Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:16:35 (28020): wrapper (7.7.26015): starting
20:16:35 (28020): wrapper: running run_atlas (--nthreads 8)
[2026-01-13 20:16:35] Arguments: --nthreads 8
[2026-01-13 20:16:35] Threads: 8
[2026-01-13 20:16:35] Checking for CVMFS
[2026-01-13 20:16:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-13 20:16:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-13 20:16:36] Running cvmfs_config stat atlas.cern.ch
[2026-01-13 20:16:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-13 20:16:36] 2.11.4.0 31920 52451 72856 155112 0 57 14284869 18432000 1833 130560 0 25346144 99.991 1681667 38418 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-13 20:16:36] CVMFS is ok
[2026-01-13 20:16:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 20:16:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 20:16:36] Further information can be found at the LHC@home message board.
[2026-01-13 20:16:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 20:16:36] Checking for apptainer binary...
[2026-01-13 20:16:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-13 20:16:36] Running /usr/bin/apptainer --version
[2026-01-13 20:16:36] apptainer version 1.3.2-1.el7
[2026-01-13 20:16:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 20:16:36] c-206-22.aglt2.org
[2026-01-13 20:16:36] apptainer works
[2026-01-13 20:16:36] Set ATHENA_PROC_NUMBER=8
[2026-01-13 20:16:36] Set ATHENA_CORE_NUMBER=8
[2026-01-13 20:16:36] Starting ATLAS job with PandaID=6969270512
[2026-01-13 20:16:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 22:10:03]  *** The last 200 lines of the pilot log: ***
[2026-01-13 22:10:03] 2026-01-14 03:09:40,650 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-13 22:10:03] 2026-01-14 03:09:40,656 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2477.9166666666665
[2026-01-13 22:10:03] 2026-01-14 03:09:40,661 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6969270512/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 22:10:03] 2026-01-14 03:09:40,661 | INFO     | extracted standard info from prmon json
[2026-01-13 22:10:03] 2026-01-14 03:09:40,662 | INFO     | time since job start (6773s) is within the limit (349056.0s)
[2026-01-13 22:10:03] 2026-01-14 03:09:40,662 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 22:10:03] 2026-01-14 03:09:40,662 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 22:10:03] 2026-01-14 03:09:40,663 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 22:10:03] 2026-01-14 03:09:40,663 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 22:10:03] 2026-01-14 03:09:40,666 | INFO     | fitting pss+swap vs Time
[2026-01-13 22:10:03] 2026-01-14 03:09:40,667 | INFO     | sum of square deviations: 424045160.0
[2026-01-13 22:10:03] 2026-01-14 03:09:40,668 | INFO     | sum of deviations: 15781138346.000002
[2026-01-13 22:10:03] 2026-01-14 03:09:40,668 | INFO     | mean x: 1768356784.0
[2026-01-13 22:10:03] 2026-01-14 03:09:40,668 | INFO     | mean y: 2500455.072072072
[2026-01-13 22:10:03] 2026-01-14 03:09:40,668 | INFO     | intersect: -65808138801.82133
[2026-01-13 22:10:03] 2026-01-14 03:09:40,669 | INFO     | chi2: 1.563965362207981
[2026-01-13 22:10:03] 2026-01-14 03:09:40,669 | INFO     | sum of square deviations: 369281342.5
[2026-01-13 22:10:03] 2026-01-14 03:09:40,670 | INFO     | sum of deviations: 15234946023.500002
