Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:05:50 (236654): wrapper (7.7.26015): starting
04:05:50 (236654): wrapper: running run_atlas (--nthreads 4)
[2026-01-14 04:05:50] Arguments: --nthreads 4
[2026-01-14 04:05:50] Threads: 4
[2026-01-14 04:05:50] Checking for CVMFS
[2026-01-14 04:05:50] No cvmfs_config command found, will try listing directly
[2026-01-14 04:05:50] CVMFS is ok
[2026-01-14 04:05:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 04:05:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 04:05:50] Further information can be found at the LHC@home message board.
[2026-01-14 04:05:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 04:05:50] Checking for apptainer binary...
[2026-01-14 04:05:50] which: no apptainer in ((null))
[2026-01-14 04:05:50] apptainer is not installed, using version from CVMFS
[2026-01-14 04:05:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 04:05:50] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot128/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-01-14 04:05:50] apptainer works
[2026-01-14 04:05:50] Set ATHENA_PROC_NUMBER=4
[2026-01-14 04:05:50] Set ATHENA_CORE_NUMBER=4
[2026-01-14 04:05:50] Starting ATLAS job with PandaID=6969257383
[2026-01-14 04:05:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot128/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 05:34:05]  *** The last 200 lines of the pilot log: ***
[2026-01-14 05:34:05]  protocol_id=None
[2026-01-14 05:34:05]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-14 05:34:05]  replicas=None
[2026-01-14 05:34:05]  scope=mc23_13p6TeV
[2026-01-14 05:34:05]  status=None
[2026-01-14 05:34:05]  status_code=0
[2026-01-14 05:34:05]  storage_token=
[2026-01-14 05:34:05]  surl=/scratch/boinc/var/slot128/slots/0/PanDA_Pilot-6969257383/log.48215263._001244.job.log.tgz.1
[2026-01-14 05:34:05]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fb/0f/log.48215263._001244.job.log.tgz.1
[2026-01-14 05:34:05]  workdir=None
[2026-01-14 05:34:05] ]
[2026-01-14 05:34:05] 2026-01-14 04:32:54,346 | INFO     | transferring file log.48215263._001244.job.log.tgz.1 from /scratch/boinc/var/slot128/slots/0/PanDA_Pilot-6969257383/log.48215263._001244.job.log.tgz.1 to /scratch/
[2026-01-14 05:34:05] 2026-01-14 04:32:54,346 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot128/slots/0/PanDA_Pilot-6969257383/log.48215263._001244.job.log.tgz.1 /scratch/boinc/var/slot128/slots/0/
[2026-01-14 05:34:05] 2026-01-14 04:32:54,373 | INFO     | adding to output.list: log.48215263._001244.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fb/0f/log.48215263._001244.job.log.tg
[2026-01-14 05:34:05] 2026-01-14 04:32:54,374 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-14 05:34:05] 2026-01-14 04:32:54,374 | INFO     | summary of transferred files:
[2026-01-14 05:34:05] 2026-01-14 04:32:54,374 | INFO     |  -- lfn=log.48215263._001244.job.log.tgz.1, status_code=0, status=transferred
[2026-01-14 05:34:05] 2026-01-14 04:32:54,375 | INFO     | stage-out finished correctly
[2026-01-14 05:34:05] 2026-01-14 04:32:54,466 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-14 05:34:05] 2026-01-14 04:32:55,413 | INFO     | job 6969257383 has state=finished
[2026-01-14 05:34:05] 2026-01-14 04:32:55,414 | INFO     | preparing for final server update for job 6969257383 in state='finished'
[2026-01-14 05:34:05] 2026-01-14 04:32:55,414 | INFO     | this job has now completed (state=finished)
[2026-01-14 05:34:05] 2026-01-14 04:32:55,414 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-14 05:34:05] 2026-01-14 04:32:55,414 | INFO     | log transfer has been attempted: DONE
[2026-01-14 05:34:05] 2026-01-14 04:32:55,414 | INFO     | job 6969257383 has finished - writing final server update
[2026-01-14 05:34:05] 2026-01-14 04:32:55,415 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_247154/.job.ad'
