Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-14 05:40:29 (9460): vboxwrapper version 26210
2026-01-14 05:40:29 (9460): BOINC client version: 8.2.8
2026-01-14 05:40:30 (9460): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2026-01-14 05:40:30 (9460): Successfully copied 'init_data.xml' to the shared directory.
2026-01-14 05:40:30 (9460): Create VM. (boinc_a4108648812c1ac4, slot#2)
2026-01-14 05:40:31 (9460): Setting Memory Size for VM. (4800MB)
2026-01-14 05:40:31 (9460): Setting CPU Count for VM. (8)
2026-01-14 05:40:31 (9460): Setting Chipset Options for VM.
2026-01-14 05:40:32 (9460): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-14 05:40:32 (9460): Setting Boot Options for VM.
2026-01-14 05:40:32 (9460): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-14 05:40:33 (9460): Enabling VM Network Access.
2026-01-14 05:40:33 (9460): Disabling USB Support for VM.
2026-01-14 05:40:33 (9460): Disabling COM Port Support for VM.
2026-01-14 05:40:33 (9460): Disabling LPT Port Support for VM.
2026-01-14 05:40:34 (9460): Disabling Audio Support for VM.
2026-01-14 05:40:34 (9460): Disabling Clipboard Support for VM.
2026-01-14 05:40:34 (9460): Disabling Drag and Drop Support for VM.
2026-01-14 05:40:34 (9460): Adding storage controller(s) to VM.
2026-01-14 05:40:35 (9460): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-14 05:40:37 (9460): Adding VirtualBox Guest Additions to VM.
2026-01-14 05:40:37 (9460): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-14 05:40:37 (9460): forwarding host port 63394 to guest port 80
2026-01-14 05:40:37 (9460): Enabling remote desktop for VM.
2026-01-14 05:40:38 (9460): Required extension pack not installed, remote desktop not enabled.
2026-01-14 05:40:38 (9460): Enabling shared directory for VM.
2026-01-14 05:40:38 (9460): Starting VM using VBoxManage interface. (boinc_a4108648812c1ac4, slot#2)
2026-01-14 05:40:44 (9460): Successfully started VM. (PID = '14440')
2026-01-14 05:40:44 (9460): Reporting VM Process ID to BOINC.
2026-01-14 05:40:44 (9460): Guest Log: BIOS: VirtualBox 7.2.4
2026-01-14 05:40:44 (9460): Guest Log: CPUID EDX: 0x178bfbff
2026-01-14 05:40:44 (9460): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-14 05:40:44 (9460): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-14 05:40:44 (9460): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-14 05:40:44 (9460): Detected: Web Application Enabled (http://localhost:63394)
2026-01-14 05:40:44 (9460): Preference change detected
2026-01-14 05:40:44 (9460): Setting CPU throttle for VM. (100%)
2026-01-14 05:40:44 (9460): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-14 05:40:46 (9460): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-14 05:40:46 (9460): Guest Log: BIOS: Booting from Hard Disk...
