Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:09:25 (1826): wrapper (7.7.26015): starting
05:09:25 (1826): wrapper: running run_atlas (--nthreads 8)
[2026-01-14 05:09:25] Arguments: --nthreads 8
[2026-01-14 05:09:25] Threads: 8
[2026-01-14 05:09:25] Checking for CVMFS
[2026-01-14 05:09:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 05:09:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 05:09:26] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 05:09:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 05:09:27] 2.11.2.0 2467 42115 127648 155116 0 61 24074156 25165824 96 130560 0 19001848 99.811 12171330 2936 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-14 05:09:27] CVMFS is ok
[2026-01-14 05:09:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 05:09:27] Checking for apptainer binary...
[2026-01-14 05:09:27] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 05:09:27] Running /usr/bin/apptainer --version
[2026-01-14 05:09:27] apptainer version 1.3.2-1.el7
[2026-01-14 05:09:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 05:09:52] cg-vwn487.simple-grid.lan
[2026-01-14 05:09:52] apptainer works
[2026-01-14 05:09:52] Set ATHENA_PROC_NUMBER=8
[2026-01-14 05:09:52] Set ATHENA_CORE_NUMBER=8
[2026-01-14 05:09:52] Starting ATLAS job with PandaID=6969263424
[2026-01-14 05:09:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 07:54:44]  *** The last 200 lines of the pilot log: ***
[2026-01-14 07:54:44] 2026-01-14 06:53:30,423 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6969263424/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 07:54:44] 2026-01-14 06:53:30,424 | INFO     | extracted standard info from prmon json
[2026-01-14 07:54:44] 2026-01-14 06:53:30,424 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 07:54:44] 2026-01-14 06:53:30,424 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 07:54:44] 2026-01-14 06:53:30,424 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 07:54:44] 2026-01-14 06:53:30,424 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 07:54:44] 2026-01-14 06:53:30,428 | INFO     | fitting pss+swap vs Time
[2026-01-14 07:54:44] 2026-01-14 06:53:30,428 | INFO     | sum of square deviations: 964976232.5
[2026-01-14 07:54:44] 2026-01-14 06:53:30,429 | INFO     | sum of deviations: 37633319138.00001
[2026-01-14 07:54:44] 2026-01-14 06:53:30,429 | INFO     | mean x: 1768369017.5
[2026-01-14 07:54:44] 2026-01-14 06:53:30,429 | INFO     | mean y: 2469051.7671232875
[2026-01-14 07:54:44] 2026-01-14 06:53:30,429 | INFO     | intersect: -68962541015.80367
[2026-01-14 07:54:44] 2026-01-14 06:53:30,430 | INFO     | chi2: 7.367001521132468
[2026-01-14 07:54:44] 2026-01-14 06:53:30,430 | INFO     | sum of square deviations: 869188390.0
[2026-01-14 07:54:44] 2026-01-14 06:53:30,431 | INFO     | sum of deviations: 46367973432.0
[2026-01-14 07:54:44] 2026-01-14 06:53:30,431 | INFO     | mean x: 1768368865.0
[2026-01-14 07:54:44] 2026-01-14 06:53:30,440 | INFO     | mean y: 2482525.368794326
[2026-01-14 07:54:44] 2026-01-14 06:53:30,440 | INFO     | intersect: -94333430716.97905
[2026-01-14 07:54:44] 2026-01-14 06:53:30,440 | INFO     | chi2: 6.696806416005731
