Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:46:21 (811): wrapper (7.7.26015): starting
00:46:21 (811): wrapper: running run_atlas (--nthreads 8)
[2026-01-14 00:46:21] Arguments: --nthreads 8
[2026-01-14 00:46:21] Threads: 8
[2026-01-14 00:46:21] Checking for CVMFS
[2026-01-14 00:46:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 00:46:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 00:46:26] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 00:46:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 00:46:28] 2.11.2.0 26786 41852 102960 155111 1 11 21145852 25165825 96 130560 0 16178227 99.829 10288699 3132 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-14 00:46:28] CVMFS is ok
[2026-01-14 00:46:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 00:46:28] Checking for apptainer binary...
[2026-01-14 00:46:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 00:46:28] Running /usr/bin/apptainer --version
[2026-01-14 00:46:29] apptainer version 1.3.2-1.el7
[2026-01-14 00:46:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 00:46:33] cg-vwn410.simple-grid.lan
[2026-01-14 00:46:33] apptainer works
[2026-01-14 00:46:33] Set ATHENA_PROC_NUMBER=8
[2026-01-14 00:46:33] Set ATHENA_CORE_NUMBER=8
[2026-01-14 00:46:33] Starting ATLAS job with PandaID=6969263977
[2026-01-14 00:46:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 03:41:23]  *** The last 200 lines of the pilot log: ***
[2026-01-14 03:41:23] 2026-01-14 02:40:37,887 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-14 03:41:23] 2026-01-14 02:40:37,888 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-14 03:41:23] 2026-01-14 02:40:37,890 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6969263977/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 03:41:23] 2026-01-14 02:40:37,890 | INFO     | extracted standard info from prmon json
[2026-01-14 03:41:23] 2026-01-14 02:40:37,890 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 03:41:23] 2026-01-14 02:40:37,891 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 03:41:23] 2026-01-14 02:40:37,891 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 03:41:23] 2026-01-14 02:40:37,891 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 03:41:23] 2026-01-14 02:40:37,895 | INFO     | fitting pss+swap vs Time
[2026-01-14 03:41:23] 2026-01-14 02:40:37,895 | INFO     | sum of square deviations: 1199940638.0
[2026-01-14 03:41:23] 2026-01-14 02:40:37,896 | INFO     | sum of deviations: 84162123279.0
[2026-01-14 03:41:23] 2026-01-14 02:40:37,896 | INFO     | mean x: 1768353549.0
[2026-01-14 03:41:23] 2026-01-14 02:40:37,897 | INFO     | mean y: 2385107.770700637
[2026-01-14 03:41:23] 2026-01-14 02:40:37,897 | INFO     | intersect: -124027408265.88715
[2026-01-14 03:41:23] 2026-01-14 02:40:37,913 | INFO     | chi2: 8.23098895664856
[2026-01-14 03:41:23] 2026-01-14 02:40:37,914 | INFO     | sum of square deviations: 1088905998.0
[2026-01-14 03:41:23] 2026-01-14 02:40:37,915 | INFO     | sum of deviations: 91465558149.5
[2026-01-14 03:41:23] 2026-01-14 02:40:37,915 | INFO     | mean x: 1768353396.5
[2026-01-14 03:41:23] 2026-01-14 02:40:37,915 | INFO     | mean y: 2394766.4934210526
