Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:53:04 (3713838): wrapper (7.7.26015): starting
19:53:04 (3713838): wrapper: running run_atlas (--nthreads 8)
[2026-01-13 19:53:04] Arguments: --nthreads 8
[2026-01-13 19:53:04] Threads: 8
[2026-01-13 19:53:04] Checking for CVMFS
[2026-01-13 19:53:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-13 19:53:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-13 19:53:05] Running cvmfs_config stat atlas.cern.ch
[2026-01-13 19:53:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-13 19:53:06] 2.13.3.0 10955 29415 276104 155112 0 550 37794901 40960000 24447 16776704 0 39515035 99.766 24542767 38222 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-13 19:53:06] CVMFS is ok
[2026-01-13 19:53:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 19:53:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 19:53:06] Further information can be found at the LHC@home message board.
[2026-01-13 19:53:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 19:53:06] Checking for apptainer binary...
[2026-01-13 19:53:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-13 19:53:06] Running /usr/bin/apptainer --version
[2026-01-13 19:53:06] apptainer version 1.4.5-2.el9
[2026-01-13 19:53:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 19:53:06] c-211-33-1.aglt2.org
[2026-01-13 19:53:06] apptainer works
[2026-01-13 19:53:06] Set ATHENA_PROC_NUMBER=8
[2026-01-13 19:53:06] Set ATHENA_CORE_NUMBER=8
[2026-01-13 19:53:06] Starting ATLAS job with PandaID=6969262154
[2026-01-13 19:53:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 21:17:40]  *** The last 200 lines of the pilot log: ***
[2026-01-13 21:17:40] 2026-01-14 02:16:26,845 | INFO     | time since job start (4983s) is within the limit (349056.0s)
[2026-01-13 21:17:40] 2026-01-14 02:16:27,349 | WARNING  | process 3728639 can no longer be monitored (due to stat problems) - aborting
[2026-01-13 21:17:40] 2026-01-14 02:16:27,358 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6969262154/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 21:17:40] 2026-01-14 02:16:28,858 | INFO     | time since job start (4985s) is within the limit (349056.0s)
[2026-01-13 21:17:40] 2026-01-14 02:16:29,500 | INFO     | number of running child processes to parent process 3728639: 1
[2026-01-13 21:17:40] 2026-01-14 02:16:29,500 | INFO     | maximum number of monitored processes: 6
[2026-01-13 21:17:40] 2026-01-14 02:16:30,865 | INFO     | time since job start (4987s) is within the limit (349056.0s)
[2026-01-13 21:17:40] 2026-01-14 02:16:32,005 | INFO     | monitor loop #341: job 0:6969262154 is in state 'finished'
[2026-01-13 21:17:40] 2026-01-14 02:16:32,005 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 21:17:40] 2026-01-14 02:16:32,874 | INFO     | time since job start (4989s) is within the limit (349056.0s)
[2026-01-13 21:17:40] 2026-01-14 02:16:34,513 | INFO     | monitor loop #342: job 0:6969262154 is in state 'finished'
[2026-01-13 21:17:40] 2026-01-14 02:16:34,513 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 21:17:40] 2026-01-14 02:16:34,883 | INFO     | time since job start (4991s) is within the limit (349056.0s)
[2026-01-13 21:17:40] 2026-01-14 02:16:37,027 | INFO     | monitor loop #343: job 0:6969262154 is in state 'finished'
[2026-01-13 21:17:40] 2026-01-14 02:16:37,027 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 21:17:40] 2026-01-14 02:16:37,100 | INFO     | PID=3720927 has CPU usage=10.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-13 21:17:40] 2026-01-14 02:16:37,100 | INFO     | .. there are 26 such processes running
[2026-01-13 21:17:40] 2026-01-14 02:16:38,104 | INFO     | time since job start (4995s) is within the limit (349056.0s)
[2026-01-13 21:17:40] 2026-01-14 02:16:39,532 | INFO     | monitor loop #344: job 0:6969262154 is in state 'finished'
