Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:40:14 (587112): wrapper (7.7.26015): starting
19:40:14 (587112): wrapper: running run_atlas (--nthreads 10)
[2026-01-13 19:40:14] Arguments: --nthreads 10
[2026-01-13 19:40:14] Threads: 10
[2026-01-13 19:40:14] Checking for CVMFS
[2026-01-13 19:40:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-13 19:40:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-13 19:40:14] Running cvmfs_config stat atlas.cern.ch
[2026-01-13 19:40:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-13 19:40:15] 2.13.3.0 12563 29402 287604 155112 0 266 32985903 40960001 20254 16776704 0 38689058 99.772 19490039 33010 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-13 19:40:15] CVMFS is ok
[2026-01-13 19:40:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 19:40:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 19:40:15] Further information can be found at the LHC@home message board.
[2026-01-13 19:40:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 19:40:15] Checking for apptainer binary...
[2026-01-13 19:40:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-13 19:40:15] Running /usr/bin/apptainer --version
[2026-01-13 19:40:15] apptainer version 1.4.5-2.el9
[2026-01-13 19:40:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 19:40:16] c-211-33-3.aglt2.org
[2026-01-13 19:40:16] apptainer works
[2026-01-13 19:40:16] Set ATHENA_PROC_NUMBER=10
[2026-01-13 19:40:16] Set ATHENA_CORE_NUMBER=10
[2026-01-13 19:40:16] Starting ATLAS job with PandaID=6969262939
[2026-01-13 19:40:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 21:00:19]  *** The last 200 lines of the pilot log: ***
[2026-01-13 21:00:19]  status_code=0
[2026-01-13 21:00:19]  storage_token=
[2026-01-13 21:00:19]  surl=/tmp/boinchome/slots/4/PanDA_Pilot-6969262939/log.48215263._003523.job.log.tgz.1
[2026-01-13 21:00:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/00/d9/log.48215263._003523.job.log.tgz.1
[2026-01-13 21:00:19]  workdir=None
[2026-01-13 21:00:19] ]
[2026-01-13 21:00:19] 2026-01-14 01:59:35,879 | INFO     | transferring file log.48215263._003523.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-6969262939/log.48215263._003523.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-13 21:00:19] 2026-01-14 01:59:35,879 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-6969262939/log.48215263._003523.job.log.tgz.1 /tmp/boinchome/slots/4/log.48215263._003523.job
[2026-01-13 21:00:19] 2026-01-14 01:59:35,897 | INFO     | adding to output.list: log.48215263._003523.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/00/d9/log.48215263._003523.job.log.tg
[2026-01-13 21:00:19] 2026-01-14 01:59:35,898 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-13 21:00:19] 2026-01-14 01:59:35,898 | INFO     | summary of transferred files:
[2026-01-13 21:00:19] 2026-01-14 01:59:35,898 | INFO     |  -- lfn=log.48215263._003523.job.log.tgz.1, status_code=0, status=transferred
[2026-01-13 21:00:19] 2026-01-14 01:59:35,898 | INFO     | stage-out finished correctly
[2026-01-13 21:00:19] 2026-01-14 01:59:36,820 | INFO     | time since job start (4715s) is within the limit (349056.0s)
[2026-01-13 21:00:19] 2026-01-14 01:59:37,420 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-13 21:00:19] 2026-01-14 01:59:37,847 | INFO     | monitor loop #329: job 0:6969262939 is in state 'finished'
[2026-01-13 21:00:19] 2026-01-14 01:59:37,848 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 21:00:19] 2026-01-14 01:59:38,502 | INFO     | PID=591652 has CPU usage=11.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 21:00:19] 2026-01-14 01:59:38,503 | INFO     | .. there are 17 such processes running