[2026-01-14 03:41:23] 2026-01-14 02:40:37,915 | INFO     | intersect: -148535156421.1313
[2026-01-14 03:41:23] 2026-01-14 02:40:37,915 | INFO     | chi2: 7.5474239253267585
[2026-01-14 03:41:23] 2026-01-14 02:40:37,916 | INFO     | current chi2=7.5474239253267585 (change=8.304774006161836 %)
[2026-01-14 03:41:23] 2026-01-14 02:40:37,916 | INFO     | right removable region: 151
[2026-01-14 03:41:23] 2026-01-14 02:40:37,916 | INFO     | sum of square deviations: 1088905998.0
[2026-01-14 03:41:23] 2026-01-14 02:40:37,917 | INFO     | sum of deviations: 30651327183.500004
[2026-01-14 03:41:23] 2026-01-14 02:40:37,917 | INFO     | mean x: 1768353701.5
[2026-01-14 03:41:23] 2026-01-14 02:40:37,917 | INFO     | mean y: 2458537.2434210526
[2026-01-14 03:41:23] 2026-01-14 02:40:37,918 | INFO     | intersect: -49774462501.2885
[2026-01-14 03:41:23] 2026-01-14 02:40:37,918 | INFO     | chi2: 3.056754542228523
[2026-01-14 03:41:23] 2026-01-14 02:40:37,918 | INFO     | current chi2=3.056754542228523 (change=62.862852102851654 %)
[2026-01-14 03:41:23] 2026-01-14 02:40:37,918 | INFO     | sum of square deviations: 984941258.0
[2026-01-14 03:41:23] 2026-01-14 02:40:37,919 | INFO     | sum of deviations: -5006543889.999998
[2026-01-14 03:41:23] 2026-01-14 02:40:37,919 | INFO     | mean x: 1768353854.0
[2026-01-14 03:41:23] 2026-01-14 02:40:37,920 | INFO     | mean y: 2510602.646258503
[2026-01-14 03:41:23] 2026-01-14 02:40:37,920 | INFO     | intersect: 8991210295.335596
[2026-01-14 03:41:23] 2026-01-14 02:40:37,920 | INFO     | chi2: 0.8796671821095864
[2026-01-14 03:41:23] 2026-01-14 02:40:37,920 | INFO     | current chi2=0.8796671821095864 (change=71.22218451114932 %)
[2026-01-14 03:41:23] 2026-01-14 02:40:37,921 | INFO     | sum of square deviations: 887813855.5
[2026-01-14 03:41:23] 2026-01-14 02:40:37,921 | INFO     | sum of deviations: -6835715022.0
[2026-01-14 03:41:23] 2026-01-14 02:40:37,922 | INFO     | mean x: 1768354006.5
[2026-01-14 03:41:23] 2026-01-14 02:40:37,922 | INFO     | mean y: 2513293.591549296
[2026-01-14 03:41:23] 2026-01-14 02:40:37,922 | INFO     | intersect: 13617939513.357203
[2026-01-14 03:41:23] 2026-01-14 02:40:37,922 | INFO     | chi2: 0.8167150252792061
[2026-01-14 03:41:23] 2026-01-14 02:40:37,922 | INFO     | current chi2=0.8167150252792061 (change=7.156360736274216 %)
[2026-01-14 03:41:23] 2026-01-14 02:40:37,922 | INFO     | left removable region: 30
[2026-01-14 03:41:23] 2026-01-14 02:40:37,923 | INFO     | sum of square deviations: 549294020.0
[2026-01-14 03:41:23] 2026-01-14 02:40:37,924 | INFO     | sum of deviations: 1320609862.0
[2026-01-14 03:41:23] 2026-01-14 02:40:37,924 | INFO     | mean x: 1768354281.0
[2026-01-14 03:41:23] 2026-01-14 02:40:37,924 | INFO     | mean y: 2531202.520661157
[2026-01-14 03:41:23] 2026-01-14 02:40:37,924 | INFO     | intersect: -4248937078.5258336
[2026-01-14 03:41:23] 2026-01-14 02:40:37,924 | INFO     | chi2: 0.00019786037736439527
[2026-01-14 03:41:23] 2026-01-14 02:40:37,924 | INFO     | current memory leak: 2.40 B/s (using 121 data points, chi2=0.00)
[2026-01-14 03:41:23] 2026-01-14 02:40:37,925 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-01-14 03:41:23] 2026-01-14 02:40:37,925 | INFO     | ..............................
[2026-01-14 03:41:23] 2026-01-14 02:40:37,925 | INFO     | . Timing measurements:
[2026-01-14 03:41:23] 2026-01-14 02:40:37,926 | INFO     | . get job = 0 s
[2026-01-14 03:41:23] 2026-01-14 02:40:37,926 | INFO     | . initial setup = 11 s
[2026-01-14 03:41:23] 2026-01-14 02:40:37,926 | INFO     | . payload setup = 150 s
[2026-01-14 03:41:23] 2026-01-14 02:40:37,926 | INFO     | . stage-in = 0 s
[2026-01-14 03:41:23] 2026-01-14 02:40:37,926 | INFO     | . payload execution = 9698 s
[2026-01-14 03:41:23] 2026-01-14 02:40:37,926 | INFO     | . stage-out = 3 s
[2026-01-14 03:41:23] 2026-01-14 02:40:37,926 | INFO     | . log creation = 1 s
[2026-01-14 03:41:23] 2026-01-14 02:40:37,926 | INFO     | ..............................
[2026-01-14 03:41:23] 2026-01-14 02:40:38,095 | INFO     | 
[2026-01-14 03:41:23] 2026-01-14 02:40:38,095 | INFO     | job summary report
[2026-01-14 03:41:23] 2026-01-14 02:40:38,095 | INFO     | --------------------------------------------------
[2026-01-14 03:41:23] 2026-01-14 02:40:38,095 | INFO     | PanDA job id: 6969263977
[2026-01-14 03:41:23] 2026-01-14 02:40:38,096 | INFO     | task id: 48215263
[2026-01-14 03:41:23] 2026-01-14 02:40:38,096 | INFO     | errors: (none)
[2026-01-14 03:41:23] 2026-01-14 02:40:38,096 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 03:41:23] 2026-01-14 02:40:38,096 | INFO     | pilot state: finished 
[2026-01-14 03:41:23] 2026-01-14 02:40:38,096 | INFO     | transexitcode: 0
[2026-01-14 03:41:23] 2026-01-14 02:40:38,096 | INFO     | exeerrorcode: 0
[2026-01-14 03:41:23] 2026-01-14 02:40:38,096 | INFO     | exeerrordiag: 
[2026-01-14 03:41:23] 2026-01-14 02:40:38,096 | INFO     | exitcode: 0
[2026-01-14 03:41:23] 2026-01-14 02:40:38,096 | INFO     | exitmsg: OK
[2026-01-14 03:41:23] 2026-01-14 02:40:38,097 | INFO     | cpuconsumptiontime: 34619 s
[2026-01-14 03:41:23] 2026-01-14 02:40:38,097 | INFO     | nevents: 400
[2026-01-14 03:41:23] 2026-01-14 02:40:38,097 | INFO     | neventsw: 0
[2026-01-14 03:41:23] 2026-01-14 02:40:38,097 | INFO     | pid: 11600
[2026-01-14 03:41:23] 2026-01-14 02:40:38,097 | INFO     | pgrp: 11600
[2026-01-14 03:41:23] 2026-01-14 02:40:38,097 | INFO     | corecount: 8
[2026-01-14 03:41:23] 2026-01-14 02:40:38,097 | INFO     | event service: False
[2026-01-14 03:41:23] 2026-01-14 02:40:38,097 | INFO     | sizes: {0: 2283117, 1: 2283802, 2: 2284001, 13: 2284001, 23: 2284057, 34: 2284085, 45: 2284241, 56: 2284269, 66: 2284297, 77: 2284325, 88: 2284381, 98: 2284689, 10
[2026-01-14 03:41:23] 2026-01-14 02:40:38,097 | INFO     | --------------------------------------------------
[2026-01-14 03:41:23] 2026-01-14 02:40:38,098 | INFO     | 
[2026-01-14 03:41:23] 2026-01-14 02:40:38,098 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-01-14 03:41:23] 2026-01-14 02:40:38,405 | INFO     | time since job start (10183s) is within the limit (349056.0s)