[2026-01-14 05:34:05] 2026-01-14 04:32:55,415 | INFO     | total number of processed events: 400 (read)
[2026-01-14 05:34:05] 2026-01-14 04:32:55,416 | INFO     | executing command: lscpu
[2026-01-14 05:34:05] 2026-01-14 04:32:55,518 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-14 05:34:05] 2026-01-14 04:32:55,647 | INFO     | monitor loop #365: job 0:6969257383 is in state 'finished'
[2026-01-14 05:34:05] 2026-01-14 04:32:55,647 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 05:34:05] 2026-01-14 04:32:55,999 | INFO     | time since job start (5210s) is within the limit (349056.0s)
[2026-01-14 05:34:05] 2026-01-14 04:32:58,001 | INFO     | time since job start (5213s) is within the limit (349056.0s)
[2026-01-14 05:34:05] 2026-01-14 04:32:58,150 | INFO     | monitor loop #366: job 0:6969257383 is in state 'finished'
[2026-01-14 05:34:05] 2026-01-14 04:32:58,150 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 05:34:05] 2026-01-14 04:33:00,007 | INFO     | time since job start (5215s) is within the limit (349056.0s)
[2026-01-14 05:34:05] 2026-01-14 04:33:00,654 | INFO     | monitor loop #367: job 0:6969257383 is in state 'finished'
[2026-01-14 05:34:05] 2026-01-14 04:33:00,654 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 05:34:05] 2026-01-14 04:33:01,512 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-14 05:34:05] 2026-01-14 04:33:01,533 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2742.6499140625006
[2026-01-14 05:34:05] 2026-01-14 04:33:01,558 | INFO     | using path: /scratch/boinc/var/slot128/slots/0/PanDA_Pilot-6969257383/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 05:34:05] 2026-01-14 04:33:01,559 | INFO     | extracted standard info from prmon json
[2026-01-14 05:34:05] 2026-01-14 04:33:01,559 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 05:34:05] 2026-01-14 04:33:01,559 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 05:34:05] 2026-01-14 04:33:01,559 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 05:34:05] 2026-01-14 04:33:01,559 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 05:34:05] 2026-01-14 04:33:01,561 | INFO     | fitting pss+swap vs Time
[2026-01-14 05:34:05] 2026-01-14 04:33:01,562 | INFO     | sum of square deviations: 147126479.5
[2026-01-14 05:34:05] 2026-01-14 04:33:01,562 | INFO     | sum of deviations: -939850119.0000001
[2026-01-14 05:34:05] 2026-01-14 04:33:01,562 | INFO     | mean x: 1768362651.5
[2026-01-14 05:34:05] 2026-01-14 04:33:01,562 | INFO     | mean y: 2359672.205128205
[2026-01-14 05:34:05] 2026-01-14 04:33:01,562 | INFO     | intersect: 11298734424.701199
[2026-01-14 05:34:05] 2026-01-14 04:33:01,563 | INFO     | chi2: 0.009644258486884057
[2026-01-14 05:34:05] 2026-01-14 04:33:01,563 | INFO     | current memory leak: -6.39 B/s (using 78 data points, chi2=0.01)
[2026-01-14 05:34:05] 2026-01-14 04:33:01,563 | INFO     | could have reported an average CPU frequency of 2730 MHz (6 samples)
[2026-01-14 05:34:05] 2026-01-14 04:33:01,563 | INFO     | ..............................
[2026-01-14 05:34:05] 2026-01-14 04:33:01,563 | INFO     | . Timing measurements:
[2026-01-14 05:34:05] 2026-01-14 04:33:01,564 | INFO     | . get job = 0 s
[2026-01-14 05:34:05] 2026-01-14 04:33:01,564 | INFO     | . initial setup = 1 s
[2026-01-14 05:34:05] 2026-01-14 04:33:01,564 | INFO     | . payload setup = 8 s
[2026-01-14 05:34:05] 2026-01-14 04:33:01,564 | INFO     | . stage-in = 0 s
[2026-01-14 05:34:05] 2026-01-14 04:33:01,564 | INFO     | . payload execution = 5179 s
[2026-01-14 05:34:05] 2026-01-14 04:33:01,564 | INFO     | . stage-out = 0 s
[2026-01-14 05:34:05] 2026-01-14 04:33:01,564 | INFO     | . log creation = 0 s
[2026-01-14 05:34:05] 2026-01-14 04:33:01,564 | INFO     | ..............................
