Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:20:23 (12078): wrapper (7.7.26015): starting
16:20:23 (12078): wrapper: running run_atlas (--nthreads 8)
[2026-01-13 16:20:23] Arguments: --nthreads 8
[2026-01-13 16:20:23] Threads: 8
[2026-01-13 16:20:23] Checking for CVMFS
[2026-01-13 16:20:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-13 16:20:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-13 16:20:24] Running cvmfs_config stat atlas.cern.ch
[2026-01-13 16:20:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-13 16:20:24] 2.13.3.0 7219 29174 152448 155104 1 21 38582673 40960000 20000 16776704 0 45642575 99.733 28638301 37443 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-13 16:20:24] CVMFS is ok
[2026-01-13 16:20:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 16:20:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 16:20:24] Further information can be found at the LHC@home message board.
[2026-01-13 16:20:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 16:20:24] Checking for apptainer binary...
[2026-01-13 16:20:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-13 16:20:24] Running /usr/bin/apptainer --version
[2026-01-13 16:20:24] apptainer version 1.4.5-2.el9
[2026-01-13 16:20:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 16:20:25] c-212-13.aglt2.org
[2026-01-13 16:20:25] apptainer works
[2026-01-13 16:20:25] Set ATHENA_PROC_NUMBER=8
[2026-01-13 16:20:25] Set ATHENA_CORE_NUMBER=8
[2026-01-13 16:20:25] Starting ATLAS job with PandaID=6969150618
[2026-01-13 16:20:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 18:59:26]  *** The last 200 lines of the pilot log: ***
[2026-01-13 18:59:26] 2026-01-13 23:50:16,909 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 18:59:26] 2026-01-13 23:50:18,757 | INFO     | time since job start (8970s) is within the limit (349056.0s)
[2026-01-13 18:59:26] 2026-01-13 23:50:19,414 | INFO     | monitor loop #616: job 0:6969150618 is in state 'finished'
[2026-01-13 18:59:26] 2026-01-13 23:50:19,424 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 18:59:26] 2026-01-13 23:50:20,767 | INFO     | time since job start (8972s) is within the limit (349056.0s)
[2026-01-13 18:59:26] 2026-01-13 23:50:21,931 | INFO     | monitor loop #617: job 0:6969150618 is in state 'finished'
[2026-01-13 18:59:26] 2026-01-13 23:50:21,931 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 18:59:26] 2026-01-13 23:50:22,774 | INFO     | time since job start (8974s) is within the limit (349056.0s)
[2026-01-13 18:59:26] 2026-01-13 23:50:22,899 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-13 18:59:26] 2026-01-13 23:50:22,918 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3221.009666666665
[2026-01-13 18:59:26] 2026-01-13 23:50:22,932 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6969150618/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 18:59:26] 2026-01-13 23:50:22,933 | INFO     | extracted standard info from prmon json
[2026-01-13 18:59:26] 2026-01-13 23:50:22,933 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 18:59:26] 2026-01-13 23:50:22,933 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 18:59:26] 2026-01-13 23:50:22,933 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 18:59:26] 2026-01-13 23:50:22,933 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 18:59:26] 2026-01-13 23:50:22,936 | INFO     | fitting pss+swap vs Time
[2026-01-13 18:59:26] 2026-01-13 23:50:22,936 | INFO     | sum of square deviations: 964992532.1643844
