Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:08:06 (667390): wrapper (7.7.26015): starting
20:08:06 (667390): wrapper: running run_atlas (--nthreads 10)
[2026-01-13 20:08:06] Arguments: --nthreads 10
[2026-01-13 20:08:06] Threads: 10
[2026-01-13 20:08:06] Checking for CVMFS
[2026-01-13 20:08:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-13 20:08:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-13 20:08:07] Running cvmfs_config stat atlas.cern.ch
[2026-01-13 20:08:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-13 20:08:08] 2.13.3.0 12563 29430 297964 155112 0 496 33651685 40960000 18716 16776704 0 38792873 99.773 19768361 33116 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-13 20:08:08] CVMFS is ok
[2026-01-13 20:08:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 20:08:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 20:08:08] Further information can be found at the LHC@home message board.
[2026-01-13 20:08:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 20:08:08] Checking for apptainer binary...
[2026-01-13 20:08:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-13 20:08:08] Running /usr/bin/apptainer --version
[2026-01-13 20:08:08] apptainer version 1.4.5-2.el9
[2026-01-13 20:08:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 20:08:09] c-211-33-3.aglt2.org
[2026-01-13 20:08:09] apptainer works
[2026-01-13 20:08:09] Set ATHENA_PROC_NUMBER=10
[2026-01-13 20:08:09] Set ATHENA_CORE_NUMBER=10
[2026-01-13 20:08:09] Starting ATLAS job with PandaID=6969268164
[2026-01-13 20:08:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 21:52:39]  *** The last 200 lines of the pilot log: ***
[2026-01-13 21:52:39] 2026-01-14 02:51:36,263 | INFO     | time since job start (6156s) is within the limit (349056.0s)
[2026-01-13 21:52:39] 2026-01-14 02:51:36,263 | INFO     | 6159s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-13 21:52:39] 2026-01-14 02:51:37,258 | INFO     | monitor loop #427: job 0:6969268164 is in state 'finished'
[2026-01-13 21:52:39] 2026-01-14 02:51:37,258 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 21:52:39] 2026-01-14 02:51:38,270 | INFO     | time since job start (6158s) is within the limit (349056.0s)
[2026-01-13 21:52:39] 2026-01-14 02:51:39,806 | INFO     | monitor loop #428: job 0:6969268164 is in state 'finished'
[2026-01-13 21:52:39] 2026-01-14 02:51:39,807 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 21:52:39] 2026-01-14 02:51:40,527 | INFO     | PID=672837 has CPU usage=9.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-13 21:52:39] 2026-01-14 02:51:40,527 | INFO     | .. there are 17 such processes running
[2026-01-13 21:52:39] 2026-01-14 02:51:41,529 | INFO     | time since job start (6161s) is within the limit (349056.0s)
[2026-01-13 21:52:39] 2026-01-14 02:51:42,322 | INFO     | monitor loop #429: job 0:6969268164 is in state 'finished'
[2026-01-13 21:52:39] 2026-01-14 02:51:42,323 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 21:52:39] 2026-01-14 02:51:43,540 | INFO     | time since job start (6163s) is within the limit (349056.0s)
[2026-01-13 21:52:39] 2026-01-14 02:51:44,827 | INFO     | monitor loop #430: job 0:6969268164 is in state 'finished'
[2026-01-13 21:52:39] 2026-01-14 02:51:44,828 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 21:52:39] 2026-01-14 02:51:45,547 | INFO     | time since job start (6165s) is within the limit (349056.0s)
[2026-01-13 21:52:39] 2026-01-14 02:51:47,332 | INFO     | monitor loop #431: job 0:6969268164 is in state 'finished'