2026-01-14 05:40:48 (9460): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-14 05:40:48 (9460): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-14 05:40:48 (9460): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-14 05:40:48 (9460): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-14 05:40:48 (9460): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-14 05:40:48 (9460): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-14 05:40:48 (9460): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-14 05:40:48 (9460): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-14 05:40:48 (9460): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-14 05:40:48 (9460): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-14 05:40:48 (9460): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-14 05:40:48 (9460): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-14 05:40:48 (9460): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-14 05:40:48 (9460): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-14 05:40:48 (9460): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-14 05:40:48 (9460): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-14 05:40:48 (9460): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-14 05:40:48 (9460): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-14 05:40:48 (9460): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-14 05:40:48 (9460): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-14 05:40:48 (9460): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-14 05:40:48 (9460): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-14 05:40:48 (9460): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-14 05:40:48 (9460): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-14 05:40:48 (9460): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-14 05:40:48 (9460): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-14 05:40:48 (9460): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-14 05:40:48 (9460): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-14 05:40:48 (9460): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-14 05:40:48 (9460): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-14 05:40:48 (9460): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-14 05:40:48 (9460): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-14 05:40:55 (9460): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-14 05:40:55 (9460): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-14 05:41:00 (9460): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-14 05:41:00 (9460): Guest Log: 00:00:00.000125 main     Log opened 2026-01-14T05:40:58.123395000Z
2026-01-14 05:41:00 (9460): Guest Log: 00:00:00.000206 main     OS Product: Linux
2026-01-14 05:41:00 (9460): Guest Log: 00:00:00.000235 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-14 05:41:00 (9460): Guest Log: 00:00:00.000284 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-14 05:41:00 (9460): Guest Log: 00:00:00.000313 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-14 05:41:00 (9460): Guest Log: 00:00:00.000314 main     Process ID: 1371
2026-01-14 05:41:00 (9460): Guest Log: 00:00:00.000314 main     Package type: LINUX_64BITS_GENERIC
2026-01-14 05:41:00 (9460): Guest Log: 00:00:00.001306 main     5.2.32 r132073 started. Verbose level = 0
2026-01-14 05:41:00 (9460): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-14 05:41:00 (9460): Guest Log: [INFO] Mounting shared directory
2026-01-14 05:41:00 (9460): Guest Log: [INFO] Checking for init_data.xml
2026-01-14 05:41:06 (9460): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-14 05:41:06 (9460): Guest Log: [INFO] Detected branch: prod
2026-01-14 05:41:07 (9460): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-14 05:41:07 (9460): Guest Log: Copying input files
2026-01-14 05:41:09 (9460): Guest Log: Copied input files into RunAtlas.
2026-01-14 05:41:09 (9460): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-14 05:41:09 (9460): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-14 05:41:09 (9460): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-14 05:41:09 (9460): Guest Log: Further information can be found at the LHC@home message board.