[2026-01-13 21:17:40] 2026-01-14 02:16:39,532 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 21:17:40] 2026-01-14 02:16:40,111 | INFO     | time since job start (4997s) is within the limit (349056.0s)
[2026-01-13 21:17:40] 2026-01-14 02:16:42,039 | INFO     | monitor loop #345: job 0:6969262154 is in state 'finished'
[2026-01-13 21:17:40] 2026-01-14 02:16:42,039 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 21:17:40] 2026-01-14 02:16:42,123 | INFO     | time since job start (4999s) is within the limit (349056.0s)
[2026-01-13 21:17:40] 2026-01-14 02:16:44,130 | INFO     | time since job start (5001s) is within the limit (349056.0s)
[2026-01-13 21:17:40] 2026-01-14 02:16:44,546 | INFO     | monitor loop #346: job 0:6969262154 is in state 'finished'
[2026-01-13 21:17:40] 2026-01-14 02:16:44,546 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 21:17:40] 2026-01-14 02:16:46,136 | INFO     | time since job start (5003s) is within the limit (349056.0s)
[2026-01-13 21:17:40] 2026-01-14 02:16:47,058 | INFO     | monitor loop #347: job 0:6969262154 is in state 'finished'
[2026-01-13 21:17:40] 2026-01-14 02:16:47,058 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 21:17:40] 2026-01-14 02:16:48,151 | INFO     | time since job start (5005s) is within the limit (349056.0s)
[2026-01-13 21:17:40] 2026-01-14 02:16:49,579 | INFO     | monitor loop #348: job 0:6969262154 is in state 'finished'
[2026-01-13 21:17:40] 2026-01-14 02:16:49,579 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 21:17:40] 2026-01-14 02:16:50,158 | INFO     | time since job start (5007s) is within the limit (349056.0s)
[2026-01-13 21:17:40] 2026-01-14 02:16:52,087 | INFO     | monitor loop #349: job 0:6969262154 is in state 'finished'
[2026-01-13 21:17:40] 2026-01-14 02:16:52,087 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 21:17:40] 2026-01-14 02:16:52,165 | INFO     | time since job start (5009s) is within the limit (349056.0s)
[2026-01-13 21:17:40] 2026-01-14 02:16:54,172 | INFO     | time since job start (5011s) is within the limit (349056.0s)
[2026-01-13 21:17:40] 2026-01-14 02:16:54,452 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-13 21:17:40] 2026-01-14 02:16:54,477 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2698.8088854166667
[2026-01-13 21:17:40] 2026-01-14 02:16:54,513 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6969262154/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 21:17:40] 2026-01-14 02:16:54,514 | INFO     | extracted standard info from prmon json
[2026-01-13 21:17:40] 2026-01-14 02:16:54,514 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 21:17:40] 2026-01-14 02:16:54,514 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 21:17:40] 2026-01-14 02:16:54,515 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 21:17:40] 2026-01-14 02:16:54,515 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 21:17:40] 2026-01-14 02:16:54,521 | INFO     | fitting pss+swap vs Time
[2026-01-13 21:17:40] 2026-01-14 02:16:54,521 | INFO     | sum of square deviations: 125642834.01351355
[2026-01-13 21:17:40] 2026-01-14 02:16:54,521 | INFO     | sum of deviations: -2983209285.9189186
[2026-01-13 21:17:40] 2026-01-14 02:16:54,521 | INFO     | mean x: 1768354568.5810812
[2026-01-13 21:17:40] 2026-01-14 02:16:54,521 | INFO     | mean y: 2585298.4864864866
[2026-01-13 21:17:40] 2026-01-14 02:16:54,522 | INFO     | intersect: 41989633833.39004
[2026-01-13 21:17:40] 2026-01-14 02:16:54,522 | INFO     | chi2: 0.011799378446998906
[2026-01-13 21:17:40] 2026-01-14 02:16:54,522 | INFO     | current memory leak: -23.74 B/s (using 74 data points, chi2=0.01)
[2026-01-13 21:17:40] 2026-01-14 02:16:54,522 | INFO     | could have reported an average CPU frequency of 2706 MHz (6 samples)
[2026-01-13 21:17:40] 2026-01-14 02:16:54,522 | INFO     | ..............................