[2026-01-13 22:10:03] 2026-01-14 03:09:40,670 | INFO     | mean x: 1768356631.5
[2026-01-13 22:10:03] 2026-01-14 03:09:40,670 | INFO     | mean y: 2498933.8018867923
[2026-01-13 22:10:03] 2026-01-14 03:09:40,670 | INFO     | intersect: -72952223470.56866
[2026-01-13 22:10:03] 2026-01-14 03:09:40,671 | INFO     | chi2: 1.565881478533335
[2026-01-13 22:10:03] 2026-01-14 03:09:40,671 | INFO     | current chi2=1.565881478533335 (change=-0.12251654490921095 %)
[2026-01-13 22:10:03] 2026-01-14 03:09:40,671 | INFO     | right removable region: 105
[2026-01-13 22:10:03] 2026-01-14 03:09:40,671 | INFO     | sum of square deviations: 369281342.5
[2026-01-13 22:10:03] 2026-01-14 03:09:40,672 | INFO     | sum of deviations: -2670216226.5
[2026-01-13 22:10:03] 2026-01-14 03:09:40,672 | INFO     | mean x: 1768356936.5
[2026-01-13 22:10:03] 2026-01-14 03:09:40,673 | INFO     | mean y: 2550938.745283019
[2026-01-13 22:10:03] 2026-01-14 03:09:40,673 | INFO     | intersect: 12789266222.326473
[2026-01-13 22:10:03] 2026-01-14 03:09:40,673 | INFO     | chi2: 0.006106843772855821
[2026-01-13 22:10:03] 2026-01-14 03:09:40,673 | INFO     | current chi2=0.006106843772855821 (change=99.6095281954177 %)
[2026-01-13 22:10:03] 2026-01-14 03:09:40,674 | INFO     | sum of square deviations: 319447850.0
[2026-01-13 22:10:03] 2026-01-14 03:09:40,675 | INFO     | sum of deviations: -2845028593.0
[2026-01-13 22:10:03] 2026-01-14 03:09:40,675 | INFO     | mean x: 1768357089.0
[2026-01-13 22:10:03] 2026-01-14 03:09:40,675 | INFO     | mean y: 2551417.4554455443
[2026-01-13 22:10:03] 2026-01-14 03:09:40,675 | INFO     | intersect: 15751683805.853884
[2026-01-13 22:10:03] 2026-01-14 03:09:40,675 | INFO     | chi2: 0.0031473525144648327
[2026-01-13 22:10:03] 2026-01-14 03:09:40,676 | INFO     | current chi2=0.0031473525144648327 (change=48.461879302456815 %)
[2026-01-13 22:10:03] 2026-01-14 03:09:40,676 | INFO     | sum of square deviations: 274312120.0
[2026-01-13 22:10:03] 2026-01-14 03:09:40,677 | INFO     | sum of deviations: -2657944582.0
[2026-01-13 22:10:03] 2026-01-14 03:09:40,677 | INFO     | mean x: 1768357241.5
[2026-01-13 22:10:03] 2026-01-14 03:09:40,677 | INFO     | mean y: 2550786.8541666665
[2026-01-13 22:10:03] 2026-01-14 03:09:40,677 | INFO     | intersect: 17137030842.220987
[2026-01-13 22:10:03] 2026-01-14 03:09:40,678 | INFO     | chi2: 0.0029618156852490203
[2026-01-13 22:10:03] 2026-01-14 03:09:40,678 | INFO     | current chi2=0.0029618156852490203 (change=5.895012661057465 %)
[2026-01-13 22:10:03] 2026-01-14 03:09:40,678 | INFO     | left removable region: 30
[2026-01-13 22:10:03] 2026-01-14 03:09:40,678 | INFO     | sum of square deviations: 130793150.0
[2026-01-13 22:10:03] 2026-01-14 03:09:40,679 | INFO     | sum of deviations: -1834653750.9999998
[2026-01-13 22:10:03] 2026-01-14 03:09:40,679 | INFO     | mean x: 1768357516.0
[2026-01-13 22:10:03] 2026-01-14 03:09:40,679 | INFO     | mean y: 2549494.466666667
[2026-01-13 22:10:03] 2026-01-14 03:09:40,679 | INFO     | intersect: 24807546926.20099
[2026-01-13 22:10:03] 2026-01-14 03:09:40,680 | INFO     | chi2: 0.0022039141970359097
[2026-01-13 22:10:03] 2026-01-14 03:09:40,680 | INFO     | current memory leak: -14.03 B/s (using 75 data points, chi2=0.00)
[2026-01-13 22:10:03] 2026-01-14 03:09:40,680 | INFO     | could have reported an average CPU frequency of 2416 MHz (7 samples)
[2026-01-13 22:10:03] 2026-01-14 03:09:40,681 | INFO     | ..............................
