Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:20:30 (530427): wrapper (7.7.26015): starting
17:20:30 (530427): wrapper: running run_atlas (--nthreads 8)
[2026-01-13 17:20:30] Arguments: --nthreads 8
[2026-01-13 17:20:30] Threads: 8
[2026-01-13 17:20:30] Checking for CVMFS
[2026-01-13 17:20:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-13 17:20:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-13 17:20:30] Running cvmfs_config stat atlas.cern.ch
[2026-01-13 17:20:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-13 17:20:31] 2.13.3.0 7236 29231 167280 155105 0 284 21923454 40960001 22505 16776704 0 47450047 99.738 30171116 39127 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-13 17:20:31] CVMFS is ok
[2026-01-13 17:20:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 17:20:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 17:20:31] Further information can be found at the LHC@home message board.
[2026-01-13 17:20:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 17:20:31] Checking for apptainer binary...
[2026-01-13 17:20:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-13 17:20:31] Running /usr/bin/apptainer --version
[2026-01-13 17:20:31] apptainer version 1.4.5-2.el9
[2026-01-13 17:20:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 17:20:31] c-212-11.aglt2.org
[2026-01-13 17:20:31] apptainer works
[2026-01-13 17:20:31] Set ATHENA_PROC_NUMBER=8
[2026-01-13 17:20:31] Set ATHENA_CORE_NUMBER=8
[2026-01-13 17:20:31] Starting ATLAS job with PandaID=6969256018
[2026-01-13 17:20:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 18:23:42]  *** The last 200 lines of the pilot log: ***
[2026-01-13 18:23:42] 2026-01-13 23:22:55,273 | INFO     | adding to output.list: log.48215263._000376.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/46/d0/log.48215263._000376.job.log.tg
[2026-01-13 18:23:42] 2026-01-13 23:22:55,274 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-13 18:23:42] 2026-01-13 23:22:55,274 | INFO     | summary of transferred files:
[2026-01-13 18:23:42] 2026-01-13 23:22:55,274 | INFO     |  -- lfn=log.48215263._000376.job.log.tgz.1, status_code=0, status=transferred
[2026-01-13 18:23:42] 2026-01-13 23:22:55,274 | INFO     | stage-out finished correctly
[2026-01-13 18:23:42] 2026-01-13 23:22:55,286 | INFO     | monitor loop #253: job 0:6969256018 is in state 'finished'
[2026-01-13 18:23:42] 2026-01-13 23:22:55,287 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 18:23:42] 2026-01-13 23:22:56,531 | INFO     | time since job start (3706s) is within the limit (349056.0s)
[2026-01-13 18:23:42] 2026-01-13 23:22:56,895 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-13 18:23:42] 2026-01-13 23:22:57,790 | INFO     | monitor loop #254: job 0:6969256018 is in state 'finished'
[2026-01-13 18:23:42] 2026-01-13 23:22:57,791 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 18:23:42] 2026-01-13 23:22:58,542 | INFO     | time since job start (3708s) is within the limit (349056.0s)
[2026-01-13 18:23:42] 2026-01-13 23:22:59,666 | INFO     | job 6969256018 has state=finished
[2026-01-13 18:23:42] 2026-01-13 23:22:59,667 | INFO     | preparing for final server update for job 6969256018 in state='finished'
[2026-01-13 18:23:42] 2026-01-13 23:22:59,741 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-13 18:23:42] 2026-01-13 23:22:59,741 | INFO     | this job has now completed (state=finished)
[2026-01-13 18:23:42] 2026-01-13 23:22:59,741 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-13 18:23:42] 2026-01-13 23:22:59,741 | INFO     | log transfer has been attempted: DONE