[2026-01-13 21:17:40] 2026-01-14 02:16:54,522 | INFO     | . Timing measurements:
[2026-01-13 21:17:40] 2026-01-14 02:16:54,523 | INFO     | . get job = 0 s
[2026-01-13 21:17:40] 2026-01-14 02:16:54,523 | INFO     | . initial setup = 3 s
[2026-01-13 21:17:40] 2026-01-14 02:16:54,523 | INFO     | . payload setup = 7 s
[2026-01-13 21:17:40] 2026-01-14 02:16:54,523 | INFO     | . stage-in = 0 s
[2026-01-13 21:17:40] 2026-01-14 02:16:54,523 | INFO     | . payload execution = 4946 s
[2026-01-13 21:17:40] 2026-01-14 02:16:54,523 | INFO     | . stage-out = 1 s
[2026-01-13 21:17:40] 2026-01-14 02:16:54,523 | INFO     | . log creation = 0 s
[2026-01-13 21:17:40] 2026-01-14 02:16:54,523 | INFO     | ..............................
[2026-01-13 21:17:40] 2026-01-14 02:16:54,619 | INFO     | 
[2026-01-13 21:17:40] 2026-01-14 02:16:54,619 | INFO     | job summary report
[2026-01-13 21:17:40] 2026-01-14 02:16:54,619 | INFO     | --------------------------------------------------
[2026-01-13 21:17:40] 2026-01-14 02:16:54,619 | INFO     | PanDA job id: 6969262154
[2026-01-13 21:17:40] 2026-01-14 02:16:54,619 | INFO     | task id: 48215263
[2026-01-13 21:17:40] 2026-01-14 02:16:54,619 | INFO     | errors: (none)
[2026-01-13 21:17:40] 2026-01-14 02:16:54,619 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 21:17:40] 2026-01-14 02:16:54,619 | INFO     | pilot state: finished 
[2026-01-13 21:17:40] 2026-01-14 02:16:54,619 | INFO     | transexitcode: 0
[2026-01-13 21:17:40] 2026-01-14 02:16:54,619 | INFO     | exeerrorcode: 0
[2026-01-13 21:17:40] 2026-01-14 02:16:54,619 | INFO     | exeerrordiag: 
[2026-01-13 21:17:40] 2026-01-14 02:16:54,620 | INFO     | exitcode: 0
[2026-01-13 21:17:40] 2026-01-14 02:16:54,620 | INFO     | exitmsg: OK
[2026-01-13 21:17:40] 2026-01-14 02:16:54,620 | INFO     | cpuconsumptiontime: 26220 s
[2026-01-13 21:17:40] 2026-01-14 02:16:54,620 | INFO     | nevents: 400
[2026-01-13 21:17:40] 2026-01-14 02:16:54,620 | INFO     | neventsw: 0
[2026-01-13 21:17:40] 2026-01-14 02:16:54,620 | INFO     | pid: 3728639
[2026-01-13 21:17:40] 2026-01-14 02:16:54,620 | INFO     | pgrp: 3728639
[2026-01-13 21:17:40] 2026-01-14 02:16:54,620 | INFO     | corecount: 8
[2026-01-13 21:17:40] 2026-01-14 02:16:54,620 | INFO     | event service: False
[2026-01-13 21:17:40] 2026-01-14 02:16:54,620 | INFO     | sizes: {0: 2283774, 1: 2283973, 9: 2284235, 12: 2284263, 4957: 2310683, 4959: 2319681, 4962: 2319865, 4990: 2320059}
[2026-01-13 21:17:40] 2026-01-14 02:16:54,620 | INFO     | --------------------------------------------------
[2026-01-13 21:17:40] 2026-01-14 02:16:54,620 | INFO     | 
[2026-01-13 21:17:40] 2026-01-14 02:16:54,620 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-13 21:17:40] 2026-01-14 02:16:54,664 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 21:17:40] 2026-01-14 02:16:54,664 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 21:17:40] 2026-01-14 02:16:54,664 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 21:17:40] 2026-01-14 02:16:54,664 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 21:17:40] 2026-01-14 02:16:54,664 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 21:17:40] 2026-01-14 02:16:54,665 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 21:17:40] 2026-01-14 02:16:54,665 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 