Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-14 02:31:30 (17004): vboxwrapper version 26210
2026-01-14 02:31:30 (17004): BOINC client version: 8.2.8
2026-01-14 02:31:31 (17004): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2026-01-14 02:31:31 (17004): Successfully copied 'init_data.xml' to the shared directory.
2026-01-14 02:31:31 (17004): Create VM. (boinc_5ac82dba5f1d1432, slot#1)
2026-01-14 02:31:32 (17004): Setting Memory Size for VM. (4800MB)
2026-01-14 02:31:32 (17004): Setting CPU Count for VM. (8)
2026-01-14 02:31:32 (17004): Setting Chipset Options for VM.
2026-01-14 02:31:32 (17004): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-14 02:31:33 (17004): Setting Boot Options for VM.
2026-01-14 02:31:33 (17004): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-14 02:31:33 (17004): Enabling VM Network Access.
2026-01-14 02:31:34 (17004): Disabling USB Support for VM.
2026-01-14 02:31:34 (17004): Disabling COM Port Support for VM.
2026-01-14 02:31:34 (17004): Disabling LPT Port Support for VM.
2026-01-14 02:31:34 (17004): Disabling Audio Support for VM.
2026-01-14 02:31:35 (17004): Disabling Clipboard Support for VM.
2026-01-14 02:31:35 (17004): Disabling Drag and Drop Support for VM.
2026-01-14 02:31:35 (17004): Adding storage controller(s) to VM.
2026-01-14 02:31:35 (17004): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-14 02:31:38 (17004): Adding VirtualBox Guest Additions to VM.
2026-01-14 02:31:38 (17004): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-14 02:31:38 (17004): forwarding host port 62617 to guest port 80
2026-01-14 02:31:38 (17004): Enabling remote desktop for VM.
2026-01-14 02:31:39 (17004): Required extension pack not installed, remote desktop not enabled.
2026-01-14 02:31:39 (17004): Enabling shared directory for VM.
2026-01-14 02:31:39 (17004): Starting VM using VBoxManage interface. (boinc_5ac82dba5f1d1432, slot#1)
2026-01-14 02:31:44 (17004): Successfully started VM. (PID = '2312')
2026-01-14 02:31:44 (17004): Reporting VM Process ID to BOINC.
2026-01-14 02:31:44 (17004): Guest Log: BIOS: VirtualBox 7.2.2
2026-01-14 02:31:44 (17004): Guest Log: CPUID EDX: 0x178bfbff
2026-01-14 02:31:44 (17004): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-14 02:31:44 (17004): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-14 02:31:44 (17004): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-14 02:31:44 (17004): Detected: Web Application Enabled (http://localhost:62617)
2026-01-14 02:31:44 (17004): Preference change detected
2026-01-14 02:31:44 (17004): Setting CPU throttle for VM. (100%)
2026-01-14 02:31:44 (17004): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 23 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-14 02:31:46 (17004): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-14 02:31:46 (17004): Guest Log: BIOS: Booting from Hard Disk...