[2026-01-13 21:52:39] 2026-01-14 02:51:47,333 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 21:52:39] 2026-01-14 02:51:47,559 | INFO     | time since job start (6167s) is within the limit (349056.0s)
[2026-01-13 21:52:39] 2026-01-14 02:51:49,567 | INFO     | time since job start (6169s) is within the limit (349056.0s)
[2026-01-13 21:52:39] 2026-01-14 02:51:49,841 | INFO     | monitor loop #432: job 0:6969268164 is in state 'finished'
[2026-01-13 21:52:39] 2026-01-14 02:51:49,842 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 21:52:39] 2026-01-14 02:51:51,577 | INFO     | time since job start (6171s) is within the limit (349056.0s)
[2026-01-13 21:52:39] 2026-01-14 02:51:52,346 | INFO     | monitor loop #433: job 0:6969268164 is in state 'finished'
[2026-01-13 21:52:39] 2026-01-14 02:51:52,347 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 21:52:39] 2026-01-14 02:51:53,583 | INFO     | time since job start (6173s) is within the limit (349056.0s)
[2026-01-13 21:52:39] 2026-01-14 02:51:54,859 | INFO     | monitor loop #434: job 0:6969268164 is in state 'finished'
[2026-01-13 21:52:39] 2026-01-14 02:51:54,859 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 21:52:39] 2026-01-14 02:51:55,593 | INFO     | time since job start (6175s) is within the limit (349056.0s)
[2026-01-13 21:52:39] 2026-01-14 02:51:57,364 | INFO     | monitor loop #435: job 0:6969268164 is in state 'finished'
[2026-01-13 21:52:39] 2026-01-14 02:51:57,367 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 21:52:39] 2026-01-14 02:51:57,599 | INFO     | time since job start (6177s) is within the limit (349056.0s)
[2026-01-13 21:52:39] 2026-01-14 02:51:59,611 | INFO     | time since job start (6179s) is within the limit (349056.0s)
[2026-01-13 21:52:39] 2026-01-14 02:51:59,872 | INFO     | monitor loop #436: job 0:6969268164 is in state 'finished'
[2026-01-13 21:52:39] 2026-01-14 02:51:59,872 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 21:52:39] 2026-01-14 02:52:01,242 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-13 21:52:39] 2026-01-14 02:52:01,304 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2708.453416666668
[2026-01-13 21:52:39] 2026-01-14 02:52:01,392 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6969268164/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 21:52:39] 2026-01-14 02:52:01,393 | INFO     | extracted standard info from prmon json
[2026-01-13 21:52:39] 2026-01-14 02:52:01,393 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 21:52:39] 2026-01-14 02:52:01,393 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 21:52:39] 2026-01-14 02:52:01,394 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 21:52:39] 2026-01-14 02:52:01,394 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 21:52:39] 2026-01-14 02:52:01,412 | INFO     | fitting pss+swap vs Time
[2026-01-13 21:52:39] 2026-01-14 02:52:01,412 | INFO     | sum of square deviations: 241471043.7391305
[2026-01-13 21:52:39] 2026-01-14 02:52:01,413 | INFO     | sum of deviations: 8786726816.869564
[2026-01-13 21:52:39] 2026-01-14 02:52:01,413 | INFO     | mean x: 1768356142.7391305
[2026-01-13 21:52:39] 2026-01-14 02:52:01,413 | INFO     | mean y: 2619066.3695652173
[2026-01-13 21:52:39] 2026-01-14 02:52:01,413 | INFO     | intersect: -64344898965.51605
[2026-01-13 21:52:39] 2026-01-14 02:52:01,413 | INFO     | chi2: 0.24694058488053267
[2026-01-13 21:52:39] 2026-01-14 02:52:01,413 | INFO     | current memory leak: 36.39 B/s (using 92 data points, chi2=0.25)
[2026-01-13 21:52:39] 2026-01-14 02:52:01,414 | INFO     | could have reported an average CPU frequency of 2726 MHz (7 samples)
[2026-01-13 21:52:39] 2026-01-14 02:52:01,414 | INFO     | ..............................
