Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:11:10 (3217836): wrapper (7.7.26015): starting
16:11:10 (3217836): wrapper: running run_atlas (--nthreads 8)
[2026-01-13 16:11:10] Arguments: --nthreads 8
[2026-01-13 16:11:10] Threads: 8
[2026-01-13 16:11:10] Checking for CVMFS
[2026-01-13 16:11:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-13 16:11:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-13 16:11:10] Running cvmfs_config stat atlas.cern.ch
[2026-01-13 16:11:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-13 16:11:11] 2.13.3.0 7554 29161 244448 155102 1 938 33133264 40960001 24506 16776704 0 89846503 99.734 58002434 39137 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-13 16:11:11] CVMFS is ok
[2026-01-13 16:11:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 16:11:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 16:11:11] Further information can be found at the LHC@home message board.
[2026-01-13 16:11:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 16:11:11] Checking for apptainer binary...
[2026-01-13 16:11:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-13 16:11:11] Running /usr/bin/apptainer --version
[2026-01-13 16:11:11] apptainer version 1.4.5-2.el9
[2026-01-13 16:11:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 16:11:11] c-212-7.aglt2.org
[2026-01-13 16:11:11] apptainer works
[2026-01-13 16:11:11] Set ATHENA_PROC_NUMBER=8
[2026-01-13 16:11:11] Set ATHENA_CORE_NUMBER=8
[2026-01-13 16:11:11] Starting ATLAS job with PandaID=6969171048
[2026-01-13 16:11:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 20:21:18]  *** The last 200 lines of the pilot log: ***
[2026-01-13 20:21:18] 2026-01-14 01:20:44,515 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6969171048/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 20:21:18] 2026-01-14 01:20:44,516 | INFO     | extracted standard info from prmon json
[2026-01-13 20:21:18] 2026-01-14 01:20:44,516 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 20:21:18] 2026-01-14 01:20:44,517 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 20:21:18] 2026-01-14 01:20:44,517 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 20:21:18] 2026-01-14 01:20:44,517 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 20:21:18] 2026-01-14 01:20:44,521 | INFO     | fitting pss+swap vs Time
[2026-01-13 20:21:18] 2026-01-14 01:20:44,522 | INFO     | sum of square deviations: 4560051462.995923
[2026-01-13 20:21:18] 2026-01-14 01:20:44,523 | INFO     | sum of deviations: 33536507105.665424
[2026-01-13 20:21:18] 2026-01-14 01:20:44,524 | INFO     | mean x: 1768346183.0040817
[2026-01-13 20:21:18] 2026-01-14 01:20:44,524 | INFO     | mean y: 2504476.3346938775
[2026-01-13 20:21:18] 2026-01-14 01:20:44,524 | INFO     | intersect: -13002645753.40203
[2026-01-13 20:21:18] 2026-01-14 01:20:44,524 | INFO     | chi2: 2.5819331391912375
[2026-01-13 20:21:18] 2026-01-14 01:20:44,525 | INFO     | sum of square deviations: 4286521057.995818
[2026-01-13 20:21:18] 2026-01-14 01:20:44,526 | INFO     | sum of deviations: 51136301676.0875
[2026-01-13 20:21:18] 2026-01-14 01:20:44,526 | INFO     | mean x: 1768346030.5041666
[2026-01-13 20:21:18] 2026-01-14 01:20:44,527 | INFO     | mean y: 2514116.4125
[2026-01-13 20:21:18] 2026-01-14 01:20:44,527 | INFO     | intersect: -21093072458.368565