21:17:40] 2026-01-14 02:16:54,665 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 21:17:40] 2026-01-14 02:16:54,665 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 21:17:40] 2026-01-14 02:16:54,665 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 21:17:40] 2026-01-14 02:16:54,665 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 21:17:40] 2026-01-14 02:16:54,665 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 21:17:40] 2026-01-14 02:16:54,665 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 21:17:40] 2026-01-14 02:16:54,665 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 21:17:40] 2026-01-14 02:16:54,665 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 21:17:40] 2026-01-14 02:16:54,665 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 21:17:40] 2026-01-14 02:16:54,665 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 21:17:40] 2026-01-14 02:16:54,665 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 21:17:40] 2026-01-14 02:16:54,665 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 21:17:40] 2026-01-14 02:16:54,666 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 21:17:40] 2026-01-14 02:16:54,666 | INFO     | job 6969262154 has completed (purged errors)
[2026-01-13 21:17:40] 2026-01-14 02:16:54,666 | INFO     | overall cleanup function is called
[2026-01-13 21:17:40] 2026-01-14 02:16:55,679 | INFO     | --- collectZombieJob: --- 10, [3728639]
[2026-01-13 21:17:40] 2026-01-14 02:16:55,679 | INFO     | zombie collector waiting for pid 3728639
[2026-01-13 21:17:40] 2026-01-14 02:16:55,679 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 21:17:40] 2026-01-14 02:16:55,679 | INFO     | collected zombie processes
[2026-01-13 21:17:40] 2026-01-14 02:16:55,679 | INFO     | will attempt to kill all subprocesses of pid=3728639
[2026-01-13 21:17:40] 2026-01-14 02:16:56,376 | INFO     | process IDs to be killed: [3728639] (in reverse order)
[2026-01-13 21:17:40] 2026-01-14 02:16:56,646 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 21:17:40] 2026-01-14 02:16:56,647 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 21:17:40] 2026-01-14 02:16:56,697 | INFO     | did not find any defunct processes belonging to 3728639
[2026-01-13 21:17:40] 2026-01-14 02:16:56,723 | INFO     | did not find any defunct processes belonging to 3728639
[2026-01-13 21:17:40] 2026-01-14 02:16:56,728 | INFO     | ready for new job
[2026-01-13 21:17:40] 2026-01-14 02:16:56,728 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 21:17:40] 2026-01-14 02:16:56,729 | INFO     | ***************************************
[2026-01-13 21:17:40] 2026-01-14 02:16:56,730 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 21:17:40] 2026-01-14 02:16:56,730 | INFO     | ***************************************
[2026-01-13 21:17:40] 2026-01-14 02:16:56,730 | INFO     | 
[2026-01-13 21:17:40] 2026-01-14 02:16:56,746 | INFO     | architecture information:
[2026-01-13 21:17:40] 2026-01-14 02:16:56,746 | INFO     | executing command: cat /etc/os-release
[2026-01-13 21:17:40] 2026-01-14 02:16:56,820 | INFO     | cat /etc/os-release:
[2026-01-13 21:17:40] NAME="CentOS Linux"
[2026-01-13 21:17:40] VERSION="7 (Core)"
[2026-01-13 21:17:40] ID="centos"
[2026-01-13 21:17:40] ID_LIKE="rhel fedora"
[2026-01-13 21:17:40] VERSION_ID="7"