[2026-01-13 21:52:39] 2026-01-14 02:52:01,414 | INFO     | . Timing measurements:
[2026-01-13 21:52:39] 2026-01-14 02:52:01,414 | INFO     | . get job = 0 s
[2026-01-13 21:52:39] 2026-01-14 02:52:01,414 | INFO     | . initial setup = 3 s
[2026-01-13 21:52:39] 2026-01-14 02:52:01,414 | INFO     | . payload setup = 35 s
[2026-01-13 21:52:39] 2026-01-14 02:52:01,414 | INFO     | . stage-in = 0 s
[2026-01-13 21:52:39] 2026-01-14 02:52:01,434 | INFO     | . payload execution = 6045 s
[2026-01-13 21:52:39] 2026-01-14 02:52:01,434 | INFO     | . stage-out = 2 s
[2026-01-13 21:52:39] 2026-01-14 02:52:01,434 | INFO     | . log creation = 0 s
[2026-01-13 21:52:39] 2026-01-14 02:52:01,434 | INFO     | ..............................
[2026-01-13 21:52:39] 2026-01-14 02:52:01,703 | INFO     | time since job start (6181s) is within the limit (349056.0s)
[2026-01-13 21:52:39] 2026-01-14 02:52:02,052 | INFO     | 
[2026-01-13 21:52:39] 2026-01-14 02:52:02,053 | INFO     | job summary report
[2026-01-13 21:52:39] 2026-01-14 02:52:02,053 | INFO     | --------------------------------------------------
[2026-01-13 21:52:39] 2026-01-14 02:52:02,053 | INFO     | PanDA job id: 6969268164
[2026-01-13 21:52:39] 2026-01-14 02:52:02,053 | INFO     | task id: 48215263
[2026-01-13 21:52:39] 2026-01-14 02:52:02,053 | INFO     | errors: (none)
[2026-01-13 21:52:39] 2026-01-14 02:52:02,053 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 21:52:39] 2026-01-14 02:52:02,053 | INFO     | pilot state: finished 
[2026-01-13 21:52:39] 2026-01-14 02:52:02,053 | INFO     | transexitcode: 0
[2026-01-13 21:52:39] 2026-01-14 02:52:02,053 | INFO     | exeerrorcode: 0
[2026-01-13 21:52:39] 2026-01-14 02:52:02,053 | INFO     | exeerrordiag: 
[2026-01-13 21:52:39] 2026-01-14 02:52:02,054 | INFO     | exitcode: 0
[2026-01-13 21:52:39] 2026-01-14 02:52:02,054 | INFO     | exitmsg: OK
[2026-01-13 21:52:39] 2026-01-14 02:52:02,054 | INFO     | cpuconsumptiontime: 25852 s
[2026-01-13 21:52:39] 2026-01-14 02:52:02,054 | INFO     | nevents: 400
[2026-01-13 21:52:39] 2026-01-14 02:52:02,054 | INFO     | neventsw: 0
[2026-01-13 21:52:39] 2026-01-14 02:52:02,054 | INFO     | pid: 688551
[2026-01-13 21:52:39] 2026-01-14 02:52:02,054 | INFO     | pgrp: 688551
[2026-01-13 21:52:39] 2026-01-14 02:52:02,054 | INFO     | corecount: 10
[2026-01-13 21:52:39] 2026-01-14 02:52:02,054 | INFO     | event service: False
[2026-01-13 21:52:39] 2026-01-14 02:52:02,054 | INFO     | sizes: {0: 2283718, 1: 2283973, 2: 2284001, 13: 2284001, 23: 2284057, 25: 2284347, 34: 2284503, 6085: 2311441, 6086: 2311440, 6090: 2320494, 6092: 2320550, 6122: 2
[2026-01-13 21:52:39] 2026-01-14 02:52:02,054 | INFO     | --------------------------------------------------
[2026-01-13 21:52:39] 2026-01-14 02:52:02,058 | INFO     | 
[2026-01-13 21:52:39] 2026-01-14 02:52:02,059 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-13 21:52:39] 2026-01-14 02:52:02,112 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 21:52:39] 2026-01-14 02:52:02,112 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 21:52:39] 2026-01-14 02:52:02,112 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 21:52:39] 2026-01-14 02:52:02,112 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 21:52:39] 2026-01-14 02:52:02,112 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 21:52:39] 2026-01-14 02:52:02,112 