[2026-01-13 18:23:42] 2026-01-13 23:22:59,741 | INFO     | job 6969256018 has finished - writing final server update
[2026-01-13 18:23:42] 2026-01-13 23:22:59,742 | INFO     | total number of processed events: 400 (read)
[2026-01-13 18:23:42] 2026-01-13 23:22:59,753 | INFO     | executing command: lscpu
[2026-01-13 18:23:42] 2026-01-13 23:22:59,890 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-13 18:23:42] 2026-01-13 23:23:00,295 | INFO     | monitor loop #255: job 0:6969256018 is in state 'finished'
[2026-01-13 18:23:42] 2026-01-13 23:23:00,296 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 18:23:42] 2026-01-13 23:23:00,549 | INFO     | time since job start (3710s) is within the limit (349056.0s)
[2026-01-13 18:23:42] 2026-01-13 23:23:02,559 | INFO     | time since job start (3712s) is within the limit (349056.0s)
[2026-01-13 18:23:42] 2026-01-13 23:23:02,799 | INFO     | monitor loop #256: job 0:6969256018 is in state 'finished'
[2026-01-13 18:23:42] 2026-01-13 23:23:02,800 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 18:23:42] 2026-01-13 23:23:04,565 | INFO     | time since job start (3714s) is within the limit (349056.0s)
[2026-01-13 18:23:42] 2026-01-13 23:23:05,304 | INFO     | monitor loop #257: job 0:6969256018 is in state 'finished'
[2026-01-13 18:23:42] 2026-01-13 23:23:05,305 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 18:23:42] 2026-01-13 23:23:06,834 | INFO     | PID=534205 has CPU usage=9.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-13 18:23:42] 2026-01-13 23:23:06,834 | INFO     | .. there are 18 such processes running
[2026-01-13 18:23:42] 2026-01-13 23:23:07,827 | INFO     | monitor loop #258: job 0:6969256018 is in state 'finished'
[2026-01-13 18:23:42] 2026-01-13 23:23:07,828 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 18:23:42] 2026-01-13 23:23:07,835 | INFO     | time since job start (3717s) is within the limit (349056.0s)
[2026-01-13 18:23:42] 2026-01-13 23:23:08,971 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-13 18:23:42] 2026-01-13 23:23:08,976 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3227.850291666666
[2026-01-13 18:23:42] 2026-01-13 23:23:08,996 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6969256018/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 18:23:42] 2026-01-13 23:23:08,997 | INFO     | extracted standard info from prmon json
[2026-01-13 18:23:42] 2026-01-13 23:23:08,997 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 18:23:42] 2026-01-13 23:23:08,997 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 18:23:42] 2026-01-13 23:23:08,999 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 18:23:42] 2026-01-13 23:23:09,000 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 18:23:42] 2026-01-13 23:23:09,001 | INFO     | fitting pss+swap vs Time
[2026-01-13 18:23:42] 2026-01-13 23:23:09,001 | INFO     | sum of square deviations: 46148330.98113208
[2026-01-13 18:23:42] 2026-01-13 23:23:09,001 | INFO     | sum of deviations: -3265859915.415094
[2026-01-13 18:23:42] 2026-01-13 23:23:09,001 | INFO     | mean x: 1768344808.018868
[2026-01-13 18:23:42] 2026-01-13 23:23:09,001 | INFO     | mean y: 2664094.4150943398
[2026-01-13 18:23:42] 2026-01-13 23:23:09,001 | INFO     | intersect: 125146224053.33147
[2026-01-13 18:23:42] 2026-01-13 23:23:09,001 | INFO     | chi2: 0.030036527797603258
[2026-01-13 18:23:42] 2026-01-13 23:23:09,001 | INFO     | current memory leak: -70.77 B/s (using 53 data points, chi2=0.03)
[2026-01-13 18:23:42] 2026-01-13 23:23:09,002 | INFO     | could have reported an average CPU frequency of 3220 MHz (6 samples)
[2026-01-13 18:23:42] 2026-01-13 23:23:09,002 | INFO     | ..............................
