Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:32:35 (2065950): wrapper (7.7.26015): starting
08:32:35 (2065950): wrapper: running run_atlas (--nthreads 4)
[2026-01-14 08:32:35] Arguments: --nthreads 4
[2026-01-14 08:32:35] Threads: 4
[2026-01-14 08:32:35] Checking for CVMFS
[2026-01-14 08:32:35] No cvmfs_config command found, will try listing directly
[2026-01-14 08:32:35] CVMFS is ok
[2026-01-14 08:32:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 08:32:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 08:32:35] Further information can be found at the LHC@home message board.
[2026-01-14 08:32:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 08:32:35] Checking for apptainer binary...
[2026-01-14 08:32:35] which: no apptainer in ((null))
[2026-01-14 08:32:35] apptainer is not installed, using version from CVMFS
[2026-01-14 08:32:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 08:32:35] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2026-01-14 08:32:35] apptainer works
[2026-01-14 08:32:35] Set ATHENA_PROC_NUMBER=4
[2026-01-14 08:32:35] Set ATHENA_CORE_NUMBER=4
[2026-01-14 08:32:35] Starting ATLAS job with PandaID=6969257425
[2026-01-14 08:32:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 10:38:27]  *** The last 200 lines of the pilot log: ***
[2026-01-14 10:38:27] 2026-01-14 09:29:21,882 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-14 10:38:27] 2026-01-14 09:29:22,880 | INFO     | time since job start (6993s) is within the limit (349056.0s)
[2026-01-14 10:38:27] 2026-01-14 09:29:24,165 | INFO     | monitor loop #479: job 0:6969257425 is in state 'finished'
[2026-01-14 10:38:27] 2026-01-14 09:29:24,165 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 10:38:27] 2026-01-14 09:29:24,886 | INFO     | time since job start (6995s) is within the limit (349056.0s)
[2026-01-14 10:38:27] 2026-01-14 09:29:26,669 | INFO     | monitor loop #480: job 0:6969257425 is in state 'finished'
[2026-01-14 10:38:27] 2026-01-14 09:29:26,669 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 10:38:27] 2026-01-14 09:29:26,894 | INFO     | time since job start (6997s) is within the limit (349056.0s)
[2026-01-14 10:38:27] 2026-01-14 09:29:28,292 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-14 10:38:27] 2026-01-14 09:29:28,313 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2712.9543281250008
[2026-01-14 10:38:27] 2026-01-14 09:29:28,338 | INFO     | using path: /scratch/boinc/var/slot116/slots/0/PanDA_Pilot-6969257425/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 10:38:27] 2026-01-14 09:29:28,338 | INFO     | extracted standard info from prmon json
[2026-01-14 10:38:27] 2026-01-14 09:29:28,339 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 10:38:27] 2026-01-14 09:29:28,339 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 10:38:27] 2026-01-14 09:29:28,339 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 10:38:27] 2026-01-14 09:29:28,339 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 10:38:27] 2026-01-14 09:29:28,341 | INFO     | fitting pss+swap vs Time
[2026-01-14 10:38:27] 2026-01-14 09:29:28,342 | INFO     | sum of square deviations: 459366752.5
[2026-01-14 10:38:27] 2026-01-14 09:29:28,342 | INFO     | sum of deviations: 7823581016.5