2026-01-14 02:31:48 (17004): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-14 02:31:48 (17004): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-14 02:31:48 (17004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-14 02:31:48 (17004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-14 02:31:48 (17004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-14 02:31:48 (17004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-14 02:31:48 (17004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-14 02:31:48 (17004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-14 02:31:48 (17004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-14 02:31:48 (17004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-14 02:31:48 (17004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-14 02:31:48 (17004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-14 02:31:48 (17004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-14 02:31:48 (17004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-14 02:31:48 (17004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-14 02:31:48 (17004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-14 02:31:48 (17004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-14 02:31:48 (17004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-14 02:31:48 (17004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-14 02:31:48 (17004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-14 02:31:48 (17004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-14 02:31:48 (17004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-14 02:31:48 (17004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-14 02:31:48 (17004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-14 02:31:48 (17004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-14 02:31:48 (17004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-14 02:31:48 (17004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-14 02:31:48 (17004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-14 02:31:48 (17004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-14 02:31:48 (17004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-14 02:31:48 (17004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-14 02:31:48 (17004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-14 02:31:54 (17004): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-14 02:31:54 (17004): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-14 02:31:57 (17004): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-14 02:31:57 (17004): Guest Log: 00:00:00.000113 main     Log opened 2026-01-14T02:31:55.677927000Z
2026-01-14 02:31:57 (17004): Guest Log: 00:00:00.000177 main     OS Product: Linux
2026-01-14 02:31:57 (17004): Guest Log: 00:00:00.000195 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-14 02:31:57 (17004): Guest Log: 00:00:00.000211 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-14 02:31:57 (17004): Guest Log: 00:00:00.000226 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-14 02:31:57 (17004): Guest Log: 00:00:00.000226 main     Process ID: 1372
2026-01-14 02:31:57 (17004): Guest Log: 00:00:00.000226 main     Package type: LINUX_64BITS_GENERIC
2026-01-14 02:31:57 (17004): Guest Log: 00:00:00.000770 main     5.2.32 r132073 started. Verbose level = 0
2026-01-14 02:31:57 (17004): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-14 02:31:57 (17004): Guest Log: [INFO] Mounting shared directory
2026-01-14 02:31:57 (17004): Guest Log: [INFO] Checking for init_data.xml
2026-01-14 02:32:02 (17004): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-14 02:32:02 (17004): Guest Log: [INFO] Detected branch: prod
2026-01-14 02:32:03 (17004): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-14 02:32:03 (17004): Guest Log: Copying input files
2026-01-14 02:32:05 (17004): Guest Log: Copied input files into RunAtlas.
2026-01-14 02:32:05 (17004): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-14 02:32:05 (17004): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-14 02:32:05 (17004): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-14 02:32:05 (17004): Guest Log: Further information can be found at the LHC@home message board.
2026-01-14 02:32:07 (17004): Guest Log: 00:00:10.013888 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 741 563 000ns (GuestNow=1 768 350 726 938 036 000 ns GuestLast=1 768 357 915 679 599 000 ns fSetTimeLastLoop=true )
2026-01-14 02:32:14 (17004): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-14 02:32:15 (17004): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-14 02:32:15 (17004): Guest Log: 2.6.3.0 1649 0 32192 155112 3 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-01-14 02:32:15 (17004): Guest Log: copied the webapp to /var/www
2026-01-14 02:32:15 (17004): Guest Log: ATHENA_PROC_NUMBER=8
2026-01-14 02:32:15 (17004): Guest Log: ATHENA_CORE_NUMBER=8
2026-01-14 02:32:15 (17004): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-14 02:32:15 (17004): Guest Log:  *** Starting ATLAS job. (PandaID=6969261394 taskID=48215263) ***
2026-01-14 03:12:18 (17004): VM state change detected. (old = 'running', new = 'paused')
2026-01-14 14:24:19 (17004): VM state change detected. (old = 'paused', new = 'running')
2026-01-14 14:24:21 (17004): Guest Log: 00:40:22.597944 timesync vgsvcTimeSyncWorker: Radical host time change: 40 388 217 000 000ns (HostNow=1 768 393 459 875 000 000 ns HostLast=1 768 353 071 658 000 000 ns)
2026-01-14 14:24:31 (17004): Guest Log: 00:40:32.599038 timesync vgsvcTimeSyncWorker: Radical guest time change: 40 330 354 222 000ns (GuestNow=1 768 393 469 876 226 000 ns GuestLast=1 768 353 139 522 004 000 ns fSetTimeLastLoop=true )
2026-01-14 14:35:05 (17004): Guest Log:  *** Job finished ***
2026-01-14 14:35:05 (17004): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-14 14:35:05 (17004): Guest Log: 2026-01-14 12:34:32,009 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-14 14:35:05 (17004): Guest Log: 2026-01-14 12:34:32,009 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-14 14:35:05 (17004): Guest Log: 2026-01-14 12:34:55,904 | INFO     | [monitor] cgroup control has ended
2026-01-14 14:35:05 (17004): Guest Log: 2026-01-14 12:34:57,505 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140451740796736)>', '<ExcThread(monitor, started 140450732177152)>']
2026-01-14 14:35:05 (17004): Guest Log: 2026-01-14 12:34:58,477 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-14 14:35:05 (17004): Guest Log: 2026-01-14 12:34:58,477 | INFO     | [monitor] control thread has ended
2026-01-14 14:35:05 (17004): Guest Log: 2026-01-14 12:35:02,510 | INFO     | all workflow threads have been joined
2026-01-14 14:35:05 (17004): Guest Log: 2026-01-14 12:35:02,510 | INFO     | end of generic workflow (traces error code: 0)
2026-01-14 14:35:05 (17004): Guest Log: 2026-01-14 12:35:02,510 | INFO     | traces error code: 0
2026-01-14 14:35:05 (17004): Guest Log: 2026-01-14 12:35:02,511 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-14 14:35:05 (17004): Guest Log: 2026-01-14 12:35:02,584 [wrapper] ==== pilot stdout END ====
2026-01-14 14:35:05 (17004): Guest Log: 2026-01-14 12:35:02,588 [wrapper] ==== wrapper stdout RESUME ====
2026-01-14 14:35:05 (17004): Guest Log: 2026-01-14 12:35:02,592 [wrapper] pilotpid: 6099
2026-01-14 14:35:05 (17004): Guest Log: 2026-01-14 12:35:02,596 [wrapper] Pilot exit status: 0
2026-01-14 14:35:05 (17004): Guest Log: 2026-01-14 12:35:02,641 [wrapper] pandaids: 6969261394
2026-01-14 14:35:05 (17004): Guest Log: 2026-01-14 12:35:02,668 [wrapper] cleanup supervisor_pilot 24114 6100
2026-01-14 14:35:05 (17004): Guest Log: 2026-01-14 12:35:02,672 [wrapper] Test setup, not cleaning
2026-01-14 14:35:05 (17004): Guest Log: 2026-01-14 12:35:02,677 [wrapper] apfmon messages muted
2026-01-14 14:35:05 (17004): Guest Log: 2026-01-14 12:35:02,681 [wrapper] ==== wrapper stdout END ====
2026-01-14 14:35:05 (17004): Guest Log: 2026-01-14 12:35:02,684 [wrapper] ==== wrapper stderr END ====
2026-01-14 14:35:05 (17004): Guest Log:  *** Error codes and diagnostics ***
2026-01-14 14:35:05 (17004): Guest Log:     "exeErrorCode": 0,
2026-01-14 14:35:05 (17004): Guest Log:     "exeErrorDiag": "",
2026-01-14 14:35:05 (17004): Guest Log:     "pilotErrorCode": 0,
2026-01-14 14:35:05 (17004): Guest Log:     "pilotErrorDiag": "",
2026-01-14 14:35:05 (17004): Guest Log:  *** Listing of results directory ***
2026-01-14 14:35:05 (17004): Guest Log: total 151596
2026-01-14 14:35:05 (17004): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 13 21:58 runpilot2-wrapper.sh