[2026-01-13 21:00:19] 2026-01-14 01:59:38,640 | INFO     | job 6969262939 has state=finished
[2026-01-13 21:00:19] 2026-01-14 01:59:38,641 | INFO     | preparing for final server update for job 6969262939 in state='finished'
[2026-01-13 21:00:19] 2026-01-14 01:59:38,641 | INFO     | this job has now completed (state=finished)
[2026-01-13 21:00:19] 2026-01-14 01:59:38,641 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-13 21:00:19] 2026-01-14 01:59:38,641 | INFO     | log transfer has been attempted: DONE
[2026-01-13 21:00:19] 2026-01-14 01:59:38,642 | INFO     | job 6969262939 has finished - writing final server update
[2026-01-13 21:00:19] 2026-01-14 01:59:38,642 | INFO     | total number of processed events: 400 (read)
[2026-01-13 21:00:19] 2026-01-14 01:59:38,643 | INFO     | executing command: lscpu
[2026-01-13 21:00:19] 2026-01-14 01:59:38,707 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-13 21:00:19] 2026-01-14 01:59:39,504 | INFO     | time since job start (4718s) is within the limit (349056.0s)
[2026-01-13 21:00:19] 2026-01-14 01:59:40,356 | INFO     | monitor loop #330: job 0:6969262939 is in state 'finished'
[2026-01-13 21:00:19] 2026-01-14 01:59:40,356 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 21:00:19] 2026-01-14 01:59:41,509 | INFO     | time since job start (4720s) is within the limit (349056.0s)
[2026-01-13 21:00:19] 2026-01-14 01:59:42,861 | INFO     | monitor loop #331: job 0:6969262939 is in state 'finished'
[2026-01-13 21:00:19] 2026-01-14 01:59:42,862 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 21:00:19] 2026-01-14 01:59:43,517 | INFO     | time since job start (4722s) is within the limit (349056.0s)
[2026-01-13 21:00:19] 2026-01-14 01:59:45,372 | INFO     | monitor loop #332: job 0:6969262939 is in state 'finished'
[2026-01-13 21:00:19] 2026-01-14 01:59:45,372 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 21:00:19] 2026-01-14 01:59:45,403 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-13 21:00:19] 2026-01-14 01:59:45,415 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2708.72684375
[2026-01-13 21:00:19] 2026-01-14 01:59:45,431 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6969262939/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 21:00:19] 2026-01-14 01:59:45,432 | INFO     | extracted standard info from prmon json
[2026-01-13 21:00:19] 2026-01-14 01:59:45,432 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 21:00:19] 2026-01-14 01:59:45,432 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 21:00:19] 2026-01-14 01:59:45,432 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 21:00:19] 2026-01-14 01:59:45,432 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 21:00:19] 2026-01-14 01:59:45,434 | INFO     | fitting pss+swap vs Time
[2026-01-13 21:00:19] 2026-01-14 01:59:45,434 | INFO     | sum of square deviations: 101864647.65217397
[2026-01-13 21:00:19] 2026-01-14 01:59:45,434 | INFO     | sum of deviations: -3857320680.434783
[2026-01-13 21:00:19] 2026-01-14 01:59:45,435 | INFO     | mean x: 1768353731.347826
[2026-01-13 21:00:19] 2026-01-14 01:59:45,435 | INFO     | mean y: 2699846.434782609
[2026-01-13 21:00:19] 2026-01-14 01:59:45,435 | INFO     | intersect: 66965160086.25489
[2026-01-13 21:00:19] 2026-01-14 01:59:45,435 | INFO     | chi2: 0.08791986002977614
[2026-01-13 21:00:19] 2026-01-14 01:59:45,435 | INFO     | current memory leak: -37.87 B/s (using 69 data points, chi2=0.09)
[2026-01-13 21:00:19] 2026-01-14 01:59:45,435 | INFO     | could have reported an average CPU frequency of 2732 MHz (6 samples)
[2026-01-13 21:00:19] 2026-01-14 01:59:45,436 | INFO     | ..............................