[2026-01-14 10:38:27] 2026-01-14 09:29:28,343 | INFO     | mean x: 1768379450.5
[2026-01-14 10:38:27] 2026-01-14 09:29:28,343 | INFO     | mean y: 2349091.4298245613
[2026-01-14 10:38:27] 2026-01-14 09:29:28,343 | INFO     | intersect: -30115328828.459473
[2026-01-14 10:38:27] 2026-01-14 09:29:28,343 | INFO     | chi2: 1.22583144850787
[2026-01-14 10:38:27] 2026-01-14 09:29:28,344 | INFO     | sum of square deviations: 401533110.0
[2026-01-14 10:38:27] 2026-01-14 09:29:28,344 | INFO     | sum of deviations: 7551556732.0
[2026-01-14 10:38:27] 2026-01-14 09:29:28,344 | INFO     | mean x: 1768379298.0
[2026-01-14 10:38:27] 2026-01-14 09:29:28,344 | INFO     | mean y: 2348374.4495412842
[2026-01-14 10:38:27] 2026-01-14 09:29:28,344 | INFO     | intersect: -33255224313.7438
[2026-01-14 10:38:27] 2026-01-14 09:29:28,345 | INFO     | chi2: 1.2278801984689005
[2026-01-14 10:38:27] 2026-01-14 09:29:28,345 | INFO     | current chi2=1.2278801984689005 (change=-0.16713145706322485 %)
[2026-01-14 10:38:27] 2026-01-14 09:29:28,345 | INFO     | right removable region: 108
[2026-01-14 10:38:27] 2026-01-14 09:29:28,345 | INFO     | sum of square deviations: 401533110.0
[2026-01-14 10:38:27] 2026-01-14 09:29:28,346 | INFO     | sum of deviations: -5202468509.0
[2026-01-14 10:38:27] 2026-01-14 09:29:28,346 | INFO     | mean x: 1768379603.0
[2026-01-14 10:38:27] 2026-01-14 09:29:28,346 | INFO     | mean y: 2382601.633027523
[2026-01-14 10:38:27] 2026-01-14 09:29:28,346 | INFO     | intersect: 22914413932.163704
[2026-01-14 10:38:27] 2026-01-14 09:29:28,346 | INFO     | chi2: 0.00932162692886929
[2026-01-14 10:38:27] 2026-01-14 09:29:28,346 | INFO     | current chi2=0.00932162692886929 (change=99.23956699428653 %)
[2026-01-14 10:38:27] 2026-01-14 09:29:28,346 | INFO     | sum of square deviations: 348769330.0
[2026-01-14 10:38:27] 2026-01-14 09:29:28,347 | INFO     | sum of deviations: -4147561105.0
[2026-01-14 10:38:27] 2026-01-14 09:29:28,347 | INFO     | mean x: 1768379755.5
[2026-01-14 10:38:27] 2026-01-14 09:29:28,347 | INFO     | mean y: 2379552.480769231
[2026-01-14 10:38:27] 2026-01-14 09:29:28,347 | INFO     | intersect: 21031932503.083424
[2026-01-14 10:38:27] 2026-01-14 09:29:28,347 | INFO     | chi2: 0.00853226239988359
[2026-01-14 10:38:27] 2026-01-14 09:29:28,347 | INFO     | current chi2=0.00853226239988359 (change=8.46809827307098 %)
[2026-01-14 10:38:27] 2026-01-14 09:29:28,348 | INFO     | left removable region: 20
[2026-01-14 10:38:27] 2026-01-14 09:29:28,348 | INFO     | sum of square deviations: 211285822.0
[2026-01-14 10:38:27] 2026-01-14 09:29:28,348 | INFO     | sum of deviations: -2531940511.5
[2026-01-14 10:38:27] 2026-01-14 09:29:28,348 | INFO     | mean x: 1768379877.5
[2026-01-14 10:38:27] 2026-01-14 09:29:28,348 | INFO     | mean y: 2375384.7386363638
[2026-01-14 10:38:27] 2026-01-14 09:29:28,348 | INFO     | intersect: 21193729396.00617
[2026-01-14 10:38:27] 2026-01-14 09:29:28,349 | INFO     | chi2: 0.007621889299355443
[2026-01-14 10:38:27] 2026-01-14 09:29:28,349 | INFO     | current memory leak: -11.98 B/s (using 88 data points, chi2=0.01)
[2026-01-14 10:38:27] 2026-01-14 09:29:28,349 | INFO     | could have reported an average CPU frequency of 2695 MHz (7 samples)
[2026-01-14 10:38:27] 2026-01-14 09:29:28,349 | INFO     | ..............................
