Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:03:15 (31443): wrapper (7.7.26015): starting
18:03:15 (31443): wrapper: running run_atlas (--nthreads 12)
[2026-01-13 18:03:15] Arguments: --nthreads 12
[2026-01-13 18:03:15] Threads: 12
[2026-01-13 18:03:15] Checking for CVMFS
[2026-01-13 18:03:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-13 18:03:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-13 18:03:15] Running cvmfs_config stat atlas.cern.ch
[2026-01-13 18:03:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-13 18:03:16] 2.11.2.0 30551 187378 95208 155107 2 57 11070916 20275201 1 130560 0 72915063 99.894 11131436 29292 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-13 18:03:16] CVMFS is ok
[2026-01-13 18:03:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 18:03:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 18:03:16] Further information can be found at the LHC@home message board.
[2026-01-13 18:03:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 18:03:16] Checking for apptainer binary...
[2026-01-13 18:03:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-13 18:03:16] Running /usr/bin/apptainer --version
[2026-01-13 18:03:16] apptainer version 1.3.2-1.el7
[2026-01-13 18:03:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 18:03:17] c-205-16.aglt2.org
[2026-01-13 18:03:17] apptainer works
[2026-01-13 18:03:17] Set ATHENA_PROC_NUMBER=12
[2026-01-13 18:03:17] Set ATHENA_CORE_NUMBER=12
[2026-01-13 18:03:17] Starting ATLAS job with PandaID=6969259340
[2026-01-13 18:03:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 18:52:42]  *** The last 200 lines of the pilot log: ***
[2026-01-13 18:52:42]  replicas=None
[2026-01-13 18:52:42]  scope=mc23_13p6TeV
[2026-01-13 18:52:42]  status=None
[2026-01-13 18:52:42]  status_code=0
[2026-01-13 18:52:42]  storage_token=
[2026-01-13 18:52:42]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6969259340/log.48215263._001914.job.log.tgz.1
[2026-01-13 18:52:42]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/72/08/log.48215263._001914.job.log.tgz.1
[2026-01-13 18:52:42]  workdir=None
[2026-01-13 18:52:42] ]
[2026-01-13 18:52:42] 2026-01-13 23:51:49,436 | INFO     | transferring file log.48215263._001914.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6969259340/log.48215263._001914.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-13 18:52:42] 2026-01-13 23:51:49,436 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6969259340/log.48215263._001914.job.log.tgz.1 /tmp/boinchome/slots/0/log.48215263._001914.job
[2026-01-13 18:52:42] 2026-01-13 23:51:49,459 | INFO     | adding to output.list: log.48215263._001914.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/72/08/log.48215263._001914.job.log.tg
[2026-01-13 18:52:42] 2026-01-13 23:51:49,460 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-13 18:52:42] 2026-01-13 23:51:49,460 | INFO     | summary of transferred files:
[2026-01-13 18:52:42] 2026-01-13 23:51:49,461 | INFO     |  -- lfn=log.48215263._001914.job.log.tgz.1, status_code=0, status=transferred
[2026-01-13 18:52:42] 2026-01-13 23:51:49,461 | INFO     | stage-out finished correctly
[2026-01-13 18:52:42] 2026-01-13 23:51:49,956 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-13 18:52:42] 2026-01-13 23:51:50,608 | INFO     | monitor loop #219: job 0:6969259340 is in state 'finished'
[2026-01-13 18:52:42] 2026-01-13 23:51:50,608 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 18:52:42] 2026-01-13 23:51:50,668 | INFO     | time since job start (2898s) is within the limit (349056.0s)
[2026-01-13 18:52:42] 2026-01-13 23:51:50,993 | INFO     | job 6969259340 has state=finished
[2026-01-13 18:52:42] 2026-01-13 23:51:50,994 | INFO     | preparing for final server update for job 6969259340 in state='finished'
[2026-01-13 18:52:42] 2026-01-13 23:51:50,994 | INFO     | this job has now completed (state=finished)
