Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-18 16:58:40 (25876): vboxwrapper version 26210
2026-01-18 16:58:40 (25876): BOINC client version: 8.2.8
2026-01-18 16:58:40 (25876): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2026-01-18 16:58:41 (25876): Successfully copied 'init_data.xml' to the shared directory.
2026-01-18 16:58:41 (25876): Create VM. (boinc_ebf5dc2c27876cde, slot#0)
2026-01-18 16:58:41 (25876): Setting Memory Size for VM. (4800MB)
2026-01-18 16:58:42 (25876): Setting CPU Count for VM. (8)
2026-01-18 16:58:42 (25876): Setting Chipset Options for VM.
2026-01-18 16:58:42 (25876): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-18 16:58:42 (25876): Setting Boot Options for VM.
2026-01-18 16:58:43 (25876): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-18 16:58:43 (25876): Enabling VM Network Access.
2026-01-18 16:58:43 (25876): Disabling USB Support for VM.
2026-01-18 16:58:44 (25876): Disabling COM Port Support for VM.
2026-01-18 16:58:44 (25876): Disabling LPT Port Support for VM.
2026-01-18 16:58:44 (25876): Disabling Audio Support for VM.
2026-01-18 16:58:44 (25876): Disabling Clipboard Support for VM.
2026-01-18 16:58:45 (25876): Disabling Drag and Drop Support for VM.
2026-01-18 16:58:45 (25876): Adding storage controller(s) to VM.
2026-01-18 16:58:45 (25876): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-18 16:58:47 (25876): Adding VirtualBox Guest Additions to VM.
2026-01-18 16:58:48 (25876): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-18 16:58:48 (25876): forwarding host port 52537 to guest port 80
2026-01-18 16:58:48 (25876): Enabling remote desktop for VM.
2026-01-18 16:58:48 (25876): Required extension pack not installed, remote desktop not enabled.
2026-01-18 16:58:48 (25876): Enabling shared directory for VM.
2026-01-18 16:58:49 (25876): Starting VM using VBoxManage interface. (boinc_ebf5dc2c27876cde, slot#0)
2026-01-18 16:58:54 (25876): Successfully started VM. (PID = '25516')
2026-01-18 16:58:54 (25876): Reporting VM Process ID to BOINC.
2026-01-18 16:58:54 (25876): Guest Log: BIOS: VirtualBox 7.0.6
2026-01-18 16:58:54 (25876): Guest Log: CPUID EDX: 0x178bfbff
2026-01-18 16:58:54 (25876): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-18 16:58:54 (25876): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-18 16:58:54 (25876): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-18 16:58:54 (25876): Detected: Web Application Enabled (http://localhost:52537)
2026-01-18 16:58:54 (25876): Preference change detected
2026-01-18 16:58:54 (25876): Setting CPU throttle for VM. (100%)
2026-01-18 16:58:54 (25876): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-18 16:58:56 (25876): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-18 16:58:56 (25876): Guest Log: BIOS: Booting from Hard Disk...
2026-01-18 16:58:59 (25876): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-18 16:58:59 (25876): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-18 16:58:59 (25876): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-18 16:58:59 (25876): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-18 16:58:59 (25876): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-18 16:58:59 (25876): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-18 16:58:59 (25876): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-18 16:58:59 (25876): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-18 16:58:59 (25876): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-18 16:58:59 (25876): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-18 16:58:59 (25876): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-18 16:58:59 (25876): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-18 16:58:59 (25876): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-18 16:58:59 (25876): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-18 16:58:59 (25876): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-18 16:58:59 (25876): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-18 16:58:59 (25876): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-18 16:58:59 (25876): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-18 16:58:59 (25876): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-18 16:58:59 (25876): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-18 16:58:59 (25876): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-18 16:58:59 (25876): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-18 16:58:59 (25876): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-18 16:58:59 (25876): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-18 16:58:59 (25876): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-18 16:58:59 (25876): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-18 16:58:59 (25876): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-18 16:58:59 (25876): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-18 16:58:59 (25876): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-18 16:58:59 (25876): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-18 16:58:59 (25876): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-18 16:58:59 (25876): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-18 16:59:11 (25876): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-18 16:59:11 (25876): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-18 16:59:29 (25876): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-18 16:59:29 (25876): Guest Log: 00:00:00.000128 main     Log opened 2026-01-18T16:59:27.169477000Z
2026-01-18 16:59:29 (25876): Guest Log: 00:00:00.000204 main     OS Product: Linux
2026-01-18 16:59:29 (25876): Guest Log: 00:00:00.000253 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-18 16:59:29 (25876): Guest Log: 00:00:00.000284 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-18 16:59:29 (25876): Guest Log: 00:00:00.000307 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-18 16:59:29 (25876): Guest Log: 00:00:00.000308 main     Process ID: 1373
2026-01-18 16:59:29 (25876): Guest Log: 00:00:00.000308 main     Package type: LINUX_64BITS_GENERIC
2026-01-18 16:59:29 (25876): Guest Log: 00:00:00.000864 main     5.2.32 r132073 started. Verbose level = 0
2026-01-18 16:59:29 (25876): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-18 16:59:29 (25876): Guest Log: [INFO] Mounting shared directory
2026-01-18 16:59:29 (25876): Guest Log: [INFO] Checking for init_data.xml
2026-01-18 16:59:34 (25876): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-18 16:59:34 (25876): Guest Log: [INFO] Detected branch: prod
2026-01-18 16:59:34 (25876): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-18 16:59:34 (25876): Guest Log: Copying input files
2026-01-18 16:59:37 (25876): Guest Log: Copied input files into RunAtlas.