[2026-01-13 22:10:03] 2026-01-14 03:09:40,681 | INFO     | . Timing measurements:
[2026-01-13 22:10:03] 2026-01-14 03:09:40,681 | INFO     | . get job = 0 s
[2026-01-13 22:10:03] 2026-01-14 03:09:40,681 | INFO     | . initial setup = 2 s
[2026-01-13 22:10:03] 2026-01-14 03:09:40,681 | INFO     | . payload setup = 4 s
[2026-01-13 22:10:03] 2026-01-14 03:09:40,681 | INFO     | . stage-in = 0 s
[2026-01-13 22:10:03] 2026-01-14 03:09:40,682 | INFO     | . payload execution = 6742 s
[2026-01-13 22:10:03] 2026-01-14 03:09:40,682 | INFO     | . stage-out = 0 s
[2026-01-13 22:10:03] 2026-01-14 03:09:40,682 | INFO     | . log creation = 0 s
[2026-01-13 22:10:03] 2026-01-14 03:09:40,682 | INFO     | ..............................
[2026-01-13 22:10:03] 2026-01-14 03:09:40,842 | INFO     | 
[2026-01-13 22:10:03] 2026-01-14 03:09:40,842 | INFO     | job summary report
[2026-01-13 22:10:03] 2026-01-14 03:09:40,842 | INFO     | --------------------------------------------------
[2026-01-13 22:10:03] 2026-01-14 03:09:40,842 | INFO     | PanDA job id: 6969270512
[2026-01-13 22:10:03] 2026-01-14 03:09:40,843 | INFO     | task id: 48215263
[2026-01-13 22:10:03] 2026-01-14 03:09:40,843 | INFO     | errors: (none)
[2026-01-13 22:10:03] 2026-01-14 03:09:40,843 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 22:10:03] 2026-01-14 03:09:40,843 | INFO     | pilot state: finished 
[2026-01-13 22:10:03] 2026-01-14 03:09:40,843 | INFO     | transexitcode: 0
[2026-01-13 22:10:03] 2026-01-14 03:09:40,843 | INFO     | exeerrorcode: 0
[2026-01-13 22:10:03] 2026-01-14 03:09:40,844 | INFO     | exeerrordiag: 
[2026-01-13 22:10:03] 2026-01-14 03:09:40,844 | INFO     | exitcode: 0
[2026-01-13 22:10:03] 2026-01-14 03:09:40,844 | INFO     | exitmsg: OK
[2026-01-13 22:10:03] 2026-01-14 03:09:40,844 | INFO     | cpuconsumptiontime: 50616 s
[2026-01-13 22:10:03] 2026-01-14 03:09:40,844 | INFO     | nevents: 400
[2026-01-13 22:10:03] 2026-01-14 03:09:40,844 | INFO     | neventsw: 0
[2026-01-13 22:10:03] 2026-01-14 03:09:40,845 | INFO     | pid: 5903
[2026-01-13 22:10:03] 2026-01-14 03:09:40,845 | INFO     | pgrp: 5903
[2026-01-13 22:10:03] 2026-01-14 03:09:40,845 | INFO     | corecount: 8
[2026-01-13 22:10:03] 2026-01-14 03:09:40,845 | INFO     | event service: False
[2026-01-13 22:10:03] 2026-01-14 03:09:40,845 | INFO     | sizes: {0: 2283773, 1: 2283972, 4: 2284234, 11: 2284262, 6751: 2311461, 6753: 2320459, 6756: 2320643, 6760: 2320837}
[2026-01-13 22:10:03] 2026-01-14 03:09:40,845 | INFO     | --------------------------------------------------
[2026-01-13 22:10:03] 2026-01-14 03:09:40,846 | INFO     | 
[2026-01-13 22:10:03] 2026-01-14 03:09:40,846 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-13 22:10:03] 2026-01-14 03:09:40,861 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 22:10:03] 2026-01-14 03:09:40,862 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 22:10:03] 2026-01-14 03:09:40,862 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 22:10:03] 2026-01-14 03:09:40,862 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 22:10:03] 2026-01-14 03:09:40,862 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 22:10:03] 2026-01-14 03:09:40,862 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 22:10:03] 2026-01-14 03:09:40,863 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 