Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:12:21 (354626): wrapper (7.7.26015): starting
18:12:21 (354626): wrapper: running run_atlas (--nthreads 8)
[2026-01-13 18:12:21] Arguments: --nthreads 8
[2026-01-13 18:12:21] Threads: 8
[2026-01-13 18:12:21] Checking for CVMFS
[2026-01-13 18:12:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-13 18:12:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-13 18:12:22] Running cvmfs_config stat atlas.cern.ch
[2026-01-13 18:12:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-13 18:12:23] 2.13.3.0 7219 29286 175728 155107 1 771 39629728 40960001 17162 16776704 0 46120157 99.735 29126701 37687 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-13 18:12:23] CVMFS is ok
[2026-01-13 18:12:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 18:12:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 18:12:23] Further information can be found at the LHC@home message board.
[2026-01-13 18:12:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 18:12:23] Checking for apptainer binary...
[2026-01-13 18:12:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-13 18:12:23] Running /usr/bin/apptainer --version
[2026-01-13 18:12:23] apptainer version 1.4.5-2.el9
[2026-01-13 18:12:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 18:12:24] c-212-13.aglt2.org
[2026-01-13 18:12:24] apptainer works
[2026-01-13 18:12:24] Set ATHENA_PROC_NUMBER=8
[2026-01-13 18:12:24] Set ATHENA_CORE_NUMBER=8
[2026-01-13 18:12:24] Starting ATLAS job with PandaID=6969259404
[2026-01-13 18:12:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 21:54:21]  *** The last 200 lines of the pilot log: ***
[2026-01-13 21:54:21] 2026-01-14 02:53:40,738 | INFO     | time since job start (13207s) is within the limit (349056.0s)
[2026-01-13 21:54:21] 2026-01-14 02:53:42,717 | INFO     | monitor loop #849: job 0:6969259404 is in state 'finished'
[2026-01-13 21:54:21] 2026-01-14 02:53:42,717 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 21:54:21] 2026-01-14 02:53:42,745 | INFO     | time since job start (13209s) is within the limit (349056.0s)
[2026-01-13 21:54:21] 2026-01-14 02:53:44,765 | INFO     | time since job start (13211s) is within the limit (349056.0s)
[2026-01-13 21:54:21] 2026-01-14 02:53:45,222 | INFO     | monitor loop #850: job 0:6969259404 is in state 'finished'
[2026-01-13 21:54:21] 2026-01-14 02:53:45,222 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 21:54:21] 2026-01-14 02:53:45,232 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-13 21:54:21] 2026-01-14 02:53:45,256 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3177.0252499999992
[2026-01-13 21:54:21] 2026-01-14 02:53:45,340 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6969259404/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 21:54:21] 2026-01-14 02:53:45,341 | INFO     | extracted standard info from prmon json
[2026-01-13 21:54:21] 2026-01-14 02:53:45,341 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 21:54:21] 2026-01-14 02:53:45,341 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 21:54:21] 2026-01-14 02:53:45,342 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 21:54:21] 2026-01-14 02:53:45,342 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 21:54:21] 2026-01-14 02:53:45,345 | INFO     | fitting pss+swap vs Time
[2026-01-13 21:54:21] 2026-01-14 02:53:45,354 | INFO     | sum of square deviations: 3039067950.453282