[2026-01-13 18:59:26] 2026-01-13 23:50:22,937 | INFO     | sum of deviations: -6448885655.91781
[2026-01-13 18:59:26] 2026-01-13 23:50:22,937 | INFO     | mean x: 1768343760.5479453
[2026-01-13 18:59:26] 2026-01-13 23:50:22,937 | INFO     | mean y: 2556142.2739726026
[2026-01-13 18:59:26] 2026-01-13 23:50:22,937 | INFO     | intersect: 11820105327.397392
[2026-01-13 18:59:26] 2026-01-13 23:50:22,937 | INFO     | chi2: 3.3228840553023953
[2026-01-13 18:59:26] 2026-01-13 23:50:22,937 | INFO     | sum of square deviations: 869206824.6524805
[2026-01-13 18:59:26] 2026-01-13 23:50:22,938 | INFO     | sum of deviations: 3861847875.3120546
[2026-01-13 18:59:26] 2026-01-13 23:50:22,938 | INFO     | mean x: 1768343608.0496454
[2026-01-13 18:59:26] 2026-01-13 23:50:22,938 | INFO     | mean y: 2572128.2411347516
[2026-01-13 18:59:26] 2026-01-13 23:50:22,938 | INFO     | intersect: -7854101119.001861
[2026-01-13 18:59:26] 2026-01-13 23:50:22,938 | INFO     | chi2: 2.5870210664200495
[2026-01-13 18:59:26] 2026-01-13 23:50:22,939 | INFO     | current chi2=2.5870210664200495 (change=22.145310418162616 %)
[2026-01-13 18:59:26] 2026-01-13 23:50:22,939 | INFO     | right removable region: 140
[2026-01-13 18:59:26] 2026-01-13 23:50:22,939 | INFO     | sum of square deviations: 869202554.6524805
[2026-01-13 18:59:26] 2026-01-13 23:50:22,939 | INFO     | sum of deviations: -37939913981.65956
[2026-01-13 18:59:26] 2026-01-13 23:50:22,939 | INFO     | mean x: 1768343913.0496454
[2026-01-13 18:59:26] 2026-01-13 23:50:22,939 | INFO     | mean y: 2605778.8085106383
[2026-01-13 18:59:26] 2026-01-13 23:50:22,939 | INFO     | intersect: 77189235744.38506
[2026-01-13 18:59:26] 2026-01-13 23:50:22,940 | INFO     | chi2: 1.1503813052385898
[2026-01-13 18:59:26] 2026-01-13 23:50:22,940 | INFO     | current chi2=1.1503813052385898 (change=65.38003475014716 %)
[2026-01-13 18:59:26] 2026-01-13 23:50:22,940 | INFO     | sum of square deviations: 779970839.6397029
[2026-01-13 18:59:26] 2026-01-13 23:50:22,941 | INFO     | sum of deviations: -42238947580.2647
[2026-01-13 18:59:26] 2026-01-13 23:50:22,941 | INFO     | mean x: 1768344065.5514705
[2026-01-13 18:59:26] 2026-01-13 23:50:22,941 | INFO     | mean y: 2613043.3235294116
[2026-01-13 18:59:26] 2026-01-13 23:50:22,941 | INFO     | intersect: 95766439705.36151
[2026-01-13 18:59:26] 2026-01-13 23:50:22,941 | INFO     | chi2: 1.0481165320536834
[2026-01-13 18:59:26] 2026-01-13 23:50:22,941 | INFO     | current chi2=1.0481165320536834 (change=8.88964143621029 %)
[2026-01-13 18:59:26] 2026-01-13 23:50:22,941 | INFO     | left removable region: 20
[2026-01-13 18:59:26] 2026-01-13 23:50:22,941 | INFO     | sum of square deviations: 535797111.5916666
[2026-01-13 18:59:26] 2026-01-13 23:50:22,942 | INFO     | sum of deviations: -24228897881.175007
[2026-01-13 18:59:26] 2026-01-13 23:50:22,942 | INFO     | mean x: 1768344187.5583334
[2026-01-13 18:59:26] 2026-01-13 23:50:22,942 | INFO     | mean y: 2618133.525
[2026-01-13 18:59:26] 2026-01-13 23:50:22,942 | INFO     | intersect: 79967645589.23969
[2026-01-13 18:59:26] 2026-01-13 23:50:22,942 | INFO     | chi2: 0.23140827198549024
[2026-01-13 18:59:26] 2026-01-13 23:50:22,942 | INFO     | current memory leak: -45.22 B/s (using 120 data points, chi2=0.23)
[2026-01-13 18:59:26] 2026-01-13 23:50:22,942 | INFO     | could have reported an average CPU frequency of 3166 MHz (8 samples)
[2026-01-13 18:59:26] 2026-01-13 23:50:22,943 | INFO     | ..............................
