Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:18:01 (3323921): wrapper (7.7.26015): starting
18:18:01 (3323921): wrapper: running run_atlas (--nthreads 11)
[2026-01-13 18:18:01] Arguments: --nthreads 11
[2026-01-13 18:18:01] Threads: 11
[2026-01-13 18:18:01] Checking for CVMFS
[2026-01-13 18:18:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-13 18:18:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-13 18:18:02] Running cvmfs_config stat atlas.cern.ch
[2026-01-13 18:18:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-13 18:18:02] 2.13.3.0 9438 99797 290456 155107 3 1097 35959333 40960000 55491 16776704 0 1263613638 99.735 897186128 48135 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-13 18:18:02] CVMFS is ok
[2026-01-13 18:18:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 18:18:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 18:18:02] Further information can be found at the LHC@home message board.
[2026-01-13 18:18:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 18:18:02] Checking for apptainer binary...
[2026-01-13 18:18:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-13 18:18:02] Running /usr/bin/apptainer --version
[2026-01-13 18:18:02] apptainer version 1.4.5-2.el9
[2026-01-13 18:18:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 18:18:02] c8-7-3.aglt2.org
[2026-01-13 18:18:02] apptainer works
[2026-01-13 18:18:02] Set ATHENA_PROC_NUMBER=11
[2026-01-13 18:18:02] Set ATHENA_CORE_NUMBER=11
[2026-01-13 18:18:02] Starting ATLAS job with PandaID=6969262430
[2026-01-13 18:18:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 19:18:31]  *** The last 200 lines of the pilot log: ***
[2026-01-13 19:18:31] 2026-01-14 00:17:29,964 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-13 19:18:31] 2026-01-14 00:17:29,964 | INFO     | summary of transferred files:
[2026-01-13 19:18:31] 2026-01-14 00:17:29,964 | INFO     |  -- lfn=log.48215263._003114.job.log.tgz.1, status_code=0, status=transferred
[2026-01-13 19:18:31] 2026-01-14 00:17:29,964 | INFO     | stage-out finished correctly
[2026-01-13 19:18:31] 2026-01-14 00:17:30,021 | INFO     | time since job start (3550s) is within the limit (349056.0s)
[2026-01-13 19:18:31] 2026-01-14 00:17:31,426 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-13 19:18:31] 2026-01-14 00:17:31,569 | INFO     | job 6969262430 has state=finished
[2026-01-13 19:18:31] 2026-01-14 00:17:31,571 | INFO     | preparing for final server update for job 6969262430 in state='finished'
[2026-01-13 19:18:31] 2026-01-14 00:17:31,571 | INFO     | this job has now completed (state=finished)
[2026-01-13 19:18:31] 2026-01-14 00:17:31,572 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-13 19:18:31] 2026-01-14 00:17:31,572 | INFO     | log transfer has been attempted: DONE
[2026-01-13 19:18:31] 2026-01-14 00:17:31,572 | INFO     | job 6969262430 has finished - writing final server update
[2026-01-13 19:18:31] 2026-01-14 00:17:31,572 | INFO     | total number of processed events: 400 (read)
[2026-01-13 19:18:31] 2026-01-14 00:17:31,589 | INFO     | executing command: lscpu
[2026-01-13 19:18:31] 2026-01-14 00:17:31,685 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-13 19:18:31] 2026-01-14 00:17:32,028 | INFO     | time since job start (3552s) is within the limit (349056.0s)
[2026-01-13 19:18:31] 2026-01-14 00:17:32,028 | INFO     | 3554s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-13 19:18:31] 2026-01-14 00:17:32,082 | INFO     | monitor loop #213: job 0:6969262430 is in state 'finished'
