Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:10:52 (2751267): wrapper (7.7.26015): starting
19:10:52 (2751267): wrapper: running run_atlas (--nthreads 11)
[2026-01-13 19:10:52] Arguments: --nthreads 11
[2026-01-13 19:10:52] Threads: 11
[2026-01-13 19:10:52] Checking for CVMFS
[2026-01-13 19:10:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-13 19:10:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-13 19:10:53] Running cvmfs_config stat atlas.cern.ch
[2026-01-13 19:10:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-13 19:10:54] 2.13.3.0 9724 30004 245364 155111 2 138 30989049 40960001 11285 16776704 0 22427661 99.601 20121011 37150 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-13 19:10:54] CVMFS is ok
[2026-01-13 19:10:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 19:10:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 19:10:54] Further information can be found at the LHC@home message board.
[2026-01-13 19:10:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 19:10:54] Checking for apptainer binary...
[2026-01-13 19:10:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-13 19:10:54] Running /usr/bin/apptainer --version
[2026-01-13 19:10:54] apptainer version 1.4.5-2.el9
[2026-01-13 19:10:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 19:10:54] c-210-33-3.aglt2.org
[2026-01-13 19:10:54] apptainer works
[2026-01-13 19:10:54] Set ATHENA_PROC_NUMBER=11
[2026-01-13 19:10:54] Set ATHENA_CORE_NUMBER=11
[2026-01-13 19:10:54] Starting ATLAS job with PandaID=6969262952
[2026-01-13 19:10:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 20:32:41]  *** The last 200 lines of the pilot log: ***
[2026-01-13 20:32:42] 2026-01-14 01:31:24,405 | INFO     | PID=2755290 has CPU usage=9.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 20:32:42] 2026-01-14 01:31:24,406 | INFO     | .. there are 10 such processes running
[2026-01-13 20:32:42] 2026-01-14 01:31:24,517 | INFO     | monitor loop #344: job 0:6969262952 is in state 'finished'
[2026-01-13 20:32:42] 2026-01-14 01:31:24,518 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 20:32:42] 2026-01-14 01:31:25,408 | INFO     | time since job start (4798s) is within the limit (349056.0s)
[2026-01-13 20:32:42] 2026-01-14 01:31:27,026 | INFO     | monitor loop #345: job 0:6969262952 is in state 'finished'
[2026-01-13 20:32:42] 2026-01-14 01:31:27,027 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 20:32:42] 2026-01-14 01:31:27,425 | INFO     | time since job start (4800s) is within the limit (349056.0s)
[2026-01-13 20:32:42] 2026-01-14 01:31:29,448 | INFO     | time since job start (4802s) is within the limit (349056.0s)
[2026-01-13 20:32:42] 2026-01-14 01:31:29,546 | INFO     | monitor loop #346: job 0:6969262952 is in state 'finished'
[2026-01-13 20:32:42] 2026-01-14 01:31:29,547 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 20:32:42] 2026-01-14 01:31:31,455 | INFO     | time since job start (4804s) is within the limit (349056.0s)
[2026-01-13 20:32:42] 2026-01-14 01:31:32,067 | INFO     | monitor loop #347: job 0:6969262952 is in state 'finished'
[2026-01-13 20:32:42] 2026-01-14 01:31:32,068 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 20:32:42] 2026-01-14 01:31:33,462 | INFO     | time since job start (4806s) is within the limit (349056.0s)
[2026-01-13 20:32:42] 2026-01-14 01:31:34,583 | INFO     | monitor loop #348: job 0:6969262952 is in state 'finished'
[2026-01-13 20:32:42] 2026-01-14 01:31:34,584 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 20:32:42] 2026-01-14 01:31:35,468 | INFO     | time since job start (4808s) is within the limit (349056.0s)