2026-01-18 16:59:37 (25876): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-18 16:59:37 (25876): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-18 16:59:37 (25876): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-18 16:59:37 (25876): Guest Log: Further information can be found at the LHC@home message board.
2026-01-18 16:59:48 (25876): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-18 16:59:48 (25876): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-18 16:59:48 (25876): Guest Log: 2.6.3.0 1648 0 32152 155285 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-01-18 16:59:54 (25876): Guest Log: copied the webapp to /var/www
2026-01-18 16:59:54 (25876): Guest Log: ATHENA_PROC_NUMBER=8
2026-01-18 16:59:54 (25876): Guest Log: ATHENA_CORE_NUMBER=8
2026-01-18 16:59:55 (25876): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-18 16:59:56 (25876): Guest Log:  *** Starting ATLAS job. (PandaID=6969243903 taskID=48213215) ***
2026-01-18 17:36:35 (25876): VM state change detected. (old = 'running', new = 'paused')
2026-01-18 17:42:22 (25876): VM state change detected. (old = 'paused', new = 'running')
2026-01-18 17:42:24 (25876): VM state change detected. (old = 'running', new = 'paused')
2026-01-18 17:44:23 (25876): VM state change detected. (old = 'paused', new = 'running')
2026-01-18 17:44:50 (25876): VM state change detected. (old = 'running', new = 'paused')
2026-01-18 18:10:26 (25876): VM state change detected. (old = 'paused', new = 'running')
2026-01-18 18:10:42 (25876): Guest Log: 00:37:51.911048 timesync vgsvcTimeSyncWorker: Radical guest time change: 2 012 162 859 000ns (GuestNow=1 768 759 841 241 469 000 ns GuestLast=1 768 757 829 078 610 000 ns fSetTimeLastLoop=true )
2026-01-18 18:10:53 (25876): VM state change detected. (old = 'running', new = 'paused')
2026-01-18 18:12:40 (25876): VM state change detected. (old = 'paused', new = 'running')
2026-01-18 18:13:13 (25876): VM state change detected. (old = 'running', new = 'paused')
2026-01-18 18:14:19 (25876): VM state change detected. (old = 'paused', new = 'running')
2026-01-18 18:14:49 (25876): VM state change detected. (old = 'running', new = 'paused')
2026-01-18 18:20:26 (25876): VM state change detected. (old = 'paused', new = 'running')
2026-01-18 18:20:29 (25876): VM state change detected. (old = 'running', new = 'paused')
2026-01-18 18:23:45 (25876): VM state change detected. (old = 'paused', new = 'running')
2026-01-18 18:23:47 (25876): VM state change detected. (old = 'running', new = 'paused')
2026-01-18 18:28:26 (25876): VM state change detected. (old = 'paused', new = 'running')
2026-01-18 19:30:29 (25876): Status Report: Elapsed Time: '6000.000000'
2026-01-18 19:30:29 (25876): Status Report: CPU Time: '22409.886852'
2026-01-18 19:34:01 (25876): VM state change detected. (old = 'running', new = 'paused')
2026-01-18 19:39:50 (25876): VM state change detected. (old = 'paused', new = 'running')
2026-01-18 19:39:58 (25876): VM state change detected. (old = 'running', new = 'paused')
2026-01-18 19:41:20 (25876): VM state change detected. (old = 'paused', new = 'running')
2026-01-18 19:41:22 (25876): VM state change detected. (old = 'running', new = 'paused')
2026-01-18 19:59:36 (25876): VM state change detected. (old = 'paused', new = 'running')
2026-01-18 21:39:21 (25876): Status Report: Elapsed Time: '12000.000000'
2026-01-18 21:39:21 (25876): Status Report: CPU Time: '57646.893529'
2026-01-18 21:59:36 (25876): Guest Log:  *** Job finished ***