[2026-01-13 21:00:19] 2026-01-14 01:59:45,436 | INFO     | . Timing measurements:
[2026-01-13 21:00:19] 2026-01-14 01:59:45,436 | INFO     | . get job = 0 s
[2026-01-13 21:00:19] 2026-01-14 01:59:45,436 | INFO     | . initial setup = 4 s
[2026-01-13 21:00:19] 2026-01-14 01:59:45,436 | INFO     | . payload setup = 25 s
[2026-01-13 21:00:19] 2026-01-14 01:59:45,436 | INFO     | . stage-in = 0 s
[2026-01-13 21:00:19] 2026-01-14 01:59:45,436 | INFO     | . payload execution = 4639 s
[2026-01-13 21:00:19] 2026-01-14 01:59:45,436 | INFO     | . stage-out = 1 s
[2026-01-13 21:00:19] 2026-01-14 01:59:45,436 | INFO     | . log creation = 0 s
[2026-01-13 21:00:19] 2026-01-14 01:59:45,436 | INFO     | ..............................
[2026-01-13 21:00:19] 2026-01-14 01:59:45,550 | INFO     | time since job start (4724s) is within the limit (349056.0s)
[2026-01-13 21:00:19] 2026-01-14 01:59:45,833 | INFO     | 
[2026-01-13 21:00:19] 2026-01-14 01:59:45,834 | INFO     | job summary report
[2026-01-13 21:00:19] 2026-01-14 01:59:45,834 | INFO     | --------------------------------------------------
[2026-01-13 21:00:19] 2026-01-14 01:59:45,834 | INFO     | PanDA job id: 6969262939
[2026-01-13 21:00:19] 2026-01-14 01:59:45,834 | INFO     | task id: 48215263
[2026-01-13 21:00:19] 2026-01-14 01:59:45,834 | INFO     | errors: (none)
[2026-01-13 21:00:19] 2026-01-14 01:59:45,834 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 21:00:19] 2026-01-14 01:59:45,834 | INFO     | pilot state: finished 
[2026-01-13 21:00:19] 2026-01-14 01:59:45,834 | INFO     | transexitcode: 0
[2026-01-13 21:00:19] 2026-01-14 01:59:45,834 | INFO     | exeerrorcode: 0
[2026-01-13 21:00:19] 2026-01-14 01:59:45,834 | INFO     | exeerrordiag: 
[2026-01-13 21:00:19] 2026-01-14 01:59:45,834 | INFO     | exitcode: 0
[2026-01-13 21:00:19] 2026-01-14 01:59:45,835 | INFO     | exitmsg: OK
[2026-01-13 21:00:19] 2026-01-14 01:59:45,835 | INFO     | cpuconsumptiontime: 25409 s
[2026-01-13 21:00:19] 2026-01-14 01:59:45,835 | INFO     | nevents: 400
[2026-01-13 21:00:19] 2026-01-14 01:59:45,835 | INFO     | neventsw: 0
[2026-01-13 21:00:19] 2026-01-14 01:59:45,835 | INFO     | pid: 599191
[2026-01-13 21:00:19] 2026-01-14 01:59:45,835 | INFO     | pgrp: 599191
[2026-01-13 21:00:19] 2026-01-14 01:59:45,835 | INFO     | corecount: 10
[2026-01-13 21:00:19] 2026-01-14 01:59:45,835 | INFO     | event service: False
[2026-01-13 21:00:19] 2026-01-14 01:59:45,835 | INFO     | sizes: {0: 2283774, 1: 2283973, 12: 2283973, 21: 2284263, 23: 2284291, 4668: 2310632, 4670: 2319630, 4672: 2319686, 4680: 2319880}
[2026-01-13 21:00:19] 2026-01-14 01:59:45,835 | INFO     | --------------------------------------------------
[2026-01-13 21:00:19] 2026-01-14 01:59:45,835 | INFO     | 
[2026-01-13 21:00:19] 2026-01-14 01:59:45,835 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-13 21:00:19] 2026-01-14 01:59:45,854 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 21:00:19] 2026-01-14 01:59:45,855 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 21:00:19] 2026-01-14 01:59:45,855 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 21:00:19] 2026-01-14 01:59:45,855 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 21:00:19] 2026-01-14 01:59:45,855 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 21:00:19] 2026-01-14 01:59:45,855 