Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:25:15 (9267): wrapper (7.7.26015): starting
05:25:15 (9267): wrapper: running run_atlas (--nthreads 8)
[2026-01-14 05:25:15] Arguments: --nthreads 8
[2026-01-14 05:25:15] Threads: 8
[2026-01-14 05:25:15] Checking for CVMFS
[2026-01-14 05:25:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 05:25:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 05:25:17] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 05:25:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 05:25:19] 2.11.2.0 17161 22375 103140 155118 0 61 23469827 25165825 96 130560 0 3292103 99.494 3507305 3090 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-14 05:25:19] CVMFS is ok
[2026-01-14 05:25:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 05:25:19] Checking for apptainer binary...
[2026-01-14 05:25:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 05:25:19] Running /usr/bin/apptainer --version
[2026-01-14 05:25:19] apptainer version 1.3.2-1.el7
[2026-01-14 05:25:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 05:25:48] cg-vwn491.simple-grid.lan
[2026-01-14 05:25:48] apptainer works
[2026-01-14 05:25:48] Set ATHENA_PROC_NUMBER=8
[2026-01-14 05:25:48] Set ATHENA_CORE_NUMBER=8
[2026-01-14 05:25:48] Starting ATLAS job with PandaID=6969260163
[2026-01-14 05:25:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 08:12:47]  *** The last 200 lines of the pilot log: ***
[2026-01-14 08:12:47] 2026-01-14 07:11:52,393 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-14 08:12:47] 2026-01-14 07:11:52,394 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2026-01-14 08:12:47] 2026-01-14 07:11:52,396 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6969260163/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 08:12:47] 2026-01-14 07:11:52,396 | INFO     | extracted standard info from prmon json
[2026-01-14 08:12:47] 2026-01-14 07:11:52,396 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 08:12:47] 2026-01-14 07:11:52,397 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 08:12:47] 2026-01-14 07:11:52,397 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 08:12:47] 2026-01-14 07:11:52,397 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 08:12:47] 2026-01-14 07:11:52,400 | INFO     | fitting pss+swap vs Time
[2026-01-14 08:12:47] 2026-01-14 07:11:52,401 | INFO     | sum of square deviations: 1005179777.0
[2026-01-14 08:12:47] 2026-01-14 07:11:52,402 | INFO     | sum of deviations: 53914417174.50003
[2026-01-14 08:12:47] 2026-01-14 07:11:52,402 | INFO     | mean x: 1768370050.5
[2026-01-14 08:12:47] 2026-01-14 07:11:52,402 | INFO     | mean y: 2420950.9256756757
[2026-01-14 08:12:47] 2026-01-14 07:11:52,402 | INFO     | intersect: -94846921229.53156
[2026-01-14 08:12:47] 2026-01-14 07:11:52,402 | INFO     | chi2: 7.528538003722986
[2026-01-14 08:12:47] 2026-01-14 07:11:52,403 | INFO     | sum of square deviations: 906703512.0
[2026-01-14 08:12:47] 2026-01-14 07:11:52,404 | INFO     | sum of deviations: 61738061265.0
[2026-01-14 08:12:47] 2026-01-14 07:11:52,404 | INFO     | mean x: 1768369898.0
[2026-01-14 08:12:47] 2026-01-14 07:11:52,404 | INFO     | mean y: 2432644.755244755
[2026-01-14 08:12:47] 2026-01-14 07:11:52,404 | INFO     | intersect: -120407081222.77876
[2026-01-14 08:12:47] 2026-01-14 07:11:52,404 | INFO     | chi2: 6.861257882318869
[2026-01-14 08:12:47] 2026-01-14 07:11:52,405 | INFO     | current chi2=6.861257882318869 (change=8.863342671234918 %)
[2026-01-14 08:12:47] 2026-01-14 07:11:52,405 | INFO     | right removable region: 142
[2026-01-14 08:12:47] 2026-01-14 07:11:52,405 | INFO     | sum of square deviations: 906703512.0
[2026-01-14 08:12:47] 2026-01-14 07:11:52,406 | INFO     | sum of deviations: 3269923666.0
[2026-01-14 08:12:47] 2026-01-14 07:11:52,406 | INFO     | mean x: 1768370203.0
[2026-01-14 08:12:47] 2026-01-14 07:11:52,406 | INFO     | mean y: 2499283.3776223776
[2026-01-14 08:12:47] 2026-01-14 07:11:52,406 | INFO     | intersect: -6374927847.4427595
[2026-01-14 08:12:47] 2026-01-14 07:11:52,407 | INFO     | chi2: 2.4282350096845793
[2026-01-14 08:12:47] 2026-01-14 07:11:52,407 | INFO     | current chi2=2.4282350096845793 (change=67.74626084793918 %)
[2026-01-14 08:12:47] 2026-01-14 07:11:52,407 | INFO     | sum of square deviations: 814878534.5
[2026-01-14 08:12:47] 2026-01-14 07:11:52,408 | INFO     | sum of deviations: -22335126545.5
[2026-01-14 08:12:47] 2026-01-14 07:11:52,408 | INFO     | mean x: 1768370355.5
[2026-01-14 08:12:47] 2026-01-14 07:11:52,408 | INFO     | mean y: 2541398.4420289854
[2026-01-14 08:12:47] 2026-01-14 07:11:52,408 | INFO     | intersect: 48472066606.438934
[2026-01-14 08:12:47] 2026-01-14 07:11:52,409 | INFO     | chi2: 0.9329723115844394
[2026-01-14 08:12:47] 2026-01-14 07:11:52,409 | INFO     | current chi2=0.9329723115844394 (change=61.5781706522043 %)
[2026-01-14 08:12:47] 2026-01-14 07:11:52,409 | INFO     | sum of square deviations: 729472282.0
[2026-01-14 08:12:47] 2026-01-14 07:11:52,410 | INFO     | sum of deviations: -21351514691.0
[2026-01-14 08:12:47] 2026-01-14 07:11:52,410 | INFO     | mean x: 1768370508.0
[2026-01-14 08:12:47] 2026-01-14 07:11:52,410 | INFO     | mean y: 2539515.5939849624
[2026-01-14 08:12:47] 2026-01-14 07:11:52,410 | INFO     | intersect: 51762407316.42858
[2026-01-14 08:12:47] 2026-01-14 07:11:52,418 | INFO     | chi2: 0.9100460546972795
[2026-01-14 08:12:47] 2026-01-14 07:11:52,418 | INFO     | current chi2=0.9100460546972795 (change=2.4573351858883026 %)
[2026-01-14 08:12:47] 2026-01-14 07:11:52,418 | INFO     | left removable region: 30
[2026-01-14 08:12:47] 2026-01-14 07:11:52,418 | INFO     | sum of square deviations: 435610028.0
[2026-01-14 08:12:47] 2026-01-14 07:11:52,419 | INFO     | sum of deviations: 1632657984.9999998
[2026-01-14 08:12:47] 2026-01-14 07:11:52,419 | INFO     | mean x: 1768370782.5
[2026-01-14 08:12:47] 2026-01-14 07:11:52,419 | INFO     | mean y: 2526261.660714286
[2026-01-14 08:12:47] 2026-01-14 07:11:52,419 | INFO     | intersect: -6625293331.3476515
[2026-01-14 08:12:47] 2026-01-14 07:11:52,419 | INFO     | chi2: 0.00018110960324441453
[2026-01-14 08:12:47] 2026-01-14 07:11:52,420 | INFO     | current memory leak: 3.75 B/s (using 112 data points, chi2=0.00)
[2026-01-14 08:12:47] 2026-01-14 07:11:52,420 | INFO     | could have reported an average CPU frequency of 2249 MHz (8 samples)
[2026-01-14 08:12:47] 2026-01-14 07:11:52,420 | INFO     | ..............................