2026-01-18 21:59:36 (25876): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-18 21:59:36 (25876): Guest Log: 2026-01-18 21:39:50,365 | INFO     | [job] queue monitor thread has finished
2026-01-18 21:59:36 (25876): Guest Log: 2026-01-18 21:39:51,425 | INFO     | [data] queue_monitor thread has finished
2026-01-18 21:59:36 (25876): Guest Log: 2026-01-18 21:39:54,854 | INFO     | [monitor] cgroup control has ended
2026-01-18 21:59:36 (25876): Guest Log: 2026-01-18 21:39:55,840 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140000940263232)>', '<ExcThread(monitor, started 140000213587712)>']
2026-01-18 21:59:36 (25876): Guest Log: 2026-01-18 21:39:56,491 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-18 21:59:36 (25876): Guest Log: 2026-01-18 21:39:56,491 | INFO     | [monitor] control thread has ended
2026-01-18 21:59:36 (25876): Guest Log: 2026-01-18 21:40:00,846 | INFO     | all workflow threads have been joined
2026-01-18 21:59:36 (25876): Guest Log: 2026-01-18 21:40:00,846 | INFO     | end of generic workflow (traces error code: 0)
2026-01-18 21:59:36 (25876): Guest Log: 2026-01-18 21:40:00,846 | INFO     | traces error code: 0
2026-01-18 21:59:36 (25876): Guest Log: 2026-01-18 21:40:00,846 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-18 21:59:36 (25876): Guest Log: 2026-01-18 21:40:00,980 [wrapper] ==== pilot stdout END ====
2026-01-18 21:59:36 (25876): Guest Log: 2026-01-18 21:40:00,985 [wrapper] ==== wrapper stdout RESUME ====
2026-01-18 21:59:36 (25876): Guest Log: 2026-01-18 21:40:00,994 [wrapper] pilotpid: 6214
2026-01-18 21:59:36 (25876): Guest Log: 2026-01-18 21:40:00,999 [wrapper] Pilot exit status: 0
2026-01-18 21:59:36 (25876): Guest Log: 2026-01-18 21:40:01,064 [wrapper] pandaids: 6969243903
2026-01-18 21:59:36 (25876): Guest Log: 2026-01-18 21:40:01,121 [wrapper] cleanup supervisor_pilot 12080 6215
2026-01-18 21:59:36 (25876): Guest Log: 2026-01-18 21:40:01,126 [wrapper] Test setup, not cleaning
2026-01-18 21:59:36 (25876): Guest Log: 2026-01-18 21:40:01,132 [wrapper] apfmon messages muted
2026-01-18 21:59:36 (25876): Guest Log: 2026-01-18 21:40:01,137 [wrapper] ==== wrapper stdout END ====
2026-01-18 21:59:36 (25876): Guest Log: 2026-01-18 21:40:01,142 [wrapper] ==== wrapper stderr END ====
2026-01-18 21:59:36 (25876): Guest Log:  *** Error codes and diagnostics ***
2026-01-18 21:59:36 (25876): Guest Log:     "exeErrorCode": 0,
2026-01-18 21:59:36 (25876): Guest Log:     "exeErrorDiag": "",
2026-01-18 21:59:36 (25876): Guest Log:     "pilotErrorCode": 0,
2026-01-18 21:59:36 (25876): Guest Log:     "pilotErrorDiag": "",
2026-01-18 21:59:36 (25876): Guest Log:  *** Listing of results directory ***
2026-01-18 21:59:36 (25876): Guest Log: total 286716
2026-01-18 21:59:36 (25876): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Jan 13 21:10 pilot3.tar.gz
2026-01-18 21:59:36 (25876): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 13 21:34 runpilot2-wrapper.sh
2026-01-18 21:59:36 (25876): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jan 13 21:34 queuedata.json
2026-01-18 21:59:36 (25876): Guest Log: -rwxr-xr-x. 1 atlas atlas      8561 Jan 18 16:59 init_data.xml
2026-01-18 21:59:36 (25876): Guest Log: -rwxr-xr-x. 1 atlas atlas    592413 Jan 18 16:59 input.tar.gz
2026-01-18 21:59:36 (25876): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Jan 18 16:59 start_atlas.sh
2026-01-18 21:59:36 (25876): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 18 16:59 EVNT.48213212._000003.pool.root.1 -> /data/./ATLAS.root_0
2026-01-18 21:59:36 (25876): Guest Log: -rw-r--r--. 1 atlas atlas      2631 Jan 18 16:59 pandaJob.out