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 21:00:19] 2026-01-14 01:59:45,855 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 21:00:19] 2026-01-14 01:59:45,855 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 21:00:19] 2026-01-14 01:59:45,855 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 21:00:19] 2026-01-14 01:59:45,855 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 21:00:19] 2026-01-14 01:59:45,856 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 21:00:19] 2026-01-14 01:59:45,856 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 21:00:19] 2026-01-14 01:59:45,856 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 21:00:19] 2026-01-14 01:59:45,856 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 21:00:19] 2026-01-14 01:59:45,856 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 21:00:19] 2026-01-14 01:59:45,856 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 21:00:19] 2026-01-14 01:59:45,856 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 21:00:19] 2026-01-14 01:59:45,856 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 21:00:19] 2026-01-14 01:59:45,856 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 21:00:19] 2026-01-14 01:59:45,856 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 21:00:19] 2026-01-14 01:59:45,856 | INFO     | job 6969262939 has completed (purged errors)
[2026-01-13 21:00:19] 2026-01-14 01:59:45,858 | INFO     | overall cleanup function is called
[2026-01-13 21:00:19] 2026-01-14 01:59:46,866 | INFO     | --- collectZombieJob: --- 10, [599191]
[2026-01-13 21:00:19] 2026-01-14 01:59:46,866 | INFO     | zombie collector waiting for pid 599191
[2026-01-13 21:00:19] 2026-01-14 01:59:46,866 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 21:00:19] 2026-01-14 01:59:46,866 | INFO     | collected zombie processes
[2026-01-13 21:00:19] 2026-01-14 01:59:46,866 | INFO     | will attempt to kill all subprocesses of pid=599191
[2026-01-13 21:00:19] 2026-01-14 01:59:47,234 | INFO     | process IDs to be killed: [599191] (in reverse order)
[2026-01-13 21:00:19] 2026-01-14 01:59:47,350 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 21:00:19] 2026-01-14 01:59:47,350 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 21:00:19] 2026-01-14 01:59:47,363 | INFO     | did not find any defunct processes belonging to 599191
[2026-01-13 21:00:19] 2026-01-14 01:59:47,376 | INFO     | did not find any defunct processes belonging to 599191
[2026-01-13 21:00:19] 2026-01-14 01:59:47,377 | INFO     | ready for new job
[2026-01-13 21:00:19] 2026-01-14 01:59:47,396 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 21:00:19] 2026-01-14 01:59:47,398 | INFO     | ***************************************
[2026-01-13 21:00:19] 2026-01-14 01:59:47,398 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 21:00:19] 2026-01-14 01:59:47,398 | INFO     | ***************************************
[2026-01-13 21:00:19] 2026-01-14 01:59:47,398 | INFO     | 
[2026-01-13 21:00:19] 2026-01-14 01:59:47,417 | INFO     | architecture information:
[2026-01-13 21:00:19] 2026-01-14 01:59:47,438 | INFO     | executing command: cat /etc/os-release
[2026-01-13 21:00:19] 2026-01-14 01:59:47,549 | INFO     | cat /etc/os-release:
[2026-01-13 21:00:19] NAME="CentOS Linux"
[2026-01-13 21:00:19] VERSION="7 (Core)"
[2026-01-13 21:00:19] ID="centos"