[2026-01-14 10:38:27] 2026-01-14 09:29:28,349 | INFO     | . Timing measurements:
[2026-01-14 10:38:27] 2026-01-14 09:29:28,349 | INFO     | . get job = 0 s
[2026-01-14 10:38:27] 2026-01-14 09:29:28,349 | INFO     | . initial setup = 1 s
[2026-01-14 10:38:27] 2026-01-14 09:29:28,350 | INFO     | . payload setup = 8 s
[2026-01-14 10:38:27] 2026-01-14 09:29:28,350 | INFO     | . stage-in = 0 s
[2026-01-14 10:38:27] 2026-01-14 09:29:28,350 | INFO     | . payload execution = 6955 s
[2026-01-14 10:38:27] 2026-01-14 09:29:28,350 | INFO     | . stage-out = 0 s
[2026-01-14 10:38:27] 2026-01-14 09:29:28,350 | INFO     | . log creation = 0 s
[2026-01-14 10:38:27] 2026-01-14 09:29:28,350 | INFO     | ..............................
[2026-01-14 10:38:27] 2026-01-14 09:29:28,449 | INFO     | 
[2026-01-14 10:38:27] 2026-01-14 09:29:28,450 | INFO     | job summary report
[2026-01-14 10:38:27] 2026-01-14 09:29:28,450 | INFO     | --------------------------------------------------
[2026-01-14 10:38:27] 2026-01-14 09:29:28,450 | INFO     | PanDA job id: 6969257425
[2026-01-14 10:38:27] 2026-01-14 09:29:28,450 | INFO     | task id: 48215263
[2026-01-14 10:38:27] 2026-01-14 09:29:28,450 | INFO     | errors: (none)
[2026-01-14 10:38:27] 2026-01-14 09:29:28,450 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 10:38:27] 2026-01-14 09:29:28,450 | INFO     | pilot state: finished 
[2026-01-14 10:38:27] 2026-01-14 09:29:28,450 | INFO     | transexitcode: 0
[2026-01-14 10:38:27] 2026-01-14 09:29:28,450 | INFO     | exeerrorcode: 0
[2026-01-14 10:38:27] 2026-01-14 09:29:28,450 | INFO     | exeerrordiag: 
[2026-01-14 10:38:27] 2026-01-14 09:29:28,451 | INFO     | exitcode: 0
[2026-01-14 10:38:27] 2026-01-14 09:29:28,451 | INFO     | exitmsg: OK
[2026-01-14 10:38:27] 2026-01-14 09:29:28,451 | INFO     | cpuconsumptiontime: 26289 s
[2026-01-14 10:38:27] 2026-01-14 09:29:28,451 | INFO     | nevents: 400
[2026-01-14 10:38:27] 2026-01-14 09:29:28,451 | INFO     | neventsw: 0
[2026-01-14 10:38:27] 2026-01-14 09:29:28,451 | INFO     | pid: 2093705
[2026-01-14 10:38:27] 2026-01-14 09:29:28,451 | INFO     | pgrp: 2093705
[2026-01-14 10:38:27] 2026-01-14 09:29:28,451 | INFO     | corecount: 4
[2026-01-14 10:38:27] 2026-01-14 09:29:28,451 | INFO     | event service: False
[2026-01-14 10:38:27] 2026-01-14 09:29:28,451 | INFO     | sizes: {0: 2283783, 1: 2283982, 7: 2284244, 12: 2284272, 6968: 2311825, 6971: 2320847, 6972: 2321031, 6981: 2321225}
[2026-01-14 10:38:27] 2026-01-14 09:29:28,451 | INFO     | --------------------------------------------------
[2026-01-14 10:38:27] 2026-01-14 09:29:28,451 | INFO     | 
[2026-01-14 10:38:27] 2026-01-14 09:29:28,452 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2026-01-14 10:38:27] 2026-01-14 09:29:28,484 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 10:38:27] 2026-01-14 09:29:28,484 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 10:38:27] 2026-01-14 09:29:28,484 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 10:38:27] 2026-01-14 09:29:28,485 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 10:38:27] 2026-01-14 09:29:28,485 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 10:38:27] 2026-01-14 09:29:28,485 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 10:38:27] 2026-01-14 