[2026-01-13 20:21:18] 2026-01-14 01:20:44,527 | INFO     | chi2: 1.589314301409181
[2026-01-13 20:21:18] 2026-01-14 01:20:44,527 | INFO     | current chi2=1.589314301409181 (change=38.444792497337225 %)
[2026-01-13 20:21:18] 2026-01-14 01:20:44,528 | INFO     | sum of square deviations: 4024153652.995747
[2026-01-13 20:21:18] 2026-01-14 01:20:44,529 | INFO     | sum of deviations: 49668281256.766014
[2026-01-13 20:21:18] 2026-01-14 01:20:44,530 | INFO     | mean x: 1768345878.0042553
[2026-01-13 20:21:18] 2026-01-14 01:20:44,530 | INFO     | mean y: 2513263.234042553
[2026-01-13 20:21:18] 2026-01-14 01:20:44,530 | INFO     | intersect: -21823368152.246544
[2026-01-13 20:21:18] 2026-01-14 01:20:44,530 | INFO     | chi2: 1.5898476395350953
[2026-01-13 20:21:18] 2026-01-14 01:20:44,530 | INFO     | current chi2=1.5898476395350953 (change=-0.03355775037331407 %)
[2026-01-13 20:21:18] 2026-01-14 01:20:44,530 | INFO     | right removable region: 234
[2026-01-13 20:21:18] 2026-01-14 01:20:44,531 | INFO     | sum of square deviations: 4286520447.995818
[2026-01-13 20:21:18] 2026-01-14 01:20:44,532 | INFO     | sum of deviations: -8805594544.69583
[2026-01-13 20:21:18] 2026-01-14 01:20:44,532 | INFO     | mean x: 1768346335.5041666
[2026-01-13 20:21:18] 2026-01-14 01:20:44,533 | INFO     | mean y: 2527927.1958333333
[2026-01-13 20:21:18] 2026-01-14 01:20:44,533 | INFO     | intersect: 3635157476.9577622
[2026-01-13 20:21:18] 2026-01-14 01:20:44,533 | INFO     | chi2: 1.094572676074633
[2026-01-13 20:21:18] 2026-01-14 01:20:44,533 | INFO     | current chi2=1.094572676074633 (change=57.606467051370046 %)
[2026-01-13 20:21:18] 2026-01-14 01:20:44,533 | INFO     | sum of square deviations: 4024152432.995747
[2026-01-13 20:21:18] 2026-01-14 01:20:44,535 | INFO     | sum of deviations: -16913648606.046806
[2026-01-13 20:21:18] 2026-01-14 01:20:44,535 | INFO     | mean x: 1768346488.0042553
[2026-01-13 20:21:18] 2026-01-14 01:20:44,535 | INFO     | mean y: 2532596.0468085106
[2026-01-13 20:21:18] 2026-01-14 01:20:44,535 | INFO     | intersect: 7434952617.366748
[2026-01-13 20:21:18] 2026-01-14 01:20:44,536 | INFO     | chi2: 1.030566164355726
[2026-01-13 20:21:18] 2026-01-14 01:20:44,536 | INFO     | current chi2=1.030566164355726 (change=5.847625572789538 %)
[2026-01-13 20:21:18] 2026-01-14 01:20:44,536 | INFO     | left removable region: 20
[2026-01-13 20:21:18] 2026-01-14 01:20:44,536 | INFO     | sum of square deviations: 3038859601.4953437
[2026-01-13 20:21:18] 2026-01-14 01:20:44,537 | INFO     | sum of deviations: 104235451.41120842
[2026-01-13 20:21:18] 2026-01-14 01:20:44,538 | INFO     | mean x: 1768346457.504673
[2026-01-13 20:21:18] 2026-01-14 01:20:44,538 | INFO     | mean y: 2543279.5887850467
[2026-01-13 20:21:18] 2026-01-14 01:20:44,538 | INFO     | intersect: -58112497.71619793
[2026-01-13 20:21:18] 2026-01-14 01:20:44,538 | INFO     | chi2: 0.013070770483482924
[2026-01-13 20:21:18] 2026-01-14 01:20:44,538 | INFO     | current memory leak: 0.03 B/s (using 214 data points, chi2=0.01)
[2026-01-13 20:21:18] 2026-01-14 01:20:44,539 | INFO     | could have reported an average CPU frequency of 3207 MHz (12 samples)
[2026-01-13 20:21:18] 2026-01-14 01:20:44,539 | INFO     | ..............................
[2026-01-13 20:21:18] 2026-01-14 01:20:44,539 | INFO     | . Timing measurements:
[2026-01-13 20:21:18] 2026-01-14 01:20:44,539 | INFO     | . get job = 0 s
[2026-01-13 20:21:18] 2026-01-14 01:20:44,539 | INFO     | . initial setup = 2 s
[2026-01-13 20:21:18] 2026-01-14 01:20:44,540 | INFO     | . payload setup = 12 s
[2026-01-13 20:21:18] 2026-01-14 01:20:44,540 | INFO     | . stage-in = 0 s
[2026-01-13 20:21:18] 2026-01-14 01:20:44,540 | INFO     | . payload execution = 14898 s
[2026-01-13 20:21:18] 2026-01-14 01:20:44,540 | INFO     | . stage-out = 3 s
[2026-01-13 20:21:18] 2026-01-14 01:20:44,540 | INFO     | . log creation = 0 s
[2026-01-13 20:21:18] 2026-01-14 01:20:44,540 | INFO     | ..............................
[2026-01-13 20:21:18] 2026-01-14 01:20:44,889 | INFO     | PID=3222579 has CPU usage=11.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-13 20:21:18] 2026-01-14 01:20:44,889 | INFO     | .. there are 24 such processes running
[2026-01-13 20:21:18] 2026-01-14 01:20:45,147 | INFO     | 
[2026-01-13 20:21:18] 2026-01-14 01:20:45,147 | INFO     | job summary report
[2026-01-13 20:21:18] 2026-01-14 01:20:45,147 | INFO     | --------------------------------------------------
[2026-01-13 20:21:18] 2026-01-14 01:20:45,147 | INFO     | PanDA job id: 6969171048
[2026-01-13 20:21:18] 2026-01-14 01:20:45,147 | INFO     | task id: 48213025
[2026-01-13 20:21:18] 2026-01-14 01:20:45,147 | INFO     | errors: (none)
[2026-01-13 20:21:18] 2026-01-14 01:20:45,147 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 20:21:18] 2026-01-14 01:20:45,147 | INFO     | pilot state: finished 
[2026-01-13 20:21:18] 2026-01-14 01:20:45,148 | INFO     | transexitcode: 0
[2026-01-13 20:21:18] 2026-01-14 01:20:45,148 | INFO     | exeerrorcode: 0
[2026-01-13 20:21:18] 2026-01-14 01:20:45,148 | INFO     | exeerrordiag: 
[2026-01-13 20:21:18] 2026-01-14 01:20:45,148 | INFO     | exitcode: 0
[2026-01-13 20:21:18] 2026-01-14 01:20:45,148 | INFO     | exitmsg: OK
[2026-01-13 20:21:18] 2026-01-14 01:20:45,148 | INFO     | cpuconsumptiontime: 30800 s
[2026-01-13 20:21:18] 2026-01-14 01:20:45,148 | INFO     | nevents: 400
[2026-01-13 20:21:18] 2026-01-14 01:20:45,148 | INFO     | neventsw: 0
[2026-01-13 20:21:18] 2026-01-14 01:20:45,148 | INFO     | pid: 3235567
[2026-01-13 20:21:18] 2026-01-14 01:20:45,148 | INFO     | pgrp: 3235567
[2026-01-13 20:21:18] 2026-01-14 01:20:45,148 | INFO     | corecount: 8
[2026-01-13 20:21:18] 2026-01-14 01:20:45,148 | INFO     | event service: False
[2026-01-13 20:21:18] 2026-01-14 01:20:45,148 | INFO     | sizes: {0: 2283945, 1: 2284144, 9: 2284406, 11: 2284434, 14914: 2315801, 14915: 2315800, 14919: 2325038, 14930: 2325176}
[2026-01-13 20:21:18] 2026-01-14 01:20:45,148 | INFO     | --------------------------------------------------
[2026-01-13 20:21:18] 2026-01-14 01:20:45,149 | INFO     | 
[2026-01-13 20:21:18] 2026-01-14 01:20:45,149 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-13 20:21:18] 2026-01-14 01:20:45,172 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 20:21:18] 2026-01-14 01:20:45,173 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 20:21:18] 2026-01-14 01:20:45,173 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 20:21:18] 2026-01-14 01:20:45,173 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 20:21:18] 2026-01-14 01:20:45,173 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 20:21:18] 2026-01-14 01:20:45,173 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 20:21:18] 2026-01-14 01:20:45,174 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 20:21:18] 2026-01-14 01:20:45,174 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 20:21:18] 2026-01-14 01:20:45,174 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 20:21:18] 2026-01-14 01:20:45,174 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 20:21:18] 2026-01-14 01:20:45,174 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 20:21:18] 2026-01-14 01:20:45,174 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 20:21:18] 2026-01-14 01:20:45,174 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 20:21:18] 2026-01-14 01:20:45,174 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 20:21:18] 2026-01-14 01:20:45,174 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 20:21:18] 2026-01-14 01:20:45,174 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 20:21:18] 2026-01-14 01:20:45,174 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 20:21:18] 2026-01-14 01:20:45,174 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 20:21:18] 2026-01-14 01:20:45,174 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 20:21:18] 2026-01-14 01:20:45,175 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 20:21:18] 2026-01-14 01:20:45,175 | INFO     | job 6969171048 has completed (purged errors)
[2026-01-13 20:21:18] 2026-01-14 01:20:45,175 | INFO     | overall cleanup function is called
[2026-01-13 20:21:18] 2026-01-14 01:20:46,185 | INFO     | --- collectZombieJob: --- 10, [3235567]
[2026-01-13 20:21:18] 2026-01-14 01:20:46,185 | INFO     | zombie collector waiting for pid 3235567
[2026-01-13 20:21:18] 2026-01-14 01:20:46,186 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 20:21:18] 2026-01-14 01:20:46,186 | INFO     | collected zombie processes
[2026-01-13 20:21:18] 2026-01-14 01:20:46,186 | INFO     | will attempt to kill all subprocesses of pid=3235567
[2026-01-13 20:21:18] 2026-01-14 01:20:46,677 | INFO     | process IDs to be killed: [3235567] (in reverse order)
[2026-01-13 20:21:18] 2026-01-14 01:20:46,880 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 20:21:18] 2026-01-14 01:20:46,881 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 20:21:18] 2026-01-14 01:20:46,916 | INFO     | did not find any defunct processes belonging to 3235567
[2026-01-13 20:21:18] 2026-01-14 01:20:46,935 | INFO     | did not find any defunct processes belonging to 3235567
[2026-01-13 20:21:18] 2026-01-14 01:20:46,935 | INFO     | ready for new job
[2026-01-13 20:21:18] 2026-01-14 01:20:46,936 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 20:21:18] 2026-01-14 01:20:46,938 | INFO     | ***************************************
[2026-01-13 20:21:18] 2026-01-14 01:20:46,939 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 20:21:18] 2026-01-14 01:20:46,939 | INFO     | ***************************************
[2026-01-13 20:21:18] 2026-01-14 01:20:46,939 | INFO     | 
[2026-01-13 20:21:18] 2026-01-14 01:20:46,943 | INFO     | architecture information:
[2026-01-13 20:21:18] 2026-01-14 01:20:46,943 | INFO     | executing command: cat /etc/os-release
[2026-01-13 20:21:18] 2026-01-14 01:20:46,967 | INFO     | cat /etc/os-release:
[2026-01-13 20:21:18] NAME="CentOS Linux"
[2026-01-13 20:21:18] VERSION="7 (Core)"
[2026-01-13 20:21:18] ID="centos"
[2026-01-13 20:21:18] ID_LIKE="rhel fedora"
[2026-01-13 20:21:18] VERSION_ID="7"
[2026-01-13 20:21:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 20:21:18] ANSI_COLOR="0;31"
[2026-01-13 20:21:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 20:21:18] HOME_URL="https://www.centos.org/"
[2026-01-13 20:21:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 20:21:18] 
[2026-01-13 20:21:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 20:21:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 20:21:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 20:21:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 20:21:18] 
[2026-01-13 20:21:18] 2026-01-14 01:20:46,968 | INFO     | ***************************************
[2026-01-13 20:21:18] 2026-01-14 01:20:47,489 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-13 20:21:18] 2026-01-14 01:20:47,572 | INFO     | sufficient remaining disk space (123461435392 B)
[2026-01-13 20:21:18] 2026-01-14 01:20:47,572 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 20:21:18] 2026-01-14 01:20:47,573 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 20:21:18] 2026-01-14 01:20:47,573 | INFO     | update_server=False
[2026-01-13 20:21:18] 2026-01-14 01:20:47,573 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 20:21:18] 2026-01-14 01:20:47,665 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-13 20:21:18] 2026-01-14 01:20:47,666 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-13 20:21:18] 2026-01-14 01:20:47,666 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 20:21:18] 2026-01-14 01:20:47,666 | INFO     | will abort loop
[2026-01-13 20:21:18] 2026-01-14 01:20:48,106 | INFO     | all job control threads have been joined
[2026-01-13 20:21:18] 2026-01-14 01:20:48,296 | INFO     | all data control threads have been joined
[2026-01-13 20:21:18] 2026-01-14 01:20:48,578 | INFO     | [job] retrieve thread has finished
[2026-01-13 20:21:18] 2026-01-14 01:20:48,668 | INFO     | all payload control threads have been joined
[2026-01-13 20:21:18] 2026-01-14 01:20:48,671 | INFO     | [job] job monitor thread has finished
[2026-01-13 20:21:18] 2026-01-14 01:20:48,691 | INFO     | [job] validate thread has finished
[2026-01-13 20:21:18] 2026-01-14 01:20:48,718 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 20:21:18] 2026-01-14 01:20:48,729 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 20:21:18] 2026-01-14 01:20:48,735 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 20:21:18] 2026-01-14 01:20:49,066 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 20:21:18] 2026-01-14 01:20:49,112 | INFO     | [job] control thread has finished
[2026-01-13 20:21:18] 2026-01-14 01:20:49,229 | INFO     | [payload] failed_post thread has finished
[2026-01-13 20:21:18] 2026-01-14 01:20:49,302 | INFO     | [data] control thread has finished
[2026-01-13 20:21:18] 2026-01-14 01:20:49,652 | INFO     | [data] copytool_in thread has finished
[2026-01-13 20:21:18] 2026-01-14 01:20:49,658 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 20:21:18] 2026-01-14 01:20:49,674 | INFO     | [payload] control thread has finished
[2026-01-13 20:21:18] 2026-01-14 01:20:49,693 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 20:21:18] 2026-01-14 01:20:49,694 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 20:21:18] 2026-01-14 01:20:49,828 | INFO     | [payload] validate_post thread has finished
[2026-01-13 20:21:18] 2026-01-14 01:20:50,700 | INFO     | [job] queue monitor thread has finished
[2026-01-13 20:21:18] 2026-01-14 01:20:51,072 | INFO     | [data] copytool_out thread has finished
[2026-01-13 20:21:18] 2026-01-14 01:20:52,744 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 20:21:18] 2026-01-14 01:21:00,264 | INFO     | [monitor] cgroup control has ended
[2026-01-13 20:21:18] 2026-01-14 01:21:01,429 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140108521953088)>', '<ExcThread(monitor, started 140108065924864)>']
[2026-01-13 20:21:18] 2026-01-14 01:21:06,455 | INFO     | all workflow threads have been joined
[2026-01-13 20:21:18] 2026-01-14 01:21:06,455 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 20:21:18] 2026-01-14 01:21:06,456 | INFO     | traces error code: 0
[2026-01-13 20:21:18] 2026-01-14 01:21:06,456 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 20:21:18] 2026-01-14 01:21:17,589 | INFO     | PID=3222579 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 20:21:18] 2026-01-14 01:21:17,589 | INFO     | .. there are 24 such processes running
[2026-01-13 20:21:18] 2026-01-14 01:21:17,590 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 20:21:18] 2026-01-14 01:21:17,590 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 20:21:18] 2026-01-14 01:21:17,590 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 20:21:18] 2026-01-14 01:21:17,590 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 20:21:18] 2026-01-14 01:21:17,590 | INFO     | [monitor] control thread has ended
[2026-01-13 20:21:18] 2026-01-14 01:21:18,023 [wrapper] ==== pilot stdout END ====
[2026-01-13 20:21:18] 2026-01-14 01:21:18,026 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 20:21:18] 2026-01-14 01:21:18,048 [wrapper] pilotpid: 3222579
[2026-01-13 20:21:18] 2026-01-14 01:21:18,051 [wrapper] Pilot exit status: 0
[2026-01-13 20:21:18] 2026-01-14 01:21:18,115 [wrapper] pandaids: 6969171048
[2026-01-13 20:21:18] 2026-01-14 01:21:18,400 [wrapper] cleanup supervisor_pilot 4102711 3222580
[2026-01-13 20:21:18] 2026-01-14 01:21:18,417 [wrapper] Test setup, not cleaning
[2026-01-13 20:21:18] 2026-01-14 01:21:18,448 [wrapper] apfmon messages muted
[2026-01-13 20:21:18] 2026-01-14 01:21:18,471 [wrapper] ==== wrapper stdout END ====
[2026-01-13 20:21:18] 2026-01-14 01:21:18,494 [wrapper] ==== wrapper stderr END ====
[2026-01-13 20:21:18]  *** Error codes and diagnostics ***
[2026-01-13 20:21:18]     "exeErrorCode": 0,
[2026-01-13 20:21:18]     "exeErrorDiag": "",
[2026-01-13 20:21:18]     "pilotErrorCode": 0,
[2026-01-13 20:21:18]     "pilotErrorDiag": "",
[2026-01-13 20:21:18]  *** Listing of results directory ***
[2026-01-13 20:21:18] total 496388
[2026-01-13 20:21:18] -rw-r--r--. 1 boincer umatlas      5112 Jan 13 16:09 queuedata.json
[2026-01-13 20:21:18] -rwx------. 1 boincer umatlas     36322 Jan 13 16:10 runpilot2-wrapper.sh
[2026-01-13 20:21:18] -rw-r--r--. 1 boincer umatlas    579449 Jan 13 16:10 pilot3.tar.gz
[2026-01-13 20:21:18] -rw-r--r--. 1 boincer umatlas       100 Jan 13 16:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 20:21:18] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 13 16:11 run_atlas
[2026-01-13 20:21:18] -rw-r--r--. 1 boincer umatlas       105 Jan 13 16:11 job.xml
[2026-01-13 20:21:18] -rw-r--r--. 2 boincer umatlas 292055442 Jan 13 16:11 EVNT.48213021._000005.pool.root.1
[2026-01-13 20:21:18] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 16:11 start_atlas.sh
[2026-01-13 20:21:18] drwxrwx--x. 2 boincer umatlas      4096 Jan 13 16:11 shared
[2026-01-13 20:21:18] -rw-r--r--. 2 boincer umatlas    592399 Jan 13 16:11 input.tar.gz
[2026-01-13 20:21:18] -rw-r--r--. 1 boincer umatlas         0 Jan 13 16:11 boinc_lockfile
[2026-01-13 20:21:18] -rw-r--r--. 1 boincer umatlas      2625 Jan 13 16:11 pandaJob.out
[2026-01-13 20:21:18] -rw-------. 1 boincer umatlas        57 Jan 13 16:11 setup.sh.local
[2026-01-13 20:21:18] -rw-------. 1 boincer umatlas    997226 Jan 13 16:11 agis_schedconf.cvmfs.json
[2026-01-13 20:21:18] drwx------. 5 boincer umatlas      4096 Jan 13 16:11 pilot3
[2026-01-13 20:21:18] -rw-r--r--. 1 boincer umatlas      6957 Jan 13 20:18 init_data.xml
[2026-01-13 20:21:18] -rw-------. 1 boincer umatlas 207336250 Jan 13 20:19 HITS.48213025._000103.pool.root.1
[2026-01-13 20:21:18] -rw-r--r--. 1 boincer umatlas       530 Jan 13 20:19 boinc_task_state.xml
[2026-01-13 20:21:18] -rw-------. 1 boincer umatlas      1046 Jan 13 20:20 memory_monitor_summary.json
[2026-01-13 20:21:18] -rw-------. 1 boincer umatlas   1516246 Jan 13 20:20 agis_ddmendpoints.agis.ALL.json
[2026-01-13 20:21:18] -rw-------. 1 boincer umatlas    479945 Jan 13 20:20 log.48213025._000103.job.log.tgz.1
[2026-01-13 20:21:18] -rw-------. 1 boincer umatlas      7785 Jan 13 20:20 heartbeat.json
[2026-01-13 20:21:18] -rw-r--r--. 1 boincer umatlas        28 Jan 13 20:21 wrapper_checkpoint.txt
[2026-01-13 20:21:18] -rw-------. 1 boincer umatlas        95 Jan 13 20:21 pilot_heartbeat.json
[2026-01-13 20:21:18] -rw-------. 1 boincer umatlas       823 Jan 13 20:21 pilotlog.txt
[2026-01-13 20:21:18] -rw-------. 1 boincer umatlas   2012657 Jan 13 20:21 log.48213025._000103.job.log.1
[2026-01-13 20:21:18] -rw-r--r--. 1 boincer umatlas      8192 Jan 13 20:21 boinc_mmap_file
[2026-01-13 20:21:18] -rw-------. 1 boincer umatlas       357 Jan 13 20:21 output.list
[2026-01-13 20:21:18] -rw-r--r--. 1 boincer umatlas       620 Jan 13 20:21 runtime_log
[2026-01-13 20:21:18] -rw-------. 1 boincer umatlas   2508800 Jan 13 20:21 result.tar.gz
[2026-01-13 20:21:18] -rw-r--r--. 1 boincer umatlas      9338 Jan 13 20:21 runtime_log.err
[2026-01-13 20:21:18] -rw-------. 1 boincer umatlas       658 Jan 13 20:21 DwTMDmnp0z8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmdBiKDmDJVGPn.diag
[2026-01-13 20:21:18] -rw-r--r--. 1 boincer umatlas     21255 Jan 13 20:21 stderr.txt
[2026-01-13 20:21:18] HITS file was successfully produced:
[2026-01-13 20:21:18] -rw-------. 1 boincer umatlas 207336250 Jan 13 20:19 shared/HITS.pool.root.1
[2026-01-13 20:21:18]  *** Contents of shared directory: ***
[2026-01-13 20:21:18] total 490748
[2026-01-13 20:21:18] -rw-r--r--. 2 boincer umatlas 292055442 Jan 13 16:11 ATLAS.root_0
[2026-01-13 20:21:18] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 16:11 start_atlas.sh
[2026-01-13 20:21:18] -rw-r--r--. 2 boincer umatlas    592399 Jan 13 16:11 input.tar.gz
[2026-01-13 20:21:18] -rw-------. 1 boincer umatlas 207336250 Jan 13 20:19 HITS.pool.root.1
[2026-01-13 20:21:18] -rw-------. 1 boincer umatlas   2508800 Jan 13 20:21 result.tar.gz
20:21:40 (3217836): run_atlas exited; CPU time 31325.569570
20:21:40 (3217836): called boinc_finish(0)

</stderr_txt>
]]>

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