[2026-01-13 18:23:42] 2026-01-13 23:23:09,002 | INFO     | . Timing measurements:
[2026-01-13 18:23:42] 2026-01-13 23:23:09,002 | INFO     | . get job = 0 s
[2026-01-13 18:23:42] 2026-01-13 23:23:09,002 | INFO     | . initial setup = 3 s
[2026-01-13 18:23:42] 2026-01-13 23:23:09,002 | INFO     | . payload setup = 9 s
[2026-01-13 18:23:42] 2026-01-13 23:23:09,002 | INFO     | . stage-in = 0 s
[2026-01-13 18:23:42] 2026-01-13 23:23:09,002 | INFO     | . payload execution = 3660 s
[2026-01-13 18:23:42] 2026-01-13 23:23:09,002 | INFO     | . stage-out = 1 s
[2026-01-13 18:23:42] 2026-01-13 23:23:09,002 | INFO     | . log creation = 0 s
[2026-01-13 18:23:42] 2026-01-13 23:23:09,002 | INFO     | ..............................
[2026-01-13 18:23:42] 2026-01-13 23:23:09,480 | INFO     | 
[2026-01-13 18:23:42] 2026-01-13 23:23:09,481 | INFO     | job summary report
[2026-01-13 18:23:42] 2026-01-13 23:23:09,481 | INFO     | --------------------------------------------------
[2026-01-13 18:23:42] 2026-01-13 23:23:09,481 | INFO     | PanDA job id: 6969256018
[2026-01-13 18:23:42] 2026-01-13 23:23:09,481 | INFO     | task id: 48215263
[2026-01-13 18:23:42] 2026-01-13 23:23:09,481 | INFO     | errors: (none)
[2026-01-13 18:23:42] 2026-01-13 23:23:09,481 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 18:23:42] 2026-01-13 23:23:09,481 | INFO     | pilot state: finished 
[2026-01-13 18:23:42] 2026-01-13 23:23:09,481 | INFO     | transexitcode: 0
[2026-01-13 18:23:42] 2026-01-13 23:23:09,481 | INFO     | exeerrorcode: 0
[2026-01-13 18:23:42] 2026-01-13 23:23:09,481 | INFO     | exeerrordiag: 
[2026-01-13 18:23:42] 2026-01-13 23:23:09,481 | INFO     | exitcode: 0
[2026-01-13 18:23:42] 2026-01-13 23:23:09,481 | INFO     | exitmsg: OK
[2026-01-13 18:23:42] 2026-01-13 23:23:09,481 | INFO     | cpuconsumptiontime: 20261 s
[2026-01-13 18:23:42] 2026-01-13 23:23:09,481 | INFO     | nevents: 400
[2026-01-13 18:23:42] 2026-01-13 23:23:09,482 | INFO     | neventsw: 0
[2026-01-13 18:23:42] 2026-01-13 23:23:09,482 | INFO     | pid: 540933
[2026-01-13 18:23:42] 2026-01-13 23:23:09,482 | INFO     | pgrp: 540933
[2026-01-13 18:23:42] 2026-01-13 23:23:09,482 | INFO     | corecount: 8
[2026-01-13 18:23:42] 2026-01-13 23:23:09,482 | INFO     | event service: False
[2026-01-13 18:23:42] 2026-01-13 23:23:09,482 | INFO     | sizes: {0: 2283104, 1: 2283789, 2: 2283988, 12: 2283988, 15: 2284278, 23: 2284306, 3672: 2310130, 3673: 2310129, 3675: 2319183, 3676: 2319239, 3688: 2319433}
[2026-01-13 18:23:42] 2026-01-13 23:23:09,482 | INFO     | --------------------------------------------------
[2026-01-13 18:23:42] 2026-01-13 23:23:09,482 | INFO     | 
[2026-01-13 18:23:42] 2026-01-13 23:23:09,482 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-01-13 18:23:42] 2026-01-13 23:23:09,548 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 18:23:42] 2026-01-13 23:23:09,548 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 18:23:42] 2026-01-13 23:23:09,548 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 18:23:42] 2026-01-13 23:23:09,548 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 18:23:42] 2026-01-13 23:23:09,548 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 18:23:42] 2026-01-13 23:23:09,548 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 18:23:42] 2026-01-13 23:23:09,549 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 