09:29:28,485 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 10:38:27] 2026-01-14 09:29:28,485 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 10:38:27] 2026-01-14 09:29:28,485 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 10:38:27] 2026-01-14 09:29:28,485 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 10:38:27] 2026-01-14 09:29:28,485 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 10:38:27] 2026-01-14 09:29:28,485 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 10:38:27] 2026-01-14 09:29:28,485 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 10:38:27] 2026-01-14 09:29:28,486 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 10:38:27] 2026-01-14 09:29:28,486 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 10:38:27] 2026-01-14 09:29:28,486 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 10:38:27] 2026-01-14 09:29:28,486 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 10:38:27] 2026-01-14 09:29:28,486 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 10:38:27] 2026-01-14 09:29:28,486 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 10:38:27] 2026-01-14 09:29:28,486 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 10:38:27] 2026-01-14 09:29:28,486 | INFO     | job 6969257425 has completed (purged errors)
[2026-01-14 10:38:27] 2026-01-14 09:29:28,486 | INFO     | overall cleanup function is called
[2026-01-14 10:38:27] 2026-01-14 09:29:29,496 | INFO     | --- collectZombieJob: --- 10, [2093705]
[2026-01-14 10:38:27] 2026-01-14 09:29:29,496 | INFO     | zombie collector waiting for pid 2093705
[2026-01-14 10:38:27] 2026-01-14 09:29:29,496 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 10:38:27] 2026-01-14 09:29:29,496 | INFO     | collected zombie processes
[2026-01-14 10:38:27] 2026-01-14 09:29:29,496 | INFO     | will attempt to kill all subprocesses of pid=2093705
[2026-01-14 10:38:27] 2026-01-14 09:29:30,277 | INFO     | process IDs to be killed: [2093705] (in reverse order)
[2026-01-14 10:38:27] 2026-01-14 09:29:30,538 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 10:38:27] 2026-01-14 09:29:30,538 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 10:38:27] 2026-01-14 09:29:30,570 | INFO     | did not find any defunct processes belonging to 2093705
[2026-01-14 10:38:27] 2026-01-14 09:29:30,599 | INFO     | did not find any defunct processes belonging to 2093705
[2026-01-14 10:38:27] 2026-01-14 09:29:30,600 | INFO     | ready for new job
[2026-01-14 10:38:27] 2026-01-14 09:29:30,600 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 10:38:27] 2026-01-14 09:29:30,602 | INFO     | ***************************************
[2026-01-14 10:38:27] 2026-01-14 09:29:30,602 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 10:38:27] 2026-01-14 09:29:30,602 | INFO     | ***************************************
[2026-01-14 10:38:27] 2026-01-14 09:29:30,602 | INFO     | 
[2026-01-14 10:38:27] 2026-01-14 09:29:30,611 | INFO     | architecture information:
[2026-01-14 10:38:27] 2026-01-14 09:29:30,611 | INFO     | executing command: cat /etc/os-release
[2026-01-14 10:38:27] 2026-01-14 09:29:30,638 | INFO     | cat /etc/os-release:
[2026-01-14 10:38:27] NAME="CentOS Linux"
[2026-01-14 10:38:27] VERSION="7 (Core)"
[2026-01-14 10:38:27] ID="centos"