[2026-01-14 03:41:23] 2026-01-14 02:40:38,615 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 03:41:23] 2026-01-14 02:40:38,616 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 03:41:23] 2026-01-14 02:40:38,616 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 03:41:23] 2026-01-14 02:40:38,616 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 03:41:23] 2026-01-14 02:40:38,616 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 03:41:23] 2026-01-14 02:40:38,616 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 03:41:23] 2026-01-14 02:40:38,616 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 03:41:23] 2026-01-14 02:40:38,616 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 03:41:23] 2026-01-14 02:40:38,616 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 03:41:23] 2026-01-14 02:40:38,616 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 03:41:23] 2026-01-14 02:40:38,617 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 03:41:23] 2026-01-14 02:40:38,617 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 03:41:23] 2026-01-14 02:40:38,617 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 03:41:23] 2026-01-14 02:40:38,617 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 03:41:23] 2026-01-14 02:40:38,617 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 03:41:23] 2026-01-14 02:40:38,617 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 03:41:23] 2026-01-14 02:40:38,617 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 03:41:23] 2026-01-14 02:40:38,617 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 03:41:23] 2026-01-14 02:40:38,617 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 03:41:23] 2026-01-14 02:40:38,618 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 03:41:23] 2026-01-14 02:40:38,618 | INFO     | job 6969263977 has completed (purged errors)
[2026-01-14 03:41:23] 2026-01-14 02:40:38,618 | INFO     | overall cleanup function is called
[2026-01-14 03:41:23] 2026-01-14 02:40:39,627 | INFO     | --- collectZombieJob: --- 10, [11600]
[2026-01-14 03:41:23] 2026-01-14 02:40:39,627 | INFO     | zombie collector waiting for pid 11600
[2026-01-14 03:41:23] 2026-01-14 02:40:39,627 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 03:41:23] 2026-01-14 02:40:39,628 | INFO     | collected zombie processes
[2026-01-14 03:41:23] 2026-01-14 02:40:39,628 | INFO     | will attempt to kill all subprocesses of pid=11600
[2026-01-14 03:41:23] 2026-01-14 02:40:39,714 | INFO     | process IDs to be killed: [11600] (in reverse order)
[2026-01-14 03:41:23] 2026-01-14 02:40:40,875 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 03:41:23] 2026-01-14 02:40:40,876 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 03:41:23] 2026-01-14 02:40:40,878 | INFO     | did not find any defunct processes belonging to 11600
[2026-01-14 03:41:23] 2026-01-14 02:40:40,879 | INFO     | did not find any defunct processes belonging to 11600
[2026-01-14 03:41:23] 2026-01-14 02:40:40,879 | INFO     | ready for new job
[2026-01-14 03:41:23] 2026-01-14 02:40:40,880 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 03:41:23] 2026-01-14 02:40:40,881 | INFO     | ***************************************
[2026-01-14 03:41:23] 2026-01-14 02:40:40,881 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 03:41:23] 2026-01-14 02:40:40,882 | INFO     | ***************************************
[2026-01-14 03:41:23] 2026-01-14 02:40:40,882 | INFO     | 
[2026-01-14 03:41:23] 2026-01-14 02:40:40,882 | INFO     | pilot is running in a VM
[2026-01-14 03:41:23] 2026-01-14 02:40:40,882 | INFO     | architecture information:
[2026-01-14 03:41:23] 2026-01-14 02:40:40,891 | INFO     | executing command: cat /etc/os-release