18:23:42] 2026-01-13 23:23:09,549 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 18:23:42] 2026-01-13 23:23:09,549 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 18:23:42] 2026-01-13 23:23:09,549 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 18:23:42] 2026-01-13 23:23:09,549 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 18:23:42] 2026-01-13 23:23:09,549 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 18:23:42] 2026-01-13 23:23:09,549 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 18:23:42] 2026-01-13 23:23:09,549 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 18:23:42] 2026-01-13 23:23:09,549 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 18:23:42] 2026-01-13 23:23:09,549 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 18:23:42] 2026-01-13 23:23:09,549 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 18:23:42] 2026-01-13 23:23:09,549 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 18:23:42] 2026-01-13 23:23:09,549 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 18:23:42] 2026-01-13 23:23:09,550 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 18:23:42] 2026-01-13 23:23:09,550 | INFO     | job 6969256018 has completed (purged errors)
[2026-01-13 18:23:42] 2026-01-13 23:23:09,550 | INFO     | overall cleanup function is called
[2026-01-13 18:23:42] 2026-01-13 23:23:10,563 | INFO     | --- collectZombieJob: --- 10, [540933]
[2026-01-13 18:23:42] 2026-01-13 23:23:10,563 | INFO     | zombie collector waiting for pid 540933
[2026-01-13 18:23:42] 2026-01-13 23:23:10,564 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 18:23:42] 2026-01-13 23:23:10,564 | INFO     | collected zombie processes
[2026-01-13 18:23:42] 2026-01-13 23:23:10,564 | INFO     | will attempt to kill all subprocesses of pid=540933
[2026-01-13 18:23:42] 2026-01-13 23:23:11,582 | INFO     | process IDs to be killed: [540933] (in reverse order)
[2026-01-13 18:23:42] 2026-01-13 23:23:11,774 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 18:23:42] 2026-01-13 23:23:11,775 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 18:23:42] 2026-01-13 23:23:11,789 | INFO     | did not find any defunct processes belonging to 540933
[2026-01-13 18:23:42] 2026-01-13 23:23:11,805 | INFO     | did not find any defunct processes belonging to 540933
[2026-01-13 18:23:42] 2026-01-13 23:23:11,805 | INFO     | ready for new job
[2026-01-13 18:23:42] 2026-01-13 23:23:11,805 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 18:23:42] 2026-01-13 23:23:11,809 | INFO     | ***************************************
[2026-01-13 18:23:42] 2026-01-13 23:23:11,810 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 18:23:42] 2026-01-13 23:23:11,810 | INFO     | ***************************************
[2026-01-13 18:23:42] 2026-01-13 23:23:11,810 | INFO     | 
[2026-01-13 18:23:42] 2026-01-13 23:23:11,823 | INFO     | architecture information:
[2026-01-13 18:23:42] 2026-01-13 23:23:11,826 | INFO     | executing command: cat /etc/os-release
[2026-01-13 18:23:42] 2026-01-13 23:23:11,880 | INFO     | cat /etc/os-release:
[2026-01-13 18:23:42] NAME="CentOS Linux"
[2026-01-13 18:23:42] VERSION="7 (Core)"
[2026-01-13 18:23:42] ID="centos"
[2026-01-13 18:23:42] ID_LIKE="rhel fedora"
[2026-01-13 18:23:42] VERSION_ID="7"