[2026-01-14 08:12:47] 2026-01-14 07:11:52,421 | INFO     | . Timing measurements:
[2026-01-14 08:12:47] 2026-01-14 07:11:52,421 | INFO     | . get job = 0 s
[2026-01-14 08:12:47] 2026-01-14 07:11:52,421 | INFO     | . initial setup = 12 s
[2026-01-14 08:12:47] 2026-01-14 07:11:52,421 | INFO     | . payload setup = 161 s
[2026-01-14 08:12:47] 2026-01-14 07:11:52,421 | INFO     | . stage-in = 0 s
[2026-01-14 08:12:47] 2026-01-14 07:11:52,421 | INFO     | . payload execution = 9186 s
[2026-01-14 08:12:47] 2026-01-14 07:11:52,421 | INFO     | . stage-out = 3 s
[2026-01-14 08:12:47] 2026-01-14 07:11:52,421 | INFO     | . log creation = 1 s
[2026-01-14 08:12:47] 2026-01-14 07:11:52,421 | INFO     | ..............................
[2026-01-14 08:12:47] 2026-01-14 07:11:52,560 | INFO     | 
[2026-01-14 08:12:47] 2026-01-14 07:11:52,561 | INFO     | job summary report
[2026-01-14 08:12:47] 2026-01-14 07:11:52,561 | INFO     | --------------------------------------------------
[2026-01-14 08:12:47] 2026-01-14 07:11:52,561 | INFO     | PanDA job id: 6969260163
[2026-01-14 08:12:47] 2026-01-14 07:11:52,561 | INFO     | task id: 48215263
[2026-01-14 08:12:47] 2026-01-14 07:11:52,561 | INFO     | errors: (none)
[2026-01-14 08:12:47] 2026-01-14 07:11:52,561 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 08:12:47] 2026-01-14 07:11:52,561 | INFO     | pilot state: finished 
[2026-01-14 08:12:47] 2026-01-14 07:11:52,562 | INFO     | transexitcode: 0
[2026-01-14 08:12:47] 2026-01-14 07:11:52,562 | INFO     | exeerrorcode: 0
[2026-01-14 08:12:47] 2026-01-14 07:11:52,562 | INFO     | exeerrordiag: 
[2026-01-14 08:12:47] 2026-01-14 07:11:52,562 | INFO     | exitcode: 0
[2026-01-14 08:12:47] 2026-01-14 07:11:52,562 | INFO     | exitmsg: OK
[2026-01-14 08:12:47] 2026-01-14 07:11:52,562 | INFO     | cpuconsumptiontime: 32799 s
[2026-01-14 08:12:47] 2026-01-14 07:11:52,562 | INFO     | nevents: 400
[2026-01-14 08:12:47] 2026-01-14 07:11:52,562 | INFO     | neventsw: 0
[2026-01-14 08:12:47] 2026-01-14 07:11:52,562 | INFO     | pid: 19480
[2026-01-14 08:12:47] 2026-01-14 07:11:52,562 | INFO     | pgrp: 19480
[2026-01-14 08:12:47] 2026-01-14 07:11:52,563 | INFO     | corecount: 8
[2026-01-14 08:12:47] 2026-01-14 07:11:52,563 | INFO     | event service: False
[2026-01-14 08:12:47] 2026-01-14 07:11:52,563 | INFO     | sizes: {0: 2283772, 1: 2283971, 12: 2283971, 23: 2283999, 33: 2284027, 44: 2284083, 55: 2284239, 66: 2284267, 76: 2284295, 87: 2284351, 98: 2284379, 103: 2284949, 
[2026-01-14 08:12:47] 2026-01-14 07:11:52,563 | INFO     | --------------------------------------------------
[2026-01-14 08:12:47] 2026-01-14 07:11:52,563 | INFO     | 
[2026-01-14 08:12:47] 2026-01-14 07:11:52,563 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-01-14 08:12:47] 2026-01-14 07:11:53,000 | INFO     | time since job start (9692s) is within the limit (349056.0s)