[2026-01-13 18:52:42] 2026-01-13 23:51:50,994 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-13 18:52:42] 2026-01-13 23:51:50,995 | INFO     | log transfer has been attempted: DONE
[2026-01-13 18:52:42] 2026-01-13 23:51:50,995 | INFO     | job 6969259340 has finished - writing final server update
[2026-01-13 18:52:42] 2026-01-13 23:51:50,995 | INFO     | total number of processed events: 400 (read)
[2026-01-13 18:52:42] 2026-01-13 23:51:50,996 | INFO     | executing command: lscpu
[2026-01-13 18:52:42] 2026-01-13 23:51:51,022 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-13 18:52:42] 2026-01-13 23:51:51,789 | INFO     | PID=2831 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-13 18:52:42] 2026-01-13 23:51:52,790 | INFO     | time since job start (2900s) is within the limit (349056.0s)
[2026-01-13 18:52:42] 2026-01-13 23:51:53,111 | INFO     | monitor loop #220: job 0:6969259340 is in state 'finished'
[2026-01-13 18:52:42] 2026-01-13 23:51:53,111 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 18:52:42] 2026-01-13 23:51:54,795 | INFO     | time since job start (2902s) is within the limit (349056.0s)
[2026-01-13 18:52:42] 2026-01-13 23:51:55,614 | INFO     | monitor loop #221: job 0:6969259340 is in state 'finished'
[2026-01-13 18:52:42] 2026-01-13 23:51:55,614 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 18:52:42] 2026-01-13 23:51:55,819 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-13 18:52:42] 2026-01-13 23:51:55,823 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2026-01-13 18:52:42] 2026-01-13 23:51:55,824 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6969259340/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 18:52:42] 2026-01-13 23:51:55,825 | INFO     | extracted standard info from prmon json
[2026-01-13 18:52:42] 2026-01-13 23:51:55,825 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 18:52:42] 2026-01-13 23:51:55,825 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 18:52:42] 2026-01-13 23:51:55,825 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 18:52:42] 2026-01-13 23:51:55,826 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 18:52:42] 2026-01-13 23:51:55,827 | INFO     | fitting pss+swap vs Time
[2026-01-13 18:52:42] 2026-01-13 23:51:55,827 | INFO     | sum of square deviations: 19832930.0
[2026-01-13 18:52:42] 2026-01-13 23:51:55,827 | INFO     | sum of deviations: -3322908876.0
[2026-01-13 18:52:42] 2026-01-13 23:51:55,827 | INFO     | mean x: 1768346935.5
[2026-01-13 18:52:42] 2026-01-13 23:51:55,827 | INFO     | mean y: 2835559.0
[2026-01-13 18:52:42] 2026-01-13 23:51:55,827 | INFO     | intersect: 296280578072.10065
[2026-01-13 18:52:42] 2026-01-13 23:51:55,828 | INFO     | chi2: 0.0313737573657643
[2026-01-13 18:52:42] 2026-01-13 23:51:55,828 | INFO     | current memory leak: -167.55 B/s (using 40 data points, chi2=0.03)
[2026-01-13 18:52:42] 2026-01-13 23:51:55,828 | INFO     | could have reported an average CPU frequency of 1902 MHz (5 samples)
[2026-01-13 18:52:42] 2026-01-13 23:51:55,828 | INFO     | ..............................
[2026-01-13 18:52:42] 2026-01-13 23:51:55,828 | INFO     | . Timing measurements:
[2026-01-13 18:52:42] 2026-01-13 23:51:55,828 | INFO     | . get job = 0 s
[2026-01-13 18:52:42] 2026-01-13 23:51:55,828 | INFO     | . initial setup = 2 s
[2026-01-13 18:52:42] 2026-01-13 23:51:55,829 | INFO     | . payload setup = 7 s
[2026-01-13 18:52:42] 2026-01-13 23:51:55,829 | INFO     | . stage-in = 0 s
[2026-01-13 18:52:42] 2026-01-13 23:51:55,829 | INFO     | . payload execution = 2868 s
[2026-01-13 18:52:42] 2026-01-13 23:51:55,829 | INFO     | . stage-out = 0 s
[2026-01-13 18:52:42] 2026-01-13 23:51:55,829 | INFO     | . log creation = 0 s
[2026-01-13 18:52:42] 2026-01-13 23:51:55,829 | INFO     | ..............................