[2026-01-14 03:41:23] 2026-01-14 02:40:41,036 | INFO     | cat /etc/os-release:
[2026-01-14 03:41:23] NAME="CentOS Linux"
[2026-01-14 03:41:23] VERSION="7 (Core)"
[2026-01-14 03:41:23] ID="centos"
[2026-01-14 03:41:23] ID_LIKE="rhel fedora"
[2026-01-14 03:41:23] VERSION_ID="7"
[2026-01-14 03:41:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 03:41:23] ANSI_COLOR="0;31"
[2026-01-14 03:41:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 03:41:23] HOME_URL="https://www.centos.org/"
[2026-01-14 03:41:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 03:41:23] 
[2026-01-14 03:41:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 03:41:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 03:41:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 03:41:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 03:41:23] 
[2026-01-14 03:41:23] 2026-01-14 02:40:41,037 | INFO     | ***************************************
[2026-01-14 03:41:23] 2026-01-14 02:40:41,540 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-01-14 03:41:23] 2026-01-14 02:40:41,827 | INFO     | sufficient remaining disk space (494669922304 B)
[2026-01-14 03:41:23] 2026-01-14 02:40:41,828 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 03:41:23] 2026-01-14 02:40:41,828 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 03:41:23] 2026-01-14 02:40:41,828 | INFO     | update_server=False
[2026-01-14 03:41:23] 2026-01-14 02:40:41,828 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 03:41:23] 2026-01-14 02:40:41,829 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 03:41:23] 2026-01-14 02:40:41,829 | INFO     | aborting loop
[2026-01-14 03:41:23] 2026-01-14 02:40:41,835 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 03:41:23] 2026-01-14 02:40:41,934 | INFO     | all payload control threads have been joined
[2026-01-14 03:41:23] 2026-01-14 02:40:42,485 | INFO     | all job control threads have been joined
[2026-01-14 03:41:23] 2026-01-14 02:40:42,759 | INFO     | all data control threads have been joined
[2026-01-14 03:41:23] 2026-01-14 02:40:42,834 | INFO     | [job] retrieve thread has finished
[2026-01-14 03:41:23] 2026-01-14 02:40:42,835 | INFO     | [job] job monitor thread has finished
[2026-01-14 03:41:23] 2026-01-14 02:40:42,940 | INFO     | [payload] control thread has finished
[2026-01-14 03:41:23] 2026-01-14 02:40:43,026 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 03:41:23] 2026-01-14 02:40:43,110 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 03:41:23] 2026-01-14 02:40:43,232 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 03:41:23] 2026-01-14 02:40:43,382 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 03:41:23] 2026-01-14 02:40:43,463 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 03:41:23] 2026-01-14 02:40:43,491 | INFO     | [job] control thread has finished
[2026-01-14 03:41:23] 2026-01-14 02:40:43,494 | INFO     | [data] copytool_in thread has finished
[2026-01-14 03:41:23] 2026-01-14 02:40:43,765 | INFO     | [data] control thread has finished
[2026-01-14 03:41:23] 2026-01-14 02:40:43,842 | INFO     | [data] copytool_out thread has finished
[2026-01-14 03:41:23] 2026-01-14 02:40:43,881 | INFO     | [job] validate thread has finished
[2026-01-14 03:41:23] 2026-01-14 02:40:44,015 | INFO     | [payload] validate_post thread has finished