[2026-01-14 08:12:47] 2026-01-14 07:11:53,100 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 08:12:47] 2026-01-14 07:11:53,100 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 08:12:47] 2026-01-14 07:11:53,100 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 08:12:47] 2026-01-14 07:11:53,100 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 08:12:47] 2026-01-14 07:11:53,100 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 08:12:47] 2026-01-14 07:11:53,100 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 08:12:47] 2026-01-14 07:11:53,101 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 08:12:47] 2026-01-14 07:11:53,101 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 08:12:47] 2026-01-14 07:11:53,101 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 08:12:47] 2026-01-14 07:11:53,101 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 08:12:47] 2026-01-14 07:11:53,101 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 08:12:47] 2026-01-14 07:11:53,101 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 08:12:47] 2026-01-14 07:11:53,101 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 08:12:47] 2026-01-14 07:11:53,101 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 08:12:47] 2026-01-14 07:11:53,101 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 08:12:47] 2026-01-14 07:11:53,102 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 08:12:47] 2026-01-14 07:11:53,102 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 08:12:47] 2026-01-14 07:11:53,102 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 08:12:47] 2026-01-14 07:11:53,102 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 08:12:47] 2026-01-14 07:11:53,102 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 08:12:47] 2026-01-14 07:11:53,102 | INFO     | job 6969260163 has completed (purged errors)
[2026-01-14 08:12:47] 2026-01-14 07:11:53,102 | INFO     | overall cleanup function is called
[2026-01-14 08:12:47] 2026-01-14 07:11:54,111 | INFO     | --- collectZombieJob: --- 10, [19480]
[2026-01-14 08:12:47] 2026-01-14 07:11:54,112 | INFO     | zombie collector waiting for pid 19480
[2026-01-14 08:12:47] 2026-01-14 07:11:54,112 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 08:12:47] 2026-01-14 07:11:54,112 | INFO     | collected zombie processes
[2026-01-14 08:12:47] 2026-01-14 07:11:54,112 | INFO     | will attempt to kill all subprocesses of pid=19480
[2026-01-14 08:12:47] 2026-01-14 07:11:54,183 | INFO     | process IDs to be killed: [19480] (in reverse order)
[2026-01-14 08:12:47] 2026-01-14 07:11:55,066 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 08:12:47] 2026-01-14 07:11:55,066 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 08:12:47] 2026-01-14 07:11:55,068 | INFO     | did not find any defunct processes belonging to 19480
[2026-01-14 08:12:47] 2026-01-14 07:11:55,070 | INFO     | did not find any defunct processes belonging to 19480
[2026-01-14 08:12:47] 2026-01-14 07:11:55,070 | INFO     | ready for new job
[2026-01-14 08:12:47] 2026-01-14 07:11:55,070 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 08:12:47] 2026-01-14 07:11:55,072 | INFO     | ***************************************
[2026-01-14 08:12:47] 2026-01-14 07:11:55,072 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 08:12:47] 2026-01-14 07:11:55,072 | INFO     | ***************************************
[2026-01-14 08:12:47] 2026-01-14 07:11:55,072 | INFO     | 
[2026-01-14 08:12:47] 2026-01-14 07:11:55,073 | INFO     | pilot is running in a VM
[2026-01-14 08:12:47] 2026-01-14 07:11:55,073 | INFO     | architecture information:
[2026-01-14 08:12:47] 2026-01-14 07:11:55,077 | INFO     | executing command: cat /etc/os-release