[2026-01-13 20:32:42] 2026-01-14 01:31:37,096 | INFO     | monitor loop #349: job 0:6969262952 is in state 'finished'
[2026-01-13 20:32:42] 2026-01-14 01:31:37,097 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 20:32:42] 2026-01-14 01:31:37,476 | INFO     | time since job start (4810s) is within the limit (349056.0s)
[2026-01-13 20:32:42] 2026-01-14 01:31:39,483 | INFO     | time since job start (4812s) is within the limit (349056.0s)
[2026-01-13 20:32:42] 2026-01-14 01:31:39,626 | INFO     | monitor loop #350: job 0:6969262952 is in state 'finished'
[2026-01-13 20:32:42] 2026-01-14 01:31:39,626 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 20:32:42] 2026-01-14 01:31:41,489 | INFO     | time since job start (4814s) is within the limit (349056.0s)
[2026-01-13 20:32:42] 2026-01-14 01:31:42,134 | INFO     | monitor loop #351: job 0:6969262952 is in state 'finished'
[2026-01-13 20:32:42] 2026-01-14 01:31:42,135 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 20:32:42] 2026-01-14 01:31:43,496 | INFO     | time since job start (4816s) is within the limit (349056.0s)
[2026-01-13 20:32:42] 2026-01-14 01:31:44,646 | INFO     | monitor loop #352: job 0:6969262952 is in state 'finished'
[2026-01-13 20:32:42] 2026-01-14 01:31:44,647 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 20:32:42] 2026-01-14 01:31:45,514 | INFO     | time since job start (4818s) is within the limit (349056.0s)
[2026-01-13 20:32:42] 2026-01-14 01:31:47,159 | INFO     | monitor loop #353: job 0:6969262952 is in state 'finished'
[2026-01-13 20:32:42] 2026-01-14 01:31:47,160 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 20:32:42] 2026-01-14 01:31:47,162 | INFO     | PID=2755290 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 20:32:42] 2026-01-14 01:31:47,162 | INFO     | .. there are 10 such processes running
[2026-01-13 20:32:42] 2026-01-14 01:31:47,914 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-13 20:32:42] 2026-01-14 01:31:47,929 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2994.3656964285706
[2026-01-13 20:32:42] 2026-01-14 01:31:47,947 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6969262952/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 20:32:42] 2026-01-14 01:31:47,948 | INFO     | extracted standard info from prmon json
[2026-01-13 20:32:42] 2026-01-14 01:31:47,948 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 20:32:42] 2026-01-14 01:31:47,948 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 20:32:42] 2026-01-14 01:31:47,952 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 20:32:42] 2026-01-14 01:31:47,952 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 20:32:42] 2026-01-14 01:31:47,953 | INFO     | fitting pss+swap vs Time
[2026-01-13 20:32:42] 2026-01-14 01:31:47,954 | INFO     | sum of square deviations: 106362569.7714285
[2026-01-13 20:32:42] 2026-01-14 01:31:47,954 | INFO     | sum of deviations: 2204972484.514285
[2026-01-13 20:32:42] 2026-01-14 01:31:47,954 | INFO     | mean x: 1768351989.6571429
[2026-01-13 20:32:42] 2026-01-14 01:31:47,954 | INFO     | mean y: 2918681.2714285715
[2026-01-13 20:32:42] 2026-01-14 01:31:47,954 | INFO     | intersect: -36656288486.337814
[2026-01-13 20:32:42] 2026-01-14 01:31:47,954 | INFO     | chi2: 0.499909800490628
[2026-01-13 20:32:42] 2026-01-14 01:31:47,955 | INFO     | current memory leak: 20.73 B/s (using 70 data points, chi2=0.50)
[2026-01-13 20:32:42] 2026-01-14 01:31:47,955 | INFO     | could have reported an average CPU frequency of 3005 MHz (6 samples)
[2026-01-13 20:32:42] 2026-01-14 01:31:47,955 | INFO     | ..............................