[2026-01-13 18:59:26] 2026-01-13 23:50:22,943 | INFO     | . Timing measurements:
[2026-01-13 18:59:26] 2026-01-13 23:50:22,943 | INFO     | . get job = 0 s
[2026-01-13 18:59:26] 2026-01-13 23:50:22,943 | INFO     | . initial setup = 3 s
[2026-01-13 18:59:26] 2026-01-13 23:50:22,943 | INFO     | . payload setup = 26 s
[2026-01-13 18:59:26] 2026-01-13 23:50:22,943 | INFO     | . stage-in = 0 s
[2026-01-13 18:59:26] 2026-01-13 23:50:22,943 | INFO     | . payload execution = 8883 s
[2026-01-13 18:59:26] 2026-01-13 23:50:22,943 | INFO     | . stage-out = 1 s
[2026-01-13 18:59:26] 2026-01-13 23:50:22,943 | INFO     | . log creation = 0 s
[2026-01-13 18:59:26] 2026-01-13 23:50:22,943 | INFO     | ..............................
[2026-01-13 18:59:26] 2026-01-13 23:50:23,072 | INFO     | 
[2026-01-13 18:59:26] 2026-01-13 23:50:23,078 | INFO     | job summary report
[2026-01-13 18:59:26] 2026-01-13 23:50:23,078 | INFO     | --------------------------------------------------
[2026-01-13 18:59:26] 2026-01-13 23:50:23,079 | INFO     | PanDA job id: 6969150618
[2026-01-13 18:59:26] 2026-01-13 23:50:23,079 | INFO     | task id: 48213183
[2026-01-13 18:59:26] 2026-01-13 23:50:23,079 | INFO     | errors: (none)
[2026-01-13 18:59:26] 2026-01-13 23:50:23,079 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 18:59:26] 2026-01-13 23:50:23,079 | INFO     | pilot state: finished 
[2026-01-13 18:59:26] 2026-01-13 23:50:23,079 | INFO     | transexitcode: 0
[2026-01-13 18:59:26] 2026-01-13 23:50:23,079 | INFO     | exeerrorcode: 0
[2026-01-13 18:59:26] 2026-01-13 23:50:23,079 | INFO     | exeerrordiag: 
[2026-01-13 18:59:26] 2026-01-13 23:50:23,079 | INFO     | exitcode: 0
[2026-01-13 18:59:26] 2026-01-13 23:50:23,079 | INFO     | exitmsg: OK
[2026-01-13 18:59:26] 2026-01-13 23:50:23,079 | INFO     | cpuconsumptiontime: 33021 s
[2026-01-13 18:59:26] 2026-01-13 23:50:23,079 | INFO     | nevents: 400
[2026-01-13 18:59:26] 2026-01-13 23:50:23,079 | INFO     | neventsw: 0
[2026-01-13 18:59:26] 2026-01-13 23:50:23,079 | INFO     | pid: 23073
[2026-01-13 18:59:26] 2026-01-13 23:50:23,079 | INFO     | pgrp: 23073
[2026-01-13 18:59:26] 2026-01-13 23:50:23,079 | INFO     | corecount: 8
[2026-01-13 18:59:26] 2026-01-13 23:50:23,079 | INFO     | event service: False
[2026-01-13 18:59:26] 2026-01-13 23:50:23,080 | INFO     | sizes: {0: 2283279, 1: 2284135, 12: 2284135, 14: 2284425, 23: 2284453, 8913: 2312713, 8915: 2321711, 8917: 2321767, 8928: 2321961}
[2026-01-13 18:59:26] 2026-01-13 23:50:23,080 | INFO     | --------------------------------------------------
[2026-01-13 18:59:26] 2026-01-13 23:50:23,080 | INFO     | 
[2026-01-13 18:59:26] 2026-01-13 23:50:23,080 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-13 18:59:26] 2026-01-13 23:50:23,273 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 18:59:26] 2026-01-13 23:50:23,273 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 18:59:26] 2026-01-13 23:50:23,273 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 18:59:26] 2026-01-13 23:50:23,273 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 18:59:26] 2026-01-13 23:50:23,274 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 18:59:26] 2026-01-13 23:50:23,274 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 18:59:26] 2026-01-13 23:50:23,274 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 