[2026-01-13 21:00:19] ID_LIKE="rhel fedora"
[2026-01-13 21:00:19] VERSION_ID="7"
[2026-01-13 21:00:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 21:00:19] ANSI_COLOR="0;31"
[2026-01-13 21:00:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 21:00:19] HOME_URL="https://www.centos.org/"
[2026-01-13 21:00:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 21:00:19] 
[2026-01-13 21:00:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 21:00:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 21:00:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 21:00:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 21:00:19] 
[2026-01-13 21:00:19] 2026-01-14 01:59:47,550 | INFO     | ***************************************
[2026-01-13 21:00:19] 2026-01-14 01:59:48,053 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-13 21:00:19] 2026-01-14 01:59:48,192 | INFO     | sufficient remaining disk space (122152812544 B)
[2026-01-13 21:00:19] 2026-01-14 01:59:48,192 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 21:00:19] 2026-01-14 01:59:48,192 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 21:00:19] 2026-01-14 01:59:48,192 | INFO     | update_server=False
[2026-01-13 21:00:19] 2026-01-14 01:59:48,192 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 21:00:19] 2026-01-14 01:59:48,193 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 21:00:19] 2026-01-14 01:59:48,884 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 21:00:19] 2026-01-14 01:59:48,885 | INFO     | aborting loop
[2026-01-13 21:00:19] 2026-01-14 01:59:48,887 | INFO     | all data control threads have been joined
[2026-01-13 21:00:19] 2026-01-14 01:59:49,041 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 21:00:19] 2026-01-14 01:59:49,089 | INFO     | all payload control threads have been joined
[2026-01-13 21:00:19] 2026-01-14 01:59:49,199 | INFO     | [job] retrieve thread has finished
[2026-01-13 21:00:19] 2026-01-14 01:59:49,355 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 21:00:19] 2026-01-14 01:59:49,386 | INFO     | [data] copytool_in thread has finished
[2026-01-13 21:00:19] 2026-01-14 01:59:49,466 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 21:00:19] 2026-01-14 01:59:49,492 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 21:00:19] 2026-01-14 01:59:49,692 | INFO     | all job control threads have been joined
[2026-01-13 21:00:19] 2026-01-14 01:59:49,891 | INFO     | [job] job monitor thread has finished
[2026-01-13 21:00:19] 2026-01-14 01:59:49,894 | INFO     | [data] control thread has finished
[2026-01-13 21:00:19] 2026-01-14 01:59:50,095 | INFO     | [payload] control thread has finished
[2026-01-13 21:00:19] 2026-01-14 01:59:50,270 | INFO     | [payload] failed_post thread has finished
[2026-01-13 21:00:19] 2026-01-14 01:59:50,341 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 21:00:19] 2026-01-14 01:59:50,460 | INFO     | [job] validate thread has finished
[2026-01-13 21:00:19] 2026-01-14 01:59:50,563 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 21:00:19] 2026-01-14 01:59:50,698 | INFO     | [job] control thread has finished
[2026-01-13 21:00:19] 2026-01-14 01:59:50,748 | INFO     | [payload] validate_post thread has finished
[2026-01-13 21:00:19] 2026-01-14 01:59:51,049 | INFO     | [data] copytool_out thread has finished