22:10:03] 2026-01-14 03:09:40,863 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 22:10:03] 2026-01-14 03:09:40,863 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 22:10:03] 2026-01-14 03:09:40,863 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 22:10:03] 2026-01-14 03:09:40,863 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 22:10:03] 2026-01-14 03:09:40,864 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 22:10:03] 2026-01-14 03:09:40,864 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 22:10:03] 2026-01-14 03:09:40,864 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 22:10:03] 2026-01-14 03:09:40,864 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 22:10:03] 2026-01-14 03:09:40,864 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 22:10:03] 2026-01-14 03:09:40,864 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 22:10:03] 2026-01-14 03:09:40,865 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 22:10:03] 2026-01-14 03:09:40,865 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 22:10:03] 2026-01-14 03:09:40,865 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 22:10:03] 2026-01-14 03:09:40,865 | INFO     | job 6969270512 has completed (purged errors)
[2026-01-13 22:10:03] 2026-01-14 03:09:40,865 | INFO     | overall cleanup function is called
[2026-01-13 22:10:03] 2026-01-14 03:09:41,873 | INFO     | --- collectZombieJob: --- 10, [5903]
[2026-01-13 22:10:03] 2026-01-14 03:09:41,873 | INFO     | zombie collector waiting for pid 5903
[2026-01-13 22:10:03] 2026-01-14 03:09:41,873 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 22:10:03] 2026-01-14 03:09:41,873 | INFO     | collected zombie processes
[2026-01-13 22:10:03] 2026-01-14 03:09:41,873 | INFO     | will attempt to kill all subprocesses of pid=5903
[2026-01-13 22:10:03] 2026-01-14 03:09:41,983 | INFO     | process IDs to be killed: [5903] (in reverse order)
[2026-01-13 22:10:03] 2026-01-14 03:09:42,030 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 22:10:03] 2026-01-14 03:09:42,030 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 22:10:03] 2026-01-14 03:09:42,033 | INFO     | did not find any defunct processes belonging to 5903
[2026-01-13 22:10:03] 2026-01-14 03:09:42,035 | INFO     | did not find any defunct processes belonging to 5903
[2026-01-13 22:10:03] 2026-01-14 03:09:42,035 | INFO     | ready for new job
[2026-01-13 22:10:03] 2026-01-14 03:09:42,035 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 22:10:03] 2026-01-14 03:09:42,037 | INFO     | ***************************************
[2026-01-13 22:10:03] 2026-01-14 03:09:42,037 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 22:10:03] 2026-01-14 03:09:42,037 | INFO     | ***************************************
[2026-01-13 22:10:03] 2026-01-14 03:09:42,037 | INFO     | 
[2026-01-13 22:10:03] 2026-01-14 03:09:42,038 | INFO     | architecture information:
[2026-01-13 22:10:03] 2026-01-14 03:09:42,038 | INFO     | executing command: cat /etc/os-release
[2026-01-13 22:10:03] 2026-01-14 03:09:42,047 | INFO     | cat /etc/os-release:
[2026-01-13 22:10:03] NAME="CentOS Linux"
[2026-01-13 22:10:03] VERSION="7 (Core)"
[2026-01-13 22:10:03] ID="centos"
[2026-01-13 22:10:03] ID_LIKE="rhel fedora"
[2026-01-13 22:10:03] VERSION_ID="7"