18:59:26] 2026-01-13 23:50:23,274 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 18:59:26] 2026-01-13 23:50:23,274 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 18:59:26] 2026-01-13 23:50:23,274 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 18:59:26] 2026-01-13 23:50:23,274 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 18:59:26] 2026-01-13 23:50:23,274 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 18:59:26] 2026-01-13 23:50:23,274 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 18:59:26] 2026-01-13 23:50:23,274 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 18:59:26] 2026-01-13 23:50:23,274 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 18:59:26] 2026-01-13 23:50:23,275 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 18:59:26] 2026-01-13 23:50:23,275 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 18:59:26] 2026-01-13 23:50:23,275 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 18:59:26] 2026-01-13 23:50:23,275 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 18:59:26] 2026-01-13 23:50:23,275 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 18:59:26] 2026-01-13 23:50:23,275 | INFO     | job 6969150618 has completed (purged errors)
[2026-01-13 18:59:26] 2026-01-13 23:50:23,275 | INFO     | overall cleanup function is called
[2026-01-13 18:59:26] 2026-01-13 23:50:24,284 | INFO     | --- collectZombieJob: --- 10, [23073]
[2026-01-13 18:59:26] 2026-01-13 23:50:24,286 | INFO     | zombie collector waiting for pid 23073
[2026-01-13 18:59:26] 2026-01-13 23:50:24,286 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 18:59:26] 2026-01-13 23:50:24,287 | INFO     | collected zombie processes
[2026-01-13 18:59:26] 2026-01-13 23:50:24,287 | INFO     | will attempt to kill all subprocesses of pid=23073
[2026-01-13 18:59:26] 2026-01-13 23:50:25,035 | INFO     | process IDs to be killed: [23073] (in reverse order)
[2026-01-13 18:59:26] 2026-01-13 23:50:25,684 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 18:59:26] 2026-01-13 23:50:25,685 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 18:59:26] 2026-01-13 23:50:25,713 | INFO     | did not find any defunct processes belonging to 23073
[2026-01-13 18:59:26] 2026-01-13 23:50:25,727 | INFO     | did not find any defunct processes belonging to 23073
[2026-01-13 18:59:26] 2026-01-13 23:50:25,728 | INFO     | ready for new job
[2026-01-13 18:59:26] 2026-01-13 23:50:25,728 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 18:59:26] 2026-01-13 23:50:25,730 | INFO     | ***************************************
[2026-01-13 18:59:26] 2026-01-13 23:50:25,730 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 18:59:26] 2026-01-13 23:50:25,730 | INFO     | ***************************************
[2026-01-13 18:59:26] 2026-01-13 23:50:25,730 | INFO     | 
[2026-01-13 18:59:26] 2026-01-13 23:50:25,754 | INFO     | architecture information:
[2026-01-13 18:59:26] 2026-01-13 23:50:25,774 | INFO     | executing command: cat /etc/os-release
[2026-01-13 18:59:26] 2026-01-13 23:50:25,814 | INFO     | cat /etc/os-release:
[2026-01-13 18:59:26] NAME="CentOS Linux"
[2026-01-13 18:59:26] VERSION="7 (Core)"
[2026-01-13 18:59:26] ID="centos"
[2026-01-13 18:59:26] ID_LIKE="rhel fedora"
[2026-01-13 18:59:26] VERSION_ID="7"
[2026-01-13 18:59:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 18:59:26] ANSI_COLOR="0;31"
[2026-01-13 18:59:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 18:59:26] HOME_URL="https://www.centos.org/"
[2026-01-13 18:59:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 18:59:26] 
[2026-01-13 18:59:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 18:59:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 18:59:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 18:59:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 18:59:26] 
[2026-01-13 18:59:26] 2026-01-13 23:50:25,814 | INFO     | ***************************************
[2026-01-13 18:59:26] 2026-01-13 23:50:26,317 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-13 18:59:26] 2026-01-13 23:50:26,415 | INFO     | sufficient remaining disk space (122467385344 B)
[2026-01-13 18:59:26] 2026-01-13 23:50:26,416 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 18:59:26] 2026-01-13 23:50:26,416 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 18:59:26] 2026-01-13 23:50:26,416 | INFO     | update_server=False
[2026-01-13 18:59:26] 2026-01-13 23:50:26,416 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 18:59:26] 2026-01-13 23:50:26,416 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 18:59:26] 2026-01-13 23:50:26,416 | INFO     | aborting loop
[2026-01-13 18:59:26] 2026-01-13 23:50:26,417 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 18:59:26] 2026-01-13 23:50:26,528 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 18:59:26] 2026-01-13 23:50:26,552 | INFO     | all payload control threads have been joined
[2026-01-13 18:59:26] 2026-01-13 23:50:26,600 | INFO     | all data control threads have been joined
[2026-01-13 18:59:26] 2026-01-13 23:50:27,309 | INFO     | all job control threads have been joined
[2026-01-13 18:59:26] 2026-01-13 23:50:27,422 | INFO     | [job] retrieve thread has finished
[2026-01-13 18:59:26] 2026-01-13 23:50:27,435 | INFO     | [job] job monitor thread has finished
[2026-01-13 18:59:26] 2026-01-13 23:50:27,558 | INFO     | [payload] control thread has finished
[2026-01-13 18:59:26] 2026-01-13 23:50:27,606 | INFO     | [data] control thread has finished
[2026-01-13 18:59:26] 2026-01-13 23:50:27,668 | INFO     | [job] validate thread has finished
[2026-01-13 18:59:26] 2026-01-13 23:50:27,802 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 18:59:26] 2026-01-13 23:50:27,971 | INFO     | [payload] failed_post thread has finished
[2026-01-13 18:59:26] 2026-01-13 23:50:28,084 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 18:59:26] 2026-01-13 23:50:28,315 | INFO     | [job] control thread has finished
[2026-01-13 18:59:26] 2026-01-13 23:50:28,373 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 18:59:26] 2026-01-13 23:50:28,432 | INFO     | [data] copytool_out thread has finished
[2026-01-13 18:59:26] 2026-01-13 23:50:28,645 | INFO     | [payload] validate_post thread has finished
[2026-01-13 18:59:26] 2026-01-13 23:50:28,789 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 18:59:26] 2026-01-13 23:50:28,819 | INFO     | [data] copytool_in thread has finished
[2026-01-13 18:59:26] 2026-01-13 23:50:28,824 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 18:59:26] 2026-01-13 23:50:29,090 | INFO     | [job] queue monitor thread has finished
[2026-01-13 18:59:26] 2026-01-13 23:50:30,537 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 18:59:26] 2026-01-13 23:50:44,937 [wrapper] supervise_pilot (15 min periods counter: 11)
[2026-01-13 18:59:26] 2026-01-13 23:50:56,601 | INFO     | PID=16181 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-13 18:59:26] 2026-01-13 23:50:56,602 | INFO     | .. there are 19 such processes running
[2026-01-13 18:59:26] 2026-01-13 23:50:56,602 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 18:59:26] 2026-01-13 23:50:56,602 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 18:59:26] 2026-01-13 23:50:56,603 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 18:59:26] 2026-01-13 23:51:02,926 | INFO     | [monitor] cgroup control has ended
[2026-01-13 18:59:26] 2026-01-13 23:51:03,662 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140048833034048)>', '<ExcThread(monitor, started 140048481646336)>']
[2026-01-13 18:59:26] 2026-01-13 23:51:04,640 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 18:59:26] 2026-01-13 23:51:04,640 | INFO     | [monitor] control thread has ended
[2026-01-13 18:59:26] 2026-01-13 23:51:08,663 | INFO     | all workflow threads have been joined
[2026-01-13 18:59:26] 2026-01-13 23:51:08,663 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 18:59:26] 2026-01-13 23:51:08,663 | INFO     | traces error code: 0
[2026-01-13 18:59:26] 2026-01-13 23:51:08,663 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 18:59:26] 2026-01-13 23:51:08,779 [wrapper] ==== pilot stdout END ====
[2026-01-13 18:59:26] 2026-01-13 23:51:08,783 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 18:59:26] 2026-01-13 23:51:08,809 [wrapper] pilotpid: 16181
[2026-01-13 18:59:26] 2026-01-13 23:51:08,828 [wrapper] Pilot exit status: 0
[2026-01-13 18:59:26] 2026-01-13 23:51:08,848 [wrapper] pandaids: 6969150618
[2026-01-13 18:59:26] 2026-01-13 23:51:08,955 [wrapper] cleanup supervisor_pilot  488035 16182
[2026-01-13 18:59:26] 2026-01-13 23:51:08,973 [wrapper] Test setup, not cleaning
[2026-01-13 18:59:26] 2026-01-13 23:51:08,980 [wrapper] apfmon messages muted
[2026-01-13 18:59:26] 2026-01-13 23:51:08,983 [wrapper] ==== wrapper stdout END ====
[2026-01-13 18:59:26] 2026-01-13 23:51:08,986 [wrapper] ==== wrapper stderr END ====
[2026-01-13 18:59:26]  *** Error codes and diagnostics ***
[2026-01-13 18:59:26]     "exeErrorCode": 0,
[2026-01-13 18:59:26]     "exeErrorDiag": "",
[2026-01-13 18:59:26]     "pilotErrorCode": 0,
[2026-01-13 18:59:26]     "pilotErrorDiag": "",
[2026-01-13 18:59:26]  *** Listing of results directory ***
[2026-01-13 18:59:26] total 497012
[2026-01-13 18:59:26] -rw-r--r--. 1 boincer umatlas    579449 Jan 13 15:10 pilot3.tar.gz
[2026-01-13 18:59:26] -rw-r--r--. 1 boincer umatlas      5112 Jan 13 15:37 queuedata.json
[2026-01-13 18:59:26] -rwx------. 1 boincer umatlas     36322 Jan 13 15:38 runpilot2-wrapper.sh
[2026-01-13 18:59:26] -rw-r--r--. 1 boincer umatlas       100 Jan 13 16:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 18:59:26] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 13 16:20 run_atlas
[2026-01-13 18:59:26] -rw-r--r--. 1 boincer umatlas       105 Jan 13 16:20 job.xml
[2026-01-13 18:59:26] -rw-r--r--. 2 boincer umatlas 289930924 Jan 13 16:20 EVNT.48213181._000003.pool.root.1
[2026-01-13 18:59:26] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 16:20 start_atlas.sh
[2026-01-13 18:59:26] drwxrwx--x. 2 boincer umatlas      4096 Jan 13 16:20 shared
[2026-01-13 18:59:26] -rw-r--r--. 2 boincer umatlas    592413 Jan 13 16:20 input.tar.gz
[2026-01-13 18:59:26] -rw-r--r--. 1 boincer umatlas         0 Jan 13 16:20 boinc_lockfile
[2026-01-13 18:59:26] -rw-r--r--. 1 boincer umatlas      2617 Jan 13 16:20 pandaJob.out
[2026-01-13 18:59:26] -rw-------. 1 boincer umatlas        57 Jan 13 16:20 setup.sh.local
[2026-01-13 18:59:26] -rw-------. 1 boincer umatlas    997234 Jan 13 16:20 agis_schedconf.cvmfs.json
[2026-01-13 18:59:26] -rw-------. 1 boincer umatlas   1516246 Jan 13 16:20 agis_ddmendpoints.agis.ALL.json
[2026-01-13 18:59:26] drwx------. 5 boincer umatlas      4096 Jan 13 16:20 pilot3
[2026-01-13 18:59:26] -rw-------. 1 boincer umatlas 211831727 Jan 13 18:49 HITS.48213183._000069.pool.root.1
[2026-01-13 18:59:26] -rw-r--r--. 1 boincer umatlas       530 Jan 13 18:49 boinc_task_state.xml
[2026-01-13 18:59:26] -rw-------. 1 boincer umatlas      1032 Jan 13 18:50 memory_monitor_summary.json
[2026-01-13 18:59:26] -rw-------. 1 boincer umatlas    417110 Jan 13 18:50 log.48213183._000069.job.log.tgz.1
[2026-01-13 18:59:26] -rw-------. 1 boincer umatlas      7767 Jan 13 18:50 heartbeat.json
[2026-01-13 18:59:26] -rw-------. 1 boincer umatlas        95 Jan 13 18:50 pilot_heartbeat.json
[2026-01-13 18:59:26] -rw-------. 1 boincer umatlas      4823 Jan 13 18:51 pilotlog.txt
[2026-01-13 18:59:26] -rw-------. 1 boincer umatlas   1211813 Jan 13 18:51 log.48213183._000069.job.log.1
[2026-01-13 18:59:26] -rw-------. 1 boincer umatlas       357 Jan 13 18:51 output.list
[2026-01-13 18:59:26] -rw-r--r--. 1 boincer umatlas       620 Jan 13 18:51 runtime_log
[2026-01-13 18:59:26] -rw-------. 1 boincer umatlas   1648640 Jan 13 18:51 result.tar.gz
[2026-01-13 18:59:26] -rw-r--r--. 1 boincer umatlas      9342 Jan 13 18:51 runtime_log.err
[2026-01-13 18:59:26] -rw-------. 1 boincer umatlas       653 Jan 13 18:51 oP1MDmQL0z8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmt9hKDmhyJogn.diag
[2026-01-13 18:59:26] -rw-r--r--. 1 boincer umatlas      6957 Jan 13 18:57 init_data.xml
[2026-01-13 18:59:26] -rw-r--r--. 1 boincer umatlas      8192 Jan 13 18:59 boinc_mmap_file
[2026-01-13 18:59:26] -rw-r--r--. 1 boincer umatlas        27 Jan 13 18:59 wrapper_checkpoint.txt
[2026-01-13 18:59:26] -rw-r--r--. 1 boincer umatlas     21369 Jan 13 18:59 stderr.txt
[2026-01-13 18:59:26] HITS file was successfully produced:
[2026-01-13 18:59:26] -rw-------. 1 boincer umatlas 211831727 Jan 13 18:49 shared/HITS.pool.root.1
[2026-01-13 18:59:26]  *** Contents of shared directory: ***
[2026-01-13 18:59:26] total 492216
[2026-01-13 18:59:26] -rw-r--r--. 2 boincer umatlas 289930924 Jan 13 16:20 ATLAS.root_0
[2026-01-13 18:59:26] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 16:20 start_atlas.sh
[2026-01-13 18:59:26] -rw-r--r--. 2 boincer umatlas    592413 Jan 13 16:20 input.tar.gz
[2026-01-13 18:59:26] -rw-------. 1 boincer umatlas 211831727 Jan 13 18:49 HITS.pool.root.1
[2026-01-13 18:59:26] -rw-------. 1 boincer umatlas   1648640 Jan 13 18:51 result.tar.gz
18:59:28 (12078): run_atlas exited; CPU time 33273.236793
18:59:28 (12078): called boinc_finish(0)

</stderr_txt>
]]>

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