[2026-01-13 21:00:19] 2026-01-14 01:59:51,569 | INFO     | [job] queue monitor thread has finished
[2026-01-13 21:00:19] 2026-01-14 01:59:52,202 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 21:00:19] 2026-01-14 02:00:08,659 | INFO     | [monitor] cgroup control has ended
[2026-01-13 21:00:19] 2026-01-14 02:00:10,093 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140068861134656)>', '<ExcThread(monitor, started 140068337477376)>']
[2026-01-13 21:00:19] 2026-01-14 02:00:15,118 | INFO     | all workflow threads have been joined
[2026-01-13 21:00:19] 2026-01-14 02:00:15,119 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 21:00:19] 2026-01-14 02:00:15,119 | INFO     | traces error code: 0
[2026-01-13 21:00:19] 2026-01-14 02:00:15,119 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 21:00:19] 2026-01-14 02:00:19,089 | INFO     | PID=591652 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-13 21:00:19] 2026-01-14 02:00:19,090 | INFO     | .. there are 18 such processes running
[2026-01-13 21:00:19] 2026-01-14 02:00:19,091 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 21:00:19] 2026-01-14 02:00:19,091 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 21:00:19] 2026-01-14 02:00:19,091 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 21:00:19] 2026-01-14 02:00:19,091 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 21:00:19] 2026-01-14 02:00:19,091 | INFO     | [monitor] control thread has ended
[2026-01-13 21:00:19] 2026-01-14 02:00:19,229 [wrapper] ==== pilot stdout END ====
[2026-01-13 21:00:19] 2026-01-14 02:00:19,270 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 21:00:19] 2026-01-14 02:00:19,313 [wrapper] pilotpid: 591652
[2026-01-13 21:00:19] 2026-01-14 02:00:19,331 [wrapper] Pilot exit status: 0
[2026-01-13 21:00:19] 2026-01-14 02:00:19,361 [wrapper] pandaids: 6969262939
[2026-01-13 21:00:19] 2026-01-14 02:00:19,437 [wrapper] cleanup supervisor_pilot  835485 591653
[2026-01-13 21:00:19] 2026-01-14 02:00:19,441 [wrapper] Test setup, not cleaning
[2026-01-13 21:00:19] 2026-01-14 02:00:19,443 [wrapper] apfmon messages muted
[2026-01-13 21:00:19] 2026-01-14 02:00:19,446 [wrapper] ==== wrapper stdout END ====
[2026-01-13 21:00:19] 2026-01-14 02:00:19,449 [wrapper] ==== wrapper stderr END ====
[2026-01-13 21:00:19]  *** Error codes and diagnostics ***
[2026-01-13 21:00:19]     "exeErrorCode": 0,
[2026-01-13 21:00:19]     "exeErrorDiag": "",
[2026-01-13 21:00:19]     "pilotErrorCode": 0,
[2026-01-13 21:00:19]     "pilotErrorDiag": "",
[2026-01-13 21:00:19]  *** Listing of results directory ***
[2026-01-13 21:00:19] total 729096
[2026-01-13 21:00:19] -rwx------. 1 boincer umatlas     36322 Jan 13 16:59 runpilot2-wrapper.sh
[2026-01-13 21:00:19] -rw-r--r--. 1 boincer umatlas    579449 Jan 13 17:05 pilot3.tar.gz
[2026-01-13 21:00:19] -rw-r--r--. 1 boincer umatlas      5112 Jan 13 17:12 queuedata.json
[2026-01-13 21:00:19] -rw-r--r--. 1 boincer umatlas       100 Jan 13 19:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 21:00:19] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 13 19:40 run_atlas
[2026-01-13 21:00:19] -rw-r--r--. 1 boincer umatlas       105 Jan 13 19:40 job.xml
[2026-01-13 21:00:19] -rw-r--r--. 2 boincer umatlas 592471026 Jan 13 19:40 EVNT.32794306._000141.pool.root.1
