Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:38:40 (670424): wrapper (7.7.26015): starting
16:38:40 (670424): wrapper: running run_atlas (--nthreads 12)
[2026-01-13 16:38:40] Arguments: --nthreads 12
[2026-01-13 16:38:40] Threads: 12
[2026-01-13 16:38:40] Checking for CVMFS
[2026-01-13 16:38:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-13 16:38:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-13 16:38:41] Running cvmfs_config stat atlas.cern.ch
[2026-01-13 16:38:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-13 16:38:41] 2.11.5.0 3295111 63057 204936 155112 1 614 37048900 45568000 16195 130560 0 481758907 99.796 283417713 19177 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-01-13 16:38:41] CVMFS is ok
[2026-01-13 16:38:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 16:38:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 16:38:41] Further information can be found at the LHC@home message board.
[2026-01-13 16:38:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 16:38:41] Checking for apptainer binary...
[2026-01-13 16:38:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-13 16:38:41] Running /usr/bin/apptainer --version
[2026-01-13 16:38:41] apptainer version 1.4.1-1.el9
[2026-01-13 16:38:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 16:38:41] wns0096.triumf.lcg
[2026-01-13 16:38:41] apptainer works
[2026-01-13 16:38:41] Set ATHENA_PROC_NUMBER=12
[2026-01-13 16:38:41] Set ATHENA_CORE_NUMBER=12
[2026-01-13 16:38:41] Starting ATLAS job with PandaID=6969262828
[2026-01-13 16:38:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 16:41:59]  *** The last 200 lines of the pilot log: ***
[2026-01-13 16:41:59] 2026-01-14 00:41:27,779 | WARNING  | found no stored workdir sizes
[2026-01-13 16:41:59] 2026-01-14 00:41:27,779 | INFO     | will not add max space = 0 B to job metrics
[2026-01-13 16:41:59] 2026-01-14 00:41:27,779 | WARNING  | wrong length of table data, x=[1768351152.0], y=[1184.0] (must be same and length>=4)
[2026-01-13 16:41:59] 2026-01-14 00:41:27,780 | INFO     | could have reported an average CPU frequency of 2746 MHz (4 samples)
[2026-01-13 16:41:59] 2026-01-14 00:41:27,780 | INFO     | ..............................
[2026-01-13 16:41:59] 2026-01-14 00:41:27,780 | INFO     | . Timing measurements:
[2026-01-13 16:41:59] 2026-01-14 00:41:27,780 | INFO     | . get job = 0 s
[2026-01-13 16:41:59] 2026-01-14 00:41:27,780 | INFO     | . initial setup = 2 s
[2026-01-13 16:41:59] 2026-01-14 00:41:27,780 | INFO     | . payload setup = 4 s
[2026-01-13 16:41:59] 2026-01-14 00:41:27,780 | INFO     | . stage-in = 0 s
[2026-01-13 16:41:59] 2026-01-14 00:41:27,780 | INFO     | . payload execution = 14 s
[2026-01-13 16:41:59] 2026-01-14 00:41:27,780 | INFO     | . stage-out = 0 s
[2026-01-13 16:41:59] 2026-01-14 00:41:27,780 | INFO     | . log creation = 0 s
[2026-01-13 16:41:59] 2026-01-14 00:41:27,780 | INFO     | ..............................
[2026-01-13 16:41:59] 2026-01-14 00:41:27,780 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-13 16:41:59] 2026-01-14 00:41:27,780 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6969262828/pilotlog.txt
[2026-01-13 16:41:59] 2026-01-14 00:41:27,790 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-13 16:41:59] - Log from pilotlog.txt -
[2026-01-13 16:41:59] 2026-01-14 00:41:27,778 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 16:41:59] 2026-01-14 00:41:27,778 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 16:41:59] 2026-01-14 00:41:27,779 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 16:41:59] 2026-01-14 00:41:27,779 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 16:41:59] 2026-01-14 00:41:27,779 | WARNING  | found no stored workdir sizes
[2026-01-13 16:41:59] 2026-01-14 00:41:27,779 | INFO     | will not add max space = 0 B to job metrics
[2026-01-13 16:41:59] 2026-01-14 00:41:27,779 | WARNING  | wrong length of table data, x=[1768351152.0], y=[1184.0] (must be same and length>=4)
[2026-01-13 16:41:59] 2026-01-14 00:41:27,780 | INFO     | could have reported an average CPU frequency of 2746 MHz (4 samples)
[2026-01-13 16:41:59] 2026-01-14 00:41:27,780 | INFO     | ..............................
[2026-01-13 16:41:59] 2026-01-14 00:41:27,780 | INFO     | . Timing measurements:
[2026-01-13 16:41:59] 2026-01-14 00:41:27,780 | INFO     | . get job = 0 s
[2026-01-13 16:41:59] 2026-01-14 00:41:27,780 | INFO     | . initial setup = 2 s
[2026-01-13 16:41:59] 2026-01-14 00:41:27,780 | INFO     | . payload setup = 4 s
[2026-01-13 16:41:59] 2026-01-14 00:41:27,780 | INFO     | . stage-in = 0 s
[2026-01-13 16:41:59] 2026-01-14 00:41:27,780 | INFO     | . payload execution = 14 s
[2026-01-13 16:41:59] 2026-01-14 00:41:27,780 | INFO     | . stage-out = 0 s
[2026-01-13 16:41:59] 2026-01-14 00:41:27,780 | INFO     | . log creation = 0 s
[2026-01-13 16:41:59] 2026-01-14 00:41:27,780 | INFO     | ..............................
[2026-01-13 16:41:59] 2026-01-14 00:41:27,780 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-13 16:41:59] 2026-01-14 00:41:27,780 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6969262828/pilotlog.txt
[2026-01-13 16:41:59] 2026-01-14 00:41:27,790 | WARNING  | 
[2026-01-13 16:41:59] [begin log extracts]
[2026-01-13 16:41:59] - Log from pilotlog.txt -
[2026-01-13 16:41:59] 2026-01-14 00:41:27,778 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 16:41:59] 2026-01-14 00:41:27,778 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 16:41:59] 2026-01-14 00:41:27,779 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 16:41:59] 2026-01-14 00:41:27,779 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 16:41:59] 2026-01-14 00:41:27,779 | WARNING  | found no stored workdir sizes
[2026-01-13 16:41:59] 2026-01-14 00:41:27,779 | INFO     | will not add max space = 0 B to job metrics
[2026-01-13 16:41:59] 2026-01-14 00:41:27,779 | WARNING  | wrong length of table data, x=[1768351152.0], y=[1184.0] (must be same and length>=4)
[2026-01-13 16:41:59] 2026-01-14 00:41:27,780 | INFO     | could have reported an average CPU frequency of 2746 MHz (4 samples)
[2026-01-13 16:41:59] 2026-01-14 00:41:27,780 | INFO     | ..............................
[2026-01-13 16:41:59] 2026-01-14 00:41:27,780 | INFO     | . Timing measurements:
[2026-01-13 16:41:59] 2026-01-14 00:41:27,780 | INFO     | . get job = 0 s
[2026-01-13 16:41:59] 2026-01-14 00:41:27,780 | INFO     | . initial setup = 2 s
[2026-01-13 16:41:59] 2026-01-14 00:41:27,780 | INFO     | . payload setup = 4 s
[2026-01-13 16:41:59] 2026-01-14 00:41:27,780 | INFO     | . stage-in = 0 s
[2026-01-13 16:41:59] 2026-01-14 00:41:27,780 | INFO     | . payload execution = 14 s
[2026-01-13 16:41:59] 2026-01-14 00:41:27,780 | INFO     | . stage-out = 0 s
[2026-01-13 16:41:59] 2026-01-14 00:41:27,780 | INFO     | . log creation = 0 s
[2026-01-13 16:41:59] 2026-01-14 00:41:27,780 | INFO     | ..............................
[2026-01-13 16:41:59] 2026-01-14 00:41:27,780 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-13 16:41:59] 2026-01-14 00:41:27,780 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6969262828/pilotlog.txt
[2026-01-13 16:41:59] [end log extracts]
[2026-01-13 16:41:59] 2026-01-14 00:41:27,791 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-01-13 16:41:59] 2026-01-14 00:41:27,791 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-13 16:41:59] 2026-01-14 00:41:27,845 | INFO     | 
[2026-01-13 16:41:59] 2026-01-14 00:41:27,845 | INFO     | job summary report
[2026-01-13 16:41:59] 2026-01-14 00:41:27,845 | INFO     | --------------------------------------------------
[2026-01-13 16:41:59] 2026-01-14 00:41:27,845 | INFO     | PanDA job id: 6969262828
[2026-01-13 16:41:59] 2026-01-14 00:41:27,845 | INFO     | task id: 48215263
[2026-01-13 16:41:59] 2026-01-14 00:41:27,845 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-13 16:39:18,713 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-13 16:41:59] 2026-01-14 00:41:27,846 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 16:41:59] 2026-01-14 00:41:27,846 | INFO     | pilot state: failed 
[2026-01-13 16:41:59] 2026-01-14 00:41:27,846 | INFO     | transexitcode: 65
[2026-01-13 16:41:59] 2026-01-14 00:41:27,846 | INFO     | exeerrorcode: 65
[2026-01-13 16:41:59] 2026-01-14 00:41:27,846 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-01-13 16:41:59] 2026-01-14 00:41:27,846 | INFO     | exitcode: 65
[2026-01-13 16:41:59] 2026-01-14 00:41:27,846 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-01-13 16:41:59] 2026-01-14 00:41:27,846 | INFO     | cpuconsumptiontime: 16 s
[2026-01-13 16:41:59] 2026-01-14 00:41:27,846 | INFO     | nevents: 0
[2026-01-13 16:41:59] 2026-01-14 00:41:27,846 | INFO     | neventsw: 0
[2026-01-13 16:41:59] 2026-01-14 00:41:27,846 | INFO     | pid: 680751
[2026-01-13 16:41:59] 2026-01-14 00:41:27,846 | INFO     | pgrp: 680751
[2026-01-13 16:41:59] 2026-01-14 00:41:27,846 | INFO     | corecount: 12
[2026-01-13 16:41:59] 2026-01-14 00:41:27,846 | INFO     | event service: False
[2026-01-13 16:41:59] 2026-01-14 00:41:27,846 | INFO     | sizes: {0: 2283942, 3: 2284204, 11: 2284232, 22: 2307419, 23: 2311711, 24: 2311739, 144: 2312033}
[2026-01-13 16:41:59] 2026-01-14 00:41:27,846 | INFO     | --------------------------------------------------
[2026-01-13 16:41:59] 2026-01-14 00:41:27,846 | INFO     | 
[2026-01-13 16:41:59] 2026-01-14 00:41:27,846 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-13 16:41:59] 2026-01-14 00:41:27,859 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 16:41:59] 2026-01-14 00:41:27,859 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 16:41:59] 2026-01-14 00:41:27,859 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 16:41:59] 2026-01-14 00:41:27,860 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 16:41:59] 2026-01-14 00:41:27,860 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 16:41:59] 2026-01-14 00:41:27,860 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 16:41:59] 2026-01-14 00:41:27,860 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 16:41:59] 2026-01-14 00:41:27,860 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 16:41:59] 2026-01-14 00:41:27,860 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 16:41:59] 2026-01-14 00:41:27,860 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 16:41:59] 2026-01-14 00:41:27,860 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 16:41:59] 2026-01-14 00:41:27,860 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 16:41:59] 2026-01-14 00:41:27,860 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 16:41:59] 2026-01-14 00:41:27,860 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 16:41:59] 2026-01-14 00:41:27,860 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 16:41:59] 2026-01-14 00:41:27,860 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 16:41:59] 2026-01-14 00:41:27,860 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 16:41:59] 2026-01-14 00:41:27,860 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 16:41:59] 2026-01-14 00:41:27,860 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 16:41:59] 2026-01-14 00:41:27,860 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 16:41:59] 2026-01-14 00:41:27,860 | INFO     | job 6969262828 has completed (purged errors)
[2026-01-13 16:41:59] 2026-01-14 00:41:27,861 | INFO     | overall cleanup function is called
[2026-01-13 16:41:59] 2026-01-14 00:41:28,866 | INFO     | --- collectZombieJob: --- 10, [680751]
[2026-01-13 16:41:59] 2026-01-14 00:41:28,866 | INFO     | zombie collector waiting for pid 680751
[2026-01-13 16:41:59] 2026-01-14 00:41:28,866 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 16:41:59] 2026-01-14 00:41:28,866 | INFO     | collected zombie processes
[2026-01-13 16:41:59] 2026-01-14 00:41:28,866 | INFO     | will attempt to kill all subprocesses of pid=680751
[2026-01-13 16:41:59] 2026-01-14 00:41:29,037 | INFO     | process IDs to be killed: [680751] (in reverse order)
[2026-01-13 16:41:59] 2026-01-14 00:41:29,099 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 16:41:59] 2026-01-14 00:41:29,100 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 16:41:59] 2026-01-14 00:41:29,107 | INFO     | did not find any defunct processes belonging to 680751
[2026-01-13 16:41:59] 2026-01-14 00:41:29,112 | INFO     | did not find any defunct processes belonging to 680751
[2026-01-13 16:41:59] 2026-01-14 00:41:29,113 | INFO     | ready for new job
[2026-01-13 16:41:59] 2026-01-14 00:41:29,113 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 16:41:59] 2026-01-14 00:41:29,114 | INFO     | ***************************************
[2026-01-13 16:41:59] 2026-01-14 00:41:29,114 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 16:41:59] 2026-01-14 00:41:29,114 | INFO     | ***************************************
[2026-01-13 16:41:59] 2026-01-14 00:41:29,114 | INFO     | 
[2026-01-13 16:41:59] 2026-01-14 00:41:29,116 | INFO     | architecture information:
[2026-01-13 16:41:59] 2026-01-14 00:41:29,116 | INFO     | executing command: cat /etc/os-release
[2026-01-13 16:41:59] 2026-01-14 00:41:29,126 | INFO     | cat /etc/os-release:
[2026-01-13 16:41:59] NAME="CentOS Linux"
[2026-01-13 16:41:59] VERSION="7 (Core)"
[2026-01-13 16:41:59] ID="centos"
[2026-01-13 16:41:59] ID_LIKE="rhel fedora"
[2026-01-13 16:41:59] VERSION_ID="7"
[2026-01-13 16:41:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 16:41:59] ANSI_COLOR="0;31"
[2026-01-13 16:41:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 16:41:59] HOME_URL="https://www.centos.org/"
[2026-01-13 16:41:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 16:41:59] 
[2026-01-13 16:41:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 16:41:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 16:41:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 16:41:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 16:41:59] 
[2026-01-13 16:41:59] 2026-01-14 00:41:29,127 | INFO     | ***************************************
[2026-01-13 16:41:59] 2026-01-14 00:41:29,629 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-13 16:41:59] 2026-01-14 00:41:29,641 | INFO     | sufficient remaining disk space (2042544259072 B)
[2026-01-13 16:41:59] 2026-01-14 00:41:29,641 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 16:41:59] 2026-01-14 00:41:29,641 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 16:41:59] 2026-01-14 00:41:29,642 | INFO     | update_server=False
[2026-01-13 16:41:59] 2026-01-14 00:41:29,642 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 16:41:59] 2026-01-14 00:41:29,642 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 16:41:59] 2026-01-14 00:41:29,739 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 16:41:59] 2026-01-14 00:41:29,739 | INFO     | aborting loop
[2026-01-13 16:41:59] 2026-01-14 00:41:29,807 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 16:41:59] 2026-01-14 00:41:30,101 | INFO     | all payload control threads have been joined
[2026-01-13 16:41:59] 2026-01-14 00:41:30,252 | INFO     | all data control threads have been joined
[2026-01-13 16:41:59] 2026-01-14 00:41:30,647 | INFO     | [job] queue monitor thread has finished
[2026-01-13 16:41:59] 2026-01-14 00:41:30,647 | INFO     | [job] retrieve thread has finished
[2026-01-13 16:41:59] 2026-01-14 00:41:30,683 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 16:41:59] 2026-01-14 00:41:30,744 | INFO     | [job] job monitor thread has finished
[2026-01-13 16:41:59] 2026-01-14 00:41:30,870 | INFO     | [payload] failed_post thread has finished
[2026-01-13 16:41:59] 2026-01-14 00:41:31,107 | INFO     | [payload] control thread has finished
[2026-01-13 16:41:59] 2026-01-14 00:41:31,149 | INFO     | all job control threads have been joined
[2026-01-13 16:41:59] 2026-01-14 00:41:31,257 | INFO     | [data] control thread has finished
[2026-01-13 16:41:59] 2026-01-14 00:41:31,474 | INFO     | [job] validate thread has finished
[2026-01-13 16:41:59] 2026-01-14 00:41:31,523 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 16:41:59] 2026-01-14 00:41:31,602 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 16:41:59] 2026-01-14 00:41:31,685 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 16:41:59] 2026-01-14 00:41:31,767 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 16:41:59] 2026-01-14 00:41:31,812 | INFO     | [data] copytool_out thread has finished
[2026-01-13 16:41:59] 2026-01-14 00:41:31,922 | INFO     | [payload] validate_post thread has finished
[2026-01-13 16:41:59] 2026-01-14 00:41:31,988 | INFO     | [data] copytool_in thread has finished
[2026-01-13 16:41:59] 2026-01-14 00:41:32,155 | INFO     | [job] control thread has finished
[2026-01-13 16:41:59] 2026-01-14 00:41:34,688 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 16:41:59] 2026-01-14 00:41:49,332 | INFO     | [monitor] cgroup control has ended
[2026-01-13 16:41:59] 2026-01-14 00:41:50,935 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140566035642176)>', '<ExcThread(monitor, started 140565203113728)>']
[2026-01-13 16:41:59] 2026-01-14 00:41:55,957 | INFO     | all workflow threads have been joined
[2026-01-13 16:41:59] 2026-01-14 00:41:55,957 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 16:41:59] 2026-01-14 00:41:55,957 | INFO     | traces error code: 0
[2026-01-13 16:41:59] 2026-01-14 00:41:55,957 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 16:41:59] 2026-01-14 00:41:59,207 | INFO     | PID=674116 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-13 16:41:59] 2026-01-14 00:41:59,208 | INFO     | .. there are 28 such processes running
[2026-01-13 16:41:59] 2026-01-14 00:41:59,208 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 16:41:59] 2026-01-14 00:41:59,208 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 16:41:59] 2026-01-14 00:41:59,208 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 16:41:59] 2026-01-14 00:41:59,208 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 16:41:59] 2026-01-14 00:41:59,209 | CRITICAL | thread 'MainThread' is not alive
[2026-01-13 16:41:59] 2026-01-14 00:41:59,209 | INFO     | [monitor] control thread has ended
[2026-01-13 16:41:59] 2026-01-14 00:41:59,331 [wrapper] ==== pilot stdout END ====
[2026-01-13 16:41:59] 2026-01-14 00:41:59,334 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 16:41:59] 2026-01-14 00:41:59,336 [wrapper] pilotpid: 674116
[2026-01-13 16:41:59] 2026-01-14 00:41:59,338 [wrapper] Pilot exit status: 0
[2026-01-13 16:41:59] 2026-01-14 00:41:59,345 [wrapper] pandaids: 6969262828
[2026-01-13 16:41:59] 2026-01-14 00:41:59,386 [wrapper] cleanup supervisor_pilot  674122 674117
[2026-01-13 16:41:59] 2026-01-14 00:41:59,388 [wrapper] Test setup, not cleaning
[2026-01-13 16:41:59] 2026-01-14 00:41:59,390 [wrapper] apfmon messages muted
[2026-01-13 16:41:59] 2026-01-14 00:41:59,392 [wrapper] ==== wrapper stdout END ====