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 21:52:39] 2026-01-14 02:52:02,112 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 21:52:39] 2026-01-14 02:52:02,113 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 21:52:39] 2026-01-14 02:52:02,113 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 21:52:39] 2026-01-14 02:52:02,113 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 21:52:39] 2026-01-14 02:52:02,113 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 21:52:39] 2026-01-14 02:52:02,113 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 21:52:39] 2026-01-14 02:52:02,113 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 21:52:39] 2026-01-14 02:52:02,113 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 21:52:39] 2026-01-14 02:52:02,113 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 21:52:39] 2026-01-14 02:52:02,113 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 21:52:39] 2026-01-14 02:52:02,113 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 21:52:39] 2026-01-14 02:52:02,113 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 21:52:39] 2026-01-14 02:52:02,113 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 21:52:39] 2026-01-14 02:52:02,113 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 21:52:39] 2026-01-14 02:52:02,114 | INFO     | job 6969268164 has completed (purged errors)
[2026-01-13 21:52:39] 2026-01-14 02:52:02,114 | INFO     | overall cleanup function is called
[2026-01-13 21:52:39] 2026-01-14 02:52:03,126 | INFO     | --- collectZombieJob: --- 10, [688551]
[2026-01-13 21:52:39] 2026-01-14 02:52:03,127 | INFO     | zombie collector waiting for pid 688551
[2026-01-13 21:52:39] 2026-01-14 02:52:03,127 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 21:52:39] 2026-01-14 02:52:03,127 | INFO     | collected zombie processes
[2026-01-13 21:52:39] 2026-01-14 02:52:03,127 | INFO     | will attempt to kill all subprocesses of pid=688551
[2026-01-13 21:52:39] 2026-01-14 02:52:04,688 | INFO     | PID=672837 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-13 21:52:39] 2026-01-14 02:52:04,689 | INFO     | .. there are 17 such processes running
[2026-01-13 21:52:39] 2026-01-14 02:52:04,792 | INFO     | process IDs to be killed: [688551] (in reverse order)
[2026-01-13 21:52:39] 2026-01-14 02:52:05,039 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 21:52:39] 2026-01-14 02:52:05,039 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 21:52:39] 2026-01-14 02:52:05,063 | INFO     | did not find any defunct processes belonging to 688551
[2026-01-13 21:52:39] 2026-01-14 02:52:05,099 | INFO     | did not find any defunct processes belonging to 688551
[2026-01-13 21:52:39] 2026-01-14 02:52:05,100 | INFO     | ready for new job
[2026-01-13 21:52:39] 2026-01-14 02:52:05,100 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 21:52:39] 2026-01-14 02:52:05,101 | INFO     | ***************************************
[2026-01-13 21:52:39] 2026-01-14 02:52:05,101 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 21:52:39] 2026-01-14 02:52:05,101 | INFO     | ***************************************
[2026-01-13 21:52:39] 2026-01-14 02:52:05,102 | INFO     | 
[2026-01-13 21:52:39] 2026-01-14 02:52:05,123 | INFO     | architecture information:
[2026-01-13 21:52:39] 2026-01-14 02:52:05,123 | INFO     | executing command: cat /etc/os-release