[2026-01-13 21:17:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 21:17:40] ANSI_COLOR="0;31"
[2026-01-13 21:17:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 21:17:40] HOME_URL="https://www.centos.org/"
[2026-01-13 21:17:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 21:17:40] 
[2026-01-13 21:17:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 21:17:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 21:17:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 21:17:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 21:17:40] 
[2026-01-13 21:17:40] 2026-01-14 02:16:56,820 | INFO     | ***************************************
[2026-01-13 21:17:40] 2026-01-14 02:16:57,324 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-13 21:17:40] 2026-01-14 02:16:57,367 | INFO     | sufficient remaining disk space (120108089344 B)
[2026-01-13 21:17:40] 2026-01-14 02:16:57,367 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 21:17:40] 2026-01-14 02:16:57,368 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 21:17:40] 2026-01-14 02:16:57,368 | INFO     | update_server=False
[2026-01-13 21:17:40] 2026-01-14 02:16:57,368 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 21:17:40] 2026-01-14 02:16:57,368 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 21:17:40] 2026-01-14 02:16:57,626 | INFO     | all payload control threads have been joined
[2026-01-13 21:17:40] 2026-01-14 02:16:57,642 | INFO     | all job control threads have been joined
[2026-01-13 21:17:40] 2026-01-14 02:16:58,113 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 21:17:40] 2026-01-14 02:16:58,113 | INFO     | aborting loop
[2026-01-13 21:17:40] 2026-01-14 02:16:58,374 | INFO     | [job] retrieve thread has finished
[2026-01-13 21:17:40] 2026-01-14 02:16:58,456 | INFO     | all data control threads have been joined
[2026-01-13 21:17:40] 2026-01-14 02:16:58,566 | INFO     | [payload] validate_post thread has finished
[2026-01-13 21:17:40] 2026-01-14 02:16:58,575 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 21:17:40] 2026-01-14 02:16:58,632 | INFO     | [payload] control thread has finished
[2026-01-13 21:17:40] 2026-01-14 02:16:58,647 | INFO     | [job] control thread has finished
[2026-01-13 21:17:40] 2026-01-14 02:16:58,774 | INFO     | [data] copytool_in thread has finished
[2026-01-13 21:17:40] 2026-01-14 02:16:58,778 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 21:17:40] 2026-01-14 02:16:59,119 | INFO     | [job] job monitor thread has finished
[2026-01-13 21:17:40] 2026-01-14 02:16:59,139 | INFO     | [payload] failed_post thread has finished
[2026-01-13 21:17:40] 2026-01-14 02:16:59,320 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 21:17:40] 2026-01-14 02:16:59,375 | INFO     | [data] copytool_out thread has finished
[2026-01-13 21:17:40] 2026-01-14 02:16:59,453 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 21:17:40] 2026-01-14 02:16:59,462 | INFO     | [data] control thread has finished
[2026-01-13 21:17:40] 2026-01-14 02:16:59,491 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 21:17:40] 2026-01-14 02:16:59,633 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 21:17:40] 2026-01-14 02:16:59,822 | INFO     | [job] validate thread has finished