[2026-01-14 08:12:47] 2026-01-14 07:11:55,412 | INFO     | cat /etc/os-release:
[2026-01-14 08:12:47] NAME="CentOS Linux"
[2026-01-14 08:12:47] VERSION="7 (Core)"
[2026-01-14 08:12:47] ID="centos"
[2026-01-14 08:12:47] ID_LIKE="rhel fedora"
[2026-01-14 08:12:47] VERSION_ID="7"
[2026-01-14 08:12:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 08:12:47] ANSI_COLOR="0;31"
[2026-01-14 08:12:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 08:12:47] HOME_URL="https://www.centos.org/"
[2026-01-14 08:12:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 08:12:47] 
[2026-01-14 08:12:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 08:12:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 08:12:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 08:12:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 08:12:47] 
[2026-01-14 08:12:47] 2026-01-14 07:11:55,412 | INFO     | ***************************************
[2026-01-14 08:12:47] 2026-01-14 07:11:55,920 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-01-14 08:12:47] 2026-01-14 07:11:56,182 | INFO     | sufficient remaining disk space (494097399808 B)
[2026-01-14 08:12:47] 2026-01-14 07:11:56,182 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 08:12:47] 2026-01-14 07:11:56,183 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 08:12:47] 2026-01-14 07:11:56,183 | INFO     | update_server=False
[2026-01-14 08:12:47] 2026-01-14 07:11:56,183 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 08:12:47] 2026-01-14 07:11:56,188 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 08:12:47] 2026-01-14 07:11:56,189 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 08:12:47] 2026-01-14 07:11:56,189 | INFO     | aborting loop
[2026-01-14 08:12:47] 2026-01-14 07:11:56,413 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 08:12:47] 2026-01-14 07:11:56,950 | INFO     | all data control threads have been joined
[2026-01-14 08:12:47] 2026-01-14 07:11:57,188 | INFO     | all payload control threads have been joined
[2026-01-14 08:12:47] 2026-01-14 07:11:57,192 | INFO     | [job] retrieve thread has finished
[2026-01-14 08:12:47] 2026-01-14 07:11:57,196 | INFO     | [job] job monitor thread has finished
[2026-01-14 08:12:47] 2026-01-14 07:11:57,236 | INFO     | [payload] failed_post thread has finished
[2026-01-14 08:12:47] 2026-01-14 07:11:57,483 | INFO     | [payload] validate_post thread has finished
[2026-01-14 08:12:47] 2026-01-14 07:11:57,579 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 08:12:47] 2026-01-14 07:11:57,681 | INFO     | all job control threads have been joined
[2026-01-14 08:12:47] 2026-01-14 07:11:57,699 | INFO     | [data] copytool_in thread has finished
[2026-01-14 08:12:47] 2026-01-14 07:11:57,900 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 08:12:47] 2026-01-14 07:11:57,957 | INFO     | [data] control thread has finished
[2026-01-14 08:12:47] 2026-01-14 07:11:57,990 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 08:12:47] 2026-01-14 07:11:58,194 | INFO     | [payload] control thread has finished
[2026-01-14 08:12:47] 2026-01-14 07:11:58,198 | INFO     | [data] copytool_out thread has finished
[2026-01-14 08:12:47] 2026-01-14 07:11:58,216 | INFO     | [job] validate thread has finished