[2026-01-13 16:41:59] 2026-01-14 00:41:59,394 [wrapper] ==== wrapper stderr END ====
[2026-01-13 16:41:59]  *** Error codes and diagnostics ***
[2026-01-13 16:41:59]     "exeErrorCode": 65,
[2026-01-13 16:41:59]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-01-13 16:41:59]     "pilotErrorCode": 1305,
[2026-01-13 16:41:59]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-01-13 16:41:59]  *** Listing of results directory ***
[2026-01-13 16:41:59] total 585672
[2026-01-13 16:41:59] -rwx------. 1 boinc boinc     36322 Jan 13 13:59 runpilot2-wrapper.sh
[2026-01-13 16:41:59] -rw-r--r--. 1 boinc boinc    579449 Jan 13 14:05 pilot3.tar.gz
[2026-01-13 16:41:59] -rw-r--r--. 1 boinc boinc      5112 Jan 13 14:12 queuedata.json
[2026-01-13 16:41:59] -rw-r--r--. 1 boinc boinc       100 Jan 13 16:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 16:41:59] -rwxr-xr-x. 1 boinc boinc      7986 Jan 13 16:38 run_atlas
[2026-01-13 16:41:59] -rw-r--r--. 1 boinc boinc       105 Jan 13 16:38 job.xml
[2026-01-13 16:41:59] -rw-r--r--. 1 boinc boinc      6595 Jan 13 16:38 init_data.xml
[2026-01-13 16:41:59] -rw-r--r--. 2 boinc boinc 595604671 Jan 13 16:38 EVNT.32794306._000137.pool.root.1
[2026-01-13 16:41:59] -rw-r--r--. 2 boinc boinc     15847 Jan 13 16:38 start_atlas.sh
[2026-01-13 16:41:59] drwxrwx--x. 2 boinc boinc      4096 Jan 13 16:38 shared
[2026-01-13 16:41:59] -rw-r--r--. 2 boinc boinc    592386 Jan 13 16:38 input.tar.gz
[2026-01-13 16:41:59] -rw-r--r--. 1 boinc boinc         0 Jan 13 16:38 boinc_lockfile
[2026-01-13 16:41:59] -rw-r--r--. 1 boinc boinc      2505 Jan 13 16:38 pandaJob.out
[2026-01-13 16:41:59] -rw-------. 1 boinc boinc    997218 Jan 13 16:38 agis_schedconf.cvmfs.json
[2026-01-13 16:41:59] -rw-------. 1 boinc boinc   1516246 Jan 13 16:38 agis_ddmendpoints.agis.ALL.json
[2026-01-13 16:41:59] drwx------. 5 boinc boinc      4096 Jan 13 16:38 pilot3
[2026-01-13 16:41:59] -rw-r--r--. 1 boinc boinc       522 Jan 13 16:39 boinc_task_state.xml
[2026-01-13 16:41:59] -rw-------. 1 boinc boinc       992 Jan 13 16:39 memory_monitor_summary.json
[2026-01-13 16:41:59] -rw-------. 1 boinc boinc     20474 Jan 13 16:39 log.48215263._003412.job.log.tgz.1
[2026-01-13 16:41:59] -rw-------. 1 boinc boinc      8425 Jan 13 16:41 heartbeat.json
[2026-01-13 16:41:59] -rw-r--r--. 1 boinc boinc      8192 Jan 13 16:41 boinc_mmap_file
[2026-01-13 16:41:59] -rw-r--r--. 1 boinc boinc        22 Jan 13 16:41 wrapper_checkpoint.txt
[2026-01-13 16:41:59] -rw-------. 1 boinc boinc        95 Jan 13 16:41 pilot_heartbeat.json
[2026-01-13 16:41:59] -rw-------. 1 boinc boinc       892 Jan 13 16:41 pilotlog.txt
[2026-01-13 16:41:59] -rw-------. 1 boinc boinc     82052 Jan 13 16:41 log.48215263._003412.job.log.1
[2026-01-13 16:41:59] -rw-------. 1 boinc boinc       188 Jan 13 16:41 output.list
[2026-01-13 16:41:59] -rw-r--r--. 1 boinc boinc       620 Jan 13 16:41 runtime_log
[2026-01-13 16:41:59] -rw-------. 1 boinc boinc    122880 Jan 13 16:41 result.tar.gz
[2026-01-13 16:41:59] -rw-r--r--. 1 boinc boinc      8636 Jan 13 16:41 runtime_log.err
[2026-01-13 16:41:59] -rw-------. 1 boinc boinc       644 Jan 13 16:41 llbKDmua1z8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm6hiKDmMLaA1n.diag
[2026-01-13 16:41:59] -rw-r--r--. 1 boinc boinc     21617 Jan 13 16:41 stderr.txt
[2026-01-13 16:41:59] No HITS result produced
[2026-01-13 16:41:59]  *** Contents of shared directory: ***
[2026-01-13 16:41:59] total 582368
[2026-01-13 16:41:59] -rw-r--r--. 2 boinc boinc 595604671 Jan 13 16:38 ATLAS.root_0
[2026-01-13 16:41:59] -rw-r--r--. 2 boinc boinc     15847 Jan 13 16:38 start_atlas.sh
[2026-01-13 16:41:59] -rw-r--r--. 2 boinc boinc    592386 Jan 13 16:38 input.tar.gz
[2026-01-13 16:41:59] -rw-------. 1 boinc boinc    122880 Jan 13 16:41 result.tar.gz
16:42:01 (670424): run_atlas exited; CPU time 19.840864
16:42:01 (670424): called boinc_finish(0)

</stderr_txt>
]]>

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