[2026-01-14 10:38:27] ID_LIKE="rhel fedora"
[2026-01-14 10:38:27] VERSION_ID="7"
[2026-01-14 10:38:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 10:38:27] ANSI_COLOR="0;31"
[2026-01-14 10:38:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 10:38:27] HOME_URL="https://www.centos.org/"
[2026-01-14 10:38:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 10:38:27] 
[2026-01-14 10:38:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 10:38:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 10:38:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 10:38:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 10:38:27] 
[2026-01-14 10:38:27] 2026-01-14 09:29:30,638 | INFO     | ***************************************
[2026-01-14 10:38:27] 2026-01-14 09:29:31,141 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2026-01-14 10:38:27] 2026-01-14 09:29:31,167 | INFO     | sufficient remaining disk space (3313651154944 B)
[2026-01-14 10:38:27] 2026-01-14 09:29:31,167 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 10:38:27] 2026-01-14 09:29:31,168 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 10:38:27] 2026-01-14 09:29:31,168 | INFO     | update_server=False
[2026-01-14 10:38:27] 2026-01-14 09:29:31,168 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 10:38:27] 2026-01-14 09:29:31,168 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 10:38:27] 2026-01-14 09:29:31,168 | INFO     | aborting loop
[2026-01-14 10:38:27] 2026-01-14 09:29:31,169 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 10:38:27] 2026-01-14 09:29:31,541 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 10:38:27] 2026-01-14 09:29:31,660 | INFO     | all data control threads have been joined
[2026-01-14 10:38:27] 2026-01-14 09:29:32,051 | INFO     | all payload control threads have been joined
[2026-01-14 10:38:27] 2026-01-14 09:29:32,173 | INFO     | [job] retrieve thread has finished
[2026-01-14 10:38:27] 2026-01-14 09:29:32,174 | INFO     | [job] job monitor thread has finished
[2026-01-14 10:38:27] 2026-01-14 09:29:32,407 | INFO     | [job] validate thread has finished
[2026-01-14 10:38:27] 2026-01-14 09:29:32,576 | INFO     | all job control threads have been joined
[2026-01-14 10:38:27] 2026-01-14 09:29:32,616 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 10:38:27] 2026-01-14 09:29:32,627 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 10:38:27] 2026-01-14 09:29:32,664 | INFO     | [data] control thread has finished
[2026-01-14 10:38:27] 2026-01-14 09:29:33,056 | INFO     | [payload] control thread has finished
[2026-01-14 10:38:27] 2026-01-14 09:29:33,165 | INFO     | [payload] validate_post thread has finished
[2026-01-14 10:38:27] 2026-01-14 09:29:33,182 | INFO     | [data] copytool_in thread has finished
[2026-01-14 10:38:27] 2026-01-14 09:29:33,459 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 10:38:27] 2026-01-14 09:29:33,468 | INFO     | [payload] failed_post thread has finished
[2026-01-14 10:38:27] 2026-01-14 09:29:33,546 | INFO     | [data] copytool_out thread has finished
[2026-01-14 10:38:27] 2026-01-14 09:29:33,561 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 10:38:27] 2026-01-14 09:29:33,582 | INFO     | [job] control thread has finished