[2026-01-13 22:10:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 22:10:03] ANSI_COLOR="0;31"
[2026-01-13 22:10:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 22:10:03] HOME_URL="https://www.centos.org/"
[2026-01-13 22:10:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 22:10:03] 
[2026-01-13 22:10:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 22:10:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 22:10:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 22:10:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 22:10:03] 
[2026-01-13 22:10:03] 2026-01-14 03:09:42,048 | INFO     | ***************************************
[2026-01-13 22:10:03] 2026-01-14 03:09:42,550 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-13 22:10:03] 2026-01-14 03:09:42,564 | INFO     | sufficient remaining disk space (26077036544 B)
[2026-01-13 22:10:03] 2026-01-14 03:09:42,564 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 22:10:03] 2026-01-14 03:09:42,564 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 22:10:03] 2026-01-14 03:09:42,564 | INFO     | update_server=False
[2026-01-13 22:10:03] 2026-01-14 03:09:42,565 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 22:10:03] 2026-01-14 03:09:42,565 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 22:10:03] 2026-01-14 03:09:42,565 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-13 22:10:03] 2026-01-14 03:09:42,566 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 22:10:03] 2026-01-14 03:09:42,566 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 22:10:03] 2026-01-14 03:09:42,566 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 22:10:03] 2026-01-14 03:09:42,565 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 22:10:03] 2026-01-14 03:09:42,623 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 22:10:03] 2026-01-14 03:09:42,811 | INFO     | all data control threads have been joined
[2026-01-13 22:10:03] 2026-01-14 03:09:43,042 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-13 22:10:03] 2026-01-14 03:09:43,042 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-13 22:10:03] 2026-01-14 03:09:43,042 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 22:10:03] 2026-01-14 03:09:43,042 | INFO     | will abort loop
[2026-01-13 22:10:03] 2026-01-14 03:09:43,567 | INFO     | [job] retrieve thread has finished
[2026-01-13 22:10:03] 2026-01-14 03:09:43,572 | INFO     | [job] queue monitor thread has finished
[2026-01-13 22:10:03] 2026-01-14 03:09:43,595 | INFO     | all payload control threads have been joined
[2026-01-13 22:10:03] 2026-01-14 03:09:43,644 | INFO     | [data] copytool_in thread has finished
[2026-01-13 22:10:03] 2026-01-14 03:09:43,817 | INFO     | [data] control thread has finished
[2026-01-13 22:10:03] 2026-01-14 03:09:43,865 | INFO     | [job] validate thread has finished
[2026-01-13 22:10:03] 2026-01-14 03:09:43,913 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 22:10:03] 2026-01-14 03:09:43,914 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 22:10:03] 2026-01-14 03:09:44,048 | INFO     | [job] job monitor thread has finished
[2026-01-13 22:10:03] 2026-01-14 03:09:44,087 | INFO     | all job control threads have been joined
[2026-01-13 22:10:03] 2026-01-14 03:09:44,152 | INFO     | [payload] validate_post thread has finished
