Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:42:44 (640585): wrapper (7.7.26015): starting
17:42:44 (640585): wrapper: running run_atlas (--nthreads 8)
[2026-01-13 17:42:44] Arguments: --nthreads 8
[2026-01-13 17:42:44] Threads: 8
[2026-01-13 17:42:44] Checking for CVMFS
[2026-01-13 17:42:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-13 17:42:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-13 17:42:44] Running cvmfs_config stat atlas.cern.ch
[2026-01-13 17:42:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-13 17:42:45] 2.13.3.0 7236 29253 176524 155107 2 501 21968746 40960001 21762 16776704 0 47702172 99.741 30173898 39125 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-13 17:42:45] CVMFS is ok
[2026-01-13 17:42:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 17:42:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 17:42:45] Further information can be found at the LHC@home message board.
[2026-01-13 17:42:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 17:42:45] Checking for apptainer binary...
[2026-01-13 17:42:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-13 17:42:45] Running /usr/bin/apptainer --version
[2026-01-13 17:42:45] apptainer version 1.4.5-2.el9
[2026-01-13 17:42:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 17:42:45] c-212-11.aglt2.org
[2026-01-13 17:42:45] apptainer works
[2026-01-13 17:42:45] Set ATHENA_PROC_NUMBER=8
[2026-01-13 17:42:45] Set ATHENA_CORE_NUMBER=8
[2026-01-13 17:42:45] Starting ATLAS job with PandaID=6969256600
[2026-01-13 17:42:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 18:56:47]  *** The last 200 lines of the pilot log: ***
[2026-01-13 18:56:47] 2026-01-13 23:55:25,680 | INFO     | job 6969256600 has state=finished
[2026-01-13 18:56:47] 2026-01-13 23:55:25,681 | INFO     | preparing for final server update for job 6969256600 in state='finished'
[2026-01-13 18:56:47] 2026-01-13 23:55:25,681 | INFO     | this job has now completed (state=finished)
[2026-01-13 18:56:47] 2026-01-13 23:55:25,681 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-13 18:56:47] 2026-01-13 23:55:25,681 | INFO     | log transfer has been attempted: DONE
[2026-01-13 18:56:47] 2026-01-13 23:55:25,681 | INFO     | job 6969256600 has finished - writing final server update
[2026-01-13 18:56:47] 2026-01-13 23:55:25,682 | INFO     | total number of processed events: 400 (read)
[2026-01-13 18:56:47] 2026-01-13 23:55:25,682 | INFO     | executing command: lscpu
[2026-01-13 18:56:47] 2026-01-13 23:55:25,930 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-13 18:56:47] 2026-01-13 23:55:26,048 | INFO     | time since job start (4327s) is within the limit (349056.0s)
[2026-01-13 18:56:47] 2026-01-13 23:55:26,521 | INFO     | monitor loop #308: job 0:6969256600 is in state 'finished'
[2026-01-13 18:56:47] 2026-01-13 23:55:26,522 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 18:56:47] 2026-01-13 23:55:28,058 | INFO     | time since job start (4329s) is within the limit (349056.0s)
[2026-01-13 18:56:47] 2026-01-13 23:55:29,073 | INFO     | monitor loop #309: job 0:6969256600 is in state 'finished'
[2026-01-13 18:56:47] 2026-01-13 23:55:29,074 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 18:56:47] 2026-01-13 23:55:30,063 | INFO     | time since job start (4331s) is within the limit (349056.0s)
[2026-01-13 18:56:47] 2026-01-13 23:55:31,578 | INFO     | monitor loop #310: job 0:6969256600 is in state 'finished'
[2026-01-13 18:56:47] 2026-01-13 23:55:31,579 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 18:56:47] 2026-01-13 23:55:32,069 | INFO     | time since job start (4333s) is within the limit (349056.0s)
[2026-01-13 18:56:47] 2026-01-13 23:55:34,076 | INFO     | time since job start (4335s) is within the limit (349056.0s)
[2026-01-13 18:56:47] 2026-01-13 23:55:34,100 | INFO     | monitor loop #311: job 0:6969256600 is in state 'finished'
[2026-01-13 18:56:47] 2026-01-13 23:55:34,101 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 18:56:47] 2026-01-13 23:55:36,084 | INFO     | time since job start (4337s) is within the limit (349056.0s)
[2026-01-13 18:56:47] 2026-01-13 23:55:36,605 | INFO     | monitor loop #312: job 0:6969256600 is in state 'finished'
[2026-01-13 18:56:47] 2026-01-13 23:55:36,605 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 18:56:47] 2026-01-13 23:55:38,089 | INFO     | time since job start (4339s) is within the limit (349056.0s)
[2026-01-13 18:56:47] 2026-01-13 23:55:39,131 | INFO     | monitor loop #313: job 0:6969256600 is in state 'finished'
[2026-01-13 18:56:47] 2026-01-13 23:55:39,131 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 18:56:47] 2026-01-13 23:55:39,995 | INFO     | PID=653936 has CPU usage=8.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-13 18:56:47] 2026-01-13 23:55:39,996 | INFO     | .. there are 19 such processes running
[2026-01-13 18:56:47] 2026-01-13 23:55:40,998 | INFO     | time since job start (4341s) is within the limit (349056.0s)
[2026-01-13 18:56:47] 2026-01-13 23:55:41,637 | INFO     | monitor loop #314: job 0:6969256600 is in state 'finished'
[2026-01-13 18:56:47] 2026-01-13 23:55:41,638 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 18:56:47] 2026-01-13 23:55:43,005 | INFO     | time since job start (4344s) is within the limit (349056.0s)
[2026-01-13 18:56:47] 2026-01-13 23:55:44,152 | INFO     | monitor loop #315: job 0:6969256600 is in state 'finished'
[2026-01-13 18:56:47] 2026-01-13 23:55:44,152 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 18:56:47] 2026-01-13 23:55:44,984 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-13 18:56:47] 2026-01-13 23:55:44,993 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3234.4327500000004
[2026-01-13 18:56:47] 2026-01-13 23:55:45,015 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6969256600/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 18:56:47] 2026-01-13 23:55:45,016 | INFO     | extracted standard info from prmon json
[2026-01-13 18:56:47] 2026-01-13 23:55:45,016 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 18:56:47] 2026-01-13 23:55:45,016 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 18:56:47] 2026-01-13 23:55:45,017 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 18:56:47] 2026-01-13 23:55:45,017 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 18:56:47] 2026-01-13 23:55:45,018 | INFO     | fitting pss+swap vs Time
[2026-01-13 18:56:47] 2026-01-13 23:55:45,018 | INFO     | sum of square deviations: 77541875.65079354
[2026-01-13 18:56:47] 2026-01-13 23:55:45,019 | INFO     | sum of deviations: -810143393.8571428
[2026-01-13 18:56:47] 2026-01-13 23:55:45,019 | INFO     | mean x: 1768346458.3174603
[2026-01-13 18:56:47] 2026-01-13 23:55:45,019 | INFO     | mean y: 2572945.1428571427
[2026-01-13 18:56:47] 2026-01-13 23:55:45,019 | INFO     | intersect: 18477934667.217796
[2026-01-13 18:56:47] 2026-01-13 23:55:45,019 | INFO     | chi2: 0.006258511927016715
[2026-01-13 18:56:47] 2026-01-13 23:55:45,019 | INFO     | current memory leak: -10.45 B/s (using 63 data points, chi2=0.01)
[2026-01-13 18:56:47] 2026-01-13 23:55:45,019 | INFO     | could have reported an average CPU frequency of 3225 MHz (6 samples)
[2026-01-13 18:56:47] 2026-01-13 23:55:45,020 | INFO     | ..............................
[2026-01-13 18:56:47] 2026-01-13 23:55:45,020 | INFO     | . Timing measurements:
[2026-01-13 18:56:47] 2026-01-13 23:55:45,020 | INFO     | . get job = 0 s
[2026-01-13 18:56:47] 2026-01-13 23:55:45,020 | INFO     | . initial setup = 3 s
[2026-01-13 18:56:47] 2026-01-13 23:55:45,020 | INFO     | . payload setup = 14 s
[2026-01-13 18:56:47] 2026-01-13 23:55:45,020 | INFO     | . stage-in = 0 s
[2026-01-13 18:56:47] 2026-01-13 23:55:45,020 | INFO     | . payload execution = 4263 s
[2026-01-13 18:56:47] 2026-01-13 23:55:45,020 | INFO     | . stage-out = 1 s
[2026-01-13 18:56:47] 2026-01-13 23:55:45,020 | INFO     | . log creation = 0 s
[2026-01-13 18:56:47] 2026-01-13 23:55:45,020 | INFO     | ..............................
[2026-01-13 18:56:47] 2026-01-13 23:55:45,026 | INFO     | time since job start (4346s) is within the limit (349056.0s)
[2026-01-13 18:56:47] 2026-01-13 23:55:45,267 | INFO     | 
[2026-01-13 18:56:47] 2026-01-13 23:55:45,267 | INFO     | job summary report
[2026-01-13 18:56:47] 2026-01-13 23:55:45,268 | INFO     | --------------------------------------------------
[2026-01-13 18:56:47] 2026-01-13 23:55:45,268 | INFO     | PanDA job id: 6969256600
[2026-01-13 18:56:47] 2026-01-13 23:55:45,268 | INFO     | task id: 48215263
[2026-01-13 18:56:47] 2026-01-13 23:55:45,268 | INFO     | errors: (none)
[2026-01-13 18:56:47] 2026-01-13 23:55:45,268 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 18:56:47] 2026-01-13 23:55:45,268 | INFO     | pilot state: finished 
[2026-01-13 18:56:47] 2026-01-13 23:55:45,268 | INFO     | transexitcode: 0
[2026-01-13 18:56:47] 2026-01-13 23:55:45,268 | INFO     | exeerrorcode: 0
[2026-01-13 18:56:47] 2026-01-13 23:55:45,268 | INFO     | exeerrordiag: 
[2026-01-13 18:56:47] 2026-01-13 23:55:45,268 | INFO     | exitcode: 0
[2026-01-13 18:56:47] 2026-01-13 23:55:45,268 | INFO     | exitmsg: OK
[2026-01-13 18:56:47] 2026-01-13 23:55:45,268 | INFO     | cpuconsumptiontime: 18857 s
[2026-01-13 18:56:47] 2026-01-13 23:55:45,268 | INFO     | nevents: 400
[2026-01-13 18:56:47] 2026-01-13 23:55:45,268 | INFO     | neventsw: 0
[2026-01-13 18:56:47] 2026-01-13 23:55:45,268 | INFO     | pid: 677926
[2026-01-13 18:56:47] 2026-01-13 23:55:45,268 | INFO     | pgrp: 677926
[2026-01-13 18:56:47] 2026-01-13 23:55:45,268 | INFO     | corecount: 8
[2026-01-13 18:56:47] 2026-01-13 23:55:45,269 | INFO     | event service: False
[2026-01-13 18:56:47] 2026-01-13 23:55:45,269 | INFO     | sizes: {0: 2283767, 1: 2283966, 11: 2283966, 12: 2284256, 22: 2284284, 4282: 2310447, 4283: 2310574, 4285: 2319628, 4289: 2319684, 4311: 2319878}
[2026-01-13 18:56:47] 2026-01-13 23:55:45,269 | INFO     | --------------------------------------------------
[2026-01-13 18:56:47] 2026-01-13 23:55:45,269 | INFO     | 
[2026-01-13 18:56:47] 2026-01-13 23:55:45,269 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2026-01-13 18:56:47] 2026-01-13 23:55:45,351 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 18:56:47] 2026-01-13 23:55:45,351 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 18:56:47] 2026-01-13 23:55:45,351 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 18:56:47] 2026-01-13 23:55:45,351 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 18:56:47] 2026-01-13 23:55:45,351 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 18:56:47] 2026-01-13 23:55:45,352 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 18:56:47] 2026-01-13 23:55:45,352 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 18:56:47] 2026-01-13 23:55:45,352 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 18:56:47] 2026-01-13 23:55:45,352 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 18:56:47] 2026-01-13 23:55:45,352 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 18:56:47] 2026-01-13 23:55:45,352 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 18:56:47] 2026-01-13 23:55:45,352 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 18:56:47] 2026-01-13 23:55:45,352 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 18:56:47] 2026-01-13 23:55:45,352 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 18:56:47] 2026-01-13 23:55:45,352 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 18:56:47] 2026-01-13 23:55:45,352 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 18:56:47] 2026-01-13 23:55:45,352 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 18:56:47] 2026-01-13 23:55:45,353 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 18:56:47] 2026-01-13 23:55:45,353 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 18:56:47] 2026-01-13 23:55:45,353 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 18:56:47] 2026-01-13 23:55:45,353 | INFO     | job 6969256600 has completed (purged errors)
[2026-01-13 18:56:47] 2026-01-13 23:55:45,353 | INFO     | overall cleanup function is called
[2026-01-13 18:56:47] 2026-01-13 23:55:46,361 | INFO     | --- collectZombieJob: --- 10, [677926]
[2026-01-13 18:56:47] 2026-01-13 23:55:46,361 | INFO     | zombie collector waiting for pid 677926
[2026-01-13 18:56:47] 2026-01-13 23:55:46,362 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 18:56:47] 2026-01-13 23:55:46,362 | INFO     | collected zombie processes
[2026-01-13 18:56:47] 2026-01-13 23:55:46,362 | INFO     | will attempt to kill all subprocesses of pid=677926
[2026-01-13 18:56:47] 2026-01-13 23:55:47,008 | INFO     | process IDs to be killed: [677926] (in reverse order)
[2026-01-13 18:56:47] 2026-01-13 23:55:47,247 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 18:56:47] 2026-01-13 23:55:47,247 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 18:56:47] 2026-01-13 23:55:47,278 | INFO     | did not find any defunct processes belonging to 677926
[2026-01-13 18:56:47] 2026-01-13 23:55:47,323 | INFO     | did not find any defunct processes belonging to 677926
[2026-01-13 18:56:47] 2026-01-13 23:55:47,323 | INFO     | ready for new job
[2026-01-13 18:56:47] 2026-01-13 23:55:47,323 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 18:56:47] 2026-01-13 23:55:47,325 | INFO     | ***************************************
[2026-01-13 18:56:47] 2026-01-13 23:55:47,325 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 18:56:47] 2026-01-13 23:55:47,325 | INFO     | ***************************************
[2026-01-13 18:56:47] 2026-01-13 23:55:47,325 | INFO     | 
[2026-01-13 18:56:47] 2026-01-13 23:55:47,330 | INFO     | architecture information:
[2026-01-13 18:56:47] 2026-01-13 23:55:47,330 | INFO     | executing command: cat /etc/os-release
[2026-01-13 18:56:47] 2026-01-13 23:55:47,380 | INFO     | cat /etc/os-release:
[2026-01-13 18:56:47] NAME="CentOS Linux"
[2026-01-13 18:56:47] VERSION="7 (Core)"
[2026-01-13 18:56:47] ID="centos"
[2026-01-13 18:56:47] ID_LIKE="rhel fedora"
[2026-01-13 18:56:47] VERSION_ID="7"
[2026-01-13 18:56:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 18:56:47] ANSI_COLOR="0;31"
[2026-01-13 18:56:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 18:56:47] HOME_URL="https://www.centos.org/"
[2026-01-13 18:56:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 18:56:47] 
[2026-01-13 18:56:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 18:56:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 18:56:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 18:56:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 18:56:47] 
[2026-01-13 18:56:47] 2026-01-13 23:55:47,381 | INFO     | ***************************************
[2026-01-13 18:56:47] 2026-01-13 23:55:47,885 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2026-01-13 18:56:47] 2026-01-13 23:55:47,940 | INFO     | sufficient remaining disk space (120816926720 B)
[2026-01-13 18:56:47] 2026-01-13 23:55:47,941 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 18:56:47] 2026-01-13 23:55:47,941 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 18:56:47] 2026-01-13 23:55:47,941 | INFO     | update_server=False
[2026-01-13 18:56:47] 2026-01-13 23:55:47,941 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 18:56:47] 2026-01-13 23:55:47,941 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 18:56:47] 2026-01-13 23:55:47,942 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 18:56:47] 2026-01-13 23:55:47,942 | INFO     | aborting loop
[2026-01-13 18:56:47] 2026-01-13 23:55:48,082 | INFO     | all job control threads have been joined
[2026-01-13 18:56:47] 2026-01-13 23:55:48,337 | INFO     | all data control threads have been joined
[2026-01-13 18:56:47] 2026-01-13 23:55:48,359 | INFO     | all payload control threads have been joined
[2026-01-13 18:56:47] 2026-01-13 23:55:48,946 | INFO     | [job] retrieve thread has finished
[2026-01-13 18:56:47] 2026-01-13 23:55:48,949 | INFO     | [job] job monitor thread has finished
[2026-01-13 18:56:47] 2026-01-13 23:55:49,088 | INFO     | [job] control thread has finished
[2026-01-13 18:56:47] 2026-01-13 23:55:49,343 | INFO     | [data] control thread has finished
[2026-01-13 18:56:47] 2026-01-13 23:55:49,365 | INFO     | [payload] control thread has finished
[2026-01-13 18:56:47] 2026-01-13 23:55:49,565 | INFO     | [payload] validate_post thread has finished
[2026-01-13 18:56:47] 2026-01-13 23:55:49,592 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 18:56:47] 2026-01-13 23:55:49,640 | INFO     | [job] validate thread has finished
[2026-01-13 18:56:47] 2026-01-13 23:55:49,645 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 18:56:47] 2026-01-13 23:55:49,743 | INFO     | [payload] failed_post thread has finished
[2026-01-13 18:56:47] 2026-01-13 23:55:49,950 | INFO     | [data] copytool_out thread has finished
[2026-01-13 18:56:47] 2026-01-13 23:55:49,991 | INFO     | [data] copytool_in thread has finished
[2026-01-13 18:56:47] 2026-01-13 23:55:50,122 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 18:56:47] 2026-01-13 23:55:50,306 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 18:56:47] 2026-01-13 23:55:51,128 | INFO     | [job] queue monitor thread has finished
[2026-01-13 18:56:47] 2026-01-13 23:55:51,406 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 18:56:47] 2026-01-13 23:55:55,414 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 18:56:47] 2026-01-13 23:55:58,186 | INFO     | job.realtimelogging is not enabled
[2026-01-13 18:56:47] 2026-01-13 23:55:59,192 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 18:56:47] 2026-01-13 23:56:18,750 | INFO     | PID=653936 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-13 18:56:47] 2026-01-13 23:56:18,750 | INFO     | .. there are 19 such processes running
[2026-01-13 18:56:47] 2026-01-13 23:56:18,750 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 18:56:47] 2026-01-13 23:56:18,751 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 18:56:47] 2026-01-13 23:56:18,751 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 18:56:47] 2026-01-13 23:56:26,662 | INFO     | [monitor] cgroup control has ended
[2026-01-13 18:56:47] 2026-01-13 23:56:28,211 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140337434412864)>', '<ExcThread(monitor, started 140337091692288)>']
[2026-01-13 18:56:47] 2026-01-13 23:56:28,817 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 18:56:47] 2026-01-13 23:56:28,817 | INFO     | [monitor] control thread has ended
[2026-01-13 18:56:47] 2026-01-13 23:56:33,237 | INFO     | all workflow threads have been joined
[2026-01-13 18:56:47] 2026-01-13 23:56:33,238 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 18:56:47] 2026-01-13 23:56:33,238 | INFO     | traces error code: 0
[2026-01-13 18:56:47] 2026-01-13 23:56:33,238 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 18:56:47] 2026-01-13 23:56:33,363 [wrapper] ==== pilot stdout END ====
[2026-01-13 18:56:47] 2026-01-13 23:56:33,396 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 18:56:47] 2026-01-13 23:56:33,412 [wrapper] pilotpid: 653936
[2026-01-13 18:56:47] 2026-01-13 23:56:33,459 [wrapper] Pilot exit status: 0
[2026-01-13 18:56:47] 2026-01-13 23:56:33,551 [wrapper] pandaids: 6969256600
[2026-01-13 18:56:47] 2026-01-13 23:56:33,711 [wrapper] cleanup supervisor_pilot  926735 653937
[2026-01-13 18:56:47] 2026-01-13 23:56:33,746 [wrapper] Test setup, not cleaning
[2026-01-13 18:56:47] 2026-01-13 23:56:33,779 [wrapper] apfmon messages muted
[2026-01-13 18:56:47] 2026-01-13 23:56:33,789 [wrapper] ==== wrapper stdout END ====
[2026-01-13 18:56:47] 2026-01-13 23:56:33,798 [wrapper] ==== wrapper stderr END ====
[2026-01-13 18:56:47]  *** Error codes and diagnostics ***
[2026-01-13 18:56:47]     "exeErrorCode": 0,
[2026-01-13 18:56:47]     "exeErrorDiag": "",
[2026-01-13 18:56:47]     "pilotErrorCode": 0,
[2026-01-13 18:56:47]     "pilotErrorDiag": "",
[2026-01-13 18:56:47]  *** Listing of results directory ***
[2026-01-13 18:56:47] total 733760
[2026-01-13 18:56:47] -rw-r--r--. 1 boincer umatlas    579449 Jan 13 16:45 pilot3.tar.gz
[2026-01-13 18:56:47] -rwx------. 1 boincer umatlas     36322 Jan 13 16:46 runpilot2-wrapper.sh
[2026-01-13 18:56:47] -rw-r--r--. 1 boincer umatlas      5112 Jan 13 16:47 queuedata.json
[2026-01-13 18:56:47] -rw-r--r--. 1 boincer umatlas       100 Jan 13 17:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 18:56:47] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 13 17:42 run_atlas
[2026-01-13 18:56:47] -rw-r--r--. 1 boincer umatlas       105 Jan 13 17:42 job.xml
[2026-01-13 18:56:47] -rw-r--r--. 2 boincer umatlas 599715919 Jan 13 17:42 EVNT.32794306._000030.pool.root.1
[2026-01-13 18:56:47] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 17:42 start_atlas.sh
[2026-01-13 18:56:47] drwxrwx--x. 2 boincer umatlas      4096 Jan 13 17:42 shared
[2026-01-13 18:56:47] -rw-r--r--. 2 boincer umatlas    592389 Jan 13 17:42 input.tar.gz
[2026-01-13 18:56:47] -rw-r--r--. 1 boincer umatlas         0 Jan 13 17:42 boinc_lockfile
[2026-01-13 18:56:47] -rw-r--r--. 1 boincer umatlas      2501 Jan 13 17:42 pandaJob.out
[2026-01-13 18:56:47] -rw-------. 1 boincer umatlas        57 Jan 13 17:42 setup.sh.local
[2026-01-13 18:56:47] -rw-------. 1 boincer umatlas    997226 Jan 13 17:43 agis_schedconf.cvmfs.json
[2026-01-13 18:56:47] -rw-------. 1 boincer umatlas   1516246 Jan 13 17:43 agis_ddmendpoints.agis.ALL.json
[2026-01-13 18:56:47] drwx------. 5 boincer umatlas      4096 Jan 13 17:43 pilot3
[2026-01-13 18:56:47] -rw-------. 1 boincer umatlas 145853041 Jan 13 18:54 HITS.48215263._000730.pool.root.1
[2026-01-13 18:56:47] -rw-r--r--. 1 boincer umatlas       530 Jan 13 18:54 boinc_task_state.xml
[2026-01-13 18:56:47] -rw-r--r--. 1 boincer umatlas      6956 Jan 13 18:55 init_data.xml
[2026-01-13 18:56:47] -rw-------. 1 boincer umatlas      1033 Jan 13 18:55 memory_monitor_summary.json
[2026-01-13 18:56:47] -rw-------. 1 boincer umatlas    309998 Jan 13 18:55 log.48215263._000730.job.log.tgz.1
[2026-01-13 18:56:47] -rw-------. 1 boincer umatlas        95 Jan 13 18:55 pilot_heartbeat.json
[2026-01-13 18:56:47] -rw-------. 1 boincer umatlas      7766 Jan 13 18:55 heartbeat.json
[2026-01-13 18:56:47] -rw-------. 1 boincer umatlas      4896 Jan 13 18:56 pilotlog.txt
[2026-01-13 18:56:47] -rw-------. 1 boincer umatlas    627543 Jan 13 18:56 log.48215263._000730.job.log.1
[2026-01-13 18:56:47] -rw-------. 1 boincer umatlas       357 Jan 13 18:56 output.list
[2026-01-13 18:56:47] -rw-r--r--. 1 boincer umatlas       620 Jan 13 18:56 runtime_log
[2026-01-13 18:56:47] -rw-------. 1 boincer umatlas    952320 Jan 13 18:56 result.tar.gz
[2026-01-13 18:56:47] -rw-r--r--. 1 boincer umatlas      9342 Jan 13 18:56 runtime_log.err
[2026-01-13 18:56:47] -rw-------. 1 boincer umatlas       652 Jan 13 18:56 otGNDmPO1z8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmzRoKDmqA5bGn.diag
[2026-01-13 18:56:47] -rw-r--r--. 1 boincer umatlas        27 Jan 13 18:56 wrapper_checkpoint.txt
[2026-01-13 18:56:47] -rw-r--r--. 1 boincer umatlas      8192 Jan 13 18:56 boinc_mmap_file
[2026-01-13 18:56:47] -rw-r--r--. 1 boincer umatlas     22343 Jan 13 18:56 stderr.txt
[2026-01-13 18:56:47] HITS file was successfully produced:
[2026-01-13 18:56:47] -rw-------. 1 boincer umatlas 145853041 Jan 13 18:54 shared/HITS.pool.root.1
[2026-01-13 18:56:47]  *** Contents of shared directory: ***
[2026-01-13 18:56:47] total 729636
[2026-01-13 18:56:47] -rw-r--r--. 2 boincer umatlas 599715919 Jan 13 17:42 ATLAS.root_0
[2026-01-13 18:56:47] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 17:42 start_atlas.sh
[2026-01-13 18:56:47] -rw-r--r--. 2 boincer umatlas    592389 Jan 13 17:42 input.tar.gz
[2026-01-13 18:56:47] -rw-------. 1 boincer umatlas 145853041 Jan 13 18:54 HITS.pool.root.1
[2026-01-13 18:56:47] -rw-------. 1 boincer umatlas    952320 Jan 13 18:56 result.tar.gz
18:56:49 (640585): run_atlas exited; CPU time 18995.405678
18:56:49 (640585): called boinc_finish(0)

</stderr_txt>
]]>

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