[2026-01-13 18:23:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 18:23:42] ANSI_COLOR="0;31"
[2026-01-13 18:23:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 18:23:42] HOME_URL="https://www.centos.org/"
[2026-01-13 18:23:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 18:23:42] 
[2026-01-13 18:23:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 18:23:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 18:23:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 18:23:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 18:23:42] 
[2026-01-13 18:23:42] 2026-01-13 23:23:11,880 | INFO     | ***************************************
[2026-01-13 18:23:42] 2026-01-13 23:23:12,390 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-01-13 18:23:42] 2026-01-13 23:23:12,482 | INFO     | sufficient remaining disk space (121209094144 B)
[2026-01-13 18:23:42] 2026-01-13 23:23:12,483 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 18:23:42] 2026-01-13 23:23:12,483 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 18:23:42] 2026-01-13 23:23:12,483 | INFO     | update_server=False
[2026-01-13 18:23:42] 2026-01-13 23:23:12,483 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 18:23:42] 2026-01-13 23:23:12,487 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 18:23:42] 2026-01-13 23:23:12,844 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-13 18:23:42] 2026-01-13 23:23:12,845 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-13 18:23:42] 2026-01-13 23:23:12,845 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 18:23:42] 2026-01-13 23:23:12,845 | INFO     | will abort loop
[2026-01-13 18:23:42] 2026-01-13 23:23:13,307 | INFO     | all job control threads have been joined
[2026-01-13 18:23:42] 2026-01-13 23:23:13,373 | INFO     | all payload control threads have been joined
[2026-01-13 18:23:42] 2026-01-13 23:23:13,488 | INFO     | [job] retrieve thread has finished
[2026-01-13 18:23:42] 2026-01-13 23:23:13,502 | INFO     | all data control threads have been joined
[2026-01-13 18:23:42] 2026-01-13 23:23:13,574 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 18:23:42] 2026-01-13 23:23:13,623 | INFO     | [data] copytool_in thread has finished
[2026-01-13 18:23:42] 2026-01-13 23:23:13,754 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 18:23:42] 2026-01-13 23:23:13,755 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 18:23:42] 2026-01-13 23:23:13,850 | INFO     | [job] job monitor thread has finished
[2026-01-13 18:23:42] 2026-01-13 23:23:14,136 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 18:23:42] 2026-01-13 23:23:14,269 | INFO     | [payload] validate_post thread has finished
[2026-01-13 18:23:42] 2026-01-13 23:23:14,313 | INFO     | [job] control thread has finished
[2026-01-13 18:23:42] 2026-01-13 23:23:14,379 | INFO     | [payload] control thread has finished
[2026-01-13 18:23:42] 2026-01-13 23:23:14,507 | INFO     | [data] control thread has finished
[2026-01-13 18:23:42] 2026-01-13 23:23:14,547 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 18:23:42] 2026-01-13 23:23:14,549 | INFO     | [job] validate thread has finished
[2026-01-13 18:23:42] 2026-01-13 23:23:14,557 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 18:23:42] 2026-01-13 23:23:15,075 | INFO     | [payload] failed_post thread has finished
[2026-01-13 18:23:42] 2026-01-13 23:23:15,142 | INFO     | [job] queue monitor thread has finished
[2026-01-13 18:23:42] 2026-01-13 23:23:15,611 | INFO     | [data] copytool_out thread has finished
[2026-01-13 18:23:42] 2026-01-13 23:23:16,469 | INFO     | [monitor] cgroup control has ended
[2026-01-13 18:23:42] 2026-01-13 23:23:16,502 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 18:23:42] 2026-01-13 23:23:17,132 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139668292663104)>', '<ExcThread(monitor, started 139667773060864)>']
[2026-01-13 18:23:42] 2026-01-13 23:23:22,158 | INFO     | all workflow threads have been joined
[2026-01-13 18:23:42] 2026-01-13 23:23:22,159 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 18:23:42] 2026-01-13 23:23:22,159 | INFO     | traces error code: 0
[2026-01-13 18:23:42] 2026-01-13 23:23:22,159 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 18:23:42] 2026-01-13 23:23:41,694 | INFO     | PID=534205 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-13 18:23:42] 2026-01-13 23:23:41,695 | INFO     | .. there are 18 such processes running
[2026-01-13 18:23:42] 2026-01-13 23:23:41,696 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 18:23:42] 2026-01-13 23:23:41,696 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 18:23:42] 2026-01-13 23:23:41,696 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 18:23:42] 2026-01-13 23:23:41,696 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 18:23:42] 2026-01-13 23:23:41,696 | INFO     | [monitor] control thread has ended
[2026-01-13 18:23:42] 2026-01-13 23:23:41,847 [wrapper] ==== pilot stdout END ====
[2026-01-13 18:23:42] 2026-01-13 23:23:41,869 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 18:23:42] 2026-01-13 23:23:41,892 [wrapper] pilotpid: 534205
[2026-01-13 18:23:42] 2026-01-13 23:23:41,909 [wrapper] Pilot exit status: 0
[2026-01-13 18:23:42] 2026-01-13 23:23:41,966 [wrapper] pandaids: 6969256018
[2026-01-13 18:23:42] 2026-01-13 23:23:42,073 [wrapper] cleanup supervisor_pilot  835610 534206
[2026-01-13 18:23:42] 2026-01-13 23:23:42,078 [wrapper] Test setup, not cleaning
[2026-01-13 18:23:42] 2026-01-13 23:23:42,080 [wrapper] apfmon messages muted
[2026-01-13 18:23:42] 2026-01-13 23:23:42,084 [wrapper] ==== wrapper stdout END ====
[2026-01-13 18:23:42] 2026-01-13 23:23:42,086 [wrapper] ==== wrapper stderr END ====
[2026-01-13 18:23:42]  *** Error codes and diagnostics ***
[2026-01-13 18:23:42]     "exeErrorCode": 0,
[2026-01-13 18:23:42]     "exeErrorDiag": "",
[2026-01-13 18:23:42]     "pilotErrorCode": 0,
[2026-01-13 18:23:42]     "pilotErrorDiag": "",
[2026-01-13 18:23:42]  *** Listing of results directory ***
[2026-01-13 18:23:42] total 740508
[2026-01-13 18:23:42] -rw-r--r--. 1 boincer umatlas    579449 Jan 13 16:10 pilot3.tar.gz
[2026-01-13 18:23:42] -rwx------. 1 boincer umatlas     36322 Jan 13 16:42 runpilot2-wrapper.sh
[2026-01-13 18:23:42] -rw-r--r--. 1 boincer umatlas      5112 Jan 13 16:42 queuedata.json
[2026-01-13 18:23:42] -rw-r--r--. 1 boincer umatlas       100 Jan 13 17:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 18:23:42] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 13 17:20 run_atlas
[2026-01-13 18:23:42] -rw-r--r--. 1 boincer umatlas       105 Jan 13 17:20 job.xml
[2026-01-13 18:23:42] -rw-r--r--. 2 boincer umatlas 600557140 Jan 13 17:20 EVNT.32794306._000016.pool.root.1