[2026-01-14 10:38:27] 2026-01-14 09:29:34,464 | INFO     | [job] queue monitor thread has finished
[2026-01-14 10:38:27] 2026-01-14 09:29:35,174 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 10:38:27] 2026-01-14 09:29:41,513 | INFO     | job.realtimelogging is not enabled
[2026-01-14 10:38:27] 2026-01-14 09:29:42,518 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 10:38:27] 2026-01-14 09:30:00,885 | INFO     | PID=2073077 has CPU usage=9.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-14 10:38:27] 2026-01-14 09:30:00,885 | INFO     | .. there are 10 such processes running
[2026-01-14 10:38:27] 2026-01-14 09:30:00,885 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 10:38:27] 2026-01-14 09:30:00,885 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 10:38:27] 2026-01-14 09:30:00,885 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 10:38:27] 2026-01-14 09:30:00,897 | INFO     | [monitor] cgroup control has ended
[2026-01-14 10:38:27] 2026-01-14 09:30:01,062 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22589043693376)>', '<ExcThread(monitor, started 22588803741440)>']
[2026-01-14 10:38:27] 2026-01-14 09:30:01,890 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 10:38:27] 2026-01-14 09:30:01,894 | INFO     | [monitor] control thread has ended
[2026-01-14 10:38:27] 2026-01-14 09:30:06,087 | INFO     | all workflow threads have been joined
[2026-01-14 10:38:27] 2026-01-14 09:30:06,087 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 10:38:27] 2026-01-14 09:30:06,088 | INFO     | traces error code: 0
[2026-01-14 10:38:27] 2026-01-14 09:30:06,088 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 10:38:27] 2026-01-14 09:30:06,228 [wrapper] ==== pilot stdout END ====
[2026-01-14 10:38:27] 2026-01-14 09:30:06,232 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 10:38:27] 2026-01-14 09:30:06,236 [wrapper] pilotpid: 2073077
[2026-01-14 10:38:27] 2026-01-14 09:30:06,240 [wrapper] Pilot exit status: 0
[2026-01-14 10:38:27] 2026-01-14 09:30:06,256 [wrapper] pandaids: 6969257425
[2026-01-14 10:38:27] 2026-01-14 09:30:06,430 [wrapper] cleanup supervisor_pilot 2406219 2073078
[2026-01-14 10:38:27] 2026-01-14 09:30:06,435 [wrapper] Test setup, not cleaning
[2026-01-14 10:38:27] 2026-01-14 09:30:06,438 [wrapper] apfmon messages muted
[2026-01-14 10:38:27] 2026-01-14 09:30:06,442 [wrapper] ==== wrapper stdout END ====
[2026-01-14 10:38:27] 2026-01-14 09:30:06,445 [wrapper] ==== wrapper stderr END ====
[2026-01-14 10:38:27]  *** Error codes and diagnostics ***
[2026-01-14 10:38:27]     "exeErrorCode": 0,
[2026-01-14 10:38:27]     "exeErrorDiag": "",
[2026-01-14 10:38:27]     "pilotErrorCode": 0,
[2026-01-14 10:38:27]     "pilotErrorDiag": "",
[2026-01-14 10:38:27]  *** Listing of results directory ***
[2026-01-14 10:38:27] total 739180
[2026-01-14 10:38:27] -rwx------ 1 boinc boinc     36322 Jan 13 22:47 runpilot2-wrapper.sh
[2026-01-14 10:38:27] -rw-r--r-- 1 boinc boinc    579449 Jan 13 22:50 pilot3.tar.gz
[2026-01-14 10:38:27] -rw-r--r-- 1 boinc boinc      5112 Jan 13 22:50 queuedata.json
[2026-01-14 10:38:27] -rw-r--r-- 1 boinc boinc       100 Jan 14 08:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 10:38:27] -rwxr-xr-x 1 boinc boinc      7986 Jan 14 08:32 run_atlas