2026-01-18 21:59:36 (25876): Guest Log: -rw-------. 1 atlas atlas   1002735 Jan 18 17:12 agis_schedconf.cvmfs.json
2026-01-18 21:59:36 (25876): Guest Log: drwx------. 5 atlas atlas      4096 Jan 18 17:12 pilot3
2026-01-18 21:59:36 (25876): Guest Log: -rw-------. 1 atlas atlas 286027533 Jan 18 21:38 HITS.48213215._000053.pool.root.1
2026-01-18 21:59:36 (25876): Guest Log: -rw-------. 1 atlas atlas        97 Jan 18 21:39 pilot_heartbeat.json
2026-01-18 21:59:36 (25876): Guest Log: -rw-------. 1 atlas atlas      1034 Jan 18 21:39 memory_monitor_summary.json
2026-01-18 21:59:36 (25876): Guest Log: -rw-------. 1 atlas atlas   1516246 Jan 18 21:39 agis_ddmendpoints.agis.ALL.json
2026-01-18 21:59:36 (25876): Guest Log: -rw-------. 1 atlas atlas    449952 Jan 18 21:39 log.48213215._000053.job.log.tgz.1
2026-01-18 21:59:36 (25876): Guest Log: -rw-------. 1 atlas atlas      7821 Jan 18 21:39 heartbeat.json
2026-01-18 21:59:36 (25876): Guest Log: -rw-------. 1 atlas atlas      4612 Jan 18 21:40 pilotlog.txt
2026-01-18 21:59:36 (25876): Guest Log: -rw-------. 1 atlas atlas   1409136 Jan 18 21:40 log.48213215._000053.job.log.1
2026-01-18 21:59:36 (25876): Guest Log: -rw-------. 1 atlas atlas       357 Jan 18 21:40 output.list
2026-01-18 21:59:36 (25876): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 18 21:40 runtime_log
2026-01-18 21:59:36 (25876): Guest Log: -rw-------. 1 atlas atlas   1873920 Jan 18 21:40 result.tar.gz
2026-01-18 21:59:36 (25876): Guest Log: -rw-r--r--. 1 atlas atlas      8750 Jan 18 21:40 runtime_log.err
2026-01-18 21:59:36 (25876): Guest Log: -rw-------. 1 atlas atlas       659 Jan 18 21:40 H9DODm6C1z8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmrFoKDmSwtUPm.diag
2026-01-18 21:59:37 (25876): Guest Log: Looking for outputfile HITS.48213215._000053.pool.root.1
2026-01-18 21:59:37 (25876): Guest Log: HITS file was successfully produced
2026-01-18 21:59:37 (25876): Guest Log: -rw-------. 1 atlas atlas 286027533 Jan 18 21:38 /home/atlas/RunAtlas/HITS.48213215._000053.pool.root.1
2026-01-18 21:59:37 (25876): Guest Log: Successfully finished the ATLAS job!
2026-01-18 21:59:37 (25876): Guest Log: Copying the results back to the shared directory!
2026-01-18 21:59:38 (25876): Guest Log:  *** Contents of shared directory: ***
2026-01-18 21:59:38 (25876): Guest Log: total 594812
2026-01-18 21:59:38 (25876): Guest Log: -rwxrwxrwx. 1 root root 320560263 Jan 18 16:58 ATLAS.root_0
2026-01-18 21:59:38 (25876): Guest Log: -rwxrwxrwx. 1 root root 286027533 Jan 18  2026 HITS.pool.root.1
2026-01-18 21:59:38 (25876): Guest Log: -rwxrwxrwx. 1 root root      8561 Jan 18 16:58 init_data.xml
2026-01-18 21:59:38 (25876): Guest Log: -rwxrwxrwx. 1 root root    592413 Jan 13 21:34 input.tar.gz
2026-01-18 21:59:38 (25876): Guest Log: -rwxrwxrwx. 1 root root   1873920 Jan 18  2026 result.tar.gz
2026-01-18 21:59:38 (25876): Guest Log: -rwxrwxrwx. 1 root root     15847 Jan 13 21:34 start_atlas.sh
2026-01-18 21:59:38 (25876): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-18 21:59:38 (25876): VM Completion File Detected.
2026-01-18 21:59:38 (25876): Powering off VM.
2026-01-18 21:59:39 (25876): Successfully stopped VM.
2026-01-18 21:59:39 (25876): Deregistering VM. (boinc_ebf5dc2c27876cde, slot#0)
2026-01-18 21:59:39 (25876): Removing network bandwidth throttle group from VM.
2026-01-18 21:59:39 (25876): Removing VM from VirtualBox.
2026-01-18 21:59:46 (25876): called boinc_finish(0)

</stderr_txt>
]]>

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