[2026-01-13 21:54:21] 2026-01-14 02:53:45,355 | INFO     | sum of deviations: 79047452287.44405
[2026-01-13 21:54:21] 2026-01-14 02:53:45,356 | INFO     | mean x: 1768352642.7056074
[2026-01-13 21:54:21] 2026-01-14 02:53:45,356 | INFO     | mean y: 2473060.546728972
[2026-01-13 21:54:21] 2026-01-14 02:53:45,356 | INFO     | intersect: -45993132641.78648
[2026-01-13 21:54:21] 2026-01-14 02:53:45,356 | INFO     | chi2: 4.636094363535607
[2026-01-13 21:54:21] 2026-01-14 02:53:45,356 | INFO     | sum of square deviations: 2830973310.956949
[2026-01-13 21:54:21] 2026-01-14 02:53:45,357 | INFO     | sum of deviations: 92185230202.94263
[2026-01-13 21:54:21] 2026-01-14 02:53:45,357 | INFO     | mean x: 1768352490.1961722
[2026-01-13 21:54:21] 2026-01-14 02:53:45,357 | INFO     | mean y: 2482478.928229665
[2026-01-13 21:54:21] 2026-01-14 02:53:45,358 | INFO     | intersect: -57580533495.7356
[2026-01-13 21:54:21] 2026-01-14 02:53:45,358 | INFO     | chi2: 3.799862228672892
[2026-01-13 21:54:21] 2026-01-14 02:53:45,358 | INFO     | current chi2=3.799862228672892 (change=18.03742696524802 %)
[2026-01-13 21:54:21] 2026-01-14 02:53:45,358 | INFO     | right removable region: 208
[2026-01-13 21:54:21] 2026-01-14 02:53:45,362 | INFO     | sum of square deviations: 2830985512.7368383
[2026-01-13 21:54:21] 2026-01-14 02:53:45,363 | INFO     | sum of deviations: 14010508289.894718
[2026-01-13 21:54:21] 2026-01-14 02:53:45,363 | INFO     | mean x: 1768352795.2105262
[2026-01-13 21:54:21] 2026-01-14 02:53:45,363 | INFO     | mean y: 2520624.3205741625
[2026-01-13 21:54:21] 2026-01-14 02:53:45,363 | INFO     | intersect: -8749032990.23819
[2026-01-13 21:54:21] 2026-01-14 02:53:45,364 | INFO     | chi2: 1.1530932887370058
[2026-01-13 21:54:21] 2026-01-14 02:53:45,364 | INFO     | current chi2=1.1530932887370058 (change=75.12791590683614 %)
[2026-01-13 21:54:21] 2026-01-14 02:53:45,364 | INFO     | sum of square deviations: 2632636813.9362817
[2026-01-13 21:54:21] 2026-01-14 02:53:45,365 | INFO     | sum of deviations: -3534240305.5931454
[2026-01-13 21:54:21] 2026-01-14 02:53:45,365 | INFO     | mean x: 1768352947.7107842
[2026-01-13 21:54:21] 2026-01-14 02:53:45,365 | INFO     | mean y: 2534080.7696078434
[2026-01-13 21:54:21] 2026-01-14 02:53:45,365 | INFO     | intersect: 2376497792.448209
[2026-01-13 21:54:21] 2026-01-14 02:53:45,366 | INFO     | chi2: 0.9214196279842617
[2026-01-13 21:54:21] 2026-01-14 02:53:45,366 | INFO     | current chi2=0.9214196279842617 (change=20.091493291622438 %)
[2026-01-13 21:54:21] 2026-01-14 02:53:45,366 | INFO     | left removable region: 20
[2026-01-13 21:54:21] 2026-01-14 02:53:45,370 | INFO     | sum of square deviations: 2060494569.3191555
[2026-01-13 21:54:21] 2026-01-14 02:53:45,371 | INFO     | sum of deviations: 4253608195.446806
[2026-01-13 21:54:21] 2026-01-14 02:53:45,371 | INFO     | mean x: 1768353069.7021277
[2026-01-13 21:54:21] 2026-01-14 02:53:45,371 | INFO     | mean y: 2551146.8829787234
[2026-01-13 21:54:21] 2026-01-14 02:53:45,371 | INFO     | intersect: -3647971024.7012563
[2026-01-13 21:54:21] 2026-01-14 02:53:45,372 | INFO     | chi2: 0.0018272721374437033
[2026-01-13 21:54:21] 2026-01-14 02:53:45,372 | INFO     | current memory leak: 2.06 B/s (using 188 data points, chi2=0.00)
[2026-01-13 21:54:21] 2026-01-14 02:53:45,372 | INFO     | could have reported an average CPU frequency of 3213 MHz (11 samples)
[2026-01-13 21:54:21] 2026-01-14 02:53:45,372 | INFO     | ..............................
[2026-01-13 21:54:21] 2026-01-14 02:53:45,372 | INFO     | . Timing measurements:
[2026-01-13 21:54:21] 2026-01-14 02:53:45,373 | INFO     | . get job = 0 s
[2026-01-13 21:54:21] 2026-01-14 02:53:45,373 | INFO     | . initial setup = 6 s
[2026-01-13 21:54:21] 2026-01-14 02:53:45,373 | INFO     | . payload setup = 46 s
[2026-01-13 21:54:21] 2026-01-14 02:53:45,373 | INFO     | . stage-in = 0 s
[2026-01-13 21:54:21] 2026-01-14 02:53:45,373 | INFO     | . payload execution = 13068 s
[2026-01-13 21:54:21] 2026-01-14 02:53:45,373 | INFO     | . stage-out = 4 s
[2026-01-13 21:54:21] 2026-01-14 02:53:45,373 | INFO     | . log creation = 0 s
[2026-01-13 21:54:21] 2026-01-14 02:53:45,373 | INFO     | ..............................
[2026-01-13 21:54:21] 2026-01-14 02:53:45,527 | INFO     | 
[2026-01-13 21:54:21] 2026-01-14 02:53:45,527 | INFO     | job summary report
[2026-01-13 21:54:21] 2026-01-14 02:53:45,527 | INFO     | --------------------------------------------------
[2026-01-13 21:54:21] 2026-01-14 02:53:45,527 | INFO     | PanDA job id: 6969259404
[2026-01-13 21:54:21] 2026-01-14 02:53:45,528 | INFO     | task id: 48215263
[2026-01-13 21:54:21] 2026-01-14 02:53:45,528 | INFO     | errors: (none)
[2026-01-13 21:54:21] 2026-01-14 02:53:45,528 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 21:54:21] 2026-01-14 02:53:45,528 | INFO     | pilot state: finished 
[2026-01-13 21:54:21] 2026-01-14 02:53:45,528 | INFO     | transexitcode: 0
[2026-01-13 21:54:21] 2026-01-14 02:53:45,528 | INFO     | exeerrorcode: 0
[2026-01-13 21:54:21] 2026-01-14 02:53:45,528 | INFO     | exeerrordiag: 
[2026-01-13 21:54:21] 2026-01-14 02:53:45,528 | INFO     | exitcode: 0
[2026-01-13 21:54:21] 2026-01-14 02:53:45,528 | INFO     | exitmsg: OK
[2026-01-13 21:54:21] 2026-01-14 02:53:45,528 | INFO     | cpuconsumptiontime: 22066 s
[2026-01-13 21:54:21] 2026-01-14 02:53:45,528 | INFO     | nevents: 400
[2026-01-13 21:54:21] 2026-01-14 02:53:45,528 | INFO     | neventsw: 0
[2026-01-13 21:54:21] 2026-01-14 02:53:45,528 | INFO     | pid: 377989
[2026-01-13 21:54:21] 2026-01-14 02:53:45,528 | INFO     | pgrp: 377989
[2026-01-13 21:54:21] 2026-01-14 02:53:45,529 | INFO     | corecount: 8
[2026-01-13 21:54:21] 2026-01-14 02:53:45,529 | INFO     | event service: False
[2026-01-13 21:54:21] 2026-01-14 02:53:45,529 | INFO     | sizes: {0: 2283940, 11: 2283940, 22: 2283968, 29: 2284258, 32: 2284286, 13118: 2314410, 13119: 2314537, 13123: 2323647, 13151: 2323785}
[2026-01-13 21:54:21] 2026-01-14 02:53:45,529 | INFO     | --------------------------------------------------
[2026-01-13 21:54:21] 2026-01-14 02:53:45,529 | INFO     | 
[2026-01-13 21:54:21] 2026-01-14 02:53:45,529 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-01-13 21:54:21] 2026-01-14 02:53:45,648 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 21:54:21] 2026-01-14 02:53:45,649 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 21:54:21] 2026-01-14 02:53:45,649 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 21:54:21] 2026-01-14 02:53:45,649 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 21:54:21] 2026-01-14 02:53:45,649 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 21:54:21] 2026-01-14 02:53:45,649 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 21:54:21] 2026-01-14 02:53:45,649 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 21:54:21] 2026-01-14 02:53:45,649 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 21:54:21] 2026-01-14 02:53:45,649 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 21:54:21] 2026-01-14 02:53:45,649 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 21:54:21] 2026-01-14 02:53:45,650 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 21:54:21] 2026-01-14 02:53:45,650 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 21:54:21] 2026-01-14 02:53:45,650 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 21:54:21] 2026-01-14 02:53:45,650 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 21:54:21] 2026-01-14 02:53:45,650 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 21:54:21] 2026-01-14 02:53:45,650 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 21:54:21] 2026-01-14 02:53:45,650 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 21:54:21] 2026-01-14 02:53:45,650 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 21:54:21] 2026-01-14 02:53:45,650 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 21:54:21] 2026-01-14 02:53:45,650 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 21:54:21] 2026-01-14 02:53:45,650 | INFO     | job 6969259404 has completed (purged errors)
[2026-01-13 21:54:21] 2026-01-14 02:53:45,651 | INFO     | overall cleanup function is called
[2026-01-13 21:54:21] 2026-01-14 02:53:46,663 | INFO     | --- collectZombieJob: --- 10, [377989]
[2026-01-13 21:54:21] 2026-01-14 02:53:46,663 | INFO     | zombie collector waiting for pid 377989
[2026-01-13 21:54:21] 2026-01-14 02:53:46,663 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 21:54:21] 2026-01-14 02:53:46,663 | INFO     | collected zombie processes
[2026-01-13 21:54:21] 2026-01-14 02:53:46,664 | INFO     | will attempt to kill all subprocesses of pid=377989
[2026-01-13 21:54:21] 2026-01-14 02:53:48,236 | INFO     | process IDs to be killed: [377989] (in reverse order)
[2026-01-13 21:54:21] 2026-01-14 02:53:49,088 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 21:54:21] 2026-01-14 02:53:49,088 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 21:54:21] 2026-01-14 02:53:49,187 | INFO     | did not find any defunct processes belonging to 377989
[2026-01-13 21:54:21] 2026-01-14 02:53:49,286 | INFO     | did not find any defunct processes belonging to 377989
[2026-01-13 21:54:21] 2026-01-14 02:53:49,286 | INFO     | ready for new job
[2026-01-13 21:54:21] 2026-01-14 02:53:49,286 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 21:54:21] 2026-01-14 02:53:49,288 | INFO     | ***************************************
[2026-01-13 21:54:21] 2026-01-14 02:53:49,289 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 21:54:21] 2026-01-14 02:53:49,289 | INFO     | ***************************************
[2026-01-13 21:54:21] 2026-01-14 02:53:49,289 | INFO     | 
[2026-01-13 21:54:21] 2026-01-14 02:53:49,335 | INFO     | architecture information:
[2026-01-13 21:54:21] 2026-01-14 02:53:49,340 | INFO     | executing command: cat /etc/os-release
[2026-01-13 21:54:21] 2026-01-14 02:53:49,482 | INFO     | cat /etc/os-release:
[2026-01-13 21:54:21] NAME="CentOS Linux"
[2026-01-13 21:54:21] VERSION="7 (Core)"
[2026-01-13 21:54:21] ID="centos"
[2026-01-13 21:54:21] ID_LIKE="rhel fedora"
[2026-01-13 21:54:21] VERSION_ID="7"