[2026-01-14 05:34:05] 2026-01-14 04:33:01,684 | INFO     | 
[2026-01-14 05:34:05] 2026-01-14 04:33:01,685 | INFO     | job summary report
[2026-01-14 05:34:05] 2026-01-14 04:33:01,685 | INFO     | --------------------------------------------------
[2026-01-14 05:34:05] 2026-01-14 04:33:01,685 | INFO     | PanDA job id: 6969257383
[2026-01-14 05:34:05] 2026-01-14 04:33:01,685 | INFO     | task id: 48215263
[2026-01-14 05:34:05] 2026-01-14 04:33:01,685 | INFO     | errors: (none)
[2026-01-14 05:34:05] 2026-01-14 04:33:01,685 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 05:34:05] 2026-01-14 04:33:01,685 | INFO     | pilot state: finished 
[2026-01-14 05:34:05] 2026-01-14 04:33:01,686 | INFO     | transexitcode: 0
[2026-01-14 05:34:05] 2026-01-14 04:33:01,686 | INFO     | exeerrorcode: 0
[2026-01-14 05:34:05] 2026-01-14 04:33:01,686 | INFO     | exeerrordiag: 
[2026-01-14 05:34:05] 2026-01-14 04:33:01,686 | INFO     | exitcode: 0
[2026-01-14 05:34:05] 2026-01-14 04:33:01,686 | INFO     | exitmsg: OK
[2026-01-14 05:34:05] 2026-01-14 04:33:01,686 | INFO     | cpuconsumptiontime: 19718 s
[2026-01-14 05:34:05] 2026-01-14 04:33:01,686 | INFO     | nevents: 400
[2026-01-14 05:34:05] 2026-01-14 04:33:01,686 | INFO     | neventsw: 0
[2026-01-14 05:34:05] 2026-01-14 04:33:01,686 | INFO     | pid: 248301
[2026-01-14 05:34:05] 2026-01-14 04:33:01,686 | INFO     | pgrp: 248301
[2026-01-14 05:34:05] 2026-01-14 04:33:01,686 | INFO     | corecount: 4
[2026-01-14 05:34:05] 2026-01-14 04:33:01,686 | INFO     | event service: False
[2026-01-14 05:34:05] 2026-01-14 04:33:01,687 | INFO     | sizes: {0: 2283954, 6: 2284216, 11: 2284244, 5191: 2310876, 5192: 2319954, 5199: 2320092}
[2026-01-14 05:34:05] 2026-01-14 04:33:01,687 | INFO     | --------------------------------------------------
[2026-01-14 05:34:05] 2026-01-14 04:33:01,687 | INFO     | 
[2026-01-14 05:34:05] 2026-01-14 04:33:01,687 | INFO     | executing command: ls -lF /scratch/boinc/var/slot128/slots/0
[2026-01-14 05:34:05] 2026-01-14 04:33:01,717 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 05:34:05] 2026-01-14 04:33:01,717 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 05:34:05] 2026-01-14 04:33:01,717 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 05:34:05] 2026-01-14 04:33:01,717 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 05:34:05] 2026-01-14 04:33:01,717 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 05:34:05] 2026-01-14 04:33:01,717 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 05:34:05] 2026-01-14 04:33:01,717 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 05:34:05] 2026-01-14 04:33:01,718 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 05:34:05] 2026-01-14 04:33:01,718 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 05:34:05] 2026-01-14 04:33:01,718 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 05:34:05] 2026-01-14 04:33:01,718 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 05:34:05] 2026-01-14 04:33:01,718 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 05:34:05] 2026-01-14 04:33:01,718 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 05:34:05] 2026-01-14 04:33:01,718 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 05:34:05] 2026-01-14 04:33:01,718 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 05:34:05] 2026-01-14 04:33:01,718 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 05:34:05] 2026-01-14 04:33:01,718 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 05:34:05] 2026-01-14 04:33:01,718 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 05:34:05] 2026-01-14 04:33:01,719 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 05:34:05] 2026-01-14 04:33:01,719 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 05:34:05] 2026-01-14 04:33:01,719 | INFO     | job 6969257383 has completed (purged errors)