[2026-01-13 21:52:39] 2026-01-14 02:52:05,230 | INFO     | cat /etc/os-release:
[2026-01-13 21:52:39] NAME="CentOS Linux"
[2026-01-13 21:52:39] VERSION="7 (Core)"
[2026-01-13 21:52:39] ID="centos"
[2026-01-13 21:52:39] ID_LIKE="rhel fedora"
[2026-01-13 21:52:39] VERSION_ID="7"
[2026-01-13 21:52:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 21:52:39] ANSI_COLOR="0;31"
[2026-01-13 21:52:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 21:52:39] HOME_URL="https://www.centos.org/"
[2026-01-13 21:52:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 21:52:39] 
[2026-01-13 21:52:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 21:52:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 21:52:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 21:52:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 21:52:39] 
[2026-01-13 21:52:39] 2026-01-14 02:52:05,230 | INFO     | ***************************************
[2026-01-13 21:52:39] 2026-01-14 02:52:05,734 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-13 21:52:39] 2026-01-14 02:52:05,777 | INFO     | sufficient remaining disk space (122807123968 B)
[2026-01-13 21:52:39] 2026-01-14 02:52:05,777 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 21:52:39] 2026-01-14 02:52:05,777 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 21:52:39] 2026-01-14 02:52:05,777 | INFO     | update_server=False
[2026-01-13 21:52:39] 2026-01-14 02:52:05,777 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 21:52:39] 2026-01-14 02:52:05,780 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 21:52:39] 2026-01-14 02:52:05,781 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 21:52:39] 2026-01-14 02:52:05,913 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 21:52:39] 2026-01-14 02:52:05,914 | INFO     | aborting loop
[2026-01-13 21:52:39] 2026-01-14 02:52:05,989 | INFO     | all job control threads have been joined
[2026-01-13 21:52:39] 2026-01-14 02:52:06,283 | INFO     | all data control threads have been joined
[2026-01-13 21:52:39] 2026-01-14 02:52:06,332 | INFO     | all payload control threads have been joined
[2026-01-13 21:52:39] 2026-01-14 02:52:06,784 | INFO     | [job] retrieve thread has finished
[2026-01-13 21:52:39] 2026-01-14 02:52:06,920 | INFO     | [job] job monitor thread has finished
[2026-01-13 21:52:39] 2026-01-14 02:52:06,997 | INFO     | [job] control thread has finished
[2026-01-13 21:52:39] 2026-01-14 02:52:07,004 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 21:52:39] 2026-01-14 02:52:07,018 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 21:52:39] 2026-01-14 02:52:07,145 | INFO     | [job] validate thread has finished
[2026-01-13 21:52:39] 2026-01-14 02:52:07,166 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 21:52:39] 2026-01-14 02:52:07,179 | INFO     | [payload] validate_post thread has finished
[2026-01-13 21:52:39] 2026-01-14 02:52:07,289 | INFO     | [data] control thread has finished
[2026-01-13 21:52:39] 2026-01-14 02:52:07,339 | INFO     | [payload] control thread has finished
[2026-01-13 21:52:39] 2026-01-14 02:52:07,417 | INFO     | [payload] failed_post thread has finished
[2026-01-13 21:52:39] 2026-01-14 02:52:07,690 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 21:52:39] 2026-01-14 02:52:07,787 | INFO     | [data] copytool_out thread has finished
[2026-01-13 21:52:39] 2026-01-14 02:52:07,993 | INFO     | [data] copytool_in thread has finished