[2026-01-13 18:23:42] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 17:20 start_atlas.sh
[2026-01-13 18:23:42] drwxrwx--x. 2 boincer umatlas      4096 Jan 13 17:20 shared
[2026-01-13 18:23:42] -rw-r--r--. 2 boincer umatlas    592378 Jan 13 17:20 input.tar.gz
[2026-01-13 18:23:42] -rw-r--r--. 1 boincer umatlas         0 Jan 13 17:20 boinc_lockfile
[2026-01-13 18:23:42] -rw-r--r--. 1 boincer umatlas      2498 Jan 13 17:20 pandaJob.out
[2026-01-13 18:23:42] -rw-------. 1 boincer umatlas        57 Jan 13 17:20 setup.sh.local
[2026-01-13 18:23:42] -rw-------. 1 boincer umatlas    997226 Jan 13 17:21 agis_schedconf.cvmfs.json
[2026-01-13 18:23:42] -rw-------. 1 boincer umatlas   1516246 Jan 13 17:21 agis_ddmendpoints.agis.ALL.json
[2026-01-13 18:23:42] drwx------. 5 boincer umatlas      4096 Jan 13 17:21 pilot3
[2026-01-13 18:23:42] -rw-r--r--. 1 boincer umatlas      6957 Jan 13 18:18 init_data.xml
[2026-01-13 18:23:42] -rw-------. 1 boincer umatlas 152134142 Jan 13 18:22 HITS.48215263._000376.pool.root.1
[2026-01-13 18:23:42] -rw-r--r--. 1 boincer umatlas       530 Jan 13 18:22 boinc_task_state.xml
[2026-01-13 18:23:42] -rw-------. 1 boincer umatlas      1032 Jan 13 18:22 memory_monitor_summary.json
[2026-01-13 18:23:42] -rw-------. 1 boincer umatlas    295500 Jan 13 18:22 log.48215263._000376.job.log.tgz.1
[2026-01-13 18:23:42] -rw-------. 1 boincer umatlas      7762 Jan 13 18:23 heartbeat.json
[2026-01-13 18:23:42] -rw-r--r--. 1 boincer umatlas        27 Jan 13 18:23 wrapper_checkpoint.txt
[2026-01-13 18:23:42] -rw-r--r--. 1 boincer umatlas      8192 Jan 13 18:23 boinc_mmap_file
[2026-01-13 18:23:42] -rw-------. 1 boincer umatlas       822 Jan 13 18:23 pilotlog.txt
[2026-01-13 18:23:42] -rw-------. 1 boincer umatlas        95 Jan 13 18:23 pilot_heartbeat.json
[2026-01-13 18:23:42] -rw-------. 1 boincer umatlas    535615 Jan 13 18:23 log.48215263._000376.job.log.1
[2026-01-13 18:23:42] -rw-------. 1 boincer umatlas       357 Jan 13 18:23 output.list
[2026-01-13 18:23:42] -rw-r--r--. 1 boincer umatlas       620 Jan 13 18:23 runtime_log
[2026-01-13 18:23:42] -rw-------. 1 boincer umatlas    849920 Jan 13 18:23 result.tar.gz
[2026-01-13 18:23:42] -rw-r--r--. 1 boincer umatlas      9342 Jan 13 18:23 runtime_log.err
[2026-01-13 18:23:42] -rw-------. 1 boincer umatlas       652 Jan 13 18:23 b6ZKDmwK1z8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmVHoKDmHqBCrm.diag
[2026-01-13 18:23:42] -rw-r--r--. 1 boincer umatlas     22467 Jan 13 18:23 stderr.txt
[2026-01-13 18:23:42] HITS file was successfully produced:
[2026-01-13 18:23:42] -rw-------. 1 boincer umatlas 152134142 Jan 13 18:22 shared/HITS.pool.root.1
[2026-01-13 18:23:42]  *** Contents of shared directory: ***
[2026-01-13 18:23:42] total 736492
[2026-01-13 18:23:42] -rw-r--r--. 2 boincer umatlas 600557140 Jan 13 17:20 ATLAS.root_0
[2026-01-13 18:23:42] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 17:20 start_atlas.sh
[2026-01-13 18:23:42] -rw-r--r--. 2 boincer umatlas    592378 Jan 13 17:20 input.tar.gz
[2026-01-13 18:23:42] -rw-------. 1 boincer umatlas 152134142 Jan 13 18:22 HITS.pool.root.1
[2026-01-13 18:23:42] -rw-------. 1 boincer umatlas    849920 Jan 13 18:23 result.tar.gz
18:23:43 (530427): run_atlas exited; CPU time 20335.143316
18:23:43 (530427): called boinc_finish(0)

</stderr_txt>
]]>

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