[2026-01-13 20:32:42] 2026-01-14 01:31:47,955 | INFO     | . Timing measurements:
[2026-01-13 20:32:42] 2026-01-14 01:31:47,955 | INFO     | . get job = 0 s
[2026-01-13 20:32:42] 2026-01-14 01:31:47,955 | INFO     | . initial setup = 5 s
[2026-01-13 20:32:42] 2026-01-14 01:31:47,955 | INFO     | . payload setup = 25 s
[2026-01-13 20:32:42] 2026-01-14 01:31:47,955 | INFO     | . stage-in = 0 s
[2026-01-13 20:32:42] 2026-01-14 01:31:47,959 | INFO     | . payload execution = 4713 s
[2026-01-13 20:32:42] 2026-01-14 01:31:47,960 | INFO     | . stage-out = 2 s
[2026-01-13 20:32:42] 2026-01-14 01:31:47,960 | INFO     | . log creation = 0 s
[2026-01-13 20:32:42] 2026-01-14 01:31:47,960 | INFO     | ..............................
[2026-01-13 20:32:42] 2026-01-14 01:31:48,163 | INFO     | time since job start (4821s) is within the limit (349056.0s)
[2026-01-13 20:32:42] 2026-01-14 01:31:48,535 | INFO     | 
[2026-01-13 20:32:42] 2026-01-14 01:31:48,536 | INFO     | job summary report
[2026-01-13 20:32:42] 2026-01-14 01:31:48,536 | INFO     | --------------------------------------------------
[2026-01-13 20:32:42] 2026-01-14 01:31:48,536 | INFO     | PanDA job id: 6969262952
[2026-01-13 20:32:42] 2026-01-14 01:31:48,536 | INFO     | task id: 48215263
[2026-01-13 20:32:42] 2026-01-14 01:31:48,536 | INFO     | errors: (none)
[2026-01-13 20:32:42] 2026-01-14 01:31:48,536 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 20:32:42] 2026-01-14 01:31:48,536 | INFO     | pilot state: finished 
[2026-01-13 20:32:42] 2026-01-14 01:31:48,536 | INFO     | transexitcode: 0
[2026-01-13 20:32:42] 2026-01-14 01:31:48,536 | INFO     | exeerrorcode: 0
[2026-01-13 20:32:42] 2026-01-14 01:31:48,536 | INFO     | exeerrordiag: 
[2026-01-13 20:32:42] 2026-01-14 01:31:48,536 | INFO     | exitcode: 0
[2026-01-13 20:32:42] 2026-01-14 01:31:48,536 | INFO     | exitmsg: OK
[2026-01-13 20:32:42] 2026-01-14 01:31:48,536 | INFO     | cpuconsumptiontime: 24778 s
[2026-01-13 20:32:42] 2026-01-14 01:31:48,536 | INFO     | nevents: 400
[2026-01-13 20:32:42] 2026-01-14 01:31:48,537 | INFO     | neventsw: 0
[2026-01-13 20:32:42] 2026-01-14 01:31:48,537 | INFO     | pid: 2762176
[2026-01-13 20:32:42] 2026-01-14 01:31:48,537 | INFO     | pgrp: 2762176
[2026-01-13 20:32:42] 2026-01-14 01:31:48,537 | INFO     | corecount: 11
[2026-01-13 20:32:42] 2026-01-14 01:31:48,537 | INFO     | event service: False
[2026-01-13 20:32:42] 2026-01-14 01:31:48,537 | INFO     | sizes: {0: 2283773, 1: 2283972, 2: 2284000, 13: 2284000, 20: 2284318, 24: 2284346, 4744: 2310602, 4747: 2319600, 4748: 2319656, 4778: 2319850}
[2026-01-13 20:32:42] 2026-01-14 01:31:48,537 | INFO     | --------------------------------------------------
[2026-01-13 20:32:42] 2026-01-14 01:31:48,537 | INFO     | 
[2026-01-13 20:32:42] 2026-01-14 01:31:48,537 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-13 20:32:42] 2026-01-14 01:31:48,648 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 20:32:42] 2026-01-14 01:31:48,648 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 20:32:42] 2026-01-14 01:31:48,648 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 20:32:42] 2026-01-14 01:31:48,648 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 20:32:42] 2026-01-14 01:31:48,648 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 20:32:42] 2026-01-14 01:31:48,649 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 