[2026-01-13 21:52:39] 2026-01-14 02:52:08,026 | INFO     | [job] queue monitor thread has finished
[2026-01-13 21:52:39] 2026-01-14 02:52:08,237 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 21:52:39] 2026-01-14 02:52:09,791 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 21:52:39] 2026-01-14 02:52:10,473 | INFO     | [monitor] cgroup control has ended
[2026-01-13 21:52:39] 2026-01-14 02:52:10,711 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140145311659840)>', '<ExcThread(monitor, started 140144959014656)>']
[2026-01-13 21:52:39] 2026-01-14 02:52:15,736 | INFO     | all workflow threads have been joined
[2026-01-13 21:52:39] 2026-01-14 02:52:15,737 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 21:52:39] 2026-01-14 02:52:15,737 | INFO     | traces error code: 0
[2026-01-13 21:52:39] 2026-01-14 02:52:15,737 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 21:52:39] 2026-01-14 02:52:38,370 | INFO     | PID=672837 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-13 21:52:39] 2026-01-14 02:52:38,370 | INFO     | .. there are 17 such processes running
[2026-01-13 21:52:39] 2026-01-14 02:52:38,371 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 21:52:39] 2026-01-14 02:52:38,371 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 21:52:39] 2026-01-14 02:52:38,371 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 21:52:39] 2026-01-14 02:52:38,371 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 21:52:39] 2026-01-14 02:52:38,371 | INFO     | [monitor] control thread has ended
[2026-01-13 21:52:39] 2026-01-14 02:52:38,883 [wrapper] ==== pilot stdout END ====
[2026-01-13 21:52:39] 2026-01-14 02:52:38,886 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 21:52:39] 2026-01-14 02:52:38,889 [wrapper] pilotpid: 672837
[2026-01-13 21:52:39] 2026-01-14 02:52:38,891 [wrapper] Pilot exit status: 0
[2026-01-13 21:52:39] 2026-01-14 02:52:38,943 [wrapper] pandaids: 6969268164
[2026-01-13 21:52:39] 2026-01-14 02:52:39,029 [wrapper] cleanup supervisor_pilot 1001564 672838
[2026-01-13 21:52:39] 2026-01-14 02:52:39,032 [wrapper] Test setup, not cleaning
[2026-01-13 21:52:39] 2026-01-14 02:52:39,041 [wrapper] apfmon messages muted
[2026-01-13 21:52:39] 2026-01-14 02:52:39,080 [wrapper] ==== wrapper stdout END ====
[2026-01-13 21:52:39] 2026-01-14 02:52:39,094 [wrapper] ==== wrapper stderr END ====
[2026-01-13 21:52:39]  *** Error codes and diagnostics ***
[2026-01-13 21:52:39]     "exeErrorCode": 0,
[2026-01-13 21:52:39]     "exeErrorDiag": "",
[2026-01-13 21:52:39]     "pilotErrorCode": 0,
[2026-01-13 21:52:39]     "pilotErrorDiag": "",
[2026-01-13 21:52:39]  *** Listing of results directory ***
[2026-01-13 21:52:39] total 737852
[2026-01-13 21:52:39] -rwx------. 1 boincer umatlas     36322 Jan 13 16:59 runpilot2-wrapper.sh
[2026-01-13 21:52:39] -rw-r--r--. 1 boincer umatlas    579449 Jan 13 17:05 pilot3.tar.gz
[2026-01-13 21:52:39] -rw-r--r--. 1 boincer umatlas      5112 Jan 13 17:12 queuedata.json
[2026-01-13 21:52:39] -rw-r--r--. 1 boincer umatlas       100 Jan 13 20:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 21:52:39] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 13 20:08 run_atlas
[2026-01-13 21:52:39] -rw-r--r--. 1 boincer umatlas       105 Jan 13 20:08 job.xml
[2026-01-13 21:52:39] -rw-r--r--. 2 boincer umatlas 597017375 Jan 13 20:08 EVNT.32794306._000233.pool.root.1
