 2026-01-14 02:27:15,663 | INFO     | corecount: 8
[2026-01-13 21:27:47] 2026-01-14 02:27:15,663 | INFO     | event service: False
[2026-01-13 21:27:47] 2026-01-14 02:27:15,663 | INFO     | sizes: {0: 2283945, 6: 2284207, 11: 2284235, 4413: 2310280, 4414: 2310279, 4415: 2319517, 4422: 2319655}
[2026-01-13 21:27:47] 2026-01-14 02:27:15,663 | INFO     | --------------------------------------------------
[2026-01-13 21:27:47] 2026-01-14 02:27:15,663 | INFO     | 
[2026-01-13 21:27:47] 2026-01-14 02:27:15,663 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-13 21:27:47] 2026-01-14 02:27:15,690 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 21:27:47] 2026-01-14 02:27:15,691 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 21:27:47] 2026-01-14 02:27:15,691 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 21:27:47] 2026-01-14 02:27:15,691 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 21:27:47] 2026-01-14 02:27:15,692 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 21:27:47] 2026-01-14 02:27:15,692 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 21:27:47] 2026-01-14 02:27:15,692 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 21:27:47] 2026-01-14 02:27:15,692 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 21:27:47] 2026-01-14 02:27:15,692 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 21:27:47] 2026-01-14 02:27:15,692 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 21:27:47] 2026-01-14 02:27:15,693 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 21:27:47] 2026-01-14 02:27:15,693 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 21:27:47] 2026-01-14 02:27:15,693 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 21:27:47] 2026-01-14 02:27:15,693 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 21:27:47] 2026-01-14 02:27:15,693 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 21:27:47] 2026-01-14 02:27:15,694 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 21:27:47] 2026-01-14 02:27:15,694 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 21:27:47] 2026-01-14 02:27:15,694 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 21:27:47] 2026-01-14 02:27:15,694 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 21:27:47] 2026-01-14 02:27:15,694 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 21:27:47] 2026-01-14 02:27:15,695 | INFO     | job 6969263418 has completed (purged errors)
[2026-01-13 21:27:47] 2026-01-14 02:27:15,695 | INFO     | overall cleanup function is called
[2026-01-13 21:27:47] 2026-01-14 02:27:16,703 | INFO     | --- collectZombieJob: --- 10, [16539]
[2026-01-13 21:27:47] 2026-01-14 02:27:16,703 | INFO     | zombie collector waiting for pid 16539
[2026-01-13 21:27:47] 2026-01-14 02:27:16,703 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 21:27:47] 2026-01-14 02:27:16,703 | INFO     | collected zombie processes
[2026-01-13 21:27:47] 2026-01-14 02:27:16,704 | INFO     | will attempt to kill all subprocesses of pid=16539
[2026-01-13 21:27:47] 2026-01-14 02:27:16,788 | INFO     | process IDs to be killed: [16539] (in reverse order)
[2026-01-13 21:27:47] 2026-01-14 02:27:16,841 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 21:27:47] 2026-01-14 02:27:16,841 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 21:27:47] 2026-01-14 02:27:16,844 | INFO     | did not find any defunct processes belonging to 16539
[2026-01-13 21:27:47] 2026-01-14 02:27:16,846 | INFO     | did not find any defunct processes belonging to 16539
[2026-01-13 21:27:47] 2026-01-14 02:27:16,847 | INFO     | ready for new job