[2026-01-13 18:52:42] 2026-01-13 23:51:56,188 | INFO     | 
[2026-01-13 18:52:42] 2026-01-13 23:51:56,188 | INFO     | job summary report
[2026-01-13 18:52:42] 2026-01-13 23:51:56,188 | INFO     | --------------------------------------------------
[2026-01-13 18:52:42] 2026-01-13 23:51:56,188 | INFO     | PanDA job id: 6969259340
[2026-01-13 18:52:42] 2026-01-13 23:51:56,189 | INFO     | task id: 48215263
[2026-01-13 18:52:42] 2026-01-13 23:51:56,189 | INFO     | errors: (none)
[2026-01-13 18:52:42] 2026-01-13 23:51:56,189 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 18:52:42] 2026-01-13 23:51:56,189 | INFO     | pilot state: finished 
[2026-01-13 18:52:42] 2026-01-13 23:51:56,189 | INFO     | transexitcode: 0
[2026-01-13 18:52:42] 2026-01-13 23:51:56,189 | INFO     | exeerrorcode: 0
[2026-01-13 18:52:42] 2026-01-13 23:51:56,189 | INFO     | exeerrordiag: 
[2026-01-13 18:52:42] 2026-01-13 23:51:56,190 | INFO     | exitcode: 0
[2026-01-13 18:52:42] 2026-01-13 23:51:56,190 | INFO     | exitmsg: OK
[2026-01-13 18:52:42] 2026-01-13 23:51:56,190 | INFO     | cpuconsumptiontime: 30230 s
[2026-01-13 18:52:42] 2026-01-13 23:51:56,190 | INFO     | nevents: 400
[2026-01-13 18:52:42] 2026-01-13 23:51:56,190 | INFO     | neventsw: 0
[2026-01-13 18:52:42] 2026-01-13 23:51:56,190 | INFO     | pid: 9299
[2026-01-13 18:52:42] 2026-01-13 23:51:56,191 | INFO     | pgrp: 9299
[2026-01-13 18:52:42] 2026-01-13 23:51:56,191 | INFO     | corecount: 12
[2026-01-13 18:52:42] 2026-01-13 23:51:56,191 | INFO     | event service: False
[2026-01-13 18:52:42] 2026-01-13 23:51:56,191 | INFO     | sizes: {0: 2283942, 1: 2283942, 5: 2284232, 11: 2284288, 2879: 2309553, 2881: 2318763, 2887: 2318933}
[2026-01-13 18:52:42] 2026-01-13 23:51:56,191 | INFO     | --------------------------------------------------
[2026-01-13 18:52:42] 2026-01-13 23:51:56,191 | INFO     | 
[2026-01-13 18:52:42] 2026-01-13 23:51:56,192 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-13 18:52:42] 2026-01-13 23:51:56,215 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 18:52:42] 2026-01-13 23:51:56,216 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 18:52:42] 2026-01-13 23:51:56,216 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 18:52:42] 2026-01-13 23:51:56,216 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 18:52:42] 2026-01-13 23:51:56,216 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 18:52:42] 2026-01-13 23:51:56,216 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 18:52:42] 2026-01-13 23:51:56,217 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 18:52:42] 2026-01-13 23:51:56,217 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 18:52:42] 2026-01-13 23:51:56,217 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 18:52:42] 2026-01-13 23:51:56,217 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 18:52:42] 2026-01-13 23:51:56,217 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 18:52:42] 2026-01-13 23:51:56,218 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 18:52:42] 2026-01-13 23:51:56,218 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 18:52:42] 2026-01-13 23:51:56,218 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 18:52:42] 2026-01-13 23:51:56,218 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 18:52:42] 2026-01-13 23:51:56,218 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 18:52:42] 2026-01-13 23:51:56,218 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 18:52:42] 2026-01-13 23:51:56,219 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 18:52:42] 2026-01-13 23:51:56,219 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 18:52:42] 2026-01-13 23:51:56,219 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 18:52:42] 2026-01-13 23:51:56,219 | INFO     | job 6969259340 has completed (purged errors)
[2026-01-13 18:52:42] 2026-01-13 23:51:56,219 | INFO     | overall cleanup function is called
[2026-01-13 18:52:42] 2026-01-13 23:51:57,228 | INFO     | --- collectZombieJob: --- 10, [9299]