[2026-01-13 19:18:31] 2026-01-14 00:17:32,082 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 19:18:31] 2026-01-14 00:17:34,035 | INFO     | time since job start (3554s) is within the limit (349056.0s)
[2026-01-13 19:18:31] 2026-01-14 00:17:34,587 | INFO     | monitor loop #214: job 0:6969262430 is in state 'finished'
[2026-01-13 19:18:31] 2026-01-14 00:17:34,587 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 19:18:31] 2026-01-14 00:17:36,132 | INFO     | PID=3337651 has CPU usage=15.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-13 19:18:31] 2026-01-14 00:17:36,132 | INFO     | .. there are 61 such processes running
[2026-01-13 19:18:31] 2026-01-14 00:17:37,092 | INFO     | monitor loop #215: job 0:6969262430 is in state 'finished'
[2026-01-13 19:18:31] 2026-01-14 00:17:37,092 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 19:18:31] 2026-01-14 00:17:37,137 | INFO     | time since job start (3557s) is within the limit (349056.0s)
[2026-01-13 19:18:31] 2026-01-14 00:17:39,143 | INFO     | time since job start (3559s) is within the limit (349056.0s)
[2026-01-13 19:18:31] 2026-01-14 00:17:39,597 | INFO     | monitor loop #216: job 0:6969262430 is in state 'finished'
[2026-01-13 19:18:31] 2026-01-14 00:17:39,597 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 19:18:31] 2026-01-14 00:17:41,153 | INFO     | time since job start (3561s) is within the limit (349056.0s)
[2026-01-13 19:18:31] 2026-01-14 00:17:42,102 | INFO     | monitor loop #217: job 0:6969262430 is in state 'finished'
[2026-01-13 19:18:31] 2026-01-14 00:17:42,102 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 19:18:31] 2026-01-14 00:17:43,160 | INFO     | time since job start (3563s) is within the limit (349056.0s)
[2026-01-13 19:18:31] 2026-01-14 00:17:43,807 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-13 19:18:31] 2026-01-14 00:17:43,813 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.1324921875
[2026-01-13 19:18:31] 2026-01-14 00:17:43,831 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6969262430/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 19:18:31] 2026-01-14 00:17:43,831 | INFO     | extracted standard info from prmon json
[2026-01-13 19:18:31] 2026-01-14 00:17:43,831 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 19:18:31] 2026-01-14 00:17:43,831 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 19:18:31] 2026-01-14 00:17:43,831 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 19:18:31] 2026-01-14 00:17:43,831 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 19:18:31] 2026-01-14 00:17:43,832 | INFO     | fitting pss+swap vs Time
[2026-01-13 19:18:31] 2026-01-14 00:17:43,832 | INFO     | sum of square deviations: 41114610.98039215
[2026-01-13 19:18:31] 2026-01-14 00:17:43,832 | INFO     | sum of deviations: 205148432.43137258
[2026-01-13 19:18:31] 2026-01-14 00:17:43,832 | INFO     | mean x: 1768348169.0196078
[2026-01-13 19:18:31] 2026-01-14 00:17:43,832 | INFO     | mean y: 2677346.568627451
[2026-01-13 19:18:31] 2026-01-14 00:17:43,833 | INFO     | intersect: -8820800395.693602
[2026-01-13 19:18:31] 2026-01-14 00:17:43,833 | INFO     | chi2: 0.0024117847237724653
[2026-01-13 19:18:31] 2026-01-14 00:17:43,833 | INFO     | current memory leak: 4.99 B/s (using 51 data points, chi2=0.00)
[2026-01-13 19:18:31] 2026-01-14 00:17:43,833 | INFO     | could have reported an average CPU frequency of 3800 MHz (5 samples)
[2026-01-13 19:18:31] 2026-01-14 00:17:43,833 | INFO     | ..............................