20:32:42] 2026-01-14 01:31:48,649 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 20:32:42] 2026-01-14 01:31:48,649 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 20:32:42] 2026-01-14 01:31:48,649 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 20:32:42] 2026-01-14 01:31:48,649 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 20:32:42] 2026-01-14 01:31:48,649 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 20:32:42] 2026-01-14 01:31:48,649 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 20:32:42] 2026-01-14 01:31:48,649 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 20:32:42] 2026-01-14 01:31:48,649 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 20:32:42] 2026-01-14 01:31:48,649 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 20:32:42] 2026-01-14 01:31:48,649 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 20:32:42] 2026-01-14 01:31:48,649 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 20:32:42] 2026-01-14 01:31:48,649 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 20:32:42] 2026-01-14 01:31:48,649 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 20:32:42] 2026-01-14 01:31:48,650 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 20:32:42] 2026-01-14 01:31:48,650 | INFO     | job 6969262952 has completed (purged errors)
[2026-01-13 20:32:42] 2026-01-14 01:31:48,650 | INFO     | overall cleanup function is called
[2026-01-13 20:32:42] 2026-01-14 01:31:49,658 | INFO     | --- collectZombieJob: --- 10, [2762176]
[2026-01-13 20:32:42] 2026-01-14 01:31:49,659 | INFO     | zombie collector waiting for pid 2762176
[2026-01-13 20:32:42] 2026-01-14 01:31:49,659 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 20:32:42] 2026-01-14 01:31:49,659 | INFO     | collected zombie processes
[2026-01-13 20:32:42] 2026-01-14 01:31:49,659 | INFO     | will attempt to kill all subprocesses of pid=2762176
[2026-01-13 20:32:42] 2026-01-14 01:31:50,509 | INFO     | process IDs to be killed: [2762176] (in reverse order)
[2026-01-13 20:32:42] 2026-01-14 01:31:51,194 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 20:32:42] 2026-01-14 01:31:51,195 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 20:32:42] 2026-01-14 01:31:51,265 | INFO     | did not find any defunct processes belonging to 2762176
[2026-01-13 20:32:42] 2026-01-14 01:31:51,373 | INFO     | did not find any defunct processes belonging to 2762176
[2026-01-13 20:32:42] 2026-01-14 01:31:51,374 | INFO     | ready for new job
[2026-01-13 20:32:42] 2026-01-14 01:31:51,374 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 20:32:42] 2026-01-14 01:31:51,375 | INFO     | ***************************************
[2026-01-13 20:32:42] 2026-01-14 01:31:51,376 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 20:32:42] 2026-01-14 01:31:51,376 | INFO     | ***************************************
[2026-01-13 20:32:42] 2026-01-14 01:31:51,376 | INFO     | 
[2026-01-13 20:32:42] 2026-01-14 01:31:51,411 | INFO     | architecture information:
[2026-01-13 20:32:42] 2026-01-14 01:31:51,435 | INFO     | executing command: cat /etc/os-release
[2026-01-13 20:32:42] 2026-01-14 01:31:51,494 | INFO     | cat /etc/os-release:
[2026-01-13 20:32:42] NAME="CentOS Linux"
[2026-01-13 20:32:42] VERSION="7 (Core)"
[2026-01-13 20:32:42] ID="centos"
[2026-01-13 20:32:42] ID_LIKE="rhel fedora"