[2026-01-14 08:12:47] 2026-01-14 07:11:58,285 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 08:12:47] 2026-01-14 07:11:58,309 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 08:12:47] 2026-01-14 07:11:58,585 | INFO     | [job] queue monitor thread has finished
[2026-01-14 08:12:47] 2026-01-14 07:11:58,687 | INFO     | [job] control thread has finished
[2026-01-14 08:12:47] 2026-01-14 07:12:00,422 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 08:12:47] 2026-01-14 07:12:26,098 | INFO     | PID=12998 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-14 08:12:47] 2026-01-14 07:12:26,098 | INFO     | .. there are 2 such processes running
[2026-01-14 08:12:47] 2026-01-14 07:12:26,100 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 08:12:47] 2026-01-14 07:12:26,100 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 08:12:47] 2026-01-14 07:12:26,100 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 08:12:47] 2026-01-14 07:12:37,393 | INFO     | [monitor] cgroup control has ended
[2026-01-14 08:12:47] 2026-01-14 07:12:37,484 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140432914872128)>', '<ExcThread(monitor, started 140432696276736)>']
[2026-01-14 08:12:47] 2026-01-14 07:12:38,171 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 08:12:47] 2026-01-14 07:12:38,172 | INFO     | [monitor] control thread has ended
[2026-01-14 08:12:47] 2026-01-14 07:12:42,509 | INFO     | all workflow threads have been joined
[2026-01-14 08:12:47] 2026-01-14 07:12:42,510 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 08:12:47] 2026-01-14 07:12:42,510 | INFO     | traces error code: 0
[2026-01-14 08:12:47] 2026-01-14 07:12:42,510 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 08:12:47] 2026-01-14 07:12:42,942 [wrapper] ==== pilot stdout END ====
[2026-01-14 08:12:47] 2026-01-14 07:12:43,035 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 08:12:47] 2026-01-14 07:12:43,143 [wrapper] pilotpid: 12998
[2026-01-14 08:12:47] 2026-01-14 07:12:43,252 [wrapper] Pilot exit status: 0
[2026-01-14 08:12:47] 2026-01-14 07:12:43,774 [wrapper] pandaids: 6969260163
[2026-01-14 08:12:47] 2026-01-14 07:12:44,909 [wrapper] cleanup supervisor_pilot  3800 12999
[2026-01-14 08:12:47] 2026-01-14 07:12:45,011 [wrapper] Test setup, not cleaning
[2026-01-14 08:12:47] 2026-01-14 07:12:45,097 [wrapper] apfmon messages muted
[2026-01-14 08:12:47] 2026-01-14 07:12:45,185 [wrapper] ==== wrapper stdout END ====
[2026-01-14 08:12:47] 2026-01-14 07:12:45,274 [wrapper] ==== wrapper stderr END ====
[2026-01-14 08:12:47]  *** Error codes and diagnostics ***
[2026-01-14 08:12:47]     "exeErrorCode": 0,
[2026-01-14 08:12:47]     "exeErrorDiag": "",
[2026-01-14 08:12:47]     "pilotErrorCode": 0,
[2026-01-14 08:12:47]     "pilotErrorDiag": "",
[2026-01-14 08:12:47]  *** Listing of results directory ***
[2026-01-14 08:12:47] total 736212
[2026-01-14 08:12:47] -rwx------. 1 boinc boinc     36322 Jan 13 22:58 runpilot2-wrapper.sh
[2026-01-14 08:12:47] -rw-r--r--. 1 boinc boinc    579449 Jan 13 23:05 pilot3.tar.gz
[2026-01-14 08:12:47] -rw-r--r--. 1 boinc boinc      5112 Jan 13 23:12 queuedata.json
[2026-01-14 08:12:47] -rw-r--r--. 1 boinc boinc       100 Jan 14 05:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 08:12:47] -rwxr-xr-x. 1 boinc boinc      7986 Jan 14 05:25 run_atlas