[2026-01-13 19:18:31] 2026-01-14 00:17:43,833 | INFO     | . Timing measurements:
[2026-01-13 19:18:31] 2026-01-14 00:17:43,833 | INFO     | . get job = 0 s
[2026-01-13 19:18:31] 2026-01-14 00:17:43,833 | INFO     | . initial setup = 2 s
[2026-01-13 19:18:31] 2026-01-14 00:17:43,833 | INFO     | . payload setup = 10 s
[2026-01-13 19:18:31] 2026-01-14 00:17:43,833 | INFO     | . stage-in = 0 s
[2026-01-13 19:18:31] 2026-01-14 00:17:43,833 | INFO     | . payload execution = 3513 s
[2026-01-13 19:18:31] 2026-01-14 00:17:43,833 | INFO     | . stage-out = 1 s
[2026-01-13 19:18:31] 2026-01-14 00:17:43,833 | INFO     | . log creation = 0 s
[2026-01-13 19:18:31] 2026-01-14 00:17:43,833 | INFO     | ..............................
[2026-01-13 19:18:31] 2026-01-14 00:17:43,912 | INFO     | 
[2026-01-13 19:18:31] 2026-01-14 00:17:43,912 | INFO     | job summary report
[2026-01-13 19:18:31] 2026-01-14 00:17:43,912 | INFO     | --------------------------------------------------
[2026-01-13 19:18:31] 2026-01-14 00:17:43,912 | INFO     | PanDA job id: 6969262430
[2026-01-13 19:18:31] 2026-01-14 00:17:43,912 | INFO     | task id: 48215263
[2026-01-13 19:18:31] 2026-01-14 00:17:43,912 | INFO     | errors: (none)
[2026-01-13 19:18:31] 2026-01-14 00:17:43,912 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 19:18:31] 2026-01-14 00:17:43,912 | INFO     | pilot state: finished 
[2026-01-13 19:18:31] 2026-01-14 00:17:43,912 | INFO     | transexitcode: 0
[2026-01-13 19:18:31] 2026-01-14 00:17:43,915 | INFO     | exeerrorcode: 0
[2026-01-13 19:18:31] 2026-01-14 00:17:43,915 | INFO     | exeerrordiag: 
[2026-01-13 19:18:31] 2026-01-14 00:17:43,915 | INFO     | exitcode: 0
[2026-01-13 19:18:31] 2026-01-14 00:17:43,915 | INFO     | exitmsg: OK
[2026-01-13 19:18:31] 2026-01-14 00:17:43,915 | INFO     | cpuconsumptiontime: 14733 s
[2026-01-13 19:18:31] 2026-01-14 00:17:43,915 | INFO     | nevents: 400
[2026-01-13 19:18:31] 2026-01-14 00:17:43,915 | INFO     | neventsw: 0
[2026-01-13 19:18:31] 2026-01-14 00:17:43,915 | INFO     | pid: 3358262
[2026-01-13 19:18:31] 2026-01-14 00:17:43,915 | INFO     | pgrp: 3358262
[2026-01-13 19:18:31] 2026-01-14 00:17:43,915 | INFO     | corecount: 11
[2026-01-13 19:18:31] 2026-01-14 00:17:43,915 | INFO     | event service: False
[2026-01-13 19:18:31] 2026-01-14 00:17:43,915 | INFO     | sizes: {0: 2283774, 1: 2283973, 9: 2284235, 11: 2284263, 3528: 2309848, 3529: 2318846, 3531: 2319030, 3543: 2319256}
[2026-01-13 19:18:31] 2026-01-14 00:17:43,915 | INFO     | --------------------------------------------------
[2026-01-13 19:18:31] 2026-01-14 00:17:43,915 | INFO     | 
[2026-01-13 19:18:31] 2026-01-14 00:17:43,915 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-13 19:18:31] 2026-01-14 00:17:43,942 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 19:18:31] 2026-01-14 00:17:43,942 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 19:18:31] 2026-01-14 00:17:43,942 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 19:18:31] 2026-01-14 00:17:43,942 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 19:18:31] 2026-01-14 00:17:43,942 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 19:18:31] 2026-01-14 00:17:43,942 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 19:18:31] 2026-01-14 00:17:43,942 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 19:18:31] 2026-01-14 00:17:43,942 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 19:18:31] 2026-01-14 00:17:43,942 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 19:18:31] 2026-01-14 00:17:43,942 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 19:18:31] 2026-01-14 00:17:43,943 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 19:18:31] 2026-01-14 00:17:43,943 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 19:18:31] 2026-01-14 00:17:43,943 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 19:18:31] 2026-01-14 00:17:43,943 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 19:18:31] 2026-01-14 00:17:43,943 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 19:18:31] 2026-01-14 00:17:43,943 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 19:18:31] 2026-01-14 00:17:43,943 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 19:18:31] 2026-01-14 00:17:43,943 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 19:18:31] 2026-01-14 00:17:43,943 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 19:18:31] 2026-01-14 00:17:43,943 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 19:18:31] 2026-01-14 00:17:43,943 | INFO     | job 6969262430 has completed (purged errors)
[2026-01-13 19:18:31] 2026-01-14 00:17:43,943 | INFO     | overall cleanup function is called
[2026-01-13 19:18:31] 2026-01-14 00:17:44,952 | INFO     | --- collectZombieJob: --- 10, [3358262]
[2026-01-13 19:18:31] 2026-01-14 00:17:44,952 | INFO     | zombie collector waiting for pid 3358262
[2026-01-13 19:18:31] 2026-01-14 00:17:44,952 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 19:18:31] 2026-01-14 00:17:44,952 | INFO     | collected zombie processes
[2026-01-13 19:18:31] 2026-01-14 00:17:44,952 | INFO     | will attempt to kill all subprocesses of pid=3358262
[2026-01-13 19:18:31] 2026-01-14 00:17:45,765 | INFO     | process IDs to be killed: [3358262] (in reverse order)
[2026-01-13 19:18:31] 2026-01-14 00:17:45,982 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 19:18:31] 2026-01-14 00:17:45,982 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 19:18:31] 2026-01-14 00:17:46,013 | INFO     | did not find any defunct processes belonging to 3358262
[2026-01-13 19:18:31] 2026-01-14 00:17:46,042 | INFO     | did not find any defunct processes belonging to 3358262
[2026-01-13 19:18:31] 2026-01-14 00:17:46,043 | INFO     | ready for new job
[2026-01-13 19:18:31] 2026-01-14 00:17:46,043 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 19:18:31] 2026-01-14 00:17:46,044 | INFO     | ***************************************
[2026-01-13 19:18:31] 2026-01-14 00:17:46,044 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 19:18:31] 2026-01-14 00:17:46,044 | INFO     | ***************************************
[2026-01-13 19:18:31] 2026-01-14 00:17:46,044 | INFO     | 
[2026-01-13 19:18:31] 2026-01-14 00:17:46,048 | INFO     | architecture information:
[2026-01-13 19:18:31] 2026-01-14 00:17:46,049 | INFO     | executing command: cat /etc/os-release
[2026-01-13 19:18:31] 2026-01-14 00:17:46,074 | INFO     | cat /etc/os-release:
[2026-01-13 19:18:31] NAME="CentOS Linux"
[2026-01-13 19:18:31] VERSION="7 (Core)"
[2026-01-13 19:18:31] ID="centos"
[2026-01-13 19:18:31] ID_LIKE="rhel fedora"
[2026-01-13 19:18:31] VERSION_ID="7"
[2026-01-13 19:18:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 19:18:31] ANSI_COLOR="0;31"
[2026-01-13 19:18:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 19:18:31] HOME_URL="https://www.centos.org/"
[2026-01-13 19:18:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 19:18:31] 
[2026-01-13 19:18:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 19:18:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 19:18:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 19:18:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 19:18:31] 
[2026-01-13 19:18:31] 2026-01-14 00:17:46,074 | INFO     | ***************************************
[2026-01-13 19:18:31] 2026-01-14 00:17:46,578 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-13 19:18:31] 2026-01-14 00:17:46,686 | INFO     | sufficient remaining disk space (164362190848 B)
[2026-01-13 19:18:31] 2026-01-14 00:17:46,686 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 19:18:31] 2026-01-14 00:17:46,687 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 19:18:31] 2026-01-14 00:17:46,687 | INFO     | update_server=False
[2026-01-13 19:18:31] 2026-01-14 00:17:46,687 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 19:18:31] 2026-01-14 00:17:46,688 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 19:18:31] 2026-01-14 00:17:46,903 | INFO     | all payload control threads have been joined
[2026-01-13 19:18:31] 2026-01-14 00:17:47,013 | INFO     | all job control threads have been joined
[2026-01-13 19:18:31] 2026-01-14 00:17:47,141 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-13 19:18:31] 2026-01-14 00:17:47,141 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-13 19:18:31] 2026-01-14 00:17:47,141 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 19:18:31] 2026-01-14 00:17:47,141 | INFO     | will abort loop
[2026-01-13 19:18:31] 2026-01-14 00:17:47,369 | INFO     | all data control threads have been joined
[2026-01-13 19:18:31] 2026-01-14 00:17:47,695 | INFO     | [job] retrieve thread has finished
[2026-01-13 19:18:31] 2026-01-14 00:17:47,874 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 19:18:31] 2026-01-14 00:17:47,909 | INFO     | [payload] control thread has finished
[2026-01-13 19:18:31] 2026-01-14 00:17:47,959 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 19:18:31] 2026-01-14 00:17:48,018 | INFO     | [job] control thread has finished
[2026-01-13 19:18:31] 2026-01-14 00:17:48,070 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 19:18:31] 2026-01-14 00:17:48,144 | INFO     | [job] validate thread has finished
[2026-01-13 19:18:31] 2026-01-14 00:17:48,147 | INFO     | [job] job monitor thread has finished
[2026-01-13 19:18:31] 2026-01-14 00:17:48,253 | INFO     | [payload] failed_post thread has finished
[2026-01-13 19:18:31] 2026-01-14 00:17:48,375 | INFO     | [data] control thread has finished
[2026-01-13 19:18:31] 2026-01-14 00:17:48,410 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 19:18:31] 2026-01-14 00:17:48,442 | INFO     | [data] copytool_in thread has finished
[2026-01-13 19:18:31] 2026-01-14 00:17:48,924 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 19:18:31] 2026-01-14 00:17:49,206 | INFO     | [payload] validate_post thread has finished
[2026-01-13 19:18:31] 2026-01-14 00:17:49,930 | INFO     | [job] queue monitor thread has finished
[2026-01-13 19:18:31] 2026-01-14 00:17:50,076 | INFO     | [data] copytool_out thread has finished
[2026-01-13 19:18:31] 2026-01-14 00:17:50,696 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 19:18:31] 2026-01-14 00:17:57,238 | INFO     | job.realtimelogging is not enabled
[2026-01-13 19:18:31] 2026-01-14 00:17:58,244 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 19:18:31] 2026-01-14 00:18:16,839 | INFO     | PID=3337651 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 19:18:31] 2026-01-14 00:18:16,840 | INFO     | .. there are 58 such processes running
[2026-01-13 19:18:31] 2026-01-14 00:18:16,840 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 19:18:31] 2026-01-14 00:18:16,840 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 19:18:31] 2026-01-14 00:18:16,840 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 19:18:31] 2026-01-14 00:18:17,026 [wrapper] supervise_pilot (15 min periods counter: 5)
[2026-01-13 19:18:31] 2026-01-14 00:18:25,925 | INFO     | [monitor] cgroup control has ended
[2026-01-13 19:18:31] 2026-01-14 00:18:26,130 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139978166495040)>', '<ExcThread(monitor, started 139976935204608)>']
[2026-01-13 19:18:31] 2026-01-14 00:18:26,894 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 19:18:31] 2026-01-14 00:18:26,894 | INFO     | [monitor] control thread has ended
[2026-01-13 19:18:31] 2026-01-14 00:18:31,158 | INFO     | all workflow threads have been joined
[2026-01-13 19:18:31] 2026-01-14 00:18:31,158 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 19:18:31] 2026-01-14 00:18:31,158 | INFO     | traces error code: 0
[2026-01-13 19:18:31] 2026-01-14 00:18:31,158 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 19:18:31] 2026-01-14 00:18:31,275 [wrapper] ==== pilot stdout END ====
[2026-01-13 19:18:31] 2026-01-14 00:18:31,280 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 19:18:31] 2026-01-14 00:18:31,284 [wrapper] pilotpid: 3337651
[2026-01-13 19:18:31] 2026-01-14 00:18:31,290 [wrapper] Pilot exit status: 0
[2026-01-13 19:18:31] 2026-01-14 00:18:31,336 [wrapper] pandaids: 6969262430
[2026-01-13 19:18:31] 2026-01-14 00:18:31,543 [wrapper] cleanup supervisor_pilot 4069116 3337652
[2026-01-13 19:18:31] 2026-01-14 00:18:31,546 [wrapper] Test setup, not cleaning
[2026-01-13 19:18:31] 2026-01-14 00:18:31,549 [wrapper] apfmon messages muted
[2026-01-13 19:18:31] 2026-01-14 00:18:31,551 [wrapper] ==== wrapper stdout END ====
[2026-01-13 19:18:31] 2026-01-14 00:18:31,552 [wrapper] ==== wrapper stderr END ====
[2026-01-13 19:18:31]  *** Error codes and diagnostics ***
[2026-01-13 19:18:31]     "exeErrorCode": 0,
[2026-01-13 19:18:31]     "exeErrorDiag": "",
[2026-01-13 19:18:31]     "pilotErrorCode": 0,
[2026-01-13 19:18:31]     "pilotErrorDiag": "",
[2026-01-13 19:18:31]  *** Listing of results directory ***
[2026-01-13 19:18:31] total 741096
[2026-01-13 19:18:31] -rw-r--r--. 1 boincer umatlas    579449 Jan 13 16:50 pilot3.tar.gz
[2026-01-13 19:18:31] -rwx------. 1 boincer umatlas     36322 Jan 13 16:55 runpilot2-wrapper.sh
[2026-01-13 19:18:31] -rw-r--r--. 1 boincer umatlas      5112 Jan 13 16:58 queuedata.json
[2026-01-13 19:18:31] -rw-r--r--. 1 boincer umatlas       100 Jan 13 18:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 19:18:31] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 13 18:18 run_atlas
[2026-01-13 19:18:31] -rw-r--r--. 1 boincer umatlas       105 Jan 13 18:18 job.xml
[2026-01-13 19:18:31] -rw-r--r--. 2 boincer umatlas 602036095 Jan 13 18:18 EVNT.32794306._000125.pool.root.1
[2026-01-13 19:18:31] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 18:18 start_atlas.sh
[2026-01-13 19:18:31] drwxrwx--x. 2 boincer umatlas      4096 Jan 13 18:18 shared
[2026-01-13 19:18:31] -rw-r--r--. 2 boincer umatlas    592392 Jan 13 18:18 input.tar.gz
[2026-01-13 19:18:31] -rw-r--r--. 1 boincer umatlas         0 Jan 13 18:18 boinc_lockfile
[2026-01-13 19:18:31] -rw-r--r--. 1 boincer umatlas      2505 Jan 13 18:18 pandaJob.out
[2026-01-13 19:18:31] -rw-------. 1 boincer umatlas        57 Jan 13 18:18 setup.sh.local
[2026-01-13 19:18:31] -rw-------. 1 boincer umatlas    997226 Jan 13 18:18 agis_schedconf.cvmfs.json
[2026-01-13 19:18:31] -rw-------. 1 boincer umatlas   1516246 Jan 13 18:18 agis_ddmendpoints.agis.ALL.json
[2026-01-13 19:18:31] drwx------. 5 boincer umatlas      4096 Jan 13 18:18 pilot3
[2026-01-13 19:18:31] -rw-r--r--. 1 boincer umatlas      7171 Jan 13 19:13 init_data.xml
[2026-01-13 19:18:31] -rw-------. 1 boincer umatlas 151249796 Jan 13 19:17 HITS.48215263._003114.pool.root.1
[2026-01-13 19:18:31] -rw-r--r--. 1 boincer umatlas       530 Jan 13 19:17 boinc_task_state.xml
[2026-01-13 19:18:31] -rw-------. 1 boincer umatlas      1035 Jan 13 19:17 memory_monitor_summary.json
[2026-01-13 19:18:31] -rw-------. 1 boincer umatlas    353795 Jan 13 19:17 log.48215263._003114.job.log.tgz.1
[2026-01-13 19:18:31] -rw-------. 1 boincer umatlas      7767 Jan 13 19:17 heartbeat.json
[2026-01-13 19:18:31] -rw-------. 1 boincer umatlas        95 Jan 13 19:18 pilot_heartbeat.json
[2026-01-13 19:18:31] -rw-------. 1 boincer umatlas      5083 Jan 13 19:18 pilotlog.txt
[2026-01-13 19:18:31] -rw-------. 1 boincer umatlas    481530 Jan 13 19:18 log.48215263._003114.job.log.1
[2026-01-13 19:18:31] -rw-r--r--. 1 boincer umatlas      8192 Jan 13 19:18 boinc_mmap_file
[2026-01-13 19:18:31] -rw-------. 1 boincer umatlas       357 Jan 13 19:18 output.list
[2026-01-13 19:18:31] -rw-r--r--. 1 boincer umatlas       620 Jan 13 19:18 runtime_log
[2026-01-13 19:18:31] -rw-------. 1 boincer umatlas    849920 Jan 13 19:18 result.tar.gz
[2026-01-13 19:18:31] -rw-r--r--. 1 boincer umatlas        27 Jan 13 19:18 wrapper_checkpoint.txt
[2026-01-13 19:18:31] -rw-r--r--. 1 boincer umatlas      9334 Jan 13 19:18 runtime_log.err
[2026-01-13 19:18:31] -rw-------. 1 boincer umatlas       650 Jan 13 19:18 EH2KDmMX1z8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm5RiKDmzriVYo.diag
[2026-01-13 19:18:31] -rw-r--r--. 1 boincer umatlas     22294 Jan 13 19:18 stderr.txt
[2026-01-13 19:18:31] HITS file was successfully produced:
[2026-01-13 19:18:31] -rw-------. 1 boincer umatlas 151249796 Jan 13 19:17 shared/HITS.pool.root.1
[2026-01-13 19:18:31]  *** Contents of shared directory: ***
[2026-01-13 19:18:31] total 737072
[2026-01-13 19:18:31] -rw-r--r--. 2 boincer umatlas 602036095 Jan 13 18:18 ATLAS.root_0
[2026-01-13 19:18:31] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 18:18 start_atlas.sh
[2026-01-13 19:18:31] -rw-r--r--. 2 boincer umatlas    592392 Jan 13 18:18 input.tar.gz
[2026-01-13 19:18:31] -rw-------. 1 boincer umatlas 151249796 Jan 13 19:17 HITS.pool.root.1
[2026-01-13 19:18:31] -rw-------. 1 boincer umatlas    849920 Jan 13 19:18 result.tar.gz
19:18:54 (3323921): run_atlas exited; CPU time 14837.744223
19:18:54 (3323921): called boinc_finish(0)

</stderr_txt>
]]>

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