[2026-01-13 22:10:03] 2026-01-14 03:09:44,573 | INFO     | [data] copytool_out thread has finished
[2026-01-13 22:10:03] 2026-01-14 03:09:44,601 | INFO     | [payload] control thread has finished
[2026-01-13 22:10:03] 2026-01-14 03:09:44,837 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 22:10:03] 2026-01-14 03:09:44,939 | INFO     | [payload] failed_post thread has finished
[2026-01-13 22:10:03] 2026-01-14 03:09:44,942 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 22:10:03] 2026-01-14 03:09:45,090 | INFO     | [job] control thread has finished
[2026-01-13 22:10:03] 2026-01-14 03:09:46,630 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 22:10:03] 2026-01-14 03:09:57,625 | INFO     | [monitor] cgroup control has ended
[2026-01-13 22:10:03] 2026-01-14 03:09:58,357 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140009330337600)>', '<ExcThread(monitor, started 140008744806144)>']
[2026-01-13 22:10:03] 2026-01-14 03:09:58,649 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 22:10:03] 2026-01-14 03:09:58,649 | INFO     | [monitor] control thread has ended
[2026-01-13 22:10:03] 2026-01-14 03:10:03,382 | INFO     | all workflow threads have been joined
[2026-01-13 22:10:03] 2026-01-14 03:10:03,383 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 22:10:03] 2026-01-14 03:10:03,383 | INFO     | traces error code: 0
[2026-01-13 22:10:03] 2026-01-14 03:10:03,383 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 22:10:03] 2026-01-14 03:10:03,490 [wrapper] ==== pilot stdout END ====
[2026-01-13 22:10:03] 2026-01-14 03:10:03,492 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 22:10:03] 2026-01-14 03:10:03,494 [wrapper] pilotpid: 31716
[2026-01-13 22:10:03] 2026-01-14 03:10:03,496 [wrapper] Pilot exit status: 0
[2026-01-13 22:10:03] 2026-01-14 03:10:03,505 [wrapper] pandaids: 6969270512
[2026-01-13 22:10:03] 2026-01-14 03:10:03,543 [wrapper] cleanup supervisor_pilot 29571 31717
[2026-01-13 22:10:03] 2026-01-14 03:10:03,545 [wrapper] Test setup, not cleaning
[2026-01-13 22:10:03] 2026-01-14 03:10:03,548 [wrapper] apfmon messages muted
[2026-01-13 22:10:03] 2026-01-14 03:10:03,549 [wrapper] ==== wrapper stdout END ====
[2026-01-13 22:10:03] 2026-01-14 03:10:03,551 [wrapper] ==== wrapper stderr END ====
[2026-01-13 22:10:03]  *** Error codes and diagnostics ***
[2026-01-13 22:10:03]     "exeErrorCode": 0,
[2026-01-13 22:10:03]     "exeErrorDiag": "",
[2026-01-13 22:10:03]     "pilotErrorCode": 0,
[2026-01-13 22:10:03]     "pilotErrorDiag": "",
[2026-01-13 22:10:03]  *** Listing of results directory ***
[2026-01-13 22:10:03] total 738964
[2026-01-13 22:10:03] -rwx------ 1 boincer umatlas     36322 Jan 13 16:59 runpilot2-wrapper.sh
[2026-01-13 22:10:03] -rw-r--r-- 1 boincer umatlas    579449 Jan 13 17:05 pilot3.tar.gz
[2026-01-13 22:10:03] -rw-r--r-- 1 boincer umatlas      5112 Jan 13 17:12 queuedata.json
[2026-01-13 22:10:03] -rw-r--r-- 1 boincer umatlas       100 Jan 13 20:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 22:10:03] -rwxr-xr-x 1 boincer umatlas      7986 Jan 13 20:16 run_atlas
[2026-01-13 22:10:03] -rw-r--r-- 1 boincer umatlas       105 Jan 13 20:16 job.xml
[2026-01-13 22:10:03] -rw-r--r-- 2 boincer umatlas 598142130 Jan 13 20:16 EVNT.32794306._000258.pool.root.1