[2026-01-14 05:34:05] 2026-01-14 04:33:01,719 | INFO     | overall cleanup function is called
[2026-01-14 05:34:05] 2026-01-14 04:33:02,728 | INFO     | --- collectZombieJob: --- 10, [248301]
[2026-01-14 05:34:05] 2026-01-14 04:33:02,728 | INFO     | zombie collector waiting for pid 248301
[2026-01-14 05:34:05] 2026-01-14 04:33:02,728 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 05:34:05] 2026-01-14 04:33:02,728 | INFO     | collected zombie processes
[2026-01-14 05:34:05] 2026-01-14 04:33:02,728 | INFO     | will attempt to kill all subprocesses of pid=248301
[2026-01-14 05:34:05] 2026-01-14 04:33:03,370 | INFO     | process IDs to be killed: [248301] (in reverse order)
[2026-01-14 05:34:05] 2026-01-14 04:33:03,597 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 05:34:05] 2026-01-14 04:33:03,598 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 05:34:05] 2026-01-14 04:33:03,627 | INFO     | did not find any defunct processes belonging to 248301
[2026-01-14 05:34:05] 2026-01-14 04:33:03,653 | INFO     | did not find any defunct processes belonging to 248301
[2026-01-14 05:34:05] 2026-01-14 04:33:03,653 | INFO     | ready for new job
[2026-01-14 05:34:05] 2026-01-14 04:33:03,653 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 05:34:05] 2026-01-14 04:33:03,655 | INFO     | ***************************************
[2026-01-14 05:34:05] 2026-01-14 04:33:03,655 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 05:34:05] 2026-01-14 04:33:03,655 | INFO     | ***************************************
[2026-01-14 05:34:05] 2026-01-14 04:33:03,655 | INFO     | 
[2026-01-14 05:34:05] 2026-01-14 04:33:03,663 | INFO     | architecture information:
[2026-01-14 05:34:05] 2026-01-14 04:33:03,663 | INFO     | executing command: cat /etc/os-release
[2026-01-14 05:34:05] 2026-01-14 04:33:03,684 | INFO     | cat /etc/os-release:
[2026-01-14 05:34:05] NAME="CentOS Linux"
[2026-01-14 05:34:05] VERSION="7 (Core)"
[2026-01-14 05:34:05] ID="centos"
[2026-01-14 05:34:05] ID_LIKE="rhel fedora"
[2026-01-14 05:34:05] VERSION_ID="7"
[2026-01-14 05:34:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 05:34:05] ANSI_COLOR="0;31"
[2026-01-14 05:34:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 05:34:05] HOME_URL="https://www.centos.org/"
[2026-01-14 05:34:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 05:34:05] 
[2026-01-14 05:34:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 05:34:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 05:34:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 05:34:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 05:34:05] 
[2026-01-14 05:34:05] 2026-01-14 04:33:03,684 | INFO     | ***************************************
[2026-01-14 05:34:05] 2026-01-14 04:33:04,187 | INFO     | executing command: df -mP /scratch/boinc/var/slot128/slots/0
[2026-01-14 05:34:05] 2026-01-14 04:33:04,213 | INFO     | sufficient remaining disk space (3321141133312 B)
[2026-01-14 05:34:05] 2026-01-14 04:33:04,214 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 05:34:05] 2026-01-14 04:33:04,214 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 05:34:05] 2026-01-14 04:33:04,214 | INFO     | update_server=False
[2026-01-14 05:34:05] 2026-01-14 04:33:04,214 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 05:34:05] 2026-01-14 04:33:04,214 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 05:34:05] 2026-01-14 04:33:04,215 | INFO     | aborting loop
[2026-01-14 05:34:05] 2026-01-14 04:33:04,273 | INFO     | all payload control threads have been joined
[2026-01-14 05:34:05] 2026-01-14 04:33:04,863 | INFO     | all job control threads have been joined
[2026-01-14 05:34:05] 2026-01-14 04:33:04,981 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 05:34:05] 2026-01-14 04:33:05,061 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 05:34:05] 2026-01-14 04:33:05,187 | INFO     | all data control threads have been joined