[2026-01-13 18:52:42] 2026-01-13 23:51:57,228 | INFO     | zombie collector waiting for pid 9299
[2026-01-13 18:52:42] 2026-01-13 23:51:57,228 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 18:52:42] 2026-01-13 23:51:57,228 | INFO     | collected zombie processes
[2026-01-13 18:52:42] 2026-01-13 23:51:57,228 | INFO     | will attempt to kill all subprocesses of pid=9299
[2026-01-13 18:52:42] 2026-01-13 23:51:57,319 | INFO     | process IDs to be killed: [9299] (in reverse order)
[2026-01-13 18:52:42] 2026-01-13 23:51:57,371 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 18:52:42] 2026-01-13 23:51:57,372 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 18:52:42] 2026-01-13 23:51:57,374 | INFO     | did not find any defunct processes belonging to 9299
[2026-01-13 18:52:42] 2026-01-13 23:51:57,377 | INFO     | did not find any defunct processes belonging to 9299
[2026-01-13 18:52:42] 2026-01-13 23:51:57,377 | INFO     | ready for new job
[2026-01-13 18:52:42] 2026-01-13 23:51:57,414 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 18:52:42] 2026-01-13 23:51:57,423 | INFO     | ***************************************
[2026-01-13 18:52:42] 2026-01-13 23:51:57,423 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 18:52:42] 2026-01-13 23:51:57,423 | INFO     | ***************************************
[2026-01-13 18:52:42] 2026-01-13 23:51:57,424 | INFO     | 
[2026-01-13 18:52:42] 2026-01-13 23:51:57,424 | INFO     | architecture information:
[2026-01-13 18:52:42] 2026-01-13 23:51:57,425 | INFO     | executing command: cat /etc/os-release
[2026-01-13 18:52:42] 2026-01-13 23:51:57,477 | INFO     | cat /etc/os-release:
[2026-01-13 18:52:42] NAME="CentOS Linux"
[2026-01-13 18:52:42] VERSION="7 (Core)"
[2026-01-13 18:52:42] ID="centos"
[2026-01-13 18:52:42] ID_LIKE="rhel fedora"
[2026-01-13 18:52:42] VERSION_ID="7"
[2026-01-13 18:52:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 18:52:42] ANSI_COLOR="0;31"
[2026-01-13 18:52:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 18:52:42] HOME_URL="https://www.centos.org/"
[2026-01-13 18:52:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 18:52:42] 
[2026-01-13 18:52:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 18:52:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 18:52:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 18:52:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 18:52:42] 
[2026-01-13 18:52:42] 2026-01-13 23:51:57,478 | INFO     | ***************************************
[2026-01-13 18:52:42] 2026-01-13 23:51:57,981 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-13 18:52:42] 2026-01-13 23:51:57,997 | INFO     | sufficient remaining disk space (28766633984 B)
[2026-01-13 18:52:42] 2026-01-13 23:51:57,997 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 18:52:42] 2026-01-13 23:51:57,998 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 18:52:42] 2026-01-13 23:51:57,998 | INFO     | update_server=False
[2026-01-13 18:52:42] 2026-01-13 23:51:57,998 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 18:52:42] 2026-01-13 23:51:57,998 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 18:52:42] 2026-01-13 23:51:58,117 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-13 18:52:42] 2026-01-13 23:51:58,117 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-13 18:52:42] 2026-01-13 23:51:58,117 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 18:52:42] 2026-01-13 23:51:58,118 | INFO     | will abort loop
[2026-01-13 18:52:42] 2026-01-13 23:51:58,323 | INFO     | all payload control threads have been joined
[2026-01-13 18:52:42] 2026-01-13 23:51:59,004 | INFO     | [job] retrieve thread has finished
[2026-01-13 18:52:42] 2026-01-13 23:51:59,088 | INFO     | all data control threads have been joined
[2026-01-13 18:52:42] 2026-01-13 23:51:59,100 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 18:52:42] 2026-01-13 23:51:59,123 | INFO     | [job] job monitor thread has finished