[2026-01-13 22:10:03] -rw-r--r-- 2 boincer umatlas     15847 Jan 13 20:16 start_atlas.sh
[2026-01-13 22:10:03] drwxrwx--x 2 boincer umatlas      4096 Jan 13 20:16 shared
[2026-01-13 22:10:03] -rw-r--r-- 2 boincer umatlas    592388 Jan 13 20:16 input.tar.gz
[2026-01-13 22:10:03] -rw-r--r-- 1 boincer umatlas         0 Jan 13 20:16 boinc_lockfile
[2026-01-13 22:10:03] -rw-r--r-- 1 boincer umatlas      2504 Jan 13 20:16 pandaJob.out
[2026-01-13 22:10:03] -rw------- 1 boincer umatlas        57 Jan 13 20:16 setup.sh.local
[2026-01-13 22:10:03] -rw------- 1 boincer umatlas    997218 Jan 13 20:16 agis_schedconf.cvmfs.json
[2026-01-13 22:10:03] -rw------- 1 boincer umatlas   1516246 Jan 13 20:16 agis_ddmendpoints.agis.ALL.json
[2026-01-13 22:10:03] drwx------ 5 boincer umatlas      4096 Jan 13 20:16 pilot3
[2026-01-13 22:10:03] -rw-r--r-- 1 boincer umatlas      5950 Jan 13 22:01 init_data.xml
[2026-01-13 22:10:03] -rw------- 1 boincer umatlas        95 Jan 13 22:09 pilot_heartbeat.json
[2026-01-13 22:10:03] -rw------- 1 boincer umatlas 152002705 Jan 13 22:09 HITS.48215263._006432.pool.root.1
[2026-01-13 22:10:03] -rw-r--r-- 1 boincer umatlas       531 Jan 13 22:09 boinc_task_state.xml
[2026-01-13 22:10:03] -rw------- 1 boincer umatlas      1068 Jan 13 22:09 memory_monitor_summary.json
[2026-01-13 22:10:03] -rw------- 1 boincer umatlas    350071 Jan 13 22:09 log.48215263._006432.job.log.tgz.1
[2026-01-13 22:10:03] -rw------- 1 boincer umatlas      7852 Jan 13 22:09 heartbeat.json
[2026-01-13 22:10:03] -rw-r--r-- 1 boincer umatlas      8192 Jan 13 22:09 boinc_mmap_file
[2026-01-13 22:10:03] -rw-r--r-- 1 boincer umatlas        27 Jan 13 22:09 wrapper_checkpoint.txt
[2026-01-13 22:10:03] -rw------- 1 boincer umatlas      4738 Jan 13 22:10 pilotlog.txt
[2026-01-13 22:10:03] -rw------- 1 boincer umatlas    966054 Jan 13 22:10 log.48215263._006432.job.log.1
[2026-01-13 22:10:03] -rw------- 1 boincer umatlas       357 Jan 13 22:10 output.list
[2026-01-13 22:10:03] -rw-r--r-- 1 boincer umatlas       620 Jan 13 22:10 runtime_log
[2026-01-13 22:10:03] -rw------- 1 boincer umatlas   1331200 Jan 13 22:10 result.tar.gz
[2026-01-13 22:10:03] -rw-r--r-- 1 boincer umatlas      9342 Jan 13 22:10 runtime_log.err
[2026-01-13 22:10:03] -rw------- 1 boincer umatlas       658 Jan 13 22:10 FBsKDmab1z8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm0oiKDmSeVEWn.diag
[2026-01-13 22:10:03] -rw-r--r-- 1 boincer umatlas     21002 Jan 13 22:10 stderr.txt
[2026-01-13 22:10:03] HITS file was successfully produced:
[2026-01-13 22:10:03] -rw------- 1 boincer umatlas 152002705 Jan 13 22:09 shared/HITS.pool.root.1
[2026-01-13 22:10:03]  *** Contents of shared directory: ***
[2026-01-13 22:10:03] total 734472
[2026-01-13 22:10:03] -rw-r--r-- 2 boincer umatlas 598142130 Jan 13 20:16 ATLAS.root_0
[2026-01-13 22:10:03] -rw-r--r-- 2 boincer umatlas     15847 Jan 13 20:16 start_atlas.sh
[2026-01-13 22:10:03] -rw-r--r-- 2 boincer umatlas    592388 Jan 13 20:16 input.tar.gz
[2026-01-13 22:10:03] -rw------- 1 boincer umatlas 152002705 Jan 13 22:09 HITS.pool.root.1
[2026-01-13 22:10:03] -rw------- 1 boincer umatlas   1331200 Jan 13 22:10 result.tar.gz
22:10:05 (28020): run_atlas exited; CPU time 50681.522040
22:10:05 (28020): called boinc_finish(0)

</stderr_txt>
]]>

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