[2026-01-14 08:12:47] -rw-r--r--. 1 boinc boinc       105 Jan 14 05:25 job.xml
[2026-01-14 08:12:47] -rw-r--r--. 2 boinc boinc 597695287 Jan 14 05:25 EVNT.32794306._000091.pool.root.1
[2026-01-14 08:12:47] -rw-r--r--. 2 boinc boinc     15847 Jan 14 05:25 start_atlas.sh
[2026-01-14 08:12:47] drwxrwx--x. 2 boinc boinc        68 Jan 14 05:25 shared
[2026-01-14 08:12:47] -rw-r--r--. 2 boinc boinc    592387 Jan 14 05:25 input.tar.gz
[2026-01-14 08:12:47] -rw-r--r--. 1 boinc boinc      6390 Jan 14 05:25 init_data.xml
[2026-01-14 08:12:47] -rw-r--r--. 1 boinc boinc         0 Jan 14 05:25 boinc_lockfile
[2026-01-14 08:12:47] -rw-r--r--. 1 boinc boinc      2504 Jan 14 05:25 pandaJob.out
[2026-01-14 08:12:47] -rw-------. 1 boinc boinc    997226 Jan 14 05:30 agis_schedconf.cvmfs.json
[2026-01-14 08:12:47] -rw-------. 1 boinc boinc   1516246 Jan 14 05:30 agis_ddmendpoints.agis.ALL.json
[2026-01-14 08:12:47] drwx------. 5 boinc boinc      4096 Jan 14 05:30 pilot3
[2026-01-14 08:12:47] -rw-------. 1 boinc boinc 148895194 Jan 14 08:08 HITS.48215263._002262.pool.root.1
[2026-01-14 08:12:47] -rw-r--r--. 1 boinc boinc       531 Jan 14 08:08 boinc_task_state.xml
[2026-01-14 08:12:47] -rw-------. 1 boinc boinc      1015 Jan 14 08:09 memory_monitor_summary.json
[2026-01-14 08:12:47] -rw-------. 1 boinc boinc    387135 Jan 14 08:09 log.48215263._002262.job.log.tgz.1
[2026-01-14 08:12:47] -rw-------. 1 boinc boinc      7770 Jan 14 08:11 heartbeat.json
[2026-01-14 08:12:47] -rw-------. 1 boinc boinc        95 Jan 14 08:12 pilot_heartbeat.json
[2026-01-14 08:12:47] -rw-r--r--. 1 boinc boinc      8192 Jan 14 08:12 boinc_mmap_file
[2026-01-14 08:12:47] -rw-r--r--. 1 boinc boinc        28 Jan 14 08:12 wrapper_checkpoint.txt
[2026-01-14 08:12:47] -rw-------. 1 boinc boinc      4884 Jan 14 08:12 pilotlog.txt
[2026-01-14 08:12:47] -rw-------. 1 boinc boinc   1306103 Jan 14 08:12 log.48215263._002262.job.log.1
[2026-01-14 08:12:47] -rw-------. 1 boinc boinc       357 Jan 14 08:12 output.list
[2026-01-14 08:12:47] -rw-r--r--. 1 boinc boinc       620 Jan 14 08:12 runtime_log
[2026-01-14 08:12:47] -rw-------. 1 boinc boinc   1710080 Jan 14 08:12 result.tar.gz
[2026-01-14 08:12:47] -rw-r--r--. 1 boinc boinc      8817 Jan 14 08:12 runtime_log.err
[2026-01-14 08:12:47] -rw-------. 1 boinc boinc       654 Jan 14 08:12 aShNDmSa1z8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmMooKDmEg4tXn.diag
[2026-01-14 08:12:47] -rw-r--r--. 1 boinc boinc     20756 Jan 14 08:12 stderr.txt
[2026-01-14 08:12:47] HITS file was successfully produced:
[2026-01-14 08:12:47] -rw-------. 1 boinc boinc 148895194 Jan 14 08:08 shared/HITS.pool.root.1
[2026-01-14 08:12:47]  *** Contents of shared directory: ***
[2026-01-14 08:12:47] total 731364
[2026-01-14 08:12:47] -rw-r--r--. 2 boinc boinc 597695287 Jan 14 05:25 ATLAS.root_0
[2026-01-14 08:12:47] -rw-r--r--. 2 boinc boinc     15847 Jan 14 05:25 start_atlas.sh
[2026-01-14 08:12:47] -rw-r--r--. 2 boinc boinc    592387 Jan 14 05:25 input.tar.gz
[2026-01-14 08:12:47] -rw-------. 1 boinc boinc 148895194 Jan 14 08:08 HITS.pool.root.1
[2026-01-14 08:12:47] -rw-------. 1 boinc boinc   1710080 Jan 14 08:12 result.tar.gz
08:12:49 (9267): run_atlas exited; CPU time 32895.629115
08:12:49 (9267): called boinc_finish(0)

</stderr_txt>
]]>

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