[2026-01-13 18:52:42] 2026-01-13 23:51:59,126 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 18:52:42] 2026-01-13 23:51:59,328 | INFO     | [payload] control thread has finished
[2026-01-13 18:52:42] 2026-01-13 23:51:59,350 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 18:52:42] 2026-01-13 23:51:59,421 | INFO     | all job control threads have been joined
[2026-01-13 18:52:42] 2026-01-13 23:51:59,551 | INFO     | [payload] failed_post thread has finished
[2026-01-13 18:52:42] 2026-01-13 23:51:59,552 | INFO     | [data] copytool_in thread has finished
[2026-01-13 18:52:42] 2026-01-13 23:52:00,004 | INFO     | [data] copytool_out thread has finished
[2026-01-13 18:52:42] 2026-01-13 23:52:00,093 | INFO     | [data] control thread has finished
[2026-01-13 18:52:42] 2026-01-13 23:52:00,155 | INFO     | [payload] validate_post thread has finished
[2026-01-13 18:52:42] 2026-01-13 23:52:00,177 | INFO     | [job] validate thread has finished
[2026-01-13 18:52:42] 2026-01-13 23:52:00,423 | INFO     | [job] control thread has finished
[2026-01-13 18:52:42] 2026-01-13 23:52:00,543 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 18:52:42] 2026-01-13 23:52:00,919 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 18:52:42] 2026-01-13 23:52:01,924 | INFO     | [job] queue monitor thread has finished
[2026-01-13 18:52:42] 2026-01-13 23:52:04,549 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 18:52:42] 2026-01-13 23:52:08,149 | INFO     | job.realtimelogging is not enabled
[2026-01-13 18:52:42] 2026-01-13 23:52:09,155 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 18:52:42] 2026-01-13 23:52:28,001 | INFO     | PID=2831 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-13 18:52:42] 2026-01-13 23:52:28,001 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 18:52:42] 2026-01-13 23:52:28,002 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 18:52:42] 2026-01-13 23:52:28,002 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 18:52:42] 2026-01-13 23:52:36,768 | INFO     | [monitor] cgroup control has ended
[2026-01-13 18:52:42] 2026-01-13 23:52:36,848 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140541502129984)>', '<ExcThread(monitor, started 140541275141888)>']
[2026-01-13 18:52:42] 2026-01-13 23:52:37,048 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 18:52:42] 2026-01-13 23:52:37,048 | INFO     | [monitor] control thread has ended
[2026-01-13 18:52:42] 2026-01-13 23:52:41,873 | INFO     | all workflow threads have been joined
[2026-01-13 18:52:42] 2026-01-13 23:52:41,873 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 18:52:42] 2026-01-13 23:52:41,878 | INFO     | traces error code: 0
[2026-01-13 18:52:42] 2026-01-13 23:52:41,878 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 18:52:42] 2026-01-13 23:52:41,978 [wrapper] ==== pilot stdout END ====
[2026-01-13 18:52:42] 2026-01-13 23:52:41,982 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 18:52:42] 2026-01-13 23:52:41,986 [wrapper] pilotpid: 2831
[2026-01-13 18:52:42] 2026-01-13 23:52:41,990 [wrapper] Pilot exit status: 0
[2026-01-13 18:52:42] 2026-01-13 23:52:42,006 [wrapper] pandaids: 6969259340
[2026-01-13 18:52:42] 2026-01-13 23:52:42,053 [wrapper] cleanup supervisor_pilot  1496 2832
[2026-01-13 18:52:42] 2026-01-13 23:52:42,058 [wrapper] Test setup, not cleaning
[2026-01-13 18:52:42] 2026-01-13 23:52:42,061 [wrapper] apfmon messages muted
[2026-01-13 18:52:42] 2026-01-13 23:52:42,065 [wrapper] ==== wrapper stdout END ====
[2026-01-13 18:52:42] 2026-01-13 23:52:42,070 [wrapper] ==== wrapper stderr END ====
[2026-01-13 18:52:42]  *** Error codes and diagnostics ***
[2026-01-13 18:52:42]     "exeErrorCode": 0,
[2026-01-13 18:52:42]     "exeErrorDiag": "",
[2026-01-13 18:52:42]     "pilotErrorCode": 0,
[2026-01-13 18:52:42]     "pilotErrorDiag": "",
[2026-01-13 18:52:42]  *** Listing of results directory ***