2026-01-14 05:41:10 (9460): Guest Log: 00:00:10.004266 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 591 747 000ns (GuestNow=1 768 365 669 533 875 000 ns GuestLast=1 768 369 258 125 622 000 ns fSetTimeLastLoop=true )
2026-01-14 05:41:17 (9460): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-14 05:41:17 (9460): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-14 05:41:17 (9460): Guest Log: 2.6.3.0 1668 0 30204 155118 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-01-14 05:41:18 (9460): Guest Log: copied the webapp to /var/www
2026-01-14 05:41:18 (9460): Guest Log: ATHENA_PROC_NUMBER=8
2026-01-14 05:41:18 (9460): Guest Log: ATHENA_CORE_NUMBER=8
2026-01-14 05:41:18 (9460): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-14 05:41:18 (9460): Guest Log:  *** Starting ATLAS job. (PandaID=6969258424 taskID=48215263) ***
2026-01-14 06:42:01 (9460): Guest Log:  *** Job finished ***
2026-01-14 06:42:01 (9460): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-14 06:42:01 (9460): Guest Log: 2026-01-14 05:41:24,441 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-14 06:42:01 (9460): Guest Log: 2026-01-14 05:41:48,131 [wrapper] supervise_pilot (15 min periods counter: 5)
2026-01-14 06:42:01 (9460): Guest Log: 2026-01-14 05:41:53,462 | INFO     | [monitor] cgroup control has ended
2026-01-14 06:42:01 (9460): Guest Log: 2026-01-14 05:41:53,998 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139893430429504)>', '<ExcThread(monitor, started 139892688402176)>']
2026-01-14 06:42:01 (9460): Guest Log: 2026-01-14 05:41:54,776 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-14 06:42:01 (9460): Guest Log: 2026-01-14 05:41:54,777 | INFO     | [monitor] control thread has ended
2026-01-14 06:42:01 (9460): Guest Log: 2026-01-14 05:41:59,003 | INFO     | all workflow threads have been joined
2026-01-14 06:42:01 (9460): Guest Log: 2026-01-14 05:41:59,003 | INFO     | end of generic workflow (traces error code: 0)
2026-01-14 06:42:01 (9460): Guest Log: 2026-01-14 05:41:59,003 | INFO     | traces error code: 0
2026-01-14 06:42:01 (9460): Guest Log: 2026-01-14 05:41:59,003 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-14 06:42:01 (9460): Guest Log: 2026-01-14 05:41:59,056 [wrapper] ==== pilot stdout END ====
2026-01-14 06:42:01 (9460): Guest Log: 2026-01-14 05:41:59,060 [wrapper] ==== wrapper stdout RESUME ====
2026-01-14 06:42:01 (9460): Guest Log: 2026-01-14 05:41:59,064 [wrapper] pilotpid: 6088
2026-01-14 06:42:01 (9460): Guest Log: 2026-01-14 05:41:59,068 [wrapper] Pilot exit status: 0
2026-01-14 06:42:01 (9460): Guest Log: 2026-01-14 05:41:59,120 [wrapper] pandaids: 6969258424
2026-01-14 06:42:01 (9460): Guest Log: 2026-01-14 05:41:59,143 [wrapper] cleanup supervisor_pilot 23889 6089
2026-01-14 06:42:01 (9460): Guest Log: 2026-01-14 05:41:59,150 [wrapper] Test setup, not cleaning
2026-01-14 06:42:01 (9460): Guest Log: 2026-01-14 05:41:59,156 [wrapper] apfmon messages muted
2026-01-14 06:42:01 (9460): Guest Log: 2026-01-14 05:41:59,159 [wrapper] ==== wrapper stdout END ====
2026-01-14 06:42:01 (9460): Guest Log: 2026-01-14 05:41:59,162 [wrapper] ==== wrapper stderr END ====
2026-01-14 06:42:01 (9460): Guest Log:  *** Error codes and diagnostics ***
2026-01-14 06:42:01 (9460): Guest Log:     "exeErrorCode": 0,
2026-01-14 06:42:01 (9460): Guest Log:     "exeErrorDiag": "",
2026-01-14 06:42:01 (9460): Guest Log:     "pilotErrorCode": 0,
2026-01-14 06:42:01 (9460): Guest Log:     "pilotErrorDiag": "",
2026-01-14 06:42:01 (9460): Guest Log:  *** Listing of results directory ***
2026-01-14 06:42:01 (9460): Guest Log: total 158428
2026-01-14 06:42:01 (9460): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Jan 13 21:10 pilot3.tar.gz
2026-01-14 06:42:01 (9460): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jan 13 21:42 queuedata.json
2026-01-14 06:42:01 (9460): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 13 21:43 runpilot2-wrapper.sh