2026-01-14 14:35:05 (17004): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Jan 13 22:05 pilot3.tar.gz
2026-01-14 14:35:05 (17004): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jan 13 22:07 queuedata.json
2026-01-14 14:35:05 (17004): Guest Log: -rwxr-xr-x. 1 atlas atlas      8712 Jan 14 00:32 init_data.xml
2026-01-14 14:35:05 (17004): Guest Log: -rwxr-xr-x. 1 atlas atlas    592391 Jan 14 00:32 input.tar.gz
2026-01-14 14:35:05 (17004): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Jan 14 00:32 start_atlas.sh
2026-01-14 14:35:05 (17004): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 14 00:32 EVNT.32794306._000107.pool.root.1 -> /data/./ATLAS.root_0
2026-01-14 14:35:05 (17004): Guest Log: -rw-r--r--. 1 atlas atlas      2505 Jan 14 00:32 pandaJob.out
2026-01-14 14:35:05 (17004): Guest Log: -rw-------. 1 atlas atlas    997218 Jan 14 00:33 agis_schedconf.cvmfs.json
2026-01-14 14:35:05 (17004): Guest Log: drwx------. 5 atlas atlas      4096 Jan 14 00:33 pilot3
2026-01-14 14:35:05 (17004): Guest Log: -rw-------. 1 atlas atlas 149947469 Jan 14 12:33 HITS.48215263._002663.pool.root.1
2026-01-14 14:35:05 (17004): Guest Log: -rw-------. 1 atlas atlas      1026 Jan 14 12:33 memory_monitor_summary.json
2026-01-14 14:35:05 (17004): Guest Log: -rw-------. 1 atlas atlas   1516246 Jan 14 12:33 agis_ddmendpoints.agis.ALL.json
2026-01-14 14:35:05 (17004): Guest Log: -rw-------. 1 atlas atlas    297121 Jan 14 12:33 log.48215263._002663.job.log.tgz.1
2026-01-14 14:35:05 (17004): Guest Log: -rw-------. 1 atlas atlas      7781 Jan 14 12:34 heartbeat.json
2026-01-14 14:35:05 (17004): Guest Log: -rw-------. 1 atlas atlas        98 Jan 14 12:34 pilot_heartbeat.json
2026-01-14 14:35:05 (17004): Guest Log: -rw-------. 1 atlas atlas      5063 Jan 14 12:35 pilotlog.txt
2026-01-14 14:35:05 (17004): Guest Log: -rw-------. 1 atlas atlas    419023 Jan 14 12:35 log.48215263._002663.job.log.1
2026-01-14 14:35:05 (17004): Guest Log: -rw-------. 1 atlas atlas       357 Jan 14 12:35 output.list
2026-01-14 14:35:05 (17004): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 14 12:35 runtime_log
2026-01-14 14:35:05 (17004): Guest Log: -rw-------. 1 atlas atlas    737280 Jan 14 12:35 result.tar.gz
2026-01-14 14:35:05 (17004): Guest Log: -rw-r--r--. 1 atlas atlas      8762 Jan 14 12:35 runtime_log.err
2026-01-14 14:35:05 (17004): Guest Log: -rw-------. 1 atlas atlas       657 Jan 14 12:35 lOGNDmga1z8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmAgiKDmp4fXAo.diag
2026-01-14 14:35:05 (17004): Guest Log: Looking for outputfile HITS.48215263._002663.pool.root.1
2026-01-14 14:35:05 (17004): Guest Log: HITS file was successfully produced
2026-01-14 14:35:05 (17004): Guest Log: -rw-------. 1 atlas atlas 149947469 Jan 14 12:33 /home/atlas/RunAtlas/HITS.48215263._002663.pool.root.1
2026-01-14 14:35:06 (17004): Guest Log: Successfully finished the ATLAS job!
2026-01-14 14:35:06 (17004): Guest Log: Copying the results back to the shared directory!
2026-01-14 14:35:06 (17004): Guest Log:  *** Contents of shared directory: ***
2026-01-14 14:35:06 (17004): Guest Log: total 727468
2026-01-14 14:35:06 (17004): Guest Log: -rwxrwxrwx. 1 root root 593614893 Jan 14 00:31 ATLAS.root_0
2026-01-14 14:35:06 (17004): Guest Log: -rwxrwxrwx. 1 root root 149947469 Jan 14  2026 HITS.pool.root.1
2026-01-14 14:35:06 (17004): Guest Log: -rwxrwxrwx. 1 root root      8712 Jan 14 00:31 init_data.xml
2026-01-14 14:35:06 (17004): Guest Log: -rwxrwxrwx. 1 root root    592391 Jan 14 00:31 input.tar.gz
2026-01-14 14:35:06 (17004): Guest Log: -rwxrwxrwx. 1 root root    737280 Jan 14  2026 result.tar.gz
2026-01-14 14:35:06 (17004): Guest Log: -rwxrwxrwx. 1 root root     15847 Jan 14 00:31 start_atlas.sh
2026-01-14 14:35:06 (17004): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-14 14:35:06 (17004): VM Completion File Detected.
2026-01-14 14:35:06 (17004): Powering off VM.
2026-01-14 14:35:06 (17004): Successfully stopped VM.
2026-01-14 14:35:06 (17004): Deregistering VM. (boinc_5ac82dba5f1d1432, slot#1)
2026-01-14 14:35:06 (17004): Removing network bandwidth throttle group from VM.
2026-01-14 14:35:07 (17004): Removing VM from VirtualBox.
2026-01-14 14:35:12 (17004): called boinc_finish(0)

</stderr_txt>
]]>

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