[2026-01-13 21:17:40] 2026-01-14 02:17:00,639 | INFO     | [job] queue monitor thread has finished
[2026-01-13 21:17:40] 2026-01-14 02:17:03,462 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 21:17:40] 2026-01-14 02:17:28,114 | INFO     | PID=3720927 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 21:17:40] 2026-01-14 02:17:28,115 | INFO     | .. there are 25 such processes running
[2026-01-13 21:17:40] 2026-01-14 02:17:28,124 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 21:17:40] 2026-01-14 02:17:28,124 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 21:17:40] 2026-01-14 02:17:28,124 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 21:17:40] 2026-01-14 02:17:31,559 | INFO     | [monitor] cgroup control has ended
[2026-01-13 21:17:40] 2026-01-14 02:17:33,645 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139873596995392)>', '<ExcThread(monitor, started 139873226831616)>']
[2026-01-13 21:17:40] 2026-01-14 02:17:34,159 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 21:17:40] 2026-01-14 02:17:34,159 | INFO     | [monitor] control thread has ended
[2026-01-13 21:17:40] 2026-01-14 02:17:38,671 | INFO     | all workflow threads have been joined
[2026-01-13 21:17:40] 2026-01-14 02:17:38,671 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 21:17:40] 2026-01-14 02:17:38,671 | INFO     | traces error code: 0
[2026-01-13 21:17:40] 2026-01-14 02:17:38,671 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 21:17:40] 2026-01-14 02:17:39,021 [wrapper] ==== pilot stdout END ====
[2026-01-13 21:17:40] 2026-01-14 02:17:39,034 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 21:17:40] 2026-01-14 02:17:39,060 [wrapper] pilotpid: 3720927
[2026-01-13 21:17:40] 2026-01-14 02:17:39,063 [wrapper] Pilot exit status: 0
[2026-01-13 21:17:40] 2026-01-14 02:17:39,136 [wrapper] pandaids: 6969262154
[2026-01-13 21:17:40] 2026-01-14 02:17:39,971 [wrapper] cleanup supervisor_pilot 4104507 3720928
[2026-01-13 21:17:40] 2026-01-14 02:17:39,983 [wrapper] Test setup, not cleaning
[2026-01-13 21:17:40] 2026-01-14 02:17:40,005 [wrapper] apfmon messages muted
[2026-01-13 21:17:40] 2026-01-14 02:17:40,035 [wrapper] ==== wrapper stdout END ====
[2026-01-13 21:17:40] 2026-01-14 02:17:40,055 [wrapper] ==== wrapper stderr END ====
[2026-01-13 21:17:40]  *** Error codes and diagnostics ***
[2026-01-13 21:17:40]     "exeErrorCode": 0,
[2026-01-13 21:17:40]     "exeErrorDiag": "",
[2026-01-13 21:17:40]     "pilotErrorCode": 0,
[2026-01-13 21:17:40]     "pilotErrorDiag": "",
[2026-01-13 21:17:40]  *** Listing of results directory ***
[2026-01-13 21:17:40] total 740732
[2026-01-13 21:17:40] -rwx------. 1 boincer umatlas     36322 Jan 13 16:58 runpilot2-wrapper.sh
[2026-01-13 21:17:40] -rw-r--r--. 1 boincer umatlas    579449 Jan 13 17:05 pilot3.tar.gz
[2026-01-13 21:17:40] -rw-r--r--. 1 boincer umatlas      5112 Jan 13 17:12 queuedata.json
[2026-01-13 21:17:40] -rw-r--r--. 1 boincer umatlas       100 Jan 13 19:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 21:17:40] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 13 19:53 run_atlas
[2026-01-13 21:17:40] -rw-r--r--. 1 boincer umatlas       105 Jan 13 19:53 job.xml
[2026-01-13 21:17:40] -rw-r--r--. 2 boincer umatlas 601775358 Jan 13 19:53 EVNT.32794306._000115.pool.root.1
[2026-01-13 21:17:40] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 19:53 start_atlas.sh
[2026-01-13 21:17:40] drwxrwx--x. 2 boincer umatlas      4096 Jan 13 19:53 shared
[2026-01-13 21:17:40] -rw-r--r--. 2 boincer umatlas    592388 Jan 13 19:53 input.tar.gz
[2026-01-13 21:17:40] -rw-r--r--. 1 boincer umatlas         0 Jan 13 19:53 boinc_lockfile
[2026-01-13 21:17:40] -rw-r--r--. 1 boincer umatlas      2505 Jan 13 19:53 pandaJob.out
[2026-01-13 21:17:40] -rw-------. 1 boincer umatlas        57 Jan 13 19:53 setup.sh.local
[2026-01-13 21:17:40] -rw-------. 1 boincer umatlas    997218 Jan 13 19:53 agis_schedconf.cvmfs.json
[2026-01-13 21:17:40] -rw-------. 1 boincer umatlas   1516246 Jan 13 19:53 agis_ddmendpoints.agis.ALL.json
[2026-01-13 21:17:40] drwx------. 5 boincer umatlas      4096 Jan 13 19:53 pilot3
[2026-01-13 21:17:40] -rw-r--r--. 1 boincer umatlas      6859 Jan 13 21:09 init_data.xml
[2026-01-13 21:17:40] -rw-------. 1 boincer umatlas 150699011 Jan 13 21:15 HITS.48215263._002872.pool.root.1
[2026-01-13 21:17:40] -rw-r--r--. 1 boincer umatlas       531 Jan 13 21:15 boinc_task_state.xml
[2026-01-13 21:17:40] -rw-------. 1 boincer umatlas      1043 Jan 13 21:16 memory_monitor_summary.json
[2026-01-13 21:17:40] -rw-------. 1 boincer umatlas    340814 Jan 13 21:16 log.48215263._002872.job.log.tgz.1
[2026-01-13 21:17:40] -rw-------. 1 boincer umatlas      7824 Jan 13 21:16 heartbeat.json
[2026-01-13 21:17:40] -rw-------. 1 boincer umatlas        95 Jan 13 21:17 pilot_heartbeat.json
[2026-01-13 21:17:40] -rw-------. 1 boincer umatlas      4825 Jan 13 21:17 pilotlog.txt
[2026-01-13 21:17:40] -rw-r--r--. 1 boincer umatlas      8192 Jan 13 21:17 boinc_mmap_file
[2026-01-13 21:17:40] -rw-r--r--. 1 boincer umatlas        27 Jan 13 21:17 wrapper_checkpoint.txt
[2026-01-13 21:17:40] -rw-------. 1 boincer umatlas    712128 Jan 13 21:17 log.48215263._002872.job.log.1
[2026-01-13 21:17:40] -rw-------. 1 boincer umatlas       357 Jan 13 21:17 output.list
[2026-01-13 21:17:40] -rw-r--r--. 1 boincer umatlas       620 Jan 13 21:17 runtime_log
[2026-01-13 21:17:40] -rw-------. 1 boincer umatlas   1075200 Jan 13 21:17 result.tar.gz
[2026-01-13 21:17:40] -rw-r--r--. 1 boincer umatlas      9352 Jan 13 21:17 runtime_log.err
[2026-01-13 21:17:40] -rw-------. 1 boincer umatlas       653 Jan 13 21:17 CqUMDmea1z8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm8qoKDmK4NtHn.diag
[2026-01-13 21:17:40] -rw-r--r--. 1 boincer umatlas     22403 Jan 13 21:17 stderr.txt
[2026-01-13 21:17:40] HITS file was successfully produced:
[2026-01-13 21:17:40] -rw-------. 1 boincer umatlas 150699011 Jan 13 21:15 shared/HITS.pool.root.1
[2026-01-13 21:17:40]  *** Contents of shared directory: ***
[2026-01-13 21:17:40] total 736496
[2026-01-13 21:17:40] -rw-r--r--. 2 boincer umatlas 601775358 Jan 13 19:53 ATLAS.root_0
[2026-01-13 21:17:40] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 19:53 start_atlas.sh
[2026-01-13 21:17:40] -rw-r--r--. 2 boincer umatlas    592388 Jan 13 19:53 input.tar.gz
[2026-01-13 21:17:40] -rw-------. 1 boincer umatlas 150699011 Jan 13 21:15 HITS.pool.root.1
[2026-01-13 21:17:40] -rw-------. 1 boincer umatlas   1075200 Jan 13 21:17 result.tar.gz
21:17:42 (3713838): run_atlas exited; CPU time 26372.337572
21:17:42 (3713838): called boinc_finish(0)

</stderr_txt>
]]>

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