2026-01-14 06:42:01 (9460): Guest Log: -rwxr-xr-x. 1 atlas atlas      8586 Jan 14 04:41 init_data.xml
2026-01-14 06:42:01 (9460): Guest Log: -rwxr-xr-x. 1 atlas atlas    592391 Jan 14 04:41 input.tar.gz
2026-01-14 06:42:01 (9460): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Jan 14 04:41 start_atlas.sh
2026-01-14 06:42:01 (9460): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 14 04:41 EVNT.32794306._000069.pool.root.1 -> /data/./ATLAS.root_0
2026-01-14 06:42:01 (9460): Guest Log: -rw-r--r--. 1 atlas atlas      2500 Jan 14 04:41 pandaJob.out
2026-01-14 06:42:01 (9460): Guest Log: -rw-------. 1 atlas atlas    997226 Jan 14 04:41 agis_schedconf.cvmfs.json
2026-01-14 06:42:01 (9460): Guest Log: -rw-------. 1 atlas atlas   1516246 Jan 14 04:41 agis_ddmendpoints.agis.ALL.json
2026-01-14 06:42:01 (9460): Guest Log: drwx------. 5 atlas atlas      4096 Jan 14 04:41 pilot3
2026-01-14 06:42:01 (9460): Guest Log: -rw-------. 1 atlas atlas 156779623 Jan 14 05:40 HITS.48215263._001701.pool.root.1
2026-01-14 06:42:01 (9460): Guest Log: -rw-------. 1 atlas atlas      1033 Jan 14 05:40 memory_monitor_summary.json
2026-01-14 06:42:01 (9460): Guest Log: -rw-------. 1 atlas atlas    292212 Jan 14 05:40 log.48215263._001701.job.log.tgz.1
2026-01-14 06:42:01 (9460): Guest Log: -rw-------. 1 atlas atlas      7827 Jan 14 05:40 heartbeat.json
2026-01-14 06:42:01 (9460): Guest Log: -rw-------. 1 atlas atlas        95 Jan 14 05:41 pilot_heartbeat.json
2026-01-14 06:42:01 (9460): Guest Log: -rw-------. 1 atlas atlas      5392 Jan 14 05:41 pilotlog.txt
2026-01-14 06:42:01 (9460): Guest Log: -rw-------. 1 atlas atlas    506111 Jan 14 05:41 log.48215263._001701.job.log.1
2026-01-14 06:42:01 (9460): Guest Log: -rw-------. 1 atlas atlas       357 Jan 14 05:41 output.list
2026-01-14 06:42:01 (9460): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 14 05:41 runtime_log
2026-01-14 06:42:01 (9460): Guest Log: -rw-------. 1 atlas atlas    819200 Jan 14 05:41 result.tar.gz
2026-01-14 06:42:01 (9460): Guest Log: -rw-r--r--. 1 atlas atlas      8740 Jan 14 05:41 runtime_log.err
2026-01-14 06:42:01 (9460): Guest Log: -rw-------. 1 atlas atlas       650 Jan 14 05:41 onWNDmFM1z8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4JoKDmW8nW4n.diag
2026-01-14 06:42:01 (9460): Guest Log: Looking for outputfile HITS.48215263._001701.pool.root.1
2026-01-14 06:42:01 (9460): Guest Log: HITS file was successfully produced
2026-01-14 06:42:01 (9460): Guest Log: -rw-------. 1 atlas atlas 156779623 Jan 14 05:40 /home/atlas/RunAtlas/HITS.48215263._001701.pool.root.1
2026-01-14 06:42:02 (9460): Guest Log: Successfully finished the ATLAS job!
2026-01-14 06:42:02 (9460): Guest Log: Copying the results back to the shared directory!
2026-01-14 06:42:02 (9460): Guest Log:  *** Contents of shared directory: ***
2026-01-14 06:42:02 (9460): Guest Log: total 736960
2026-01-14 06:42:02 (9460): Guest Log: -rwxrwxrwx. 1 root root 596420029 Jan 14 04:40 ATLAS.root_0
2026-01-14 06:42:02 (9460): Guest Log: -rwxrwxrwx. 1 root root 156779623 Jan 14 05:42 HITS.pool.root.1
2026-01-14 06:42:02 (9460): Guest Log: -rwxrwxrwx. 1 root root      8586 Jan 14 04:40 init_data.xml
2026-01-14 06:42:02 (9460): Guest Log: -rwxrwxrwx. 1 root root    592391 Jan 13 22:04 input.tar.gz
2026-01-14 06:42:02 (9460): Guest Log: -rwxrwxrwx. 1 root root    819200 Jan 14 05:42 result.tar.gz
2026-01-14 06:42:02 (9460): Guest Log: -rwxrwxrwx. 1 root root     15847 Jan 13 22:04 start_atlas.sh
2026-01-14 06:42:02 (9460): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-14 06:42:02 (9460): VM Completion File Detected.
2026-01-14 06:42:02 (9460): Powering off VM.
2026-01-14 06:42:03 (9460): Successfully stopped VM.
2026-01-14 06:42:03 (9460): Deregistering VM. (boinc_a4108648812c1ac4, slot#2)
2026-01-14 06:42:03 (9460): Removing network bandwidth throttle group from VM.
2026-01-14 06:42:03 (9460): Removing VM from VirtualBox.
2026-01-14 06:42:08 (9460): called boinc_finish(0)

</stderr_txt>
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