[2026-01-13 21:00:19] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 19:40 start_atlas.sh
[2026-01-13 21:00:19] drwxrwx--x. 2 boincer umatlas      4096 Jan 13 19:40 shared
[2026-01-13 21:00:19] -rw-r--r--. 2 boincer umatlas    592390 Jan 13 19:40 input.tar.gz
[2026-01-13 21:00:19] -rw-r--r--. 1 boincer umatlas         0 Jan 13 19:40 boinc_lockfile
[2026-01-13 21:00:19] -rw-r--r--. 1 boincer umatlas      2505 Jan 13 19:40 pandaJob.out
[2026-01-13 21:00:19] -rw-------. 1 boincer umatlas        57 Jan 13 19:40 setup.sh.local
[2026-01-13 21:00:19] -rw-------. 1 boincer umatlas    997218 Jan 13 19:40 agis_schedconf.cvmfs.json
[2026-01-13 21:00:19] -rw-------. 1 boincer umatlas   1516246 Jan 13 19:40 agis_ddmendpoints.agis.ALL.json
[2026-01-13 21:00:19] drwx------. 5 boincer umatlas      4096 Jan 13 19:41 pilot3
[2026-01-13 21:00:19] -rw-r--r--. 1 boincer umatlas      6859 Jan 13 20:55 init_data.xml
[2026-01-13 21:00:19] -rw-r--r--. 1 boincer umatlas       531 Jan 13 20:59 boinc_task_state.xml
[2026-01-13 21:00:19] -rw-------. 1 boincer umatlas 148111892 Jan 13 20:59 HITS.48215263._003523.pool.root.1
[2026-01-13 21:00:19] -rw-------. 1 boincer umatlas        95 Jan 13 20:59 pilot_heartbeat.json
[2026-01-13 21:00:19] -rw-------. 1 boincer umatlas      1043 Jan 13 20:59 memory_monitor_summary.json
[2026-01-13 21:00:19] -rw-------. 1 boincer umatlas    370729 Jan 13 20:59 log.48215263._003523.job.log.tgz.1
[2026-01-13 21:00:19] -rw-------. 1 boincer umatlas      7830 Jan 13 20:59 heartbeat.json
[2026-01-13 21:00:19] -rw-r--r--. 1 boincer umatlas      8192 Jan 13 21:00 boinc_mmap_file
[2026-01-13 21:00:19] -rw-r--r--. 1 boincer umatlas        27 Jan 13 21:00 wrapper_checkpoint.txt
[2026-01-13 21:00:19] -rw-------. 1 boincer umatlas       822 Jan 13 21:00 pilotlog.txt
[2026-01-13 21:00:19] -rw-------. 1 boincer umatlas    669809 Jan 13 21:00 log.48215263._003523.job.log.1
[2026-01-13 21:00:19] -rw-------. 1 boincer umatlas       357 Jan 13 21:00 output.list
[2026-01-13 21:00:19] -rw-r--r--. 1 boincer umatlas       620 Jan 13 21:00 runtime_log
[2026-01-13 21:00:19] -rw-------. 1 boincer umatlas   1064960 Jan 13 21:00 result.tar.gz
[2026-01-13 21:00:19] -rw-r--r--. 1 boincer umatlas      9354 Jan 13 21:00 runtime_log.err
[2026-01-13 21:00:19] -rw-------. 1 boincer umatlas       654 Jan 13 21:00 iBmMDmva1z8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmRjiKDmI4w53m.diag
[2026-01-13 21:00:19] -rw-r--r--. 1 boincer umatlas     22286 Jan 13 21:00 stderr.txt
[2026-01-13 21:00:19] HITS file was successfully produced:
[2026-01-13 21:00:19] -rw-------. 1 boincer umatlas 148111892 Jan 13 20:59 shared/HITS.pool.root.1
[2026-01-13 21:00:19]  *** Contents of shared directory: ***
[2026-01-13 21:00:19] total 724876
[2026-01-13 21:00:19] -rw-r--r--. 2 boincer umatlas 592471026 Jan 13 19:40 ATLAS.root_0
[2026-01-13 21:00:19] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 19:40 start_atlas.sh
[2026-01-13 21:00:19] -rw-r--r--. 2 boincer umatlas    592390 Jan 13 19:40 input.tar.gz
[2026-01-13 21:00:19] -rw-------. 1 boincer umatlas 148111892 Jan 13 20:59 HITS.pool.root.1
[2026-01-13 21:00:19] -rw-------. 1 boincer umatlas   1064960 Jan 13 21:00 result.tar.gz
21:00:21 (587112): run_atlas exited; CPU time 25522.582630
21:00:21 (587112): called boinc_finish(0)

</stderr_txt>
]]>

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