[2026-01-14 03:41:23] 2026-01-14 02:40:44,116 | INFO     | [job] queue monitor thread has finished
[2026-01-14 03:41:23] 2026-01-14 02:40:44,341 | INFO     | [payload] failed_post thread has finished
[2026-01-14 03:41:23] 2026-01-14 02:40:44,858 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 03:41:23] 2026-01-14 02:40:48,867 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 03:41:23] 2026-01-14 02:41:11,539 | INFO     | PID=4924 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-14 03:41:23] 2026-01-14 02:41:11,539 | INFO     | .. there are 2 such processes running
[2026-01-14 03:41:23] 2026-01-14 02:41:11,540 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 03:41:23] 2026-01-14 02:41:11,541 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 03:41:23] 2026-01-14 02:41:11,541 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 03:41:23] 2026-01-14 02:41:12,528 | INFO     | [monitor] cgroup control has ended
[2026-01-14 03:41:23] 2026-01-14 02:41:13,609 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139877642766144)>', '<ExcThread(monitor, started 139877194647296)>']
[2026-01-14 03:41:23] 2026-01-14 02:41:14,559 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 03:41:23] 2026-01-14 02:41:14,559 | INFO     | [monitor] control thread has ended
[2026-01-14 03:41:23] 2026-01-14 02:41:18,635 | INFO     | all workflow threads have been joined
[2026-01-14 03:41:23] 2026-01-14 02:41:18,635 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 03:41:23] 2026-01-14 02:41:18,636 | INFO     | traces error code: 0
[2026-01-14 03:41:23] 2026-01-14 02:41:18,636 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 03:41:23] 2026-01-14 02:41:18,789 [wrapper] ==== pilot stdout END ====
[2026-01-14 03:41:23] 2026-01-14 02:41:18,797 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 03:41:23] 2026-01-14 02:41:18,808 [wrapper] pilotpid: 4924
[2026-01-14 03:41:23] 2026-01-14 02:41:18,817 [wrapper] Pilot exit status: 0
[2026-01-14 03:41:23] 2026-01-14 02:41:19,237 [wrapper] pandaids: 6969263977
[2026-01-14 03:41:23] 2026-01-14 02:41:20,259 [wrapper] cleanup supervisor_pilot 30098 4925
[2026-01-14 03:41:23] 2026-01-14 02:41:20,342 [wrapper] Test setup, not cleaning
[2026-01-14 03:41:23] 2026-01-14 02:41:20,419 [wrapper] apfmon messages muted
[2026-01-14 03:41:23] 2026-01-14 02:41:20,495 [wrapper] ==== wrapper stdout END ====
[2026-01-14 03:41:23] 2026-01-14 02:41:20,618 [wrapper] ==== wrapper stderr END ====
[2026-01-14 03:41:23]  *** Error codes and diagnostics ***
[2026-01-14 03:41:23]     "exeErrorCode": 0,
[2026-01-14 03:41:23]     "exeErrorDiag": "",
[2026-01-14 03:41:23]     "pilotErrorCode": 0,
[2026-01-14 03:41:23]     "pilotErrorDiag": "",
[2026-01-14 03:41:23]  *** Listing of results directory ***
[2026-01-14 03:41:23] total 732784
[2026-01-14 03:41:23] -rw-r--r--. 1 boinc boinc    579449 Jan 13 22:50 pilot3.tar.gz
[2026-01-14 03:41:23] -rwx------. 1 boinc boinc     36322 Jan 13 22:58 runpilot2-wrapper.sh
[2026-01-14 03:41:23] -rw-r--r--. 1 boinc boinc      5112 Jan 13 23:04 queuedata.json
[2026-01-14 03:41:23] -rw-r--r--. 1 boinc boinc       100 Jan 14 00:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 03:41:23] -rwxr-xr-x. 1 boinc boinc      7986 Jan 14 00:46 run_atlas