[2026-01-14 05:34:05] 2026-01-14 04:33:05,220 | INFO     | [job] retrieve thread has finished
[2026-01-14 05:34:05] 2026-01-14 04:33:05,220 | INFO     | [job] job monitor thread has finished
[2026-01-14 05:34:05] 2026-01-14 04:33:05,278 | INFO     | [payload] control thread has finished
[2026-01-14 05:34:05] 2026-01-14 04:33:05,618 | INFO     | [job] validate thread has finished
[2026-01-14 05:34:05] 2026-01-14 04:33:05,830 | INFO     | [payload] validate_post thread has finished
[2026-01-14 05:34:05] 2026-01-14 04:33:05,869 | INFO     | [job] control thread has finished
[2026-01-14 05:34:05] 2026-01-14 04:33:05,973 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 05:34:05] 2026-01-14 04:33:06,190 | INFO     | [data] control thread has finished
[2026-01-14 05:34:05] 2026-01-14 04:33:06,201 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 05:34:05] 2026-01-14 04:33:06,270 | INFO     | [data] copytool_in thread has finished
[2026-01-14 05:34:05] 2026-01-14 04:33:06,425 | INFO     | [payload] failed_post thread has finished
[2026-01-14 05:34:05] 2026-01-14 04:33:06,535 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 05:34:05] 2026-01-14 04:33:06,583 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 05:34:05] 2026-01-14 04:33:06,677 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 05:34:05] 2026-01-14 04:33:06,986 | INFO     | [data] copytool_out thread has finished
[2026-01-14 05:34:05] 2026-01-14 04:33:07,683 | INFO     | [job] queue monitor thread has finished
[2026-01-14 05:34:05] 2026-01-14 04:33:09,063 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 05:34:05] 2026-01-14 04:33:12,843 | INFO     | [monitor] cgroup control has ended
[2026-01-14 05:34:05] 2026-01-14 04:33:14,711 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22440517953344)>', '<ExcThread(monitor, started 22440279242496)>']
[2026-01-14 05:34:05] 2026-01-14 04:33:19,719 | INFO     | all workflow threads have been joined
[2026-01-14 05:34:05] 2026-01-14 04:33:19,722 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 05:34:05] 2026-01-14 04:33:19,722 | INFO     | traces error code: 0
[2026-01-14 05:34:05] 2026-01-14 04:33:19,723 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 05:34:05] 2026-01-14 04:33:33,920 | INFO     | PID=241008 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-14 05:34:05] 2026-01-14 04:33:33,920 | INFO     | .. there are 6 such processes running
[2026-01-14 05:34:05] 2026-01-14 04:33:33,921 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 05:34:05] 2026-01-14 04:33:33,921 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 05:34:05] 2026-01-14 04:33:33,921 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 05:34:05] 2026-01-14 04:33:33,921 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 05:34:05] 2026-01-14 04:33:33,921 | INFO     | [monitor] control thread has ended
[2026-01-14 05:34:05] 2026-01-14 04:33:34,137 [wrapper] ==== pilot stdout END ====
[2026-01-14 05:34:05] 2026-01-14 04:33:34,143 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 05:34:05] 2026-01-14 04:33:34,147 [wrapper] pilotpid: 241008
[2026-01-14 05:34:05] 2026-01-14 04:33:34,151 [wrapper] Pilot exit status: 0
[2026-01-14 05:34:05] 2026-01-14 04:33:34,165 [wrapper] pandaids: 6969257383
[2026-01-14 05:34:05] 2026-01-14 04:33:34,323 [wrapper] cleanup supervisor_pilot  393052 241009
[2026-01-14 05:34:05] 2026-01-14 04:33:34,327 [wrapper] Test setup, not cleaning
[2026-01-14 05:34:05] 2026-01-14 04:33:34,331 [wrapper] apfmon messages muted
[2026-01-14 05:34:05] 2026-01-14 04:33:34,335 [wrapper] ==== wrapper stdout END ====
[2026-01-14 05:34:05] 2026-01-14 04:33:34,339 [wrapper] ==== wrapper stderr END ====
[2026-01-14 05:34:05]  *** Error codes and diagnostics ***
[2026-01-14 05:34:05]     "exeErrorCode": 0,
[2026-01-14 05:34:05]     "exeErrorDiag": "",
[2026-01-14 05:34:05]     "pilotErrorCode": 0,
[2026-01-14 05:34:05]     "pilotErrorDiag": "",
[2026-01-14 05:34:05]  *** Listing of results directory ***
[2026-01-14 05:34:05] total 732516
[2026-01-14 05:34:05] -rw-r--r-- 1 boinc boinc    579449 Jan 13 22:10 pilot3.tar.gz
[2026-01-14 05:34:05] -rw-r--r-- 1 boinc boinc      5112 Jan 13 22:42 queuedata.json
[2026-01-14 05:34:05] -rwx------ 1 boinc boinc     36322 Jan 13 22:43 runpilot2-wrapper.sh
[2026-01-14 05:34:05] -rw-r--r-- 1 boinc boinc       100 Jan 14 01:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 05:34:05] -rwxr-xr-x 1 boinc boinc      7986 Jan 14 01:33 run_atlas
[2026-01-14 05:34:05] -rw-r--r-- 1 boinc boinc       105 Jan 14 01:33 job.xml
[2026-01-14 05:34:05] -rw-r--r-- 2 boinc boinc 594451655 Jan 14 04:05 EVNT.32794306._000050.pool.root.1
[2026-01-14 05:34:05] -rw-r--r-- 1 boinc boinc      6691 Jan 14 04:05 init_data.xml
[2026-01-14 05:34:05] -rw-r--r-- 2 boinc boinc     15847 Jan 14 04:05 start_atlas.sh
[2026-01-14 05:34:05] drwxrwx--x 2 boinc boinc      4096 Jan 14 04:05 shared
[2026-01-14 05:34:05] -rw-r--r-- 2 boinc boinc    592395 Jan 14 04:05 input.tar.gz
[2026-01-14 05:34:05] -rw-r--r-- 1 boinc boinc         0 Jan 14 04:05 boinc_lockfile
[2026-01-14 05:34:05] -rw-r--r-- 1 boinc boinc      2503 Jan 14 04:05 pandaJob.out
[2026-01-14 05:34:05] -rw------- 1 boinc boinc    997226 Jan 14 04:06 agis_schedconf.cvmfs.json
[2026-01-14 05:34:05] -rw------- 1 boinc boinc   1516246 Jan 14 04:06 agis_ddmendpoints.agis.ALL.json
[2026-01-14 05:34:05] drwx------ 5 boinc boinc      4096 Jan 14 04:06 pilot3
[2026-01-14 05:34:05] -rw------- 1 boinc boinc 149653654 Jan 14 05:32 HITS.48215263._001244.pool.root.1
[2026-01-14 05:34:05] -rw------- 1 boinc boinc        95 Jan 14 05:32 pilot_heartbeat.json
[2026-01-14 05:34:05] -rw-r--r-- 1 boinc boinc       529 Jan 14 05:32 boinc_task_state.xml
[2026-01-14 05:34:05] -rw------- 1 boinc boinc      1027 Jan 14 05:32 memory_monitor_summary.json
[2026-01-14 05:34:05] -rw------- 1 boinc boinc    280221 Jan 14 05:32 log.48215263._001244.job.log.tgz.1
[2026-01-14 05:34:05] -rw------- 1 boinc boinc      7777 Jan 14 05:33 heartbeat.json
[2026-01-14 05:34:05] -rw------- 1 boinc boinc       821 Jan 14 05:33 pilotlog.txt
[2026-01-14 05:34:05] -rw------- 1 boinc boinc    754864 Jan 14 05:33 log.48215263._001244.job.log.1
[2026-01-14 05:34:05] -rw------- 1 boinc boinc       357 Jan 14 05:33 output.list
[2026-01-14 05:34:05] -rw-r--r-- 1 boinc boinc       620 Jan 14 05:33 runtime_log
[2026-01-14 05:34:05] -rw------- 1 boinc boinc   1054720 Jan 14 05:33 result.tar.gz
[2026-01-14 05:34:05] -rw-r--r-- 1 boinc boinc      9222 Jan 14 05:33 runtime_log.err
[2026-01-14 05:34:05] -rw------- 1 boinc boinc       663 Jan 14 05:33 EvBNDmuL1z8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjIoKDmD5KXIo.diag
[2026-01-14 05:34:05] -rw-r--r-- 1 boinc boinc        26 Jan 14 05:33 wrapper_checkpoint.txt
[2026-01-14 05:34:05] -rw-r--r-- 1 boinc boinc      8192 Jan 14 05:34 boinc_mmap_file
[2026-01-14 05:34:05] -rw-r--r-- 1 boinc boinc     21694 Jan 14 05:34 stderr.txt
[2026-01-14 05:34:05] HITS file was successfully produced:
[2026-01-14 05:34:05] -rw------- 1 boinc boinc 149653654 Jan 14 05:32 shared/HITS.pool.root.1
[2026-01-14 05:34:05]  *** Contents of shared directory: ***
[2026-01-14 05:34:05] total 728304
[2026-01-14 05:34:05] -rw-r--r-- 2 boinc boinc 594451655 Jan 14 04:05 ATLAS.root_0
[2026-01-14 05:34:05] -rw-r--r-- 2 boinc boinc     15847 Jan 14 04:05 start_atlas.sh
[2026-01-14 05:34:05] -rw-r--r-- 2 boinc boinc    592395 Jan 14 04:05 input.tar.gz
[2026-01-14 05:34:05] -rw------- 1 boinc boinc 149653654 Jan 14 05:32 HITS.pool.root.1
[2026-01-14 05:34:05] -rw------- 1 boinc boinc   1054720 Jan 14 05:33 result.tar.gz
05:34:06 (236654): run_atlas exited; CPU time 20042.255068
05:34:06 (236654): called boinc_finish(0)

</stderr_txt>
]]>

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