[2026-01-13 21:52:39] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 20:08 start_atlas.sh
[2026-01-13 21:52:39] drwxrwx--x. 2 boincer umatlas      4096 Jan 13 20:08 shared
[2026-01-13 21:52:39] -rw-r--r--. 2 boincer umatlas    592393 Jan 13 20:08 input.tar.gz
[2026-01-13 21:52:39] -rw-r--r--. 1 boincer umatlas         0 Jan 13 20:08 boinc_lockfile
[2026-01-13 21:52:39] -rw-r--r--. 1 boincer umatlas      2505 Jan 13 20:08 pandaJob.out
[2026-01-13 21:52:39] -rw-------. 1 boincer umatlas        57 Jan 13 20:08 setup.sh.local
[2026-01-13 21:52:39] -rw-------. 1 boincer umatlas    997218 Jan 13 20:08 agis_schedconf.cvmfs.json
[2026-01-13 21:52:39] -rw-------. 1 boincer umatlas   1516246 Jan 13 20:08 agis_ddmendpoints.agis.ALL.json
[2026-01-13 21:52:39] drwx------. 5 boincer umatlas      4096 Jan 13 20:09 pilot3
[2026-01-13 21:52:39] -rw-r--r--. 1 boincer umatlas      6859 Jan 13 21:49 init_data.xml
[2026-01-13 21:52:39] -rw-------. 1 boincer umatlas 152177320 Jan 13 21:50 HITS.48215263._005808.pool.root.1
[2026-01-13 21:52:39] -rw-r--r--. 1 boincer umatlas       530 Jan 13 21:50 boinc_task_state.xml
[2026-01-13 21:52:39] -rw-------. 1 boincer umatlas      1057 Jan 13 21:51 memory_monitor_summary.json
[2026-01-13 21:52:39] -rw-------. 1 boincer umatlas    370336 Jan 13 21:51 log.48215263._005808.job.log.tgz.1
[2026-01-13 21:52:39] -rw-------. 1 boincer umatlas        95 Jan 13 21:51 pilot_heartbeat.json
[2026-01-13 21:52:39] -rw-------. 1 boincer umatlas      7826 Jan 13 21:52 heartbeat.json
[2026-01-13 21:52:39] -rw-r--r--. 1 boincer umatlas      8192 Jan 13 21:52 boinc_mmap_file
[2026-01-13 21:52:39] -rw-r--r--. 1 boincer umatlas        27 Jan 13 21:52 wrapper_checkpoint.txt
[2026-01-13 21:52:39] -rw-------. 1 boincer umatlas       822 Jan 13 21:52 pilotlog.txt
[2026-01-13 21:52:39] -rw-------. 1 boincer umatlas    849789 Jan 13 21:52 log.48215263._005808.job.log.1
[2026-01-13 21:52:39] -rw-------. 1 boincer umatlas       357 Jan 13 21:52 output.list
[2026-01-13 21:52:39] -rw-r--r--. 1 boincer umatlas       620 Jan 13 21:52 runtime_log
[2026-01-13 21:52:39] -rw-------. 1 boincer umatlas   1239040 Jan 13 21:52 result.tar.gz
[2026-01-13 21:52:39] -rw-r--r--. 1 boincer umatlas      9354 Jan 13 21:52 runtime_log.err
[2026-01-13 21:52:39] -rw-------. 1 boincer umatlas       654 Jan 13 21:52 CsHKDm8a1z8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmqkiKDmcvCCfn.diag
[2026-01-13 21:52:39] -rw-r--r--. 1 boincer umatlas     22515 Jan 13 21:52 stderr.txt
[2026-01-13 21:52:39] HITS file was successfully produced:
[2026-01-13 21:52:39] -rw-------. 1 boincer umatlas 152177320 Jan 13 21:50 shared/HITS.pool.root.1
[2026-01-13 21:52:39]  *** Contents of shared directory: ***
[2026-01-13 21:52:39] total 733456
[2026-01-13 21:52:39] -rw-r--r--. 2 boincer umatlas 597017375 Jan 13 20:08 ATLAS.root_0
[2026-01-13 21:52:39] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 20:08 start_atlas.sh
[2026-01-13 21:52:39] -rw-r--r--. 2 boincer umatlas    592393 Jan 13 20:08 input.tar.gz
[2026-01-13 21:52:39] -rw-------. 1 boincer umatlas 152177320 Jan 13 21:50 HITS.pool.root.1
[2026-01-13 21:52:39] -rw-------. 1 boincer umatlas   1239040 Jan 13 21:52 result.tar.gz
21:52:41 (667390): run_atlas exited; CPU time 26064.845249
21:52:41 (667390): called boinc_finish(0)

</stderr_txt>
]]>

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