[2026-01-13 21:54:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 21:54:21] ANSI_COLOR="0;31"
[2026-01-13 21:54:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 21:54:21] HOME_URL="https://www.centos.org/"
[2026-01-13 21:54:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 21:54:21] 
[2026-01-13 21:54:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 21:54:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 21:54:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 21:54:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 21:54:21] 
[2026-01-13 21:54:21] 2026-01-14 02:53:49,482 | INFO     | ***************************************
[2026-01-13 21:54:21] 2026-01-14 02:53:49,985 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-01-13 21:54:21] 2026-01-14 02:53:50,138 | INFO     | sufficient remaining disk space (123498135552 B)
[2026-01-13 21:54:21] 2026-01-14 02:53:50,138 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 21:54:21] 2026-01-14 02:53:50,138 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 21:54:21] 2026-01-14 02:53:50,138 | INFO     | update_server=False
[2026-01-13 21:54:21] 2026-01-14 02:53:50,138 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 21:54:21] 2026-01-14 02:53:50,278 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-13 21:54:21] 2026-01-14 02:53:50,278 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-13 21:54:21] 2026-01-14 02:53:50,279 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 21:54:21] 2026-01-14 02:53:50,279 | INFO     | will abort loop
[2026-01-13 21:54:21] 2026-01-14 02:53:50,549 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 21:54:21] 2026-01-14 02:53:50,550 | INFO     | all job control threads have been joined
[2026-01-13 21:54:21] 2026-01-14 02:53:50,724 | INFO     | all data control threads have been joined
[2026-01-13 21:54:21] 2026-01-14 02:53:50,902 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 21:54:21] 2026-01-14 02:53:50,966 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 21:54:21] 2026-01-14 02:53:51,144 | INFO     | [job] retrieve thread has finished
[2026-01-13 21:54:21] 2026-01-14 02:53:51,267 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 21:54:21] 2026-01-14 02:53:51,284 | INFO     | [job] job monitor thread has finished
[2026-01-13 21:54:21] 2026-01-14 02:53:51,435 | INFO     | all payload control threads have been joined
[2026-01-13 21:54:21] 2026-01-14 02:53:51,555 | INFO     | [job] control thread has finished
[2026-01-13 21:54:21] 2026-01-14 02:53:51,556 | INFO     | [job] queue monitor thread has finished
[2026-01-13 21:54:21] 2026-01-14 02:53:51,720 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 21:54:21] 2026-01-14 02:53:51,732 | INFO     | [data] control thread has finished
[2026-01-13 21:54:21] 2026-01-14 02:53:51,750 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 21:54:21] 2026-01-14 02:53:51,883 | INFO     | [job] validate thread has finished
[2026-01-13 21:54:21] 2026-01-14 02:53:51,895 | INFO     | [payload] validate_post thread has finished
[2026-01-13 21:54:21] 2026-01-14 02:53:52,020 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 21:54:21] 2026-01-14 02:53:52,399 | INFO     | [payload] failed_post thread has finished
[2026-01-13 21:54:21] 2026-01-14 02:53:52,441 | INFO     | [payload] control thread has finished
[2026-01-13 21:54:21] 2026-01-14 02:53:52,522 | INFO     | [data] copytool_in thread has finished
[2026-01-13 21:54:21] 2026-01-14 02:53:52,911 | INFO     | [data] copytool_out thread has finished
[2026-01-13 21:54:21] 2026-01-14 02:53:54,976 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 21:54:21] 2026-01-14 02:53:55,792 | INFO     | [monitor] cgroup control has ended
[2026-01-13 21:54:21] 2026-01-14 02:53:57,313 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140215723857728)>', '<ExcThread(monitor, started 140215372998400)>']
[2026-01-13 21:54:21] 2026-01-14 02:54:02,339 | INFO     | all workflow threads have been joined
[2026-01-13 21:54:21] 2026-01-14 02:54:02,339 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 21:54:21] 2026-01-14 02:54:02,340 | INFO     | traces error code: 0
[2026-01-13 21:54:21] 2026-01-14 02:54:02,340 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 21:54:21] 2026-01-14 02:54:20,685 | INFO     | PID=369209 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-13 21:54:21] 2026-01-14 02:54:20,686 | INFO     | .. there are 17 such processes running
[2026-01-13 21:54:21] 2026-01-14 02:54:20,686 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 21:54:21] 2026-01-14 02:54:20,686 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 21:54:21] 2026-01-14 02:54:20,686 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 21:54:21] 2026-01-14 02:54:20,686 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 21:54:21] 2026-01-14 02:54:20,686 | INFO     | [monitor] control thread has ended
[2026-01-13 21:54:21] 2026-01-14 02:54:20,991 [wrapper] ==== pilot stdout END ====
[2026-01-13 21:54:21] 2026-01-14 02:54:20,993 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 21:54:21] 2026-01-14 02:54:20,996 [wrapper] pilotpid: 369209
[2026-01-13 21:54:21] 2026-01-14 02:54:20,998 [wrapper] Pilot exit status: 0
[2026-01-13 21:54:21] 2026-01-14 02:54:21,024 [wrapper] pandaids: 6969259404
[2026-01-13 21:54:21] 2026-01-14 02:54:21,170 [wrapper] cleanup supervisor_pilot  990712 369210
[2026-01-13 21:54:21] 2026-01-14 02:54:21,206 [wrapper] Test setup, not cleaning
[2026-01-13 21:54:21] 2026-01-14 02:54:21,216 [wrapper] apfmon messages muted
[2026-01-13 21:54:21] 2026-01-14 02:54:21,235 [wrapper] ==== wrapper stdout END ====
[2026-01-13 21:54:21] 2026-01-14 02:54:21,240 [wrapper] ==== wrapper stderr END ====
[2026-01-13 21:54:21]  *** Error codes and diagnostics ***
[2026-01-13 21:54:21]     "exeErrorCode": 0,
[2026-01-13 21:54:21]     "exeErrorDiag": "",
[2026-01-13 21:54:21]     "pilotErrorCode": 0,
[2026-01-13 21:54:21]     "pilotErrorDiag": "",
[2026-01-13 21:54:21]  *** Listing of results directory ***
[2026-01-13 21:54:21] total 739004
[2026-01-13 21:54:21] -rwx------. 1 boincer umatlas     36322 Jan 13 16:47 runpilot2-wrapper.sh
[2026-01-13 21:54:21] -rw-r--r--. 1 boincer umatlas    579449 Jan 13 16:50 pilot3.tar.gz
[2026-01-13 21:54:21] -rw-r--r--. 1 boincer umatlas      5112 Jan 13 16:52 queuedata.json
[2026-01-13 21:54:21] -rw-r--r--. 1 boincer umatlas       100 Jan 13 18:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 21:54:21] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 13 18:12 run_atlas
[2026-01-13 21:54:21] -rw-r--r--. 1 boincer umatlas       105 Jan 13 18:12 job.xml
[2026-01-13 21:54:21] -rw-r--r--. 2 boincer umatlas 596256432 Jan 13 18:12 EVNT.32794306._000080.pool.root.1