[2026-01-13 20:32:42] VERSION_ID="7"
[2026-01-13 20:32:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 20:32:42] ANSI_COLOR="0;31"
[2026-01-13 20:32:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 20:32:42] HOME_URL="https://www.centos.org/"
[2026-01-13 20:32:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 20:32:42] 
[2026-01-13 20:32:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 20:32:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 20:32:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 20:32:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 20:32:42] 
[2026-01-13 20:32:42] 2026-01-14 01:31:51,494 | INFO     | ***************************************
[2026-01-13 20:32:42] 2026-01-14 01:31:51,998 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-13 20:32:42] 2026-01-14 01:31:52,066 | INFO     | sufficient remaining disk space (71069335552 B)
[2026-01-13 20:32:42] 2026-01-14 01:31:52,067 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 20:32:42] 2026-01-14 01:31:52,067 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 20:32:42] 2026-01-14 01:31:52,067 | INFO     | update_server=False
[2026-01-13 20:32:42] 2026-01-14 01:31:52,067 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 20:32:42] 2026-01-14 01:31:52,179 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-13 20:32:42] 2026-01-14 01:31:52,180 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-13 20:32:42] 2026-01-14 01:31:52,180 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 20:32:42] 2026-01-14 01:31:52,180 | INFO     | will abort loop
[2026-01-13 20:32:42] 2026-01-14 01:31:52,284 | INFO     | all payload control threads have been joined
[2026-01-13 20:32:42] 2026-01-14 01:31:52,428 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 20:32:42] 2026-01-14 01:31:52,588 | INFO     | all job control threads have been joined
[2026-01-13 20:32:42] 2026-01-14 01:31:53,072 | INFO     | [job] retrieve thread has finished
[2026-01-13 20:32:42] 2026-01-14 01:31:53,091 | INFO     | all data control threads have been joined
[2026-01-13 20:32:42] 2026-01-14 01:31:53,186 | INFO     | [job] job monitor thread has finished
[2026-01-13 20:32:42] 2026-01-14 01:31:53,245 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 20:32:42] 2026-01-14 01:31:53,247 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 20:32:42] 2026-01-14 01:31:53,291 | INFO     | [payload] control thread has finished
[2026-01-13 20:32:42] 2026-01-14 01:31:53,598 | INFO     | [payload] failed_post thread has finished
[2026-01-13 20:32:42] 2026-01-14 01:31:53,607 | INFO     | [job] control thread has finished
[2026-01-13 20:32:42] 2026-01-14 01:31:53,780 | INFO     | [job] validate thread has finished
[2026-01-13 20:32:42] 2026-01-14 01:31:53,940 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 20:32:42] 2026-01-14 01:31:53,982 | INFO     | [payload] validate_post thread has finished
[2026-01-13 20:32:42] 2026-01-14 01:31:54,047 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 20:32:42] 2026-01-14 01:31:54,048 | INFO     | [data] copytool_in thread has finished
[2026-01-13 20:32:42] 2026-01-14 01:31:54,099 | INFO     | [data] control thread has finished
[2026-01-13 20:32:42] 2026-01-14 01:31:54,201 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 20:32:42] 2026-01-14 01:31:54,252 | INFO     | [job] queue monitor thread has finished