[2026-01-14 10:38:27] -rw-r--r-- 1 boinc boinc       105 Jan 14 08:32 job.xml
[2026-01-14 10:38:27] -rw-r--r-- 2 boinc boinc 594041090 Jan 14 08:32 EVNT.32794306._000052.pool.root.1
[2026-01-14 10:38:27] -rw-r--r-- 1 boinc boinc      6692 Jan 14 08:32 init_data.xml
[2026-01-14 10:38:27] -rw-r--r-- 2 boinc boinc     15847 Jan 14 08:32 start_atlas.sh
[2026-01-14 10:38:27] drwxrwx--x 2 boinc boinc      4096 Jan 14 08:32 shared
[2026-01-14 10:38:27] -rw-r--r-- 2 boinc boinc    592394 Jan 14 08:32 input.tar.gz
[2026-01-14 10:38:27] -rw-r--r-- 1 boinc boinc         0 Jan 14 08:32 boinc_lockfile
[2026-01-14 10:38:27] -rw-r--r-- 1 boinc boinc      2503 Jan 14 08:32 pandaJob.out
[2026-01-14 10:38:27] -rw------- 1 boinc boinc    997226 Jan 14 08:32 agis_schedconf.cvmfs.json
[2026-01-14 10:38:27] -rw------- 1 boinc boinc   1516246 Jan 14 08:32 agis_ddmendpoints.agis.ALL.json
[2026-01-14 10:38:27] drwx------ 5 boinc boinc      4096 Jan 14 08:32 pilot3
[2026-01-14 10:38:27] -rw------- 1 boinc boinc 156374220 Jan 14 10:28 HITS.48215263._001286.pool.root.1
[2026-01-14 10:38:27] -rw-r--r-- 1 boinc boinc       530 Jan 14 10:28 boinc_task_state.xml
[2026-01-14 10:38:27] -rw------- 1 boinc boinc      1025 Jan 14 10:29 memory_monitor_summary.json
[2026-01-14 10:38:27] -rw------- 1 boinc boinc    295961 Jan 14 10:29 log.48215263._001286.job.log.tgz.1
[2026-01-14 10:38:27] -rw------- 1 boinc boinc        95 Jan 14 10:29 pilot_heartbeat.json
[2026-01-14 10:38:27] -rw------- 1 boinc boinc      7777 Jan 14 10:29 heartbeat.json
[2026-01-14 10:38:27] -rw------- 1 boinc boinc      4908 Jan 14 10:30 pilotlog.txt
[2026-01-14 10:38:27] -rw------- 1 boinc boinc    992111 Jan 14 10:30 log.48215263._001286.job.log.1
[2026-01-14 10:38:27] -rw------- 1 boinc boinc       357 Jan 14 10:30 output.list
[2026-01-14 10:38:27] -rw-r--r-- 1 boinc boinc       620 Jan 14 10:30 runtime_log
[2026-01-14 10:38:27] -rw------- 1 boinc boinc   1310720 Jan 14 10:30 result.tar.gz
[2026-01-14 10:38:27] -rw------- 1 boinc boinc       662 Jan 14 10:30 xxxNDmMP1z8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmVVoKDmOr9vsm.diag
[2026-01-14 10:38:27] -rw-r--r-- 1 boinc boinc      9222 Jan 14 10:30 runtime_log.err
[2026-01-14 10:38:27] -rw-r--r-- 1 boinc boinc        26 Jan 14 10:38 wrapper_checkpoint.txt
[2026-01-14 10:38:27] -rw-r--r-- 1 boinc boinc      8192 Jan 14 10:38 boinc_mmap_file
[2026-01-14 10:38:27] -rw-r--r-- 1 boinc boinc     21171 Jan 14 10:38 stderr.txt
[2026-01-14 10:38:27] HITS file was successfully produced:
[2026-01-14 10:38:27] -rw------- 1 boinc boinc 156374220 Jan 14 10:28 shared/HITS.pool.root.1
[2026-01-14 10:38:27]  *** Contents of shared directory: ***
[2026-01-14 10:38:27] total 734716
[2026-01-14 10:38:27] -rw-r--r-- 2 boinc boinc 594041090 Jan 14 08:32 ATLAS.root_0
[2026-01-14 10:38:27] -rw-r--r-- 2 boinc boinc     15847 Jan 14 08:32 start_atlas.sh
[2026-01-14 10:38:27] -rw-r--r-- 2 boinc boinc    592394 Jan 14 08:32 input.tar.gz
[2026-01-14 10:38:27] -rw------- 1 boinc boinc 156374220 Jan 14 10:28 HITS.pool.root.1
[2026-01-14 10:38:27] -rw------- 1 boinc boinc   1310720 Jan 14 10:30 result.tar.gz
10:38:28 (2065950): run_atlas exited; CPU time 26680.732341
10:38:28 (2065950): called boinc_finish(0)

</stderr_txt>
]]>

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