[2026-01-13 21:54:21] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 18:12 start_atlas.sh
[2026-01-13 21:54:21] drwxrwx--x. 2 boincer umatlas      4096 Jan 13 18:12 shared
[2026-01-13 21:54:21] -rw-r--r--. 2 boincer umatlas    592384 Jan 13 18:12 input.tar.gz
[2026-01-13 21:54:21] -rw-r--r--. 1 boincer umatlas         0 Jan 13 18:12 boinc_lockfile
[2026-01-13 21:54:21] -rw-r--r--. 1 boincer umatlas      2502 Jan 13 18:12 pandaJob.out
[2026-01-13 21:54:21] -rw-------. 1 boincer umatlas        57 Jan 13 18:12 setup.sh.local
[2026-01-13 21:54:21] -rw-------. 1 boincer umatlas    997226 Jan 13 18:13 agis_schedconf.cvmfs.json
[2026-01-13 21:54:21] drwx------. 5 boincer umatlas      4096 Jan 13 18:13 pilot3
[2026-01-13 21:54:21] -rw-r--r--. 1 boincer umatlas      6959 Jan 13 21:45 init_data.xml
[2026-01-13 21:54:21] -rw-------. 1 boincer umatlas 152274384 Jan 13 21:52 HITS.48215263._001978.pool.root.1
[2026-01-13 21:54:21] -rw-r--r--. 1 boincer umatlas       531 Jan 13 21:52 boinc_task_state.xml
[2026-01-13 21:54:21] -rw-------. 1 boincer umatlas      1030 Jan 13 21:53 memory_monitor_summary.json
[2026-01-13 21:54:21] -rw-------. 1 boincer umatlas   1516246 Jan 13 21:53 agis_ddmendpoints.agis.ALL.json
[2026-01-13 21:54:21] -rw-------. 1 boincer umatlas    429995 Jan 13 21:53 log.48215263._001978.job.log.tgz.1
[2026-01-13 21:54:21] -rw-------. 1 boincer umatlas        95 Jan 13 21:53 pilot_heartbeat.json
[2026-01-13 21:54:21] -rw-------. 1 boincer umatlas      7761 Jan 13 21:53 heartbeat.json
[2026-01-13 21:54:21] -rw-r--r--. 1 boincer umatlas      8192 Jan 13 21:54 boinc_mmap_file
[2026-01-13 21:54:21] -rw-------. 1 boincer umatlas       822 Jan 13 21:54 pilotlog.txt
[2026-01-13 21:54:21] -rw-r--r--. 1 boincer umatlas        28 Jan 13 21:54 wrapper_checkpoint.txt
[2026-01-13 21:54:21] -rw-------. 1 boincer umatlas   1714060 Jan 13 21:54 log.48215263._001978.job.log.1
[2026-01-13 21:54:21] -rw-------. 1 boincer umatlas       357 Jan 13 21:54 output.list
[2026-01-13 21:54:21] -rw-r--r--. 1 boincer umatlas       620 Jan 13 21:54 runtime_log
[2026-01-13 21:54:21] -rw-------. 1 boincer umatlas   2160640 Jan 13 21:54 result.tar.gz
[2026-01-13 21:54:21] -rw-------. 1 boincer umatlas       655 Jan 13 21:54 VbELDmzP1z8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4ZoKDmJLBXLn.diag
[2026-01-13 21:54:21] -rw-r--r--. 1 boincer umatlas      9343 Jan 13 21:54 runtime_log.err
[2026-01-13 21:54:21] -rw-r--r--. 1 boincer umatlas     21389 Jan 13 21:54 stderr.txt
[2026-01-13 21:54:21] HITS file was successfully produced:
[2026-01-13 21:54:21] -rw-------. 1 boincer umatlas 152274384 Jan 13 21:52 shared/HITS.pool.root.1
[2026-01-13 21:54:21]  *** Contents of shared directory: ***
[2026-01-13 21:54:21] total 733708
[2026-01-13 21:54:21] -rw-r--r--. 2 boincer umatlas 596256432 Jan 13 18:12 ATLAS.root_0
[2026-01-13 21:54:21] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 18:12 start_atlas.sh
[2026-01-13 21:54:21] -rw-r--r--. 2 boincer umatlas    592384 Jan 13 18:12 input.tar.gz
[2026-01-13 21:54:21] -rw-------. 1 boincer umatlas 152274384 Jan 13 21:52 HITS.pool.root.1
[2026-01-13 21:54:21] -rw-------. 1 boincer umatlas   2160640 Jan 13 21:54 result.tar.gz
21:54:23 (354626): run_atlas exited; CPU time 22470.892244
21:54:23 (354626): called boinc_finish(0)

</stderr_txt>
]]>

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