[2026-01-13 18:52:42] total 740316
[2026-01-13 18:52:42] -rwx------ 1 boincer umatlas     36322 Jan 13 16:47 runpilot2-wrapper.sh
[2026-01-13 18:52:42] -rw-r--r-- 1 boincer umatlas    579449 Jan 13 16:50 pilot3.tar.gz
[2026-01-13 18:52:42] -rw-r--r-- 1 boincer umatlas      5112 Jan 13 16:52 queuedata.json
[2026-01-13 18:52:42] -rw-r--r-- 1 boincer umatlas       100 Jan 13 18:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 18:52:42] -rwxr-xr-x 1 boincer umatlas      7986 Jan 13 18:03 run_atlas
[2026-01-13 18:52:42] -rw-r--r-- 1 boincer umatlas       105 Jan 13 18:03 job.xml
[2026-01-13 18:52:42] -rw-r--r-- 2 boincer umatlas 599018743 Jan 13 18:03 EVNT.32794306._000077.pool.root.1
[2026-01-13 18:52:42] -rw-r--r-- 2 boincer umatlas     15847 Jan 13 18:03 start_atlas.sh
[2026-01-13 18:52:42] drwxrwx--x 2 boincer umatlas      4096 Jan 13 18:03 shared
[2026-01-13 18:52:42] -rw-r--r-- 2 boincer umatlas    592389 Jan 13 18:03 input.tar.gz
[2026-01-13 18:52:42] -rw-r--r-- 1 boincer umatlas         0 Jan 13 18:03 boinc_lockfile
[2026-01-13 18:52:42] -rw-r--r-- 1 boincer umatlas      2503 Jan 13 18:03 pandaJob.out
[2026-01-13 18:52:42] -rw------- 1 boincer umatlas        57 Jan 13 18:03 setup.sh.local
[2026-01-13 18:52:42] -rw------- 1 boincer umatlas    997226 Jan 13 18:03 agis_schedconf.cvmfs.json
[2026-01-13 18:52:42] -rw------- 1 boincer umatlas   1516246 Jan 13 18:03 agis_ddmendpoints.agis.ALL.json
[2026-01-13 18:52:42] drwx------ 5 boincer umatlas      4096 Jan 13 18:03 pilot3
[2026-01-13 18:52:42] -rw-r--r-- 1 boincer umatlas      5953 Jan 13 18:48 init_data.xml
[2026-01-13 18:52:42] -rw------- 1 boincer umatlas 153540974 Jan 13 18:51 HITS.48215263._001914.pool.root.1
[2026-01-13 18:52:42] -rw-r--r-- 1 boincer umatlas       530 Jan 13 18:51 boinc_task_state.xml
[2026-01-13 18:52:42] -rw------- 1 boincer umatlas      1043 Jan 13 18:51 memory_monitor_summary.json
[2026-01-13 18:52:42] -rw------- 1 boincer umatlas    359592 Jan 13 18:51 log.48215263._001914.job.log.tgz.1
[2026-01-13 18:52:42] -rw------- 1 boincer umatlas      7841 Jan 13 18:51 heartbeat.json
[2026-01-13 18:52:42] -rw-r--r-- 1 boincer umatlas        27 Jan 13 18:52 wrapper_checkpoint.txt
[2026-01-13 18:52:42] -rw-r--r-- 1 boincer umatlas      8192 Jan 13 18:52 boinc_mmap_file
[2026-01-13 18:52:42] -rw------- 1 boincer umatlas        95 Jan 13 18:52 pilot_heartbeat.json
[2026-01-13 18:52:42] -rw------- 1 boincer umatlas      5003 Jan 13 18:52 pilotlog.txt
[2026-01-13 18:52:42] -rw------- 1 boincer umatlas    441328 Jan 13 18:52 log.48215263._001914.job.log.1
[2026-01-13 18:52:42] -rw------- 1 boincer umatlas       357 Jan 13 18:52 output.list
[2026-01-13 18:52:42] -rw-r--r-- 1 boincer umatlas       620 Jan 13 18:52 runtime_log
[2026-01-13 18:52:42] -rw------- 1 boincer umatlas    819200 Jan 13 18:52 result.tar.gz
[2026-01-13 18:52:42] -rw------- 1 boincer umatlas       659 Jan 13 18:52 eJwKDmlP1z8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmuYoKDmZxozHo.diag
[2026-01-13 18:52:42] -rw-r--r-- 1 boincer umatlas      9344 Jan 13 18:52 runtime_log.err
[2026-01-13 18:52:42] -rw-r--r-- 1 boincer umatlas     21933 Jan 13 18:52 stderr.txt
[2026-01-13 18:52:42] HITS file was successfully produced:
[2026-01-13 18:52:42] -rw------- 1 boincer umatlas 153540974 Jan 13 18:51 shared/HITS.pool.root.1
[2026-01-13 18:52:42]  *** Contents of shared directory: ***
[2026-01-13 18:52:42] total 736328
[2026-01-13 18:52:42] -rw-r--r-- 2 boincer umatlas 599018743 Jan 13 18:03 ATLAS.root_0
[2026-01-13 18:52:42] -rw-r--r-- 2 boincer umatlas     15847 Jan 13 18:03 start_atlas.sh
[2026-01-13 18:52:42] -rw-r--r-- 2 boincer umatlas    592389 Jan 13 18:03 input.tar.gz
[2026-01-13 18:52:42] -rw------- 1 boincer umatlas 153540974 Jan 13 18:51 HITS.pool.root.1
[2026-01-13 18:52:42] -rw------- 1 boincer umatlas    819200 Jan 13 18:52 result.tar.gz
18:52:44 (31443): run_atlas exited; CPU time 30200.609660
18:52:44 (31443): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN