Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:33:56 (580765): wrapper (7.7.26015): starting
17:33:56 (580765): wrapper: running run_atlas (--nthreads 8)
[2026-01-13 17:33:56] Arguments: --nthreads 8
[2026-01-13 17:33:56] Threads: 8
[2026-01-13 17:33:56] Checking for CVMFS
[2026-01-13 17:33:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-13 17:33:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-13 17:33:57] Running cvmfs_config stat atlas.cern.ch
[2026-01-13 17:33:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-13 17:33:58] 2.13.3.0 7236 29244 171980 155107 2 433 21956177 40960000 22523 16776704 0 47561768 99.739 30173896 39125 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-13 17:33:58] CVMFS is ok
[2026-01-13 17:33:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 17:33:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 17:33:58] Further information can be found at the LHC@home message board.
[2026-01-13 17:33:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 17:33:58] Checking for apptainer binary...
[2026-01-13 17:33:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-13 17:33:58] Running /usr/bin/apptainer --version
[2026-01-13 17:33:58] apptainer version 1.4.5-2.el9
[2026-01-13 17:33:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 17:33:58] c-212-11.aglt2.org
[2026-01-13 17:33:58] apptainer works
[2026-01-13 17:33:58] Set ATHENA_PROC_NUMBER=8
[2026-01-13 17:33:58] Set ATHENA_CORE_NUMBER=8
[2026-01-13 17:33:58] Starting ATLAS job with PandaID=6969256204
[2026-01-13 17:33:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 18:57:41]  *** The last 200 lines of the pilot log: ***
[2026-01-13 18:57:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/76/6e/log.48215263._000562.job.log.tgz.1
[2026-01-13 18:57:41]  workdir=None
[2026-01-13 18:57:41] ]
[2026-01-13 18:57:41] 2026-01-13 23:56:52,938 | INFO     | transferring file log.48215263._000562.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6969256204/log.48215263._000562.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-13 18:57:41] 2026-01-13 23:56:52,938 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6969256204/log.48215263._000562.job.log.tgz.1 /tmp/boinchome/slots/3/log.48215263._000562.job
[2026-01-13 18:57:41] 2026-01-13 23:56:52,962 | INFO     | adding to output.list: log.48215263._000562.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/76/6e/log.48215263._000562.job.log.tg
[2026-01-13 18:57:41] 2026-01-13 23:56:52,963 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-13 18:57:41] 2026-01-13 23:56:52,963 | INFO     | summary of transferred files:
[2026-01-13 18:57:41] 2026-01-13 23:56:52,963 | INFO     |  -- lfn=log.48215263._000562.job.log.tgz.1, status_code=0, status=transferred
[2026-01-13 18:57:41] 2026-01-13 23:56:52,963 | INFO     | stage-out finished correctly
[2026-01-13 18:57:41] 2026-01-13 23:56:53,046 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-13 18:57:41] 2026-01-13 23:56:53,118 | INFO     | time since job start (4947s) is within the limit (349056.0s)
[2026-01-13 18:57:41] 2026-01-13 23:56:53,213 | INFO     | job 6969256204 has state=finished
[2026-01-13 18:57:41] 2026-01-13 23:56:53,213 | INFO     | preparing for final server update for job 6969256204 in state='finished'
[2026-01-13 18:57:41] 2026-01-13 23:56:53,214 | INFO     | this job has now completed (state=finished)
[2026-01-13 18:57:41] 2026-01-13 23:56:53,214 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-13 18:57:41] 2026-01-13 23:56:53,214 | INFO     | log transfer has been attempted: DONE
[2026-01-13 18:57:41] 2026-01-13 23:56:53,214 | INFO     | job 6969256204 has finished - writing final server update
[2026-01-13 18:57:41] 2026-01-13 23:56:53,214 | INFO     | total number of processed events: 400 (read)
[2026-01-13 18:57:41] 2026-01-13 23:56:53,215 | INFO     | executing command: lscpu
[2026-01-13 18:57:41] 2026-01-13 23:56:53,297 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-13 18:57:41] 2026-01-13 23:56:54,695 | WARNING  | process 592562 can no longer be monitored (due to stat problems) - aborting
[2026-01-13 18:57:41] 2026-01-13 23:56:54,695 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6969256204/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 18:57:41] 2026-01-13 23:56:55,128 | INFO     | time since job start (4949s) is within the limit (349056.0s)
[2026-01-13 18:57:41] 2026-01-13 23:56:56,013 | INFO     | number of running child processes to parent process 592562: 1
[2026-01-13 18:57:41] 2026-01-13 23:56:56,013 | INFO     | maximum number of monitored processes: 6
[2026-01-13 18:57:41] 2026-01-13 23:56:57,136 | INFO     | time since job start (4951s) is within the limit (349056.0s)
[2026-01-13 18:57:41] 2026-01-13 23:56:58,517 | INFO     | monitor loop #329: job 0:6969256204 is in state 'finished'
[2026-01-13 18:57:41] 2026-01-13 23:56:58,517 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 18:57:41] 2026-01-13 23:56:59,526 | INFO     | PID=585732 has CPU usage=12.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 18:57:41] 2026-01-13 23:56:59,527 | INFO     | .. there are 18 such processes running
[2026-01-13 18:57:41] 2026-01-13 23:57:00,527 | INFO     | time since job start (4954s) is within the limit (349056.0s)
[2026-01-13 18:57:41] 2026-01-13 23:57:01,030 | INFO     | monitor loop #330: job 0:6969256204 is in state 'finished'
[2026-01-13 18:57:41] 2026-01-13 23:57:01,031 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 18:57:41] 2026-01-13 23:57:02,535 | INFO     | time since job start (4956s) is within the limit (349056.0s)
[2026-01-13 18:57:41] 2026-01-13 23:57:03,536 | INFO     | monitor loop #331: job 0:6969256204 is in state 'finished'
[2026-01-13 18:57:41] 2026-01-13 23:57:03,537 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 18:57:41] 2026-01-13 23:57:04,543 | INFO     | time since job start (4958s) is within the limit (349056.0s)
[2026-01-13 18:57:41] 2026-01-13 23:57:04,908 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-13 18:57:41] 2026-01-13 23:57:04,925 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3230.2932812500017
[2026-01-13 18:57:41] 2026-01-13 23:57:04,956 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6969256204/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 18:57:41] 2026-01-13 23:57:04,957 | INFO     | extracted standard info from prmon json
[2026-01-13 18:57:41] 2026-01-13 23:57:04,957 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 18:57:41] 2026-01-13 23:57:04,957 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 18:57:41] 2026-01-13 23:57:04,957 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 18:57:41] 2026-01-13 23:57:04,957 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 18:57:41] 2026-01-13 23:57:04,959 | INFO     | fitting pss+swap vs Time
[2026-01-13 18:57:41] 2026-01-13 23:57:04,963 | INFO     | sum of square deviations: 125638870.16216213
[2026-01-13 18:57:41] 2026-01-13 23:57:04,964 | INFO     | sum of deviations: -1777053155.9459465
[2026-01-13 18:57:41] 2026-01-13 23:57:04,964 | INFO     | mean x: 1768346234.5675676
[2026-01-13 18:57:41] 2026-01-13 23:57:04,964 | INFO     | mean y: 2591855.189189189
[2026-01-13 18:57:41] 2026-01-13 23:57:04,964 | INFO     | intersect: 25014319936.534332
[2026-01-13 18:57:41] 2026-01-13 23:57:04,964 | INFO     | chi2: 0.004602430085276102
[2026-01-13 18:57:41] 2026-01-13 23:57:04,964 | INFO     | current memory leak: -14.14 B/s (using 74 data points, chi2=0.00)
[2026-01-13 18:57:41] 2026-01-13 23:57:04,964 | INFO     | could have reported an average CPU frequency of 3191 MHz (6 samples)
[2026-01-13 18:57:41] 2026-01-13 23:57:04,965 | INFO     | ..............................
[2026-01-13 18:57:41] 2026-01-13 23:57:04,965 | INFO     | . Timing measurements:
[2026-01-13 18:57:41] 2026-01-13 23:57:04,965 | INFO     | . get job = 0 s
[2026-01-13 18:57:41] 2026-01-13 23:57:04,965 | INFO     | . initial setup = 2 s
[2026-01-13 18:57:41] 2026-01-13 23:57:04,965 | INFO     | . payload setup = 9 s
[2026-01-13 18:57:41] 2026-01-13 23:57:04,965 | INFO     | . stage-in = 0 s
[2026-01-13 18:57:41] 2026-01-13 23:57:04,965 | INFO     | . payload execution = 4912 s
[2026-01-13 18:57:41] 2026-01-13 23:57:04,965 | INFO     | . stage-out = 1 s
[2026-01-13 18:57:41] 2026-01-13 23:57:04,965 | INFO     | . log creation = 0 s
[2026-01-13 18:57:41] 2026-01-13 23:57:04,965 | INFO     | ..............................
[2026-01-13 18:57:41] 2026-01-13 23:57:05,256 | INFO     | 
[2026-01-13 18:57:41] 2026-01-13 23:57:05,257 | INFO     | job summary report
[2026-01-13 18:57:41] 2026-01-13 23:57:05,257 | INFO     | --------------------------------------------------
[2026-01-13 18:57:41] 2026-01-13 23:57:05,257 | INFO     | PanDA job id: 6969256204
[2026-01-13 18:57:41] 2026-01-13 23:57:05,257 | INFO     | task id: 48215263
[2026-01-13 18:57:41] 2026-01-13 23:57:05,257 | INFO     | errors: (none)
[2026-01-13 18:57:41] 2026-01-13 23:57:05,257 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 18:57:41] 2026-01-13 23:57:05,257 | INFO     | pilot state: finished 
[2026-01-13 18:57:41] 2026-01-13 23:57:05,257 | INFO     | transexitcode: 0
[2026-01-13 18:57:41] 2026-01-13 23:57:05,257 | INFO     | exeerrorcode: 0
[2026-01-13 18:57:41] 2026-01-13 23:57:05,258 | INFO     | exeerrordiag: 
[2026-01-13 18:57:41] 2026-01-13 23:57:05,258 | INFO     | exitcode: 0
[2026-01-13 18:57:41] 2026-01-13 23:57:05,258 | INFO     | exitmsg: OK
[2026-01-13 18:57:41] 2026-01-13 23:57:05,258 | INFO     | cpuconsumptiontime: 19818 s
[2026-01-13 18:57:41] 2026-01-13 23:57:05,258 | INFO     | nevents: 400
[2026-01-13 18:57:41] 2026-01-13 23:57:05,258 | INFO     | neventsw: 0
[2026-01-13 18:57:41] 2026-01-13 23:57:05,258 | INFO     | pid: 592562
[2026-01-13 18:57:41] 2026-01-13 23:57:05,258 | INFO     | pgrp: 592562
[2026-01-13 18:57:41] 2026-01-13 23:57:05,258 | INFO     | corecount: 8
[2026-01-13 18:57:41] 2026-01-13 23:57:05,258 | INFO     | event service: False
[2026-01-13 18:57:41] 2026-01-13 23:57:05,258 | INFO     | sizes: {0: 2283767, 1: 2283966, 9: 2284228, 11: 2284256, 4926: 2310470, 4928: 2319652, 4940: 2319790}
[2026-01-13 18:57:41] 2026-01-13 23:57:05,258 | INFO     | --------------------------------------------------
[2026-01-13 18:57:41] 2026-01-13 23:57:05,258 | INFO     | 
[2026-01-13 18:57:41] 2026-01-13 23:57:05,259 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-13 18:57:41] 2026-01-13 23:57:05,356 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 18:57:41] 2026-01-13 23:57:05,356 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 18:57:41] 2026-01-13 23:57:05,356 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 18:57:41] 2026-01-13 23:57:05,356 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 18:57:41] 2026-01-13 23:57:05,356 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 18:57:41] 2026-01-13 23:57:05,356 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 18:57:41] 2026-01-13 23:57:05,356 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 18:57:41] 2026-01-13 23:57:05,356 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 18:57:41] 2026-01-13 23:57:05,357 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 18:57:41] 2026-01-13 23:57:05,357 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 18:57:41] 2026-01-13 23:57:05,357 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 18:57:41] 2026-01-13 23:57:05,357 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 18:57:41] 2026-01-13 23:57:05,357 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 18:57:41] 2026-01-13 23:57:05,357 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 18:57:41] 2026-01-13 23:57:05,357 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 18:57:41] 2026-01-13 23:57:05,357 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 18:57:41] 2026-01-13 23:57:05,357 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 18:57:41] 2026-01-13 23:57:05,357 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 18:57:41] 2026-01-13 23:57:05,357 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 18:57:41] 2026-01-13 23:57:05,357 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 18:57:41] 2026-01-13 23:57:05,357 | INFO     | job 6969256204 has completed (purged errors)
[2026-01-13 18:57:41] 2026-01-13 23:57:05,358 | INFO     | overall cleanup function is called
[2026-01-13 18:57:41] 2026-01-13 23:57:06,366 | INFO     | --- collectZombieJob: --- 10, [592562]
[2026-01-13 18:57:41] 2026-01-13 23:57:06,366 | INFO     | zombie collector waiting for pid 592562
[2026-01-13 18:57:41] 2026-01-13 23:57:06,367 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 18:57:41] 2026-01-13 23:57:06,367 | INFO     | collected zombie processes
[2026-01-13 18:57:41] 2026-01-13 23:57:06,367 | INFO     | will attempt to kill all subprocesses of pid=592562
[2026-01-13 18:57:41] 2026-01-13 23:57:07,080 | INFO     | process IDs to be killed: [592562] (in reverse order)
[2026-01-13 18:57:41] 2026-01-13 23:57:07,261 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 18:57:41] 2026-01-13 23:57:07,263 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 18:57:41] 2026-01-13 23:57:07,279 | INFO     | did not find any defunct processes belonging to 592562
[2026-01-13 18:57:41] 2026-01-13 23:57:07,292 | INFO     | did not find any defunct processes belonging to 592562
[2026-01-13 18:57:41] 2026-01-13 23:57:07,292 | INFO     | ready for new job
[2026-01-13 18:57:41] 2026-01-13 23:57:07,292 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 18:57:41] 2026-01-13 23:57:07,294 | INFO     | ***************************************
[2026-01-13 18:57:41] 2026-01-13 23:57:07,294 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 18:57:41] 2026-01-13 23:57:07,294 | INFO     | ***************************************
[2026-01-13 18:57:41] 2026-01-13 23:57:07,294 | INFO     | 
[2026-01-13 18:57:41] 2026-01-13 23:57:07,299 | INFO     | architecture information:
[2026-01-13 18:57:41] 2026-01-13 23:57:07,299 | INFO     | executing command: cat /etc/os-release
[2026-01-13 18:57:41] 2026-01-13 23:57:07,343 | INFO     | cat /etc/os-release:
[2026-01-13 18:57:41] NAME="CentOS Linux"
[2026-01-13 18:57:41] VERSION="7 (Core)"
[2026-01-13 18:57:41] ID="centos"
[2026-01-13 18:57:41] ID_LIKE="rhel fedora"
[2026-01-13 18:57:41] VERSION_ID="7"
[2026-01-13 18:57:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 18:57:41] ANSI_COLOR="0;31"
[2026-01-13 18:57:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 18:57:41] HOME_URL="https://www.centos.org/"
[2026-01-13 18:57:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 18:57:41] 
[2026-01-13 18:57:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 18:57:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 18:57:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 18:57:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 18:57:41] 
[2026-01-13 18:57:41] 2026-01-13 23:57:07,344 | INFO     | ***************************************
[2026-01-13 18:57:41] 2026-01-13 23:57:07,856 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-13 18:57:41] 2026-01-13 23:57:07,908 | INFO     | sufficient remaining disk space (120542199808 B)
[2026-01-13 18:57:41] 2026-01-13 23:57:07,908 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 18:57:41] 2026-01-13 23:57:07,908 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 18:57:41] 2026-01-13 23:57:07,908 | INFO     | update_server=False
[2026-01-13 18:57:41] 2026-01-13 23:57:07,908 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 18:57:41] 2026-01-13 23:57:07,909 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 18:57:41] 2026-01-13 23:57:07,910 | INFO     | aborting loop
[2026-01-13 18:57:41] 2026-01-13 23:57:07,940 | INFO     | all payload control threads have been joined
[2026-01-13 18:57:41] 2026-01-13 23:57:07,941 | INFO     | all job control threads have been joined
[2026-01-13 18:57:41] 2026-01-13 23:57:08,125 | INFO     | all data control threads have been joined
[2026-01-13 18:57:41] 2026-01-13 23:57:08,195 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 18:57:41] 2026-01-13 23:57:08,636 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 18:57:41] 2026-01-13 23:57:08,913 | INFO     | [job] retrieve thread has finished
[2026-01-13 18:57:41] 2026-01-13 23:57:08,915 | INFO     | [job] job monitor thread has finished
[2026-01-13 18:57:41] 2026-01-13 23:57:08,947 | INFO     | [job] control thread has finished
[2026-01-13 18:57:41] 2026-01-13 23:57:08,947 | INFO     | [payload] control thread has finished
[2026-01-13 18:57:41] 2026-01-13 23:57:09,124 | INFO     | [data] copytool_in thread has finished
[2026-01-13 18:57:41] 2026-01-13 23:57:09,131 | INFO     | [data] control thread has finished
[2026-01-13 18:57:41] 2026-01-13 23:57:09,168 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 18:57:41] 2026-01-13 23:57:09,310 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 18:57:41] 2026-01-13 23:57:09,439 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 18:57:41] 2026-01-13 23:57:09,459 | INFO     | [job] validate thread has finished
[2026-01-13 18:57:41] 2026-01-13 23:57:09,506 | INFO     | [payload] validate_post thread has finished
[2026-01-13 18:57:41] 2026-01-13 23:57:09,848 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 18:57:41] 2026-01-13 23:57:10,115 | INFO     | [payload] failed_post thread has finished
[2026-01-13 18:57:41] 2026-01-13 23:57:10,278 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 18:57:41] 2026-01-13 23:57:10,643 | INFO     | [data] copytool_out thread has finished
[2026-01-13 18:57:41] 2026-01-13 23:57:11,284 | INFO     | [job] queue monitor thread has finished
[2026-01-13 18:57:41] 2026-01-13 23:57:12,204 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 18:57:41] 2026-01-13 23:57:34,588 | INFO     | [monitor] cgroup control has ended
[2026-01-13 18:57:41] 2026-01-13 23:57:35,506 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139889072056128)>', '<ExcThread(monitor, started 139888527652608)>']
[2026-01-13 18:57:41] 2026-01-13 23:57:38,296 | INFO     | PID=585732 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-13 18:57:41] 2026-01-13 23:57:38,296 | INFO     | .. there are 19 such processes running
[2026-01-13 18:57:41] 2026-01-13 23:57:38,297 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 18:57:41] 2026-01-13 23:57:38,297 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 18:57:41] 2026-01-13 23:57:38,297 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 18:57:41] 2026-01-13 23:57:38,297 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 18:57:41] 2026-01-13 23:57:38,297 | INFO     | [monitor] control thread has ended
[2026-01-13 18:57:41] 2026-01-13 23:57:40,533 | INFO     | all workflow threads have been joined
[2026-01-13 18:57:41] 2026-01-13 23:57:40,534 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 18:57:41] 2026-01-13 23:57:40,534 | INFO     | traces error code: 0
[2026-01-13 18:57:41] 2026-01-13 23:57:40,534 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 18:57:41] 2026-01-13 23:57:40,858 [wrapper] ==== pilot stdout END ====
[2026-01-13 18:57:41] 2026-01-13 23:57:40,875 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 18:57:41] 2026-01-13 23:57:40,887 [wrapper] pilotpid: 585732
[2026-01-13 18:57:41] 2026-01-13 23:57:40,897 [wrapper] Pilot exit status: 0
[2026-01-13 18:57:41] 2026-01-13 23:57:40,934 [wrapper] pandaids: 6969256204
[2026-01-13 18:57:41] 2026-01-13 23:57:41,109 [wrapper] cleanup supervisor_pilot  949805 585733
[2026-01-13 18:57:41] 2026-01-13 23:57:41,126 [wrapper] Test setup, not cleaning
[2026-01-13 18:57:41] 2026-01-13 23:57:41,153 [wrapper] apfmon messages muted
[2026-01-13 18:57:41] 2026-01-13 23:57:41,169 [wrapper] ==== wrapper stdout END ====
[2026-01-13 18:57:41] 2026-01-13 23:57:41,184 [wrapper] ==== wrapper stderr END ====
[2026-01-13 18:57:41]  *** Error codes and diagnostics ***
[2026-01-13 18:57:41]     "exeErrorCode": 0,
[2026-01-13 18:57:41]     "exeErrorDiag": "",
[2026-01-13 18:57:41]     "pilotErrorCode": 0,
[2026-01-13 18:57:41]     "pilotErrorDiag": "",
[2026-01-13 18:57:41]  *** Listing of results directory ***
[2026-01-13 18:57:41] total 733904
[2026-01-13 18:57:41] -rw-r--r--. 1 boincer umatlas    579449 Jan 13 16:45 pilot3.tar.gz
[2026-01-13 18:57:41] -rwx------. 1 boincer umatlas     36322 Jan 13 16:45 runpilot2-wrapper.sh
[2026-01-13 18:57:41] -rw-r--r--. 1 boincer umatlas      5112 Jan 13 16:47 queuedata.json
[2026-01-13 18:57:41] -rw-r--r--. 1 boincer umatlas       100 Jan 13 17:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 18:57:41] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 13 17:33 run_atlas
[2026-01-13 18:57:41] -rw-r--r--. 1 boincer umatlas       105 Jan 13 17:33 job.xml
[2026-01-13 18:57:41] -rw-r--r--. 2 boincer umatlas 594454675 Jan 13 17:33 EVNT.32794306._000023.pool.root.1
[2026-01-13 18:57:41] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 17:33 start_atlas.sh
[2026-01-13 18:57:41] drwxrwx--x. 2 boincer umatlas      4096 Jan 13 17:33 shared
[2026-01-13 18:57:41] -rw-r--r--. 2 boincer umatlas    592390 Jan 13 17:33 input.tar.gz
[2026-01-13 18:57:41] -rw-r--r--. 1 boincer umatlas         0 Jan 13 17:33 boinc_lockfile
[2026-01-13 18:57:41] -rw-r--r--. 1 boincer umatlas      2501 Jan 13 17:33 pandaJob.out
[2026-01-13 18:57:41] -rw-------. 1 boincer umatlas        57 Jan 13 17:33 setup.sh.local
[2026-01-13 18:57:41] -rw-------. 1 boincer umatlas    997226 Jan 13 17:34 agis_schedconf.cvmfs.json
[2026-01-13 18:57:41] -rw-------. 1 boincer umatlas   1516246 Jan 13 17:34 agis_ddmendpoints.agis.ALL.json
[2026-01-13 18:57:41] drwx------. 5 boincer umatlas      4096 Jan 13 17:34 pilot3
[2026-01-13 18:57:41] -rw-r--r--. 1 boincer umatlas      6956 Jan 13 18:55 init_data.xml
[2026-01-13 18:57:41] -rw-------. 1 boincer umatlas 151104814 Jan 13 18:56 HITS.48215263._000562.pool.root.1
[2026-01-13 18:57:41] -rw-r--r--. 1 boincer umatlas       530 Jan 13 18:56 boinc_task_state.xml
[2026-01-13 18:57:41] -rw-------. 1 boincer umatlas      1033 Jan 13 18:56 memory_monitor_summary.json
[2026-01-13 18:57:41] -rw-------. 1 boincer umatlas    326196 Jan 13 18:56 log.48215263._000562.job.log.tgz.1
[2026-01-13 18:57:41] -rw-------. 1 boincer umatlas        95 Jan 13 18:56 pilot_heartbeat.json
[2026-01-13 18:57:41] -rw-------. 1 boincer umatlas      7765 Jan 13 18:57 heartbeat.json
[2026-01-13 18:57:41] -rw-------. 1 boincer umatlas      4824 Jan 13 18:57 pilotlog.txt
[2026-01-13 18:57:41] -rw-r--r--. 1 boincer umatlas        27 Jan 13 18:57 wrapper_checkpoint.txt
[2026-01-13 18:57:41] -rw-r--r--. 1 boincer umatlas      8192 Jan 13 18:57 boinc_mmap_file
[2026-01-13 18:57:41] -rw-------. 1 boincer umatlas    690951 Jan 13 18:57 log.48215263._000562.job.log.1
[2026-01-13 18:57:41] -rw-------. 1 boincer umatlas       357 Jan 13 18:57 output.list
[2026-01-13 18:57:41] -rw-r--r--. 1 boincer umatlas       620 Jan 13 18:57 runtime_log
[2026-01-13 18:57:41] -rw-------. 1 boincer umatlas   1034240 Jan 13 18:57 result.tar.gz
[2026-01-13 18:57:41] -rw-------. 1 boincer umatlas       652 Jan 13 18:57 qMaLDmDO1z8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmaOoKDmILV7jm.diag
[2026-01-13 18:57:41] -rw-r--r--. 1 boincer umatlas      9342 Jan 13 18:57 runtime_log.err
[2026-01-13 18:57:41] -rw-r--r--. 1 boincer umatlas     22453 Jan 13 18:57 stderr.txt
[2026-01-13 18:57:41] HITS file was successfully produced:
[2026-01-13 18:57:41] -rw-------. 1 boincer umatlas 151104814 Jan 13 18:56 shared/HITS.pool.root.1
[2026-01-13 18:57:41]  *** Contents of shared directory: ***
[2026-01-13 18:57:41] total 729704
[2026-01-13 18:57:41] -rw-r--r--. 2 boincer umatlas 594454675 Jan 13 17:33 ATLAS.root_0
[2026-01-13 18:57:41] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 17:33 start_atlas.sh
[2026-01-13 18:57:41] -rw-r--r--. 2 boincer umatlas    592390 Jan 13 17:33 input.tar.gz
[2026-01-13 18:57:41] -rw-------. 1 boincer umatlas 151104814 Jan 13 18:56 HITS.pool.root.1
[2026-01-13 18:57:41] -rw-------. 1 boincer umatlas   1034240 Jan 13 18:57 result.tar.gz
18:57:42 (580765): run_atlas exited; CPU time 19943.802537
18:57:42 (580765): called boinc_finish(0)

</stderr_txt>
]]>

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