[2026-01-14 07:54:44] 2026-01-14 06:53:30,440 | INFO     | current chi2=6.696806416005731 (change=9.097257591222998 %)
[2026-01-14 07:54:44] 2026-01-14 06:53:30,440 | INFO     | right removable region: 140
[2026-01-14 07:54:44] 2026-01-14 06:53:30,441 | INFO     | sum of square deviations: 869188390.0
[2026-01-14 07:54:44] 2026-01-14 06:53:30,442 | INFO     | sum of deviations: -12262979145.0
[2026-01-14 07:54:44] 2026-01-14 06:53:30,442 | INFO     | mean x: 1768369170.0
[2026-01-14 07:54:44] 2026-01-14 06:53:30,442 | INFO     | mean y: 2548393.361702128
[2026-01-14 07:54:44] 2026-01-14 06:53:30,442 | INFO     | intersect: 24951655516.583817
[2026-01-14 07:54:44] 2026-01-14 06:53:30,442 | INFO     | chi2: 2.430051799334076
[2026-01-14 07:54:44] 2026-01-14 06:53:30,443 | INFO     | current chi2=2.430051799334076 (change=67.01437087581157 %)
[2026-01-14 07:54:44] 2026-01-14 06:53:30,443 | INFO     | sum of square deviations: 779958810.0
[2026-01-14 07:54:44] 2026-01-14 06:53:30,444 | INFO     | sum of deviations: -37258544532.0
[2026-01-14 07:54:44] 2026-01-14 06:53:30,444 | INFO     | mean x: 1768369322.5
[2026-01-14 07:54:44] 2026-01-14 06:53:30,444 | INFO     | mean y: 2590677.5147058824
[2026-01-14 07:54:44] 2026-01-14 06:53:30,444 | INFO     | intersect: 84477394098.7222
[2026-01-14 07:54:44] 2026-01-14 06:53:30,444 | INFO     | chi2: 0.9494820756278557
[2026-01-14 07:54:44] 2026-01-14 06:53:30,445 | INFO     | current chi2=0.9494820756278557 (change=60.92749644727537 %)
[2026-01-14 07:54:44] 2026-01-14 06:53:30,445 | INFO     | sum of square deviations: 697054930.0
[2026-01-14 07:54:44] 2026-01-14 06:53:30,446 | INFO     | sum of deviations: -35479808627.0
[2026-01-14 07:54:44] 2026-01-14 06:53:30,446 | INFO     | mean x: 1768369475.0
[2026-01-14 07:54:44] 2026-01-14 06:53:30,446 | INFO     | mean y: 2587317.7022900763
[2026-01-14 07:54:44] 2026-01-14 06:53:30,446 | INFO     | intersect: 90011864714.00226
[2026-01-14 07:54:44] 2026-01-14 06:53:30,446 | INFO     | chi2: 0.9352567519481234
[2026-01-14 07:54:44] 2026-01-14 06:53:30,446 | INFO     | current chi2=0.9352567519481234 (change=1.4982192971179185 %)
[2026-01-14 07:54:44] 2026-01-14 06:53:30,447 | INFO     | left removable region: 30
[2026-01-14 07:54:44] 2026-01-14 06:53:30,447 | INFO     | sum of square deviations: 412686807.5
[2026-01-14 07:54:44] 2026-01-14 06:53:30,447 | INFO     | sum of deviations: -13494447297.5
[2026-01-14 07:54:44] 2026-01-14 06:53:30,448 | INFO     | mean x: 1768369749.5
[2026-01-14 07:54:44] 2026-01-14 06:53:30,448 | INFO     | mean y: 2580165.2636363637
[2026-01-14 07:54:44] 2026-01-14 06:53:30,448 | INFO     | intersect: 57826508513.44817
[2026-01-14 07:54:44] 2026-01-14 06:53:30,448 | INFO     | chi2: 0.1133670024326637
[2026-01-14 07:54:44] 2026-01-14 06:53:30,448 | INFO     | current memory leak: -32.70 B/s (using 110 data points, chi2=0.11)
[2026-01-14 07:54:44] 2026-01-14 06:53:30,449 | INFO     | could have reported an average CPU frequency of 2249 MHz (8 samples)
[2026-01-14 07:54:44] 2026-01-14 06:53:30,449 | INFO     | ..............................
[2026-01-14 07:54:44] 2026-01-14 06:53:30,449 | INFO     | . Timing measurements:
[2026-01-14 07:54:44] 2026-01-14 06:53:30,449 | INFO     | . get job = 0 s
[2026-01-14 07:54:44] 2026-01-14 06:53:30,449 | INFO     | . initial setup = 9 s
[2026-01-14 07:54:44] 2026-01-14 06:53:30,449 | INFO     | . payload setup = 147 s
[2026-01-14 07:54:44] 2026-01-14 06:53:30,450 | INFO     | . stage-in = 0 s
[2026-01-14 07:54:44] 2026-01-14 06:53:30,450 | INFO     | . payload execution = 9072 s
[2026-01-14 07:54:44] 2026-01-14 06:53:30,450 | INFO     | . stage-out = 3 s
[2026-01-14 07:54:44] 2026-01-14 06:53:30,450 | INFO     | . log creation = 1 s
[2026-01-14 07:54:44] 2026-01-14 06:53:30,450 | INFO     | ..............................
[2026-01-14 07:54:44] 2026-01-14 06:53:30,654 | INFO     | 
[2026-01-14 07:54:44] 2026-01-14 06:53:30,655 | INFO     | job summary report
[2026-01-14 07:54:44] 2026-01-14 06:53:30,655 | INFO     | --------------------------------------------------
[2026-01-14 07:54:44] 2026-01-14 06:53:30,655 | INFO     | PanDA job id: 6969263424
[2026-01-14 07:54:44] 2026-01-14 06:53:30,655 | INFO     | task id: 48215263
[2026-01-14 07:54:44] 2026-01-14 06:53:30,655 | INFO     | errors: (none)
[2026-01-14 07:54:44] 2026-01-14 06:53:30,655 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 07:54:44] 2026-01-14 06:53:30,655 | INFO     | pilot state: finished 
[2026-01-14 07:54:44] 2026-01-14 06:53:30,656 | INFO     | transexitcode: 0
[2026-01-14 07:54:44] 2026-01-14 06:53:30,656 | INFO     | exeerrorcode: 0
[2026-01-14 07:54:44] 2026-01-14 06:53:30,656 | INFO     | exeerrordiag: 
[2026-01-14 07:54:44] 2026-01-14 06:53:30,656 | INFO     | exitcode: 0
[2026-01-14 07:54:44] 2026-01-14 06:53:30,656 | INFO     | exitmsg: OK
[2026-01-14 07:54:44] 2026-01-14 06:53:30,656 | INFO     | cpuconsumptiontime: 32607 s
[2026-01-14 07:54:44] 2026-01-14 06:53:30,656 | INFO     | nevents: 400
[2026-01-14 07:54:44] 2026-01-14 06:53:30,656 | INFO     | neventsw: 0
[2026-01-14 07:54:44] 2026-01-14 06:53:30,656 | INFO     | pid: 12143
[2026-01-14 07:54:44] 2026-01-14 06:53:30,656 | INFO     | pgrp: 12143
[2026-01-14 07:54:44] 2026-01-14 06:53:30,657 | INFO     | corecount: 8
[2026-01-14 07:54:44] 2026-01-14 06:53:30,657 | INFO     | event service: False
[2026-01-14 07:54:44] 2026-01-14 06:53:30,657 | INFO     | sizes: {0: 2283117, 1: 2283802, 2: 2283973, 12: 2284001, 23: 2284029, 34: 2284057, 44: 2284213, 55: 2284241, 66: 2284269, 77: 2284297, 87: 2284353, 98: 2284661, 10
[2026-01-14 07:54:44] 2026-01-14 06:53:30,657 | INFO     | --------------------------------------------------
[2026-01-14 07:54:44] 2026-01-14 06:53:30,657 | INFO     | 
[2026-01-14 07:54:44] 2026-01-14 06:53:30,657 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-01-14 07:54:44] 2026-01-14 06:53:31,060 | INFO     | PID=5637 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-14 07:54:44] 2026-01-14 06:53:31,060 | INFO     | .. there are 2 such processes running
[2026-01-14 07:54:44] 2026-01-14 06:53:31,208 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 07:54:44] 2026-01-14 06:53:31,208 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 07:54:44] 2026-01-14 06:53:31,208 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 07:54:44] 2026-01-14 06:53:31,208 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 07:54:44] 2026-01-14 06:53:31,208 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 07:54:44] 2026-01-14 06:53:31,209 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 07:54:44] 2026-01-14 06:53:31,209 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 07:54:44] 2026-01-14 06:53:31,209 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 07:54:44] 2026-01-14 06:53:31,209 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 07:54:44] 2026-01-14 06:53:31,209 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 07:54:44] 2026-01-14 06:53:31,209 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 07:54:44] 2026-01-14 06:53:31,209 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 07:54:44] 2026-01-14 06:53:31,209 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 07:54:44] 2026-01-14 06:53:31,209 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 07:54:44] 2026-01-14 06:53:31,210 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 07:54:44] 2026-01-14 06:53:31,210 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 07:54:44] 2026-01-14 06:53:31,210 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 07:54:44] 2026-01-14 06:53:31,210 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 07:54:44] 2026-01-14 06:53:31,210 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 07:54:44] 2026-01-14 06:53:31,210 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 07:54:44] 2026-01-14 06:53:31,210 | INFO     | job 6969263424 has completed (purged errors)
[2026-01-14 07:54:44] 2026-01-14 06:53:31,210 | INFO     | overall cleanup function is called
[2026-01-14 07:54:44] 2026-01-14 06:53:32,219 | INFO     | --- collectZombieJob: --- 10, [12143]
[2026-01-14 07:54:44] 2026-01-14 06:53:32,220 | INFO     | zombie collector waiting for pid 12143
[2026-01-14 07:54:44] 2026-01-14 06:53:32,220 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 07:54:44] 2026-01-14 06:53:32,220 | INFO     | collected zombie processes
[2026-01-14 07:54:44] 2026-01-14 06:53:32,220 | INFO     | will attempt to kill all subprocesses of pid=12143
[2026-01-14 07:54:44] 2026-01-14 06:53:32,306 | INFO     | process IDs to be killed: [12143] (in reverse order)
[2026-01-14 07:54:44] 2026-01-14 06:53:33,062 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 07:54:44] 2026-01-14 06:53:33,062 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 07:54:44] 2026-01-14 06:53:33,064 | INFO     | did not find any defunct processes belonging to 12143
[2026-01-14 07:54:44] 2026-01-14 06:53:33,066 | INFO     | did not find any defunct processes belonging to 12143
[2026-01-14 07:54:44] 2026-01-14 06:53:33,067 | INFO     | ready for new job
[2026-01-14 07:54:44] 2026-01-14 06:53:33,067 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 07:54:44] 2026-01-14 06:53:33,069 | INFO     | ***************************************
[2026-01-14 07:54:44] 2026-01-14 06:53:33,069 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 07:54:44] 2026-01-14 06:53:33,069 | INFO     | ***************************************
[2026-01-14 07:54:44] 2026-01-14 06:53:33,069 | INFO     | 
[2026-01-14 07:54:44] 2026-01-14 06:53:33,070 | INFO     | pilot is running in a VM
[2026-01-14 07:54:44] 2026-01-14 06:53:33,070 | INFO     | architecture information:
[2026-01-14 07:54:44] 2026-01-14 06:53:33,070 | INFO     | executing command: cat /etc/os-release
[2026-01-14 07:54:44] 2026-01-14 06:53:33,299 | INFO     | cat /etc/os-release:
[2026-01-14 07:54:44] NAME="CentOS Linux"
[2026-01-14 07:54:44] VERSION="7 (Core)"
[2026-01-14 07:54:44] ID="centos"
[2026-01-14 07:54:44] ID_LIKE="rhel fedora"
[2026-01-14 07:54:44] VERSION_ID="7"
[2026-01-14 07:54:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 07:54:44] ANSI_COLOR="0;31"
[2026-01-14 07:54:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 07:54:44] HOME_URL="https://www.centos.org/"
[2026-01-14 07:54:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 07:54:44] 
[2026-01-14 07:54:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 07:54:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 07:54:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 07:54:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 07:54:44] 
[2026-01-14 07:54:44] 2026-01-14 06:53:33,299 | INFO     | ***************************************
[2026-01-14 07:54:44] 2026-01-14 06:53:33,803 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-01-14 07:54:44] 2026-01-14 06:53:34,072 | INFO     | sufficient remaining disk space (494458109952 B)
[2026-01-14 07:54:44] 2026-01-14 06:53:34,072 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 07:54:44] 2026-01-14 06:53:34,073 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 07:54:44] 2026-01-14 06:53:34,073 | INFO     | update_server=False
[2026-01-14 07:54:44] 2026-01-14 06:53:34,073 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 07:54:44] 2026-01-14 06:53:34,073 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 07:54:44] 2026-01-14 06:53:34,567 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 07:54:44] 2026-01-14 06:53:34,568 | INFO     | aborting loop
[2026-01-14 07:54:44] 2026-01-14 06:53:34,734 | INFO     | all data control threads have been joined
[2026-01-14 07:54:44] 2026-01-14 06:53:34,830 | INFO     | all job control threads have been joined
[2026-01-14 07:54:44] 2026-01-14 06:53:35,079 | INFO     | [job] retrieve thread has finished
[2026-01-14 07:54:44] 2026-01-14 06:53:35,105 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 07:54:44] 2026-01-14 06:53:35,172 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 07:54:44] 2026-01-14 06:53:35,379 | INFO     | all payload control threads have been joined
[2026-01-14 07:54:44] 2026-01-14 06:53:35,431 | INFO     | [payload] validate_post thread has finished
[2026-01-14 07:54:44] 2026-01-14 06:53:35,434 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 07:54:44] 2026-01-14 06:53:35,574 | INFO     | [job] job monitor thread has finished
[2026-01-14 07:54:44] 2026-01-14 06:53:35,631 | INFO     | [job] validate thread has finished
[2026-01-14 07:54:44] 2026-01-14 06:53:35,670 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 07:54:44] 2026-01-14 06:53:35,741 | INFO     | [data] control thread has finished
[2026-01-14 07:54:44] 2026-01-14 06:53:35,837 | INFO     | [job] control thread has finished
[2026-01-14 07:54:44] 2026-01-14 06:53:35,923 | INFO     | [data] copytool_in thread has finished
[2026-01-14 07:54:44] 2026-01-14 06:53:36,081 | INFO     | [data] copytool_out thread has finished
[2026-01-14 07:54:44] 2026-01-14 06:53:36,085 | INFO     | [payload] failed_post thread has finished
[2026-01-14 07:54:44] 2026-01-14 06:53:36,342 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 07:54:44] 2026-01-14 06:53:36,385 | INFO     | [payload] control thread has finished
[2026-01-14 07:54:44] 2026-01-14 06:53:36,676 | INFO     | [job] queue monitor thread has finished
[2026-01-14 07:54:44] 2026-01-14 06:53:39,443 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 07:54:44] 2026-01-14 06:53:44,688 | INFO     | job.realtimelogging is not enabled
[2026-01-14 07:54:44] 2026-01-14 06:53:45,694 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 07:54:44] 2026-01-14 06:54:03,233 | INFO     | PID=5637 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-14 07:54:44] 2026-01-14 06:54:03,233 | INFO     | .. there are 2 such processes running
[2026-01-14 07:54:44] 2026-01-14 06:54:03,233 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 07:54:44] 2026-01-14 06:54:03,233 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 07:54:44] 2026-01-14 06:54:03,234 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 07:54:44] 2026-01-14 06:54:31,251 | INFO     | [monitor] cgroup control has ended
[2026-01-14 07:54:44] 2026-01-14 06:54:33,124 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139932102981440)>', '<ExcThread(monitor, started 139931443787520)>']
[2026-01-14 07:54:44] 2026-01-14 06:54:33,413 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 07:54:44] 2026-01-14 06:54:33,414 | INFO     | [monitor] control thread has ended
[2026-01-14 07:54:44] 2026-01-14 06:54:38,150 | INFO     | all workflow threads have been joined
[2026-01-14 07:54:44] 2026-01-14 06:54:38,151 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 07:54:44] 2026-01-14 06:54:38,151 | INFO     | traces error code: 0
[2026-01-14 07:54:44] 2026-01-14 06:54:38,151 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 07:54:44] 2026-01-14 06:54:38,634 [wrapper] ==== pilot stdout END ====
[2026-01-14 07:54:44] 2026-01-14 06:54:38,741 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 07:54:44] 2026-01-14 06:54:38,858 [wrapper] pilotpid: 5637
[2026-01-14 07:54:44] 2026-01-14 06:54:38,966 [wrapper] Pilot exit status: 0
[2026-01-14 07:54:44] 2026-01-14 06:54:39,613 [wrapper] pandaids: 6969263424
[2026-01-14 07:54:44] 2026-01-14 06:54:40,856 [wrapper] cleanup supervisor_pilot 28838 5638
[2026-01-14 07:54:44] 2026-01-14 06:54:40,975 [wrapper] Test setup, not cleaning
[2026-01-14 07:54:44] 2026-01-14 06:54:41,104 [wrapper] apfmon messages muted
[2026-01-14 07:54:44] 2026-01-14 06:54:41,217 [wrapper] ==== wrapper stdout END ====
[2026-01-14 07:54:44] 2026-01-14 06:54:41,328 [wrapper] ==== wrapper stderr END ====
[2026-01-14 07:54:44]  *** Error codes and diagnostics ***
[2026-01-14 07:54:44]     "exeErrorCode": 0,
[2026-01-14 07:54:44]     "exeErrorDiag": "",
[2026-01-14 07:54:44]     "pilotErrorCode": 0,
[2026-01-14 07:54:44]     "pilotErrorDiag": "",
[2026-01-14 07:54:44]  *** Listing of results directory ***
[2026-01-14 07:54:44] total 728460
[2026-01-14 07:54:44] -rwx------. 1 boinc boinc     36322 Jan 13 23:01 runpilot2-wrapper.sh
[2026-01-14 07:54:44] -rw-r--r--. 1 boinc boinc      5112 Jan 13 23:12 queuedata.json
[2026-01-14 07:54:44] -rw-r--r--. 1 boinc boinc    579449 Jan 13 23:12 pilot3.tar.gz
[2026-01-14 07:54:44] -rw-r--r--. 1 boinc boinc       100 Jan 14 05:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 07:54:44] -rwxr-xr-x. 1 boinc boinc      7986 Jan 14 05:09 run_atlas
[2026-01-14 07:54:44] -rw-r--r--. 1 boinc boinc       105 Jan 14 05:09 job.xml
[2026-01-14 07:54:44] -rw-r--r--. 2 boinc boinc 590309803 Jan 14 05:09 EVNT.32794306._000157.pool.root.1
[2026-01-14 07:54:44] -rw-r--r--. 1 boinc boinc      6390 Jan 14 05:09 init_data.xml
[2026-01-14 07:54:44] -rw-r--r--. 2 boinc boinc     15847 Jan 14 05:09 start_atlas.sh
[2026-01-14 07:54:44] drwxrwx--x. 2 boinc boinc        68 Jan 14 05:09 shared
[2026-01-14 07:54:44] -rw-r--r--. 2 boinc boinc    592397 Jan 14 05:09 input.tar.gz
[2026-01-14 07:54:44] -rw-r--r--. 1 boinc boinc         0 Jan 14 05:09 boinc_lockfile
[2026-01-14 07:54:44] -rw-r--r--. 1 boinc boinc      2505 Jan 14 05:09 pandaJob.out
[2026-01-14 07:54:44] -rw-------. 1 boinc boinc    997226 Jan 14 05:14 agis_schedconf.cvmfs.json
[2026-01-14 07:54:44] -rw-------. 1 boinc boinc   1516246 Jan 14 05:14 agis_ddmendpoints.agis.ALL.json
[2026-01-14 07:54:44] drwx------. 5 boinc boinc      4096 Jan 14 05:14 pilot3
[2026-01-14 07:54:44] -rw-------. 1 boinc boinc 148346734 Jan 14 07:50 HITS.48215263._003924.pool.root.1
[2026-01-14 07:54:44] -rw-r--r--. 1 boinc boinc       531 Jan 14 07:50 boinc_task_state.xml
[2026-01-14 07:54:44] -rw-------. 1 boinc boinc      1015 Jan 14 07:51 memory_monitor_summary.json
[2026-01-14 07:54:44] -rw-------. 1 boinc boinc    400154 Jan 14 07:51 log.48215263._003924.job.log.tgz.1
[2026-01-14 07:54:44] -rw-------. 1 boinc boinc        95 Jan 14 07:53 pilot_heartbeat.json
[2026-01-14 07:54:44] -rw-------. 1 boinc boinc      7778 Jan 14 07:53 heartbeat.json
[2026-01-14 07:54:44] -rw-------. 1 boinc boinc      4955 Jan 14 07:54 pilotlog.txt
[2026-01-14 07:54:44] -rw-r--r--. 1 boinc boinc      8192 Jan 14 07:54 boinc_mmap_file
[2026-01-14 07:54:44] -rw-r--r--. 1 boinc boinc        27 Jan 14 07:54 wrapper_checkpoint.txt
[2026-01-14 07:54:44] -rw-------. 1 boinc boinc   1287135 Jan 14 07:54 log.48215263._003924.job.log.1
[2026-01-14 07:54:44] -rw-------. 1 boinc boinc       357 Jan 14 07:54 output.list
[2026-01-14 07:54:44] -rw-r--r--. 1 boinc boinc       620 Jan 14 07:54 runtime_log
[2026-01-14 07:54:44] -rw-------. 1 boinc boinc   1710080 Jan 14 07:54 result.tar.gz
[2026-01-14 07:54:44] -rw-r--r--. 1 boinc boinc      8816 Jan 14 07:54 runtime_log.err
[2026-01-14 07:54:44] -rw-------. 1 boinc boinc       652 Jan 14 07:54 9vjLDmBd1z8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmDriKDmrJUqUn.diag
[2026-01-14 07:54:44] -rw-r--r--. 1 boinc boinc     20817 Jan 14 07:54 stderr.txt
[2026-01-14 07:54:44] HITS file was successfully produced:
[2026-01-14 07:54:44] -rw-------. 1 boinc boinc 148346734 Jan 14 07:50 shared/HITS.pool.root.1
[2026-01-14 07:54:44]  *** Contents of shared directory: ***
[2026-01-14 07:54:44] total 723616
[2026-01-14 07:54:44] -rw-r--r--. 2 boinc boinc 590309803 Jan 14 05:09 ATLAS.root_0
[2026-01-14 07:54:44] -rw-r--r--. 2 boinc boinc     15847 Jan 14 05:09 start_atlas.sh
[2026-01-14 07:54:44] -rw-r--r--. 2 boinc boinc    592397 Jan 14 05:09 input.tar.gz
[2026-01-14 07:54:44] -rw-------. 1 boinc boinc 148346734 Jan 14 07:50 HITS.pool.root.1
[2026-01-14 07:54:44] -rw-------. 1 boinc boinc   1710080 Jan 14 07:54 result.tar.gz
07:54:46 (1826): run_atlas exited; CPU time 32700.194058
07:54:46 (1826): called boinc_finish(0)

</stderr_txt>
]]>

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