[2026-01-13 20:32:42] 2026-01-14 01:31:54,435 | INFO     | [data] copytool_out thread has finished
[2026-01-13 20:32:42] 2026-01-14 01:31:55,350 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 20:32:42] 2026-01-14 01:31:59,367 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 20:32:42] 2026-01-14 01:32:22,928 | INFO     | PID=2755290 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 20:32:42] 2026-01-14 01:32:22,928 | INFO     | .. there are 10 such processes running
[2026-01-13 20:32:42] 2026-01-14 01:32:22,961 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 20:32:42] 2026-01-14 01:32:22,961 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 20:32:42] 2026-01-14 01:32:22,961 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 20:32:42] 2026-01-14 01:32:34,984 | INFO     | [monitor] cgroup control has ended
[2026-01-13 20:32:42] 2026-01-14 01:32:35,567 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140004307339072)>', '<ExcThread(monitor, started 140003954898688)>']
[2026-01-13 20:32:42] 2026-01-14 01:32:36,054 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 20:32:42] 2026-01-14 01:32:36,055 | INFO     | [monitor] control thread has ended
[2026-01-13 20:32:42] 2026-01-14 01:32:40,593 | INFO     | all workflow threads have been joined
[2026-01-13 20:32:42] 2026-01-14 01:32:40,594 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 20:32:42] 2026-01-14 01:32:40,594 | INFO     | traces error code: 0
[2026-01-13 20:32:42] 2026-01-14 01:32:40,594 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 20:32:42] 2026-01-14 01:32:41,407 [wrapper] ==== pilot stdout END ====
[2026-01-13 20:32:42] 2026-01-14 01:32:41,410 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 20:32:42] 2026-01-14 01:32:41,412 [wrapper] pilotpid: 2755290
[2026-01-13 20:32:42] 2026-01-14 01:32:41,414 [wrapper] Pilot exit status: 0
[2026-01-13 20:32:42] 2026-01-14 01:32:41,466 [wrapper] pandaids: 6969262952
[2026-01-13 20:32:42] 2026-01-14 01:32:41,852 [wrapper] cleanup supervisor_pilot 2910185 2755291
[2026-01-13 20:32:42] 2026-01-14 01:32:41,859 [wrapper] Test setup, not cleaning
[2026-01-13 20:32:42] 2026-01-14 01:32:41,862 [wrapper] apfmon messages muted
[2026-01-13 20:32:42] 2026-01-14 01:32:41,865 [wrapper] ==== wrapper stdout END ====
[2026-01-13 20:32:42] 2026-01-14 01:32:41,867 [wrapper] ==== wrapper stderr END ====
[2026-01-13 20:32:42]  *** Error codes and diagnostics ***
[2026-01-13 20:32:42]     "exeErrorCode": 0,
[2026-01-13 20:32:42]     "exeErrorDiag": "",
[2026-01-13 20:32:42]     "pilotErrorCode": 0,
[2026-01-13 20:32:42]     "pilotErrorDiag": "",
[2026-01-13 20:32:42]  *** Listing of results directory ***
[2026-01-13 20:32:42] total 734532
[2026-01-13 20:32:42] -rw-r--r--. 1 boincer umatlas    579449 Jan 13 16:50 pilot3.tar.gz
[2026-01-13 20:32:42] -rwx------. 1 boincer umatlas     36322 Jan 13 16:56 runpilot2-wrapper.sh
[2026-01-13 20:32:42] -rw-r--r--. 1 boincer umatlas      5112 Jan 13 17:04 queuedata.json
[2026-01-13 20:32:42] -rw-r--r--. 1 boincer umatlas       100 Jan 13 19:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 20:32:42] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 13 19:10 run_atlas
[2026-01-13 20:32:42] -rw-r--r--. 1 boincer umatlas       105 Jan 13 19:10 job.xml
[2026-01-13 20:32:42] -rw-r--r--. 2 boincer umatlas 594308852 Jan 13 19:10 EVNT.32794306._000142.pool.root.1
[2026-01-13 20:32:42] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 19:10 start_atlas.sh
[2026-01-13 20:32:42] drwxrwx--x. 2 boincer umatlas      4096 Jan 13 19:10 shared
[2026-01-13 20:32:42] -rw-r--r--. 2 boincer umatlas    592388 Jan 13 19:10 input.tar.gz
[2026-01-13 20:32:42] -rw-r--r--. 1 boincer umatlas         0 Jan 13 19:10 boinc_lockfile
[2026-01-13 20:32:42] -rw-r--r--. 1 boincer umatlas      2504 Jan 13 19:10 pandaJob.out
[2026-01-13 20:32:42] -rw-------. 1 boincer umatlas        57 Jan 13 19:10 setup.sh.local
[2026-01-13 20:32:42] -rw-------. 1 boincer umatlas    997218 Jan 13 19:11 agis_schedconf.cvmfs.json
[2026-01-13 20:32:42] -rw-------. 1 boincer umatlas   1516246 Jan 13 19:11 agis_ddmendpoints.agis.ALL.json
[2026-01-13 20:32:42] drwx------. 5 boincer umatlas      4096 Jan 13 19:11 pilot3
[2026-01-13 20:32:42] -rw-r--r--. 1 boincer umatlas      6839 Jan 13 20:29 init_data.xml
[2026-01-13 20:32:42] -rw-------. 1 boincer umatlas 151809057 Jan 13 20:30 HITS.48215263._003536.pool.root.1
[2026-01-13 20:32:42] -rw-r--r--. 1 boincer umatlas       531 Jan 13 20:30 boinc_task_state.xml
[2026-01-13 20:32:42] -rw-------. 1 boincer umatlas      1040 Jan 13 20:31 memory_monitor_summary.json
[2026-01-13 20:32:42] -rw-------. 1 boincer umatlas    370579 Jan 13 20:31 log.48215263._003536.job.log.tgz.1
[2026-01-13 20:32:42] -rw-------. 1 boincer umatlas        95 Jan 13 20:31 pilot_heartbeat.json
[2026-01-13 20:32:42] -rw-------. 1 boincer umatlas      7822 Jan 13 20:31 heartbeat.json
[2026-01-13 20:32:42] -rw-r--r--. 1 boincer umatlas      8192 Jan 13 20:32 boinc_mmap_file
[2026-01-13 20:32:42] -rw-r--r--. 1 boincer umatlas        27 Jan 13 20:32 wrapper_checkpoint.txt
[2026-01-13 20:32:42] -rw-------. 1 boincer umatlas      5010 Jan 13 20:32 pilotlog.txt
[2026-01-13 20:32:42] -rw-------. 1 boincer umatlas    688618 Jan 13 20:32 log.48215263._003536.job.log.1
[2026-01-13 20:32:42] -rw-------. 1 boincer umatlas       357 Jan 13 20:32 output.list
[2026-01-13 20:32:42] -rw-r--r--. 1 boincer umatlas       620 Jan 13 20:32 runtime_log
[2026-01-13 20:32:42] -rw-------. 1 boincer umatlas   1075200 Jan 13 20:32 result.tar.gz
[2026-01-13 20:32:42] -rw-r--r--. 1 boincer umatlas      9354 Jan 13 20:32 runtime_log.err
[2026-01-13 20:32:42] -rw-------. 1 boincer umatlas       656 Jan 13 20:32 9NjNDmtY1z8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm3WiKDmS9pOlm.diag
[2026-01-13 20:32:42] -rw-r--r--. 1 boincer umatlas     22477 Jan 13 20:32 stderr.txt
[2026-01-13 20:32:42] HITS file was successfully produced:
[2026-01-13 20:32:42] -rw-------. 1 boincer umatlas 151809057 Jan 13 20:30 shared/HITS.pool.root.1
[2026-01-13 20:32:42]  *** Contents of shared directory: ***
[2026-01-13 20:32:42] total 730288
[2026-01-13 20:32:42] -rw-r--r--. 2 boincer umatlas 594308852 Jan 13 19:10 ATLAS.root_0
[2026-01-13 20:32:42] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 19:10 start_atlas.sh
[2026-01-13 20:32:42] -rw-r--r--. 2 boincer umatlas    592388 Jan 13 19:10 input.tar.gz
[2026-01-13 20:32:42] -rw-------. 1 boincer umatlas 151809057 Jan 13 20:30 HITS.pool.root.1
[2026-01-13 20:32:42] -rw-------. 1 boincer umatlas   1075200 Jan 13 20:32 result.tar.gz
20:32:44 (2751267): run_atlas exited; CPU time 24869.586396
20:32:44 (2751267): called boinc_finish(0)

</stderr_txt>
]]>

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