[2026-01-14 03:41:23] -rw-r--r--. 1 boinc boinc       105 Jan 14 00:46 job.xml
[2026-01-14 03:41:23] -rw-r--r--. 1 boinc boinc      6391 Jan 14 00:46 init_data.xml
[2026-01-14 03:41:23] -rw-r--r--. 2 boinc boinc 596364338 Jan 14 00:46 EVNT.32794306._000163.pool.root.1
[2026-01-14 03:41:23] -rw-r--r--. 2 boinc boinc     15847 Jan 14 00:46 start_atlas.sh
[2026-01-14 03:41:23] drwxrwx--x. 2 boinc boinc        68 Jan 14 00:46 shared
[2026-01-14 03:41:23] -rw-r--r--. 2 boinc boinc    592393 Jan 14 00:46 input.tar.gz
[2026-01-14 03:41:23] -rw-r--r--. 1 boinc boinc         0 Jan 14 00:46 boinc_lockfile
[2026-01-14 03:41:23] -rw-r--r--. 1 boinc boinc      2505 Jan 14 00:46 pandaJob.out
[2026-01-14 03:41:23] -rw-------. 1 boinc boinc    997218 Jan 14 00:50 agis_schedconf.cvmfs.json
[2026-01-14 03:41:23] -rw-------. 1 boinc boinc   1516246 Jan 14 00:50 agis_ddmendpoints.agis.ALL.json
[2026-01-14 03:41:23] drwx------. 5 boinc boinc      4096 Jan 14 00:50 pilot3
[2026-01-14 03:41:23] -rw-------. 1 boinc boinc 146578695 Jan 14 03:37 HITS.48215263._004058.pool.root.1
[2026-01-14 03:41:23] -rw-r--r--. 1 boinc boinc       532 Jan 14 03:37 boinc_task_state.xml
[2026-01-14 03:41:23] -rw-------. 1 boinc boinc      1009 Jan 14 03:38 memory_monitor_summary.json
[2026-01-14 03:41:23] -rw-------. 1 boinc boinc    390332 Jan 14 03:38 log.48215263._004058.job.log.tgz.1
[2026-01-14 03:41:23] -rw-------. 1 boinc boinc      7768 Jan 14 03:40 heartbeat.json
[2026-01-14 03:41:23] -rw-------. 1 boinc boinc        95 Jan 14 03:41 pilot_heartbeat.json
[2026-01-14 03:41:23] -rw-------. 1 boinc boinc      4883 Jan 14 03:41 pilotlog.txt
[2026-01-14 03:41:23] -rw-------. 1 boinc boinc   1369422 Jan 14 03:41 log.48215263._004058.job.log.1
[2026-01-14 03:41:23] -rw-------. 1 boinc boinc       357 Jan 14 03:41 output.list
[2026-01-14 03:41:23] -rw-r--r--. 1 boinc boinc       620 Jan 14 03:41 runtime_log
[2026-01-14 03:41:23] -rw-------. 1 boinc boinc   1781760 Jan 14 03:41 result.tar.gz
[2026-01-14 03:41:23] -rw-r--r--. 1 boinc boinc      8192 Jan 14 03:41 boinc_mmap_file
[2026-01-14 03:41:23] -rw-------. 1 boinc boinc       656 Jan 14 03:41 tLkNDm2Z1z8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmkXiKDmrr8Xkn.diag
[2026-01-14 03:41:23] -rw-r--r--. 1 boinc boinc      8817 Jan 14 03:41 runtime_log.err
[2026-01-14 03:41:23] -rw-r--r--. 1 boinc boinc        28 Jan 14 03:41 wrapper_checkpoint.txt
[2026-01-14 03:41:23] -rw-r--r--. 1 boinc boinc     20752 Jan 14 03:41 stderr.txt
[2026-01-14 03:41:23] HITS file was successfully produced:
[2026-01-14 03:41:23] -rw-------. 1 boinc boinc 146578695 Jan 14 03:37 shared/HITS.pool.root.1
[2026-01-14 03:41:23]  *** Contents of shared directory: ***
[2026-01-14 03:41:23] total 727868
[2026-01-14 03:41:23] -rw-r--r--. 2 boinc boinc 596364338 Jan 14 00:46 ATLAS.root_0
[2026-01-14 03:41:23] -rw-r--r--. 2 boinc boinc     15847 Jan 14 00:46 start_atlas.sh
[2026-01-14 03:41:23] -rw-r--r--. 2 boinc boinc    592393 Jan 14 00:46 input.tar.gz
[2026-01-14 03:41:23] -rw-------. 1 boinc boinc 146578695 Jan 14 03:37 HITS.pool.root.1
[2026-01-14 03:41:23] -rw-------. 1 boinc boinc   1781760 Jan 14 03:41 result.tar.gz
03:41:24 (811): run_atlas exited; CPU time 34724.817921
03:41:24 (811): called boinc_finish(0)

</stderr_txt>
]]>

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