[2026-01-13 21:27:47] 2026-01-14 02:27:16,847 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 21:27:47] 2026-01-14 02:27:16,848 | INFO     | ***************************************
[2026-01-13 21:27:47] 2026-01-14 02:27:16,848 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 21:27:47] 2026-01-14 02:27:16,848 | INFO     | ***************************************
[2026-01-13 21:27:47] 2026-01-14 02:27:16,849 | INFO     | 
[2026-01-13 21:27:47] 2026-01-14 02:27:16,849 | INFO     | architecture information:
[2026-01-13 21:27:47] 2026-01-14 02:27:16,850 | INFO     | executing command: cat /etc/os-release
[2026-01-13 21:27:47] 2026-01-14 02:27:16,866 | INFO     | cat /etc/os-release:
[2026-01-13 21:27:47] NAME="CentOS Linux"
[2026-01-13 21:27:47] VERSION="7 (Core)"
[2026-01-13 21:27:47] ID="centos"
[2026-01-13 21:27:47] ID_LIKE="rhel fedora"
[2026-01-13 21:27:47] VERSION_ID="7"
[2026-01-13 21:27:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 21:27:47] ANSI_COLOR="0;31"
[2026-01-13 21:27:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 21:27:47] HOME_URL="https://www.centos.org/"
[2026-01-13 21:27:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 21:27:47] 
[2026-01-13 21:27:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 21:27:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 21:27:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 21:27:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 21:27:47] 
[2026-01-13 21:27:47] 2026-01-14 02:27:16,867 | INFO     | ***************************************
[2026-01-13 21:27:47] 2026-01-14 02:27:17,370 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-13 21:27:47] 2026-01-14 02:27:17,389 | INFO     | sufficient remaining disk space (17864589312 B)
[2026-01-13 21:27:47] 2026-01-14 02:27:17,390 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 21:27:47] 2026-01-14 02:27:17,390 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 21:27:47] 2026-01-14 02:27:17,390 | INFO     | update_server=False
[2026-01-13 21:27:47] 2026-01-14 02:27:17,390 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 21:27:47] 2026-01-14 02:27:17,391 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 21:27:47] 2026-01-14 02:27:17,391 | INFO     | aborting loop
[2026-01-13 21:27:47] 2026-01-14 02:27:17,391 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 21:27:47] 2026-01-14 02:27:17,392 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 21:27:47] 2026-01-14 02:27:17,564 | INFO     | all payload control threads have been joined
[2026-01-13 21:27:47] 2026-01-14 02:27:17,800 | INFO     | all data control threads have been joined
[2026-01-13 21:27:47] 2026-01-14 02:27:18,255 | INFO     | all job control threads have been joined
[2026-01-13 21:27:47] 2026-01-14 02:27:18,396 | INFO     | [job] retrieve thread has finished
[2026-01-13 21:27:47] 2026-01-14 02:27:18,397 | INFO     | [job] job monitor thread has finished
[2026-01-13 21:27:47] 2026-01-14 02:27:18,397 | INFO     | [job] queue monitor thread has finished
[2026-01-13 21:27:47] 2026-01-14 02:27:18,470 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 21:27:47] 2026-01-14 02:27:18,569 | INFO     | [payload] control thread has finished
[2026-01-13 21:27:47] 2026-01-14 02:27:18,805 | INFO     | [data] control thread has finished
[2026-01-13 21:27:47] 2026-01-14 02:27:19,188 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 21:27:47] 2026-01-14 02:27:19,216 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 21:27:47] 2026-01-14 02:27:19,239 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 21:27:47] 2026-01-14 02:27:19,261 | INFO     | [job] control thread has finished
[2026-01-13 21:27:47] 2026-01-14 02:27:19,264 | INFO     | [data] copytool_in thread has finished
[2026-01-13 21:27:47] 2026-01-14 02:27:19,266 | INFO     | [job] validate thread has finished
[2026-01-13 21:27:47] 2026-01-14 02:27:19,271 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 21:27:47] 2026-01-14 02:27:19,397 | INFO     | [data] copytool_out thread has finished
[2026-01-13 21:27:47] 2026-01-14 02:27:19,576 | INFO     | [payload] failed_post thread has finished
[2026-01-13 21:27:47] 2026-01-14 02:27:19,816 | INFO     | [payload] validate_post thread has finished
[2026-01-13 21:27:47] 2026-01-14 02:27:23,222 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 21:27:47] 2026-01-14 02:27:23,882 | INFO     | [monitor] cgroup control has ended
[2026-01-13 21:27:47] 2026-01-14 02:27:25,178 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139760253118272)>', '<ExcThread(monitor, started 139759435376384)>']
[2026-01-13 21:27:47] 2026-01-14 02:27:30,203 | INFO     | all workflow threads have been joined
[2026-01-13 21:27:47] 2026-01-14 02:27:30,204 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 21:27:47] 2026-01-14 02:27:30,205 | INFO     | traces error code: 0
[2026-01-13 21:27:47] 2026-01-14 02:27:30,205 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 21:27:47] 2026-01-14 02:27:47,220 | INFO     | PID=10167 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-13 21:27:47] 2026-01-14 02:27:47,221 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 21:27:47] 2026-01-14 02:27:47,222 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 21:27:47] 2026-01-14 02:27:47,222 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 21:27:47] 2026-01-14 02:27:47,222 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 21:27:47] 2026-01-14 02:27:47,222 | CRITICAL | thread 'MainThread' is not alive
[2026-01-13 21:27:47] 2026-01-14 02:27:47,222 | INFO     | [monitor] control thread has ended
[2026-01-13 21:27:47] 2026-01-14 02:27:47,327 [wrapper] ==== pilot stdout END ====
[2026-01-13 21:27:47] 2026-01-14 02:27:47,331 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 21:27:47] 2026-01-14 02:27:47,337 [wrapper] pilotpid: 10167
[2026-01-13 21:27:47] 2026-01-14 02:27:47,341 [wrapper] Pilot exit status: 0
[2026-01-13 21:27:47] 2026-01-14 02:27:47,360 [wrapper] pandaids: 6969263418
[2026-01-13 21:27:47] 2026-01-14 02:27:47,405 [wrapper] cleanup supervisor_pilot 14679 10168
[2026-01-13 21:27:47] 2026-01-14 02:27:47,410 [wrapper] Test setup, not cleaning
[2026-01-13 21:27:47] 2026-01-14 02:27:47,415 [wrapper] apfmon messages muted
[2026-01-13 21:27:47] 2026-01-14 02:27:47,419 [wrapper] ==== wrapper stdout END ====
[2026-01-13 21:27:47] 2026-01-14 02:27:47,423 [wrapper] ==== wrapper stderr END ====
[2026-01-13 21:27:47]  *** Error codes and diagnostics ***
[2026-01-13 21:27:47]     "exeErrorCode": 0,
[2026-01-13 21:27:47]     "exeErrorDiag": "",
[2026-01-13 21:27:47]     "pilotErrorCode": 0,
[2026-01-13 21:27:47]     "pilotErrorDiag": "",
[2026-01-13 21:27:47]  *** Listing of results directory ***
[2026-01-13 21:27:47] total 733044
[2026-01-13 21:27:47] -rwx------ 1 boincer umatlas     36322 Jan 13 17:01 runpilot2-wrapper.sh
[2026-01-13 21:27:47] -rw-r--r-- 1 boincer umatlas      5112 Jan 13 17:12 queuedata.json
[2026-01-13 21:27:47] -rw-r--r-- 1 boincer umatlas    579449 Jan 13 17:12 pilot3.tar.gz
[2026-01-13 21:27:47] -rw-r--r-- 1 boincer umatlas       100 Jan 13 20:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 21:27:47] -rwxr-xr-x 1 boincer umatlas      7986 Jan 13 20:12 run_atlas
[2026-01-13 21:27:47] -rw-r--r-- 1 boincer umatlas       105 Jan 13 20:12 job.xml
[2026-01-13 21:27:47] -rw-r--r-- 2 boincer umatlas 590309803 Jan 13 20:12 EVNT.32794306._000157.pool.root.1
[2026-01-13 21:27:47] drwxrwx--x 2 boincer umatlas      4096 Jan 13 20:12 shared
[2026-01-13 21:27:47] -rw-r--r-- 2 boincer umatlas    592396 Jan 13 20:12 input.tar.gz
[2026-01-13 21:27:47] -rw-r--r-- 2 boincer umatlas     15847 Jan 13 20:12 start_atlas.sh
[2026-01-13 21:27:47] -rw-r--r-- 1 boincer umatlas         0 Jan 13 20:12 boinc_lockfile
[2026-01-13 21:27:47] -rw-r--r-- 1 boincer umatlas      2505 Jan 13 20:13 pandaJob.out
[2026-01-13 21:27:47] -rw------- 1 boincer umatlas        57 Jan 13 20:13 setup.sh.local
[2026-01-13 21:27:47] -rw------- 1 boincer umatlas    997218 Jan 13 20:13 agis_schedconf.cvmfs.json
[2026-01-13 21:27:47] -rw------- 1 boincer umatlas   1516246 Jan 13 20:13 agis_ddmendpoints.agis.ALL.json
[2026-01-13 21:27:47] drwx------ 5 boincer umatlas      4096 Jan 13 20:13 pilot3
[2026-01-13 21:27:47] -rw-r--r-- 1 boincer umatlas      5909 Jan 13 21:19 init_data.xml
[2026-01-13 21:27:47] -rw------- 1 boincer umatlas 154453426 Jan 13 21:26 HITS.48215263._003918.pool.root.1
[2026-01-13 21:27:47] -rw-r--r-- 1 boincer umatlas       531 Jan 13 21:27 boinc_task_state.xml
[2026-01-13 21:27:47] -rw------- 1 boincer umatlas      1044 Jan 13 21:27 memory_monitor_summary.json
[2026-01-13 21:27:47] -rw------- 1 boincer umatlas    327862 Jan 13 21:27 log.48215263._003918.job.log.tgz.1
[2026-01-13 21:27:47] -rw------- 1 boincer umatlas        95 Jan 13 21:27 pilot_heartbeat.json
[2026-01-13 21:27:47] -rw------- 1 boincer umatlas      7833 Jan 13 21:27 heartbeat.json
[2026-01-13 21:27:47] -rw-r--r-- 1 boincer umatlas      8192 Jan 13 21:27 boinc_mmap_file
[2026-01-13 21:27:47] -rw-r--r-- 1 boincer umatlas        27 Jan 13 21:27 wrapper_checkpoint.txt
[2026-01-13 21:27:47] -rw------- 1 boincer umatlas       815 Jan 13 21:27 pilotlog.txt
[2026-01-13 21:27:47] -rw------- 1 boincer umatlas    643372 Jan 13 21:27 log.48215263._003918.job.log.1
[2026-01-13 21:27:47] -rw------- 1 boincer umatlas       357 Jan 13 21:27 output.list
[2026-01-13 21:27:47] -rw-r--r-- 1 boincer umatlas       620 Jan 13 21:27 runtime_log
[2026-01-13 21:27:47] -rw------- 1 boincer umatlas    993280 Jan 13 21:27 result.tar.gz
[2026-01-13 21:27:47] -rw------- 1 boincer umatlas       658 Jan 13 21:27 XHbLDmBd1z8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm7qiKDmyZ4acn.diag
[2026-01-13 21:27:47] -rw-r--r-- 1 boincer umatlas      9342 Jan 13 21:27 runtime_log.err
[2026-01-13 21:27:47] -rw-r--r-- 1 boincer umatlas     21992 Jan 13 21:27 stderr.txt
[2026-01-13 21:27:47] HITS file was successfully produced:
[2026-01-13 21:27:47] -rw------- 1 boincer umatlas 154453426 Jan 13 21:26 shared/HITS.pool.root.1
[2026-01-13 21:27:47]  *** Contents of shared directory: ***
[2026-01-13 21:27:47] total 728888
[2026-01-13 21:27:47] -rw-r--r-- 2 boincer umatlas 590309803 Jan 13 20:12 ATLAS.root_0
[2026-01-13 21:27:47] -rw-r--r-- 2 boincer umatlas    592396 Jan 13 20:12 input.tar.gz
[2026-01-13 21:27:47] -rw-r--r-- 2 boincer umatlas     15847 Jan 13 20:12 start_atlas.sh
[2026-01-13 21:27:47] -rw------- 1 boincer umatlas 154453426 Jan 13 21:26 HITS.pool.root.1
[2026-01-13 21:27:47] -rw------- 1 boincer umatlas    993280 Jan 13 21:27 result.tar.gz
21:27:49 (6441): run_atlas exited; CPU time 32720.055920
21:27:49 (6441